Citrus Sinensis ID: 022357

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
Protein Sequence
MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF
Secondary Structure (PSIPRED)
cccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHcccccccEEEEEEccccHHHHHHHHHHHHHHcccccEEEEccccccccccccHHHHccccccccccccccHHHccccHHHHHHHHccccccHHHHHHHHHHHHccccccEEEEEcccccccccccHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccHHHHHHHHcHHHcccccccccEEEEccEEccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEcccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHccccHHHHHHHHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHccccccEEEEEccHHHHHccccHHHHHHHcccccccHHHHHHHHHHHHHHHHcccHHHccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccEccccccccccEcHHHHcHHHHHHHcccccccccEEEEccccccc
Coil and Loop (DISEMBL)
MAEATKKYAVVtgsnkgigFETVRQLASKGITVVLTARDEKRGLEAVEKLKasgvdpelllfhqldisdlasVSSLADFIKTQFGKLDILANNAGIASVKFDMdafadsgyqitkgdaevdwskVCYQTYELAVECLKtnyygtkqtCEALipllelsdsprlvnLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKdyeegeianrgwcphssaykVSKAVINAYTRILAkrypkfcvncvcpgfvktdinFHAGILsveegaespvklallpdggptgrfflrkeeapf
Flexible Loop (DISEMBL)
maeatkkyavvtgsnkgigfetVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLlelsdsprLVNLSSYVSALKDLPEKARAvlgdvenlteerIEMVVKDYFKDYEEGEianrgwcphssAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFlrkeeapf
Low Complexity Region (SEG)
MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF
Disordered region (IsUnstruct)
*******YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALL******************
Disordered Region (DISOPRED)
****TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF
Disordered Region (DISEMBL)
MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF
Disordered Region (DISPRO)
****TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRK*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	298	2.2.26 [Sep-21-2011]
Q9M2E2	296	(+)-neomenthol dehydrogen	yes	no	0.983	0.989	0.574	5e-94
Q9ZUH5	296	Short-chain dehydrogenase	no	no	0.983	0.989	0.558	3e-89
B2X050	314	(+)-neomenthol dehydrogen	N/A	no	1.0	0.949	0.519	7e-82
A4UHT7	311	Salutaridine reductase OS	N/A	no	0.973	0.932	0.531	4e-80
Q6WAU1	314	(-)-isopiperitenone reduc	N/A	no	0.976	0.926	0.522	9e-75
P48758	277	Carbonyl reductase [NADPH	no	no	0.872	0.938	0.396	1e-43
Q8MI29	277	Carbonyl reductase [NADPH	N/A	no	0.845	0.909	0.394	1e-41
P47727	277	Carbonyl reductase [NADPH	no	no	0.872	0.938	0.379	2e-41
P16152	277	Carbonyl reductase [NADPH	yes	no	0.838	0.902	0.393	1e-40
Q5RCU5	277	Carbonyl reductase [NADPH	yes	no	0.838	0.902	0.39	2e-40

>sp|Q9M2E2|SDR1_ARATH (+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1

 Score =  344 bits (882), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 173/301 (57%), Positives = 218/301 (72%), Gaps = 8/301 (2%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-GVDPEL 59
           MAE T +YAVVTG+N+GIGFE  RQLAS+GI VVLT+RDE RGLEAVE LK    +  + 
Sbjct: 1   MAEETPRYAVVTGANRGIGFEICRQLASEGIRVVLTSRDENRGLEAVETLKKELEISDQS 60

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAE 119
           LLFHQLD++D AS++SLA+F+KTQFGKLDIL NNAGI  +  D +A      +   G   
Sbjct: 61  LLFHQLDVADPASITSLAEFVKTQFGKLDILVNNAGIGGIITDAEAL-----RAGAGKEG 115

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD-LPE 178
             W ++  +TYEL  EC+K NYYG K+ CEA IPLL+LSDSPR+VN+SS +  LK+ L E
Sbjct: 116 FKWDEIITETYELTEECIKINYYGPKRMCEAFIPLLKLSDSPRIVNVSSSMGQLKNVLNE 175

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
            A+ +L D ENLTEERI+ V+     D++EG +  + W    SAY VSKA +N YTR+LA
Sbjct: 176 WAKGILSDAENLTEERIDQVINQLLNDFKEGTVKEKNWAKFMSAYVVSKASLNGYTRVLA 235

Query: 239 KRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG-GPTGRFFLRKEEAP 297
           K++P+F VN VCPGFVKTD+NF  G+LSVEEGA SPV+LALLP    P+G FF RK+ + 
Sbjct: 236 KKHPEFRVNAVCPGFVKTDMNFKTGVLSVEEGASSPVRLALLPHQETPSGCFFSRKQVSE 295

Query: 298 F 298
           F
Sbjct: 296 F 296

Involved in basal resistance against pathogens.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 0EC: 8

>sp|Q9ZUH5|SDR2B_ARATH Short-chain dehydrogenase/reductase 2b OS=Arabidopsis thaliana GN=SDR2b PE=1 SV=1

 Score =  328 bits (841), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 168/301 (55%), Positives = 214/301 (71%), Gaps = 8/301 (2%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-GVDPEL 59
           MAE + +YA+VTG N+GIGFE  RQLA+KGI V+LT+RDEK+GLEAVE LK    +  + 
Sbjct: 1   MAEESPRYAIVTGGNRGIGFEICRQLANKGIRVILTSRDEKQGLEAVETLKKELEISDQS 60

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAE 119
           ++FHQLD+SD  SV+SLA+F+KT FGKLDIL NNAG+  V  D+DA      +   G   
Sbjct: 61  IVFHQLDVSDPVSVTSLAEFVKTHFGKLDILINNAGVGGVITDVDAL-----RAGTGKEG 115

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDL-PE 178
             W +   +TYELA EC+K NYYG K+ CEA IPLL+LSDSPR++N+SS++  +K+L  E
Sbjct: 116 FKWEETITETYELAEECIKINYYGPKRMCEAFIPLLQLSDSPRIINVSSFMGQVKNLVNE 175

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
            A+ +L D ENLTE RI+ V+     D +E     + W    SAY VSKA +NAYTRILA
Sbjct: 176 WAKGILSDAENLTEVRIDQVINQLLNDLKEDTAKTKYWAKVMSAYVVSKAGLNAYTRILA 235

Query: 239 KRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG-GPTGRFFLRKEEAP 297
           K++P+  VN VCPGFVKTD+NF  GILSVEEGA SPV+LALLP    P+G FF RK+ + 
Sbjct: 236 KKHPEIRVNSVCPGFVKTDMNFKTGILSVEEGASSPVRLALLPHQESPSGCFFDRKQVSE 295

Query: 298 F 298
           F
Sbjct: 296 F 296

Arabidopsis thaliana (taxid: 3702)

>sp|B2X050|MNR1_CAPAN (+)-neomenthol dehydrogenase OS=Capsicum annuum GN=MNR1 PE=1 SV=1

 Score =  303 bits (777), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 163/314 (51%), Positives = 213/314 (67%), Gaps = 16/314 (5%)

Query: 1   MAEATK--KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA-SGVDP 57
           MAE T   +YAVVTG NKGIG+ET RQLASKG+ VVLT+RDEK+G+EA+E+LK  S    
Sbjct: 1   MAEKTTSTRYAVVTGGNKGIGYETCRQLASKGVVVVLTSRDEKKGIEAIERLKEESNFTD 60

Query: 58  ELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDA---------FAD 108
           E +LFHQLDI D AS+SSL + IKT+FG+LDIL NNAGI+ V  + D          +  
Sbjct: 61  EHILFHQLDIMDPASISSLVNLIKTKFGRLDILINNAGISGVMVEGDVQVLKEILERYIS 120

Query: 109 SGYQITKGDAEVDWSKV---CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN 165
             +   +   E  W+K        YEL  EC++TNYYG K+  EA IPLL+LS+SPR+VN
Sbjct: 121 IVFTEDENGEEGGWTKSGPGSVTNYELTKECIETNYYGAKRMTEAFIPLLQLSNSPRIVN 180

Query: 166 LSSYVSALKDLPEK-ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYK 224
           ++S +  LK L  K A  VL D ++LTEE+++ VV ++ KD+ E    ++GW  + +AYK
Sbjct: 181 VASSMGKLKLLCNKWAIEVLRDADSLTEEKVDQVVNEFLKDFTEKSTESKGWPSYFTAYK 240

Query: 225 VSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGG 284
           VSKA + AYTR+LA +YP F +N VCPG+ KTD+N + G L+  EGAES V LALLP+ G
Sbjct: 241 VSKASLIAYTRVLATKYPNFRINSVCPGYCKTDVNANTGSLTAGEGAESLVNLALLPNDG 300

Query: 285 PTGRFFLRKEEAPF 298
           P+G FF RKE   F
Sbjct: 301 PSGLFFYRKEVTFF 314

Involved in basal resistance against pathogens.

Capsicum annuum (taxid: 4072)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 8

>sp|A4UHT7|SALR_PAPBR Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1

 Score =  298 bits (762), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 160/301 (53%), Positives = 204/301 (67%), Gaps = 11/301 (3%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + AVVTG NKGIGFE  +QL+S GI VVLT RD  RGLEAVEKLK S  + E ++FHQLD
Sbjct: 13  RCAVVTGGNKGIGFEICKQLSSSGIMVVLTCRDVTRGLEAVEKLKNS--NHENVVFHQLD 70

Query: 67  ISD-LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV----- 120
           ++D + ++SSLADFIK +FGKLDIL NNAG+A    D D F      I +   EV     
Sbjct: 71  VTDPITTMSSLADFIKARFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEEVVKIYE 130

Query: 121 --DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP- 177
             +  ++  +TYELA ECLK NYYG K   E L+PLL+LSDSPR+VN+SS   +LK +  
Sbjct: 131 KPEAQELMSETYELAEECLKINYYGVKSVTEVLLPLLQLSDSPRIVNVSSSTGSLKYVSN 190

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
           E A  +LGD + LTEERI+MVV    KD++E  I   GW    +AY  SKA +NAYTR+L
Sbjct: 191 ETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVL 250

Query: 238 AKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAP 297
           AK+ PKF VNCVCPG VKT++N+  G  + +EGA+  V++AL PD GP+G F+   E + 
Sbjct: 251 AKKIPKFQVNCVCPGLVKTEMNYGIGNYTADEGAKHVVRIALFPDDGPSGFFYDCSELSA 310

Query: 298 F 298
           F
Sbjct: 311 F 311

Involved in biosynthesis of morphinan-type benzylisoquinoline alkaloids. Catalyzes the stereospecific conversion of salutaridine to salutaridinol.

Papaver bracteatum (taxid: 215227)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 4

EC: 8

>sp|Q6WAU1|IPIPR_MENPI (-)-isopiperitenone reductase OS=Mentha piperita PE=1 SV=1

 Score =  280 bits (716), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 161/308 (52%), Positives = 215/308 (69%), Gaps = 17/308 (5%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPEL 59
           MAE  ++YA+VTG+NKGIGFE  RQLA KGI V+LT+R+EKRGLEA +KL K   V    
Sbjct: 1   MAE-VQRYALVTGANKGIGFEICRQLAEKGIIVILTSRNEKRGLEARQKLLKELNVSENR 59

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKF--DMDAFAD------SGY 111
           L+FHQLD++DLASV+++A FIK++FGKLDIL NNAG++ V+   D+  F +         
Sbjct: 60  LVFHQLDVTDLASVAAVAVFIKSKFGKLDILVNNAGVSGVEMVGDVSVFNEYIEADFKAL 119

Query: 112 QITKGDAEVD------WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN 165
           Q  +  A+ +       +    + +E A +C+ TNYYG K+  +ALIPLL+LS SPR+VN
Sbjct: 120 QALEAGAKEEPPFKPKANGEMIEKFEGAKDCVVTNYYGPKRLTQALIPLLQLSPSPRIVN 179

Query: 166 LSSYVSALKD-LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYK 224
           +SS   +L     E A+ VLGD + LTEER++ VV+ + KD +EG++    W PH +A +
Sbjct: 180 VSSSFGSLLLLWNEWAKGVLGDEDRLTEERVDEVVEVFLKDIKEGKLEESQWPPHFAAER 239

Query: 225 VSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGG 284
           VSKA +NAYT+I AK+YP F +N +CPG+ KTDI FHAG LSV E A+ PVKLALLPDGG
Sbjct: 240 VSKAALNAYTKIAAKKYPSFRINAICPGYAKTDITFHAGPLSVAEAAQVPVKLALLPDGG 299

Query: 285 PTGRFFLR 292
           P+G FF R
Sbjct: 300 PSGCFFPR 307

Monoterpene synthase that catalyzes the specific reduction of the 1(2)-double bond of (-)-isopiperitenone to produce (+)-cis-isopulegone. Does not catalyze the reverse reaction. Unable to reduce (+)-pulegone, (+)-cis-isopulegone, (-)-menthone or the 1,2-double bond of (-)-carvone. Able to utilize NADH with 20% the efficiency of NADPH.

Mentha piperita (taxid: 34256)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 8

EC: 2

>sp|P48758|CBR1_MOUSE Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3

 Score =  177 bits (448), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/310 (39%), Positives = 175/310 (56%), Gaps = 50/310 (16%)

Query: 4   ATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +++  A+VTG+NKGIGF   R L  K    VVL ARDE+RG  AV+KL+A G+ P    F
Sbjct: 3   SSRPVALVTGANKGIGFAITRDLCRKFSGDVVLAARDEERGQTAVQKLQAEGLSPR---F 59

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDW 122
           HQLDI +  S+ +L DF+  ++G LD+L NNAGIA    D     D+ + I    AEV  
Sbjct: 60  HQLDIDNPQSIRALRDFLLKEYGGLDVLVNNAGIAFKVND-----DTPFHI---QAEV-- 109

Query: 123 SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS--ALKD----L 176
                         +KTN++GT+  C+ L+PL++     R+VN+SS VS  ALK+    L
Sbjct: 110 -------------TMKTNFFGTRDVCKELLPLIKPQG--RVVNVSSMVSLRALKNCRLEL 154

Query: 177 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI 236
            +K R+     E +TEE +  ++  + +D ++G  A  GW   +SAY V+K  +   +RI
Sbjct: 155 QQKFRS-----ETITEEELVGLMNKFVEDTKKGVHAEEGW--PNSAYGVTKIGVTVLSRI 207

Query: 237 LA------KRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG--GPTGR 288
           LA      +R  K  +N  CPG+V+TD+       S EEGAE+PV LALLP    GP G+
Sbjct: 208 LARKLNEQRRGDKILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQ 267

Query: 289 FFLRKEEAPF 298
           F   K+  P+
Sbjct: 268 FVQDKKVEPW 277

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q8MI29|CBR1_MACFA Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis GN=CBR1 PE=2 SV=1

 Score =  170 bits (430), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/302 (39%), Positives = 165/302 (54%), Gaps = 50/302 (16%)

Query: 7   KYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           + A+VTGSNKGIG   VR L       VVLTARD  RG  AV++L+A G+ P    FHQL
Sbjct: 6   RVALVTGSNKGIGLAIVRDLCRLFSGEVVLTARDVARGQAAVQQLQAEGLSPR---FHQL 62

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           DI DL S+ +L DF+  ++G LD+L NNAGIA    D   F           AEV     
Sbjct: 63  DIDDLQSIRTLRDFLLKEYGGLDVLVNNAGIAFKVADPTPFHI--------QAEV----- 109

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS--ALK----DLPEK 179
                      +KTN++GT+  C  L+PL++     R+VN+SS +S  ALK    +L +K
Sbjct: 110 ----------TMKTNFFGTRDVCTELLPLIK--PQGRVVNISSMMSLRALKSCSPELQQK 157

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
            R+     E +TEE +  ++  + +D ++G     GW   SSAY V+K  +   +RI A+
Sbjct: 158 FRS-----ETITEEELVGLMNKFAEDTKKGVHQKEGW--PSSAYGVTKIGVTVLSRIHAR 210

Query: 240 RYP------KFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLP--DGGPTGRFFL 291
           +        K  +N  CPG+V+TD+   +   S EEGAE+PV LALLP    GP G+F +
Sbjct: 211 KLSEQRKGDKILLNACCPGWVRTDMAGPSATKSPEEGAETPVYLALLPLDAEGPHGQFVM 270

Query: 292 RK 293
            K
Sbjct: 271 EK 272

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|P47727|CBR1_RAT Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus GN=Cbr1 PE=1 SV=2

 Score =  169 bits (428), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/306 (37%), Positives = 167/306 (54%), Gaps = 46/306 (15%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           +  A+VTG+NKGIGF  VR L  K +  VVLTARDE RG EAV++L+  G+ P    FHQ
Sbjct: 5   RPVALVTGANKGIGFAIVRDLCRKFLGDVVLTARDESRGHEAVKQLQTEGLSPR---FHQ 61

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           LDI +  S+ +L DF+  ++G L++L NNAGIA    D   F           AEV    
Sbjct: 62  LDIDNPQSIRALRDFLLQEYGGLNVLVNNAGIAFKVVDPTPFHIQ--------AEV---- 109

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK----DLPEKA 180
                       +KTN++GT+  C+ L+P+++       V+ S  + ALK    +L +K 
Sbjct: 110 -----------TMKTNFFGTQDVCKELLPIIKPQGRVVNVSSSVSLRALKSCSPELQQKF 158

Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK- 239
           R+     E +TEE +  ++  + +D ++G  A  GW   +SAY V+K  +   +RI A+ 
Sbjct: 159 RS-----ETITEEELVGLMNKFIEDAKKGVHAKEGW--PNSAYGVTKIGVTVLSRIYARK 211

Query: 240 -----RYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLR 292
                R  K  +N  CPG+V+TD+       S EEGAE+PV LALLP G  GP G+F   
Sbjct: 212 LNEERREDKILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPGAEGPHGQFVQD 271

Query: 293 KEEAPF 298
           K+  P+
Sbjct: 272 KKVEPW 277

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|P16152|CBR1_HUMAN Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3

 Score =  167 bits (422), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/300 (39%), Positives = 162/300 (54%), Gaps = 50/300 (16%)

Query: 9   AVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
           A+VTG NKGIG   VR L       VVLTARD  RG  AV++L+A G+ P    FHQLDI
Sbjct: 8   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPR---FHQLDI 64

Query: 68  SDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCY 127
            DL S+ +L DF++ ++G LD+L NNAGIA    D   F           AEV       
Sbjct: 65  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQ--------AEV------- 109

Query: 128 QTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS--ALK----DLPEKAR 181
                    +KTN++GT+  C  L+PL++     R+VN+SS +S  ALK    +L +K R
Sbjct: 110 --------TMKTNFFGTRDVCTELLPLIKPQG--RVVNVSSIMSVRALKSCSPELQQKFR 159

Query: 182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 241
           +     E +TEE +  ++  + +D ++G     GW   SSAY V+K  +   +RI A++ 
Sbjct: 160 S-----ETITEEELVGLMNKFVEDTKKGVHQKEGW--PSSAYGVTKIGVTVLSRIHARKL 212

Query: 242 P------KFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRK 293
                  K  +N  CPG+V+TD+       S EEGAE+PV LALLP    GP G+F   K
Sbjct: 213 SEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK 272

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q5RCU5|CBR1_PONAB Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3

 Score =  166 bits (420), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/300 (39%), Positives = 162/300 (54%), Gaps = 50/300 (16%)

Query: 9   AVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
           A+VTG NKGIG   VR L       VVLTARD  RG  AV++L+A G+ P    FHQLDI
Sbjct: 8   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVARGQAAVQQLQAEGLSPR---FHQLDI 64

Query: 68  SDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCY 127
            DL S+ +L DF++ ++G LD+L NNAGIA    D   F           AEV       
Sbjct: 65  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQ--------AEV------- 109

Query: 128 QTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS--ALK----DLPEKAR 181
                    +KTN++GT+  C  L+PL++     R+VN+SS +S  ALK    +L +K R
Sbjct: 110 --------TMKTNFFGTRDVCTELLPLIKPQG--RVVNVSSIMSVRALKSCSPELQQKFR 159

Query: 182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 241
           +     E +TEE +  ++  + +D ++G     GW   SSAY V+K  +   +RI A++ 
Sbjct: 160 S-----ETITEEELVGLMNKFVEDTKKGVHQKEGW--PSSAYGVTKIGVTVLSRIHARKL 212

Query: 242 P------KFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRK 293
                  +  +N  CPG+V+TD+       S EEGAE+PV LALLP    GP G+F   K
Sbjct: 213 SEQRKGDRILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK 272

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	298
224064013	296	predicted protein [Populus trichocarpa]	0.983	0.989	0.624	1e-103
359489616	297	PREDICTED: (+)-neomenthol dehydrogenase-	0.983	0.986	0.599	3e-99
225454097	297	PREDICTED: (+)-neomenthol dehydrogenase	0.989	0.993	0.6	6e-99
147800243	298	hypothetical protein VITISV_002460 [Viti	0.993	0.993	0.6	3e-98
297745216	298	unnamed protein product [Vitis vinifera]	0.993	0.993	0.586	1e-97
359489600	539	PREDICTED: (+)-neomenthol dehydrogenase	0.989	0.547	0.578	5e-95
356566889	528	PREDICTED: LOW QUALITY PROTEIN: (+)-neom	0.983	0.554	0.591	3e-94
363806746	296	uncharacterized protein LOC100803877 [Gl	0.989	0.996	0.571	1e-93
356530092	294	PREDICTED: (+)-neomenthol dehydrogenase-	0.979	0.993	0.573	2e-93
388498086	294	unknown [Lotus japonicus]	0.979	0.993	0.56	3e-93

>gi|224064013|ref|XP_002301348.1| predicted protein [Populus trichocarpa] gi|222843074|gb|EEE80621.1| predicted protein [Populus trichocarpa]

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/301 (62%), Positives = 238/301 (79%), Gaps = 8/301 (2%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MAEATK YAVVTG+NKGIGFE  RQLASKGI VVLT+R+EKRGLE+V+KLK SG+  + +
Sbjct: 1   MAEATKSYAVVTGANKGIGFEICRQLASKGIVVVLTSRNEKRGLESVQKLKESGLS-DFV 59

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAF--ADSGYQITKGDA 118
           +FHQLD++D+ S++SLADFIK+QFGKLDIL NNAG+  VK D DA   A SG    K  A
Sbjct: 60  VFHQLDVADINSIASLADFIKSQFGKLDILVNNAGVGGVKTDGDALKAAISG----KEGA 115

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP- 177
           +++WS+   QT+ELA ECL+ NYYG K+  EALIPLL+LSDSPR+VN+SS +  LK +  
Sbjct: 116 KINWSEFITQTWELAEECLRINYYGAKRMAEALIPLLQLSDSPRIVNVSSSMGNLKGVSN 175

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
           E A+ VLGD ENLTEER++ V+  Y +D++EG +   GW    SAY +SKA ++A+TR+L
Sbjct: 176 EWAKGVLGDAENLTEERVDEVLSKYLEDFKEGSLETEGWPAMMSAYILSKAAMSAFTRVL 235

Query: 238 AKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAP 297
           AK++P FCVNCVCPG+VKTDINF+ GI  VEEGAE+ V+LALLP+GGP+G FF R EE+P
Sbjct: 236 AKKHPTFCVNCVCPGYVKTDINFNTGIRPVEEGAENVVRLALLPNGGPSGCFFDRTEESP 295

Query: 298 F 298
           F
Sbjct: 296 F 296

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489616|ref|XP_002267348.2| PREDICTED: (+)-neomenthol dehydrogenase-like [Vitis vinifera] gi|297745217|emb|CBI40297.3| unnamed protein product [Vitis vinifera]

 Score =  367 bits (942), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 181/302 (59%), Positives = 233/302 (77%), Gaps = 9/302 (2%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MAEA  +YAVVTG+NKGIG E  RQLA+ G+ VVLTARDEKRGLEA+E LK SG+    L
Sbjct: 1   MAEAATRYAVVTGANKGIGLEICRQLAANGVRVVLTARDEKRGLEALESLKGSGLSN--L 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIA-SVKFDMDAFADSGYQITKGDA- 118
           +FHQLD+ D AS+SS+ADFIK QFGKLDIL NNAGI  +V  D DA      +I   +A 
Sbjct: 59  VFHQLDVGDPASISSIADFIKAQFGKLDILVNNAGIGGTVVTDPDALRS---RIASAEAV 115

Query: 119 -EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
            +V+W ++  + +EL  ECLK NYYG K+  EA IPLL+LSDSPR+VN+SS +  L+++ 
Sbjct: 116 GKVNWKEIMIEPFELVEECLKINYYGPKRMIEAFIPLLQLSDSPRIVNVSSSMGKLQNIK 175

Query: 178 -EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI 236
            E A+AVL D ENLTEER++ V+  + KD++EG +  + W  + SAY VSKA +NAYTRI
Sbjct: 176 NEWAKAVLSDAENLTEERVDEVLNQFLKDFKEGLLEAKSWPSNLSAYTVSKAALNAYTRI 235

Query: 237 LAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEA 296
           LA++YP  C+NCVCPGFVKTD+N+++GIL++EEGAESPV+LALLPDGGP+G+FF+RKE +
Sbjct: 236 LARKYPTLCINCVCPGFVKTDLNYNSGILTIEEGAESPVRLALLPDGGPSGQFFVRKEVS 295

Query: 297 PF 298
            F
Sbjct: 296 EF 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454097|ref|XP_002267820.1| PREDICTED: (+)-neomenthol dehydrogenase [Vitis vinifera] gi|297745218|emb|CBI40298.3| unnamed protein product [Vitis vinifera]

 Score =  366 bits (940), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 180/300 (60%), Positives = 231/300 (77%), Gaps = 5/300 (1%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MAEA  +YAVVTG+NKGIG E  RQLA+ G+ VVLTARDEKRGLEA+E LK SG+    L
Sbjct: 1   MAEAATRYAVVTGANKGIGLEICRQLAANGVRVVLTARDEKRGLEALESLKGSGLSN--L 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIA-SVKFDMDAFADSGYQITKGDAE 119
           +FHQLD+ D AS+SS+ADFIK QFGKLDIL NNAGI  +V  D DA   S Y   +   +
Sbjct: 59  VFHQLDVGDPASISSIADFIKAQFGKLDILVNNAGIGGTVVTDPDAL-RSRYASAEAVGK 117

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP-E 178
           V+W ++  + +EL  ECLK NYYG K+  EA IPLL+LSDSPR+VN+SS +  L+++  E
Sbjct: 118 VNWKEIMIEPFELVEECLKINYYGPKRMIEAFIPLLQLSDSPRIVNVSSSMGKLQNIKNE 177

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
            A+AVL D ENLTEER++ V+  + KD++EG +  + W  + SAY VSKA +NAYTRILA
Sbjct: 178 WAKAVLSDAENLTEERVDEVLNQFLKDFKEGLLEAKSWPSNVSAYTVSKAALNAYTRILA 237

Query: 239 KRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 298
           ++ P  C+NCVCPGFVKTD+N+++GIL++EEGAESPV+LALLPDGGP+G+FF+RKE + F
Sbjct: 238 RKCPTLCINCVCPGFVKTDLNYNSGILTIEEGAESPVRLALLPDGGPSGQFFVRKEVSEF 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147800243|emb|CAN77657.1| hypothetical protein VITISV_002460 [Vitis vinifera] gi|297745213|emb|CBI40293.3| unnamed protein product [Vitis vinifera]

 Score =  364 bits (934), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 180/300 (60%), Positives = 229/300 (76%), Gaps = 4/300 (1%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MAEATKKYAVVTG+NKGIG    R+LA+ G+TVVLTARDEKRG+EA+E LK SG+    +
Sbjct: 1   MAEATKKYAVVTGANKGIGLGICRELAANGVTVVLTARDEKRGVEALESLKGSGLSN--V 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAG-IASVKFDMDAFADSGYQITKGDAE 119
           +FHQLD+   AS++SLADFIKTQFGKLDIL NNAG I  +  D DA   +         E
Sbjct: 59  IFHQLDVGQPASIASLADFIKTQFGKLDILVNNAGVIGMIVTDPDALRSAIAAAQGRIGE 118

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP-E 178
           V+W+++  Q  E+A ECLK NYYG K+  EAL+PLL+LSD PR+VN+SS    L+++P E
Sbjct: 119 VNWNEIVIQPLEMAEECLKINYYGPKRMIEALMPLLQLSDLPRIVNVSSSGGKLQNIPNE 178

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
            A+ VL D ENLTEE +  V+  + KD++EG +  + W    SAY+VSKA +NAYTR+LA
Sbjct: 179 WAKGVLSDAENLTEETVIEVLNQFLKDFKEGLLEAKSWPTFFSAYRVSKAALNAYTRLLA 238

Query: 239 KRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 298
           K+YP FC+NCVCPG+VKTDIN+++GIL+VEEGAESPV+LALLPDGGP+G FF+RKE + F
Sbjct: 239 KKYPTFCINCVCPGYVKTDINYNSGILTVEEGAESPVRLALLPDGGPSGLFFVRKEVSDF 298

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745216|emb|CBI40296.3| unnamed protein product [Vitis vinifera]

 Score =  362 bits (928), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 176/300 (58%), Positives = 229/300 (76%), Gaps = 4/300 (1%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MAEAT +YAV+TG+NKGIG E  RQLA+ G+ VVLTARDEKRG+EA+E LK SG+    +
Sbjct: 1   MAEATNRYAVITGANKGIGLEICRQLAANGVIVVLTARDEKRGVEALESLKGSGLSN--V 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGI-ASVKFDMDAFADSGYQITKGDAE 119
           +FHQLD+ D AS++SLADFIKTQFGKLDIL NNAGI  ++  D D F            +
Sbjct: 59  VFHQLDVGDPASIASLADFIKTQFGKLDILVNNAGIIGTLVTDPDGFRLGIPAARAKVGK 118

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP-E 178
           ++W ++  + +ELA EC+K NYYG K+  E LIPLL LSDSPR+VN+SS +  L+++  E
Sbjct: 119 INWKEIMIEPFELAEECMKINYYGPKRMSEVLIPLLRLSDSPRIVNVSSSMGRLQNIKNE 178

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
            A+ VL D ENLTEER++ V+  + KD++EG +  + W    SA  VSK+ +NAYTRI+A
Sbjct: 179 WAKGVLSDAENLTEERVDEVLNVFLKDFKEGSLEAKSWPTFLSANTVSKSALNAYTRIMA 238

Query: 239 KRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 298
           K+YP FC+NCVCPGFVKTDIN+++GIL+VEEGAESPV+LALLPDGGP+G+FFL+KE + F
Sbjct: 239 KKYPTFCINCVCPGFVKTDINYNSGILTVEEGAESPVRLALLPDGGPSGQFFLQKEVSEF 298

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489600|ref|XP_002267232.2| PREDICTED: (+)-neomenthol dehydrogenase [Vitis vinifera]

 Score =  353 bits (906), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 173/299 (57%), Positives = 226/299 (75%), Gaps = 4/299 (1%)

Query: 2   AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLL 61
           AE   +YAV+TG+NKGIG E  RQLA+ G+ VVLTARDEKRG+EA+E LK SG+    ++
Sbjct: 243 AEYLFRYAVITGANKGIGLEICRQLAANGVIVVLTARDEKRGVEALESLKGSGLSN--VV 300

Query: 62  FHQLDISDLASVSSLADFIKTQFGKLDILANNAGI-ASVKFDMDAFADSGYQITKGDAEV 120
           FHQLD+ D AS++SLADFIKTQFGKLDIL NNAGI  ++  D D F            ++
Sbjct: 301 FHQLDVGDPASIASLADFIKTQFGKLDILVNNAGIIGTLVTDPDGFRLGIPAARAKVGKI 360

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP-EK 179
           +W ++  + +ELA EC+K NYYG K+  E LIPLL LSDSPR+VN+SS +  L+++  E 
Sbjct: 361 NWKEIMIEPFELAEECMKINYYGPKRMSEVLIPLLRLSDSPRIVNVSSSMGRLQNIKNEW 420

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
           A+ VL D ENLTEER++ V+  + KD++EG +  + W    SA  VSK+ +NAYTRI+AK
Sbjct: 421 AKGVLSDAENLTEERVDEVLNVFLKDFKEGSLEAKSWPTFLSANTVSKSALNAYTRIMAK 480

Query: 240 RYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 298
           +YP FC+NCVCPGFVKTDIN+++GIL+VEEGAESPV+LALLPDGGP+G+FFL+KE + F
Sbjct: 481 KYPTFCINCVCPGFVKTDINYNSGILTVEEGAESPVRLALLPDGGPSGQFFLQKEVSEF 539

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566889|ref|XP_003551658.1| PREDICTED: LOW QUALITY PROTEIN: (+)-neomenthol dehydrogenase-like [Glycine max]

 Score =  350 bits (899), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 177/299 (59%), Positives = 223/299 (74%), Gaps = 6/299 (2%)

Query: 2   AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLL 61
           A +  + AVVTG+NKGIGF   +QL S GITVVLTARDEKRGLEAVEKLK  GV  +++ 
Sbjct: 234 AASVVRNAVVTGANKGIGFGICKQLVSNGITVVLTARDEKRGLEAVEKLKEFGVSDQVV- 292

Query: 62  FHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVD 121
           FHQLD++D  S+ SLA+FIKTQFGKLDIL NNAGI     D DA A +G   ++  A VD
Sbjct: 293 FHQLDVTDPKSIESLANFIKTQFGKLDILVNNAGIHGAYVDRDALAAAGS--SEKVANVD 350

Query: 122 WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK-A 180
           W K+  + +E A   ++TNYYG K  CEALIPLLELS +PR+VN+SS +  L+ +P   A
Sbjct: 351 WRKISTENFEAAEAGIRTNYYGVKLMCEALIPLLELSGTPRIVNVSSSMGKLEKIPNAWA 410

Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHS-SAYKVSKAVINAYTRILAK 239
           R  L D E+LTEE+++ V+  + KD++EG +  +GW PH+ SAY VSKA + AYTRILAK
Sbjct: 411 RGALSDAESLTEEKVDEVLNQFLKDFKEGSLETKGW-PHAFSAYIVSKAALTAYTRILAK 469

Query: 240 RYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 298
           +YP FC+N VCPGFVKTD+N++ G LSV+EGAES V+LALLP+GGP+G FF R E APF
Sbjct: 470 KYPSFCINAVCPGFVKTDLNYNTGYLSVDEGAESVVRLALLPNGGPSGLFFSRSEVAPF 528

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806746|ref|NP_001242019.1| uncharacterized protein LOC100803877 [Glycine max] gi|255640098|gb|ACU20340.1| unknown [Glycine max]

 Score =  348 bits (894), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 171/299 (57%), Positives = 223/299 (74%), Gaps = 4/299 (1%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MAEATK YAVVTG+NKGIGF   +QLAS GITVVLTARDEKRGL+AVEKL+  G+   + 
Sbjct: 1   MAEATKGYAVVTGANKGIGFAICKQLASNGITVVLTARDEKRGLQAVEKLQELGLSGHVG 60

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
            FHQLD++D A + SLADFI+ +FGKLDIL NNAGI   ++D +A A +G  I +    +
Sbjct: 61  -FHQLDVTDPAGIRSLADFIRNKFGKLDILVNNAGIPGAQWDGEALAAAG--IMENAGRI 117

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK- 179
           DWSK+   TY+LA   +KTNYYG K+  +ALIPLL+ SDSP++VN+SS +  L+ +P   
Sbjct: 118 DWSKIVTDTYKLAEAGVKTNYYGAKELTKALIPLLQFSDSPKIVNVSSSMGRLEHIPNGW 177

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
            + VL DVENLTEE+I+ ++ ++ KD++EG +  +GW     AY VSKA +NA+TRILAK
Sbjct: 178 PKEVLSDVENLTEEKIDDILNEFLKDFKEGSLETKGWPLAMPAYSVSKAALNAFTRILAK 237

Query: 240 RYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 298
            YP F +N +CPG+VKTDIN + G L+ +EGAE+ V+LALLPDG P+G+FF R EE PF
Sbjct: 238 NYPSFYINALCPGYVKTDINSNTGFLTPDEGAEAAVRLALLPDGSPSGQFFFRGEEKPF 296

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530092|ref|XP_003533618.1| PREDICTED: (+)-neomenthol dehydrogenase-like [Glycine max]

 Score =  348 bits (893), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 172/300 (57%), Positives = 228/300 (76%), Gaps = 8/300 (2%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M E  K+YAVVTG+NKGIGF   ++LAS GI VVLTARDEK G +AVEKLK  G+  +LL
Sbjct: 1   MGEEAKRYAVVTGANKGIGFGMCKKLASSGIVVVLTARDEKNGFKAVEKLKEFGLS-DLL 59

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKF-DMDAFADSGYQITKGDAE 119
           +FHQLD+ D ASVS+LADFIKT+FGKLDIL NNA +   K  D DAF        +   +
Sbjct: 60  VFHQLDVDDPASVSALADFIKTEFGKLDILVNNAAVTGGKLLDADAFLRK-----RNGEQ 114

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP-E 178
           +DW++V Y+TYELA +C++TN+YG K+  EAL+PLL+LS SPR+VN+SS     K++P E
Sbjct: 115 IDWNEVGYETYELAEQCVETNFYGVKRVTEALLPLLQLSTSPRIVNISSRAGLFKNIPNE 174

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
            AR +L D+ENLT E+I+ V++++ KD++EG +  +GW   +SAY +SKA +NAYTRI+A
Sbjct: 175 WARTMLSDIENLTREKIDGVLEEFQKDFKEGSLEIKGWPAFASAYTMSKAALNAYTRIMA 234

Query: 239 KRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 298
           K+YP+F +N VCPGFVKTD+N + G LS++EGAE+PV LALLP+GGP+G FF + E  PF
Sbjct: 235 KKYPRFHINSVCPGFVKTDMNNNTGQLSIDEGAETPVLLALLPNGGPSGCFFHQGEVIPF 294

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388498086|gb|AFK37109.1| unknown [Lotus japonicus]

 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 168/300 (56%), Positives = 224/300 (74%), Gaps = 8/300 (2%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MAEAT +YAVVTG+NKGIGF   +QL+S GITVVLTARDEKRGLEAVE+LK  G     +
Sbjct: 1   MAEATARYAVVTGANKGIGFAICKQLSSNGITVVLTARDEKRGLEAVEELKGLG----HV 56

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
           +FHQLD++D AS+ S A+FI+T FGKLDIL NNAG +    D +A A +   I +   ++
Sbjct: 57  VFHQLDVTDPASIGSFANFIQTHFGKLDILVNNAGASGAHVDGEALAAA--NIVENGGQI 114

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE-K 179
           DW K+  + YEL   CLKTNYYG K+  +ALIPLL++S SP++VN+SS +  L+++P+ +
Sbjct: 115 DWRKIVTENYELTEACLKTNYYGVKELTKALIPLLQISGSPKIVNVSSSMGRLENIPDGR 174

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
            + V+ DVENLTEE+I+  + +Y KD++EG +  +GW     AY +SK  +NAYTRILAK
Sbjct: 175 PKQVIVDVENLTEEKIDEFLNEYLKDFKEGSLEAKGWPHIMYAYTISKVALNAYTRILAK 234

Query: 240 RYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG-GPTGRFFLRKEEAPF 298
           +YP FC+N VCPG+VKTDIN++ G+L+ +EGAE+ V+LALLPDG  P+G FF R EE PF
Sbjct: 235 KYPSFCINAVCPGYVKTDINYNTGLLTPDEGAEAAVRLALLPDGSSPSGLFFYRSEEKPF 294

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	298
TAIR|locus:2198230	295	AT1G01800 [Arabidopsis thalian	0.979	0.989	0.545	1.8e-80
UNIPROTKB|Q6WAU1	314	Q6WAU1 "(-)-isopiperitenone re	0.976	0.926	0.535	5.7e-75
TAIR|locus:2157408	314	AT5G51030 [Arabidopsis thalian	0.879	0.834	0.419	2e-49
UNIPROTKB|J9P7P2	277	CBR1 "Uncharacterized protein"	0.510	0.548	0.384	3.2e-43
UNIPROTKB|Q3T0T9	286	MGC127133 "Uncharacterized pro	0.308	0.321	0.525	2.8e-42
UNIPROTKB|E2RIN9	262	LOC480785 "Uncharacterized pro	0.513	0.583	0.374	1.1e-31
TAIR|locus:2097508	302	AT3G59710 [Arabidopsis thalian	0.956	0.943	0.303	2.9e-25
UNIPROTKB|L7N0B8	144	L7N0B8 "Uncharacterized protei	0.291	0.604	0.505	5.4e-23
RGD|2286	277	Cbr1 "carbonyl reductase 1" [R	0.704	0.758	0.336	1.6e-22
MGI|MGI:88284	277	Cbr1 "carbonyl reductase 1" [M	0.704	0.758	0.352	2.6e-22

TAIR|locus:2198230 AT1G01800 [Arabidopsis thaliana (taxid:3702)]

 Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
 Identities = 162/297 (54%), Positives = 213/297 (71%)

Query:     4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA-SGVDPELLLF 62
             A  + AVVTGSNKGIGFE  RQLA+ GITVVLTARDE +GL AV+KLK  +G   + + F
Sbjct:     2 ADPRVAVVTGSNKGIGFEICRQLANNGITVVLTARDENKGLAAVQKLKTENGFSDQAISF 61

Query:    63 HQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDW 122
             H LD+S+  +++SLA F+KT+FGKLDIL NNAG+     ++D       QI +  A  D 
Sbjct:    62 HPLDVSNPDTIASLAAFVKTRFGKLDILVNNAGVGGANVNVDVLKA---QIAEAGAPTDI 118

Query:   123 SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP-EKAR 181
             SK+   TYE+  EC+KTNYYG K+ CEA+IPLL+ SDSPR+V+++S +  L+++  E A+
Sbjct:   119 SKIMSDTYEIVEECVKTNYYGVKRMCEAMIPLLQSSDSPRIVSIASTMGKLENVSNEWAK 178

Query:   182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 241
              VL D ENLTEE+I+ V+ +Y KDY+EG +  +GW    S Y +SKA + A TR+LAKR+
Sbjct:   179 GVLSDAENLTEEKIDEVINEYLKDYKEGALQVKGWPTVMSGYILSKAAVIALTRVLAKRH 238

Query:   242 PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF 298
               F +N VCPGFV T+INF+ GILSVEEGA SPVKLAL+P+G P+G FF R   + F
Sbjct:   239 KSFIINSVCPGFVNTEINFNTGILSVEEGAASPVKLALVPNGDPSGLFFDRANVSNF 295

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

UNIPROTKB|Q6WAU1 Q6WAU1 "(-)-isopiperitenone reductase" [Mentha x piperita (taxid:34256)]

 Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
 Identities = 165/308 (53%), Positives = 217/308 (70%)

Query:     1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPEL 59
             MAE  ++YA+VTG+NKGIGFE  RQLA KGI V+LT+R+EKRGLEA +KL K   V    
Sbjct:     1 MAEV-QRYALVTGANKGIGFEICRQLAEKGIIVILTSRNEKRGLEARQKLLKELNVSENR 59

Query:    60 LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKF--DMDAF-----AD-SGY 111
             L+FHQLD++DLASV+++A FIK++FGKLDIL NNAG++ V+   D+  F     AD    
Sbjct:    60 LVFHQLDVTDLASVAAVAVFIKSKFGKLDILVNNAGVSGVEMVGDVSVFNEYIEADFKAL 119

Query:   112 QITKGDAEVD---WSKV---CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN 165
             Q  +  A+ +     K      + +E A +C+ TNYYG K+  +ALIPLL+LS SPR+VN
Sbjct:   120 QALEAGAKEEPPFKPKANGEMIEKFEGAKDCVVTNYYGPKRLTQALIPLLQLSPSPRIVN 179

Query:   166 LSSYVSALKDL-PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYK 224
             +SS   +L  L  E A+ VLGD + LTEER++ VV+ + KD +EG++    W PH +A +
Sbjct:   180 VSSSFGSLLLLWNEWAKGVLGDEDRLTEERVDEVVEVFLKDIKEGKLEESQWPPHFAAER 239

Query:   225 VSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGG 284
             VSKA +NAYT+I AK+YP F +N +CPG+ KTDI FHAG LSV E A+ PVKLALLPDGG
Sbjct:   240 VSKAALNAYTKIAAKKYPSFRINAICPGYAKTDITFHAGPLSVAEAAQVPVKLALLPDGG 299

Query:   285 PTGRFFLR 292
             P+G FF R
Sbjct:   300 PSGCFFPR 307

GO:0031525 "menthol biosynthetic process" evidence=IDA

GO:0042214 "terpene metabolic process" evidence=IDA

GO:0052581 "(-)-isopiperitenone reductase activity" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

TAIR|locus:2157408 AT5G51030 [Arabidopsis thaliana (taxid:3702)]

 Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
 Identities = 127/303 (41%), Positives = 178/303 (58%)

Query:     9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
             AVVTG+N+GIGFE VRQLA  G+TV+LT+RDE  G+EA + L+  G + +   FH+LDI 
Sbjct:    40 AVVTGANRGIGFEMVRQLAGHGLTVILTSRDENVGVEAAKILQEGGFNVD---FHRLDIL 96

Query:    69 DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQ 128
             D +S+    ++IK ++G +D+L NNAG+              Y +   D  V++S +   
Sbjct:    97 DSSSIQEFCEWIKEKYGFIDVLINNAGV-------------NYNVGS-DNSVEFSHMV-- 140

Query:   129 TYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVNLSSYVSALKDLPEK-----ARA 182
                     + TNYYGTK    A+IPL+  +    R+VN++S +  LK    K      RA
Sbjct:   141 --------ISTNYYGTKNIINAMIPLMRHACQGARIVNVTSRLGRLKGRHSKLENEDVRA 192

Query:   183 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHS-SAYKVSKAVINAYTRILAKRY 241
              L DV++LTEE ++  V ++ K  EEG   + GW PHS + Y VSK  +NAYTR+LAK  
Sbjct:   193 KLMDVDSLTEEIVDKTVSEFLKQVEEGTWESGGW-PHSFTDYSVSKMAVNAYTRVLAKEL 251

Query:   242 ---P---KFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEE 295
                P   K   NC CPG+VKT +  +AG +S E+GA++ V LALLPD   TG+FF  + E
Sbjct:   252 SERPEGEKIYANCFCPGWVKTAMTGYAGNVSAEDGADTGVWLALLPDQAITGKFFAERRE 311

Query:   296 APF 298
               F
Sbjct:   312 ISF 314

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

UNIPROTKB|J9P7P2 CBR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 238 (88.8 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
 Identities = 65/169 (38%), Positives = 95/169 (56%)

Query:   137 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS--ALKDL-PEKARAVLGDVENLTEE 193
             +KTN++GT+  C  L+PL++     R+VN+SS VS  ALK   PE  +      E +TEE
Sbjct:   111 MKTNFFGTRDVCTELLPLMK--PQGRVVNVSSVVSVRALKSCSPELQQKFRS--EAITEE 166

Query:   194 RIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK------RYPKFCVN 247
              +  ++  + +D ++G   N GW P  +AY V+K  +   +RI A+      R  K  +N
Sbjct:   167 ELVGLMNKFVEDTKKGVHRNEGW-P-DNAYGVTKIGVTVLSRIHARKLSEQRRDDKILLN 224

Query:   248 CVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRKE 294
               CPG+V+TD+       S EEGAE+PV LALLP    GP G F + K+
Sbjct:   225 ACCPGWVRTDMAGPRAPKSPEEGAETPVYLALLPSDAEGPHGEFLMEKK 273

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q3T0T9 MGC127133 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 236 (88.1 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
 Identities = 52/99 (52%), Positives = 71/99 (71%)

Query:     1 MAEATKKYAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPE 58
             M+ +T+  A+VTG+NKG+GF  VR L  +  G  VVLTARDE RG  AV++L+A G+ P 
Sbjct:     1 MSSSTR-VALVTGANKGLGFAIVRDLCRRFPG-DVVLTARDEARGRAAVQQLQAEGLSPR 58

Query:    59 LLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIA 97
                FHQLDI+DL S+ +L DF++ ++G LD+L NNA IA
Sbjct:    59 ---FHQLDITDLQSIHALRDFLRKEYGGLDVLVNNAAIA 94

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E2RIN9 LOC480785 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 233 (87.1 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
 Identities = 64/171 (37%), Positives = 92/171 (53%)

Query:   137 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS--ALKDL-PEKARAVLGDVENLTEE 193
             LKTN++GT+  C  L+PL++     R+VN+SS +    LK   PE  +      E +TEE
Sbjct:    81 LKTNFFGTRDICTELLPLVK--PQGRVVNVSSVMGFVTLKQCSPELQQKFTS--EAITEE 136

Query:   194 RIEMVVKDYFKDYEEGEIANRGWCPHSS--AYKVSKAVINAYTRILAK------RYPKFC 245
              + M++  + +D + G     GW P      Y +SK  I   +RI A+      R  K  
Sbjct:   137 ELGMLMNKFVEDVKNGVHKKEGW-PDMKLVTYGISKMGITILSRIHARKLSEQRRGDKIF 195

Query:   246 VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRKE 294
             +N  CPG+++TD+    GI S EEGAE+PV LALLP    GP G F + K+
Sbjct:   196 LNACCPGWLRTDMGGPKGIKSPEEGAETPVYLALLPSDAEGPHGEFVMEKK 246

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

TAIR|locus:2097508 AT3G59710 [Arabidopsis thaliana (taxid:3702)]

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 90/297 (30%), Positives = 145/297 (48%)

Query:     1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
             M   T  Y ++T      G   + +  S+  T V+T  ++  G   V++L   G+   L 
Sbjct:     1 MDVVTLMYGLITYIIYAYGI--IHEWWSEETTAVVTGANKGIGFAVVKRLLELGLTVVLT 58

Query:    61 LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGY-QITKGDAE 119
               +  + S  A       F    F  LDI ++ + IA+  F      + G   I   +A 
Sbjct:    59 ARNAENGSQAAESLRRIGFGNVHFCCLDI-SDPSSIAA--FASWFGRNLGILDILVNNAA 115

Query:   120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS-PRLVNLSSYVSALKDLPE 178
             V ++ V     +     +KTN+YG K   EAL+PL   S S  R++N+SS +  L  L  
Sbjct:   116 VSFNAVGENLIKEPETIIKTNFYGAKLLTEALLPLFRRSVSVSRILNMSSRLGTLNKLRS 175

Query:   179 KA-RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
              + R +L + E+LT E+I+  +  + +D + G    +GW  +   Y +SK  +NAY+R+L
Sbjct:   176 PSIRRIL-ESEDLTNEQIDATLTQFLQDVKSGTWEKQGWPENWPDYAISKLALNAYSRVL 234

Query:   238 AKRYP--KFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLP-DGGPTGRFFL 291
             A+RY   K  VNC+CPGF +T +    G  + +E A    KL LLP +   TG+F++
Sbjct:   235 ARRYDGKKLSVNCLCPGFTRTSMTGGQGTHTADEAAAIVAKLVLLPPEKLATGKFYI 291

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

UNIPROTKB|L7N0B8 L7N0B8 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 210 (79.0 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
 Identities = 46/91 (50%), Positives = 61/91 (67%)

Query:     7 KYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
             + AVVTG+NKG+GF  +R L       VVLTARDE RG  AV++L++ G+ P    FH L
Sbjct:     6 RVAVVTGANKGLGFAIMRDLCRNFSGDVVLTARDEARGRAAVQQLQSKGLSPR---FHLL 62

Query:    66 DISDLASVSSLADFIKTQFGKLDILANNAGI 96
             DI DL S+ +L DF+  ++  LD+L NNAGI
Sbjct:    63 DIDDLQSICTLRDFLCKEYRGLDVLVNNAGI 93

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|2286 Cbr1 "carbonyl reductase 1" [Rattus norvegicus (taxid:10116)]

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 78/232 (33%), Positives = 125/232 (53%)

Query:    80 IKTQFGKLDILANNAGIASVK-FDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVEC-L 137
             +  +F +LDI  N   I +++ F +  +   G  +   +A + +  V    + +  E  +
Sbjct:    55 LSPRFHQLDI-DNPQSIRALRDFLLQEYG--GLNVLVNNAGIAFKVVDPTPFHIQAEVTM 111

Query:   138 KTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS--ALKDL-PEKARAVLGDVENLTEER 194
             KTN++GT+  C+ L+P+++     R+VN+SS VS  ALK   PE  +      E +TEE 
Sbjct:   112 KTNFFGTQDVCKELLPIIK--PQGRVVNVSSSVSLRALKSCSPELQQKFRS--ETITEEE 167

Query:   195 IEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK------RYPKFCVNC 248
             +  ++  + +D ++G  A  GW P+S AY V+K  +   +RI A+      R  K  +N 
Sbjct:   168 LVGLMNKFIEDAKKGVHAKEGW-PNS-AYGVTKIGVTVLSRIYARKLNEERREDKILLNA 225

Query:   249 VCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRKEEAPF 298
              CPG+V+TD+       S EEGAE+PV LALLP G  GP G+F   K+  P+
Sbjct:   226 CCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPGAEGPHGQFVQDKKVEPW 277

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001542 "ovulation from ovarian follicle" evidence=IEP

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISO;ISS;IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005902 "microvillus" evidence=IDA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=ISO

GO:0017144 "drug metabolic process" evidence=ISO;ISS

GO:0018205 "peptidyl-lysine modification" evidence=NAS

GO:0032496 "response to lipopolysaccharide" evidence=IEP

GO:0033574 "response to testosterone stimulus" evidence=IEP

GO:0034698 "response to gonadotropin stimulus" evidence=IEP

GO:0042373 "vitamin K metabolic process" evidence=ISO;ISS

GO:0042376 "phylloquinone catabolic process" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

GO:0047021 "15-hydroxyprostaglandin dehydrogenase (NADP+) activity" evidence=IEA

GO:0050221 "prostaglandin-E2 9-reductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=ISO

MGI|MGI:88284 Cbr1 "carbonyl reductase 1" [Mus musculus (taxid:10090)]

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 84/238 (35%), Positives = 131/238 (55%)

Query:    77 ADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQT-YELAVE 135
             A+ +  +F +LDI  N   I +++ D       G  +   +A + + KV   T + +  E
Sbjct:    52 AEGLSPRFHQLDI-DNPQSIRALR-DFLLKEYGGLDVLVNNAGIAF-KVNDDTPFHIQAE 108

Query:   136 C-LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS--ALK----DLPEKARAVLGDVE 188
               +KTN++GT+  C+ L+PL++     R+VN+SS VS  ALK    +L +K R+     E
Sbjct:   109 VTMKTNFFGTRDVCKELLPLIK--PQGRVVNVSSMVSLRALKNCRLELQQKFRS-----E 161

Query:   189 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK------RYP 242
              +TEE +  ++  + +D ++G  A  GW P+S AY V+K  +   +RILA+      R  
Sbjct:   162 TITEEELVGLMNKFVEDTKKGVHAEEGW-PNS-AYGVTKIGVTVLSRILARKLNEQRRGD 219

Query:   243 KFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLP-DG-GPTGRFFLRKEEAPF 298
             K  +N  CPG+V+TD+       S EEGAE+PV LALLP D  GP G+F   K+  P+
Sbjct:   220 KILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVQDKKVEPW 277

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISO;TAS

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0005902 "microvillus" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=ISO

GO:0017144 "drug metabolic process" evidence=ISO

GO:0042373 "vitamin K metabolic process" evidence=ISO

GO:0042376 "phylloquinone catabolic process" evidence=ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0047021 "15-hydroxyprostaglandin dehydrogenase (NADP+) activity" evidence=IEA

GO:0050221 "prostaglandin-E2 9-reductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=ISO;TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P16152	CBR1_HUMAN	1, ., 1, ., 1, ., 1, 8, 9	0.3933	0.8389	0.9025	yes	no
Q6WAU1	IPIPR_MENPI	1, ., 3, ., 1, ., 8, 2	0.5227	0.9765	0.9267	N/A	no
A4UHT7	SALR_PAPBR	1, ., 1, ., 1, ., 2, 4, 8	0.5315	0.9731	0.9324	N/A	no
Q9M2E2	SDR1_ARATH	1, ., 1, ., 1, ., 2, 0, 8	0.5747	0.9832	0.9898	yes	no
Q5RCU5	CBR1_PONAB	1, ., 1, ., 1, ., 1, 8, 9	0.39	0.8389	0.9025	yes	no
B2X050	MNR1_CAPAN	1, ., 1, ., 1, ., 2, 0, 8	0.5191	1.0	0.9490	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.963
4th Layer	1.1.1.189	LOW CONFIDENCE prediction!
4th Layer	1.1.1.197	LOW CONFIDENCE prediction!
3rd Layer	1.3.1.58	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0039002901 hypothetical protein (297 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	298
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	1e-89
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	7e-39
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-35
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-30
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	7e-29
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	6e-27
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-25
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	6e-25
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-23
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	4e-22
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	7e-22
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-21
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	2e-21
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	8e-21
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-20
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	8e-20
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-20
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-18
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	2e-18
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-18
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	1e-17
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	8e-17
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	9e-17
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	1e-16
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	2e-16
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-16
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	2e-16
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	7e-16
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	8e-16
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-16
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	1e-15
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	2e-15
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	2e-15
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-15
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	4e-15
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	5e-15
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	6e-15
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	6e-15
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	7e-15
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	8e-15
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	2e-14
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	2e-14
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	2e-14
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-14
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	2e-14
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	2e-14
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	3e-14
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	3e-14
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-14
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	4e-14
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	6e-14
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	6e-14
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	6e-14
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	6e-14
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	7e-14
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	8e-14
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	9e-14
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	9e-14
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-13
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	1e-13
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	2e-13
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-13
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-13
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	3e-13
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	3e-13
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	3e-13
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	4e-13
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	4e-13
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	4e-13
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	4e-13
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	5e-13
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	5e-13
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	9e-13
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	9e-13
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	9e-13
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	1e-12
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	2e-12
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	2e-12
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	2e-12
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	2e-12
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	2e-12
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	2e-12
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	3e-12
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	3e-12
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	4e-12
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	4e-12
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	5e-12
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	5e-12
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	5e-12
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	6e-12
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	6e-12
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	7e-12
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	7e-12
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	8e-12
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	8e-12
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	9e-12
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-11
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-11
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-11
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-11
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	2e-11
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	3e-11
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	4e-11
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-11
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	4e-11
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	5e-11
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	6e-11
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	6e-11
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	7e-11
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	7e-11
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	8e-11
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	8e-11
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-10
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	1e-10
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	2e-10
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	2e-10
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-10
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	2e-10
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-10
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	3e-10
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	3e-10
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	4e-10
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	5e-10
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	5e-10
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-10
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	8e-10
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	8e-10
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	8e-10
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	8e-10
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	9e-10
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	1e-09
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-09
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	2e-09
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	2e-09
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-09
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-09
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-09
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-09
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-09
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	3e-09
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	3e-09
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	3e-09
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	3e-09
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	4e-09
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	5e-09
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	7e-09
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	8e-09
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	8e-09
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	8e-09
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-08
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	1e-08
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	2e-08
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	2e-08
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	2e-08
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	3e-08
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	4e-08
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	4e-08
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	5e-08
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	5e-08
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	5e-08
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	5e-08
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	6e-08
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	6e-08
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	6e-08
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	6e-08
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	6e-08
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-08
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	1e-07
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-07
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	1e-07
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-07
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-07
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-07
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	1e-07
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-07
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	2e-07
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-07
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	2e-07
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	2e-07
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-07
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	3e-07
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	3e-07
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	3e-07
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	3e-07
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	4e-07
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	4e-07
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	8e-07
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	9e-07
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	9e-07
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-06
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	1e-06
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	2e-06
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	2e-06
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	2e-06
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	2e-06
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	2e-06
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	2e-06
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	3e-06
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	4e-06
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	4e-06
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	5e-06
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-06
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	9e-06
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	9e-06
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	1e-05
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	1e-05
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	1e-05
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	1e-05
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	1e-05
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	1e-05
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	1e-05
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-05
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	1e-05
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-05
pfam08659	181	pfam08659, KR, KR domain	2e-05
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	2e-05
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	2e-05
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-05
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	2e-05
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	2e-05
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	3e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	3e-05
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	4e-05
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	4e-05
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	5e-05
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	5e-05
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	5e-05
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	6e-05
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	7e-05
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	7e-05
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	1e-04
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	1e-04
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	1e-04
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	1e-04
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	1e-04
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	2e-04
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	2e-04
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	2e-04
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	2e-04
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	5e-04
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	5e-04
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	6e-04
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	8e-04
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.001
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	0.001
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	0.001
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	0.001
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	0.001
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	0.001
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	0.002
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	0.002
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	0.004
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	0.004

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  266 bits (681), Expect = 1e-89
 Identities = 122/296 (41%), Positives = 158/296 (53%), Gaps = 75/296 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A+VTG+N+GIGFE VRQLA  G  TV+LTARD +RG  AVEKL+A G+      FHQL
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVR---FHQL 57

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D++D AS+ + ADF++ ++G LDIL NNAGIA   F     +                  
Sbjct: 58  DVTDDASIEAAADFVEEKYGGLDILVNNAGIA---FKGFDDST----------------- 97

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
              T E A E +KTN++GT    +AL+PLL+ S + R+VN+SS + +L            
Sbjct: 98  --PTREQARETMKTNFFGTVDVTQALLPLLKKSPAGRIVNVSSGLGSL------------ 143

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK 243
                                             +SAY VSKA +NA TRILAK      
Sbjct: 144 ----------------------------------TSAYGVSKAALNALTRILAKELKETG 169

Query: 244 FCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLP-DGGPTGRFFLRKEEAPF 298
             VN  CPG+VKTD+       + EEGAE+PV LALLP DG PTG+FF  K+  P+
Sbjct: 170 IKVNACCPGWVKTDMGGGKAPKTPEEGAETPVYLALLPPDGEPTGKFFSDKKVVPW 225

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  137 bits (347), Expect = 7e-39
 Identities = 83/301 (27%), Positives = 127/301 (42%), Gaps = 70/301 (23%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
            K  V+TG+N GIG ET R+LA +G  V++  R+E++G EA  ++K        +   QL
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKET-GNAKVEVIQL 59

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D+S LASV   A+    +F +LDIL NNAGI +             ++TK          
Sbjct: 60  DLSSLASVRQFAEEFLARFPRLDILINNAGIMAPPR----------RLTK---------- 99

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
               +EL       NY G       L+P+L+ S   R+VN+SS       +         
Sbjct: 100 --DGFELQFA---VNYLGHFLLTNLLLPVLKASAPSRIVNVSSIAHRAGPID-------- 146

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK 243
                       +  +  K+Y   +           AY  SK     +TR LA+R     
Sbjct: 147 ---------FNDLDLENNKEYSPYK-----------AYGQSKLANILFTRELARRLEGTG 186

Query: 244 FCVNCVCPGFVKTDINFHAGIL-------------SVEEGAESPVKLALLPD-GGPTGRF 289
             VN + PG V+T++    G               S E+GA++ +  A  P+  G +G++
Sbjct: 187 VTVNALHPGVVRTELLRRNGSFFLLYKLLRPFLKKSPEQGAQTALYAATSPELEGVSGKY 246

Query: 290 F 290
           F
Sbjct: 247 F 247

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  127 bits (320), Expect = 2e-35
 Identities = 80/300 (26%), Positives = 115/300 (38%), Gaps = 87/300 (29%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           A+VTG++ GIG    R+LA +G  VVL  R+E+  L  +  ++A G +    +  Q D+S
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEA-LAELAAIEALGGN---AVAVQADVS 56

Query: 69  DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQ 128
           D   V +L +    +FG+LDIL NNAGIA      +   +            DW +V   
Sbjct: 57  DEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDE------------DWDRV--- 101

Query: 129 TYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE 188
                   L  N  G      A +P ++     R+VN+SS V+ L+ L            
Sbjct: 102 --------LDVNLTGVFLLTRAALPHMKKQGGGRIVNISS-VAGLRPL------------ 140

Query: 189 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CV 246
                                        P  +AY  SKA +   TR LA     +   V
Sbjct: 141 -----------------------------PGQAAYAASKAALEGLTRSLALELAPYGIRV 171

Query: 247 NCVCPGFVKTDINFHAG----------------ILSVEEGAESPVKLALLPDGGPTGRFF 290
           N V PG V T +    G                + + EE AE+ V LA       TG+  
Sbjct: 172 NAVAPGLVDTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLASDEASYITGQVI 231

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  112 bits (284), Expect = 6e-30
 Identities = 65/257 (25%), Positives = 99/257 (38%), Gaps = 70/257 (27%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             K A+VTG+++GIG     +LA+ G  VV+   +E+       +L+A+G +  +L    
Sbjct: 4   QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVL---V 60

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            D+SD A+V +L +     FG LDIL NNAGI                      E DW +
Sbjct: 61  FDVSDEAAVRALIEAAVEAFGALDILVNNAGI----TRDALLPR-------MSEE-DWDR 108

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           V      + V  L   +   +    A +P +  +   R+VN+SS                
Sbjct: 109 V------IDV-NLTGTFNVVR----AALPPMIKARYGRIVNISSVS-------------- 143

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                   G   N G     + Y  +KA +  +T+ LA      
Sbjct: 144 ------------------------GVTGNPGQ----TNYSAAKAGVIGFTKALALELASR 175

Query: 245 --CVNCVCPGFVKTDIN 259
              VN V PGF+ TD+ 
Sbjct: 176 GITVNAVAPGFIDTDMT 192

Length = 246

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  110 bits (277), Expect = 7e-29
 Identities = 71/290 (24%), Positives = 103/290 (35%), Gaps = 81/290 (27%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR--DEKRGLEAVEKLKASGVDPELLLF 62
           + K A+VTG++ GIG    R LA +G  VV+ AR  +E+        +K +G        
Sbjct: 4   SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGR--AAA 61

Query: 63  HQLDISD-LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVD 121
              D+SD   SV +L    + +FG++DIL NNAGIA     ++   +            D
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEE-----------D 110

Query: 122 WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR 181
           W +V           +  N  G      A +P   L    R+VN+SS             
Sbjct: 111 WDRV-----------IDVNLLGAFLLTRAALP---LMKKQRIVNISS------------- 143

Query: 182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 241
                                        +A  G  P  +AY  SKA +   T+ LA   
Sbjct: 144 -----------------------------VAGLGGPPGQAAYAASKAALIGLTKALALEL 174

Query: 242 PKFC--VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
                 VN V PG++ T +            +     L  L    P GR 
Sbjct: 175 APRGIRVNAVAPGYIDTPMTAAL-------ESAELEALKRLAARIPLGRL 217

Length = 251

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  104 bits (263), Expect = 6e-27
 Identities = 71/254 (27%), Positives = 107/254 (42%), Gaps = 70/254 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG     +LA++G  V +T R E+   E VE++KA G +       + D
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGN---AAALEAD 57

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +SD  +V +L + ++ +FG +DIL NNAGI       D        + +   E DW  V 
Sbjct: 58  VSDREAVEALVEKVEAEFGPVDILVNNAGITR-----DNL------LMRMSEE-DWDAV- 104

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     +  N  G     +A+I  +    S R++N+SS V                
Sbjct: 105 ----------INVNLTGVFNVTQAVIRAMIKRRSGRIINISSVV---------------- 138

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                 G I N G     + Y  SKA +  +T+ LAK       
Sbjct: 139 ----------------------GLIGNPG----QANYAASKAGVIGFTKSLAKELASRGI 172

Query: 245 CVNCVCPGFVKTDI 258
            VN V PGF+ TD+
Sbjct: 173 TVNAVAPGFIDTDM 186

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  101 bits (255), Expect = 1e-25
 Identities = 69/260 (26%), Positives = 101/260 (38%), Gaps = 79/260 (30%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFH 63
             K A+VTG+++GIG     +LA++G  VV+     + G EA V ++ A G      L  
Sbjct: 4   EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGK---ALAV 60

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIA----SVKFDMDAFADSGYQITKGDAE 119
           Q D+SD  SV    D  K +FG +DIL NNAGI      ++   +               
Sbjct: 61  QGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEE--------------- 105

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK 179
            DW +V           + TN  G     +A+   +    S R++N+SS V         
Sbjct: 106 -DWDRV-----------IDTNLTGVFNLTKAVARPMMKQRSGRIINISSVV--------- 144

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
                                        G + N G       Y  SKA +  +T+ LA+
Sbjct: 145 -----------------------------GLMGNPGQA----NYAASKAGVIGFTKSLAR 171

Query: 240 RYPKF--CVNCVCPGFVKTD 257
                   VN V PGF++TD
Sbjct: 172 ELASRGITVNAVAPGFIETD 191

Length = 248

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 6e-25
 Identities = 60/259 (23%), Positives = 79/259 (30%), Gaps = 70/259 (27%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
            +    K A+VTG+ +G+G      LA  G TV           E    L+A+G      
Sbjct: 2   ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGR---A 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D++D ASV    D      G LD L NNAGI + K                    
Sbjct: 59  HAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSK-SATELDID----------- 106

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
            W  V           +  N  GT     A +P L  S   R+VNL+S  +         
Sbjct: 107 TWDAV-----------MNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWG------ 149

Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK- 239
                                                P   AY  SK  +   TR LA+ 
Sbjct: 150 ------------------------------------APKLGAYVASKGAVIGMTRSLARE 173

Query: 240 -RYPKFCVNCVCPGFVKTD 257
                  VN + PG   T+
Sbjct: 174 LGGRGITVNAIAPGLTATE 192

Length = 250

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 96.1 bits (240), Expect = 1e-23
 Identities = 59/270 (21%), Positives = 99/270 (36%), Gaps = 73/270 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG + GIG      LA++G  V+ TAR+    LE++ +L    ++       +LD
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARN-PDKLESLGELLNDNLEVL-----ELD 54

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++D  S+ +    +  +FG++D+L NNAG            +                  
Sbjct: 55  VTDEESIKAAVKEVIERFGRIDVLVNNAGYGLFG----PLEE------------------ 92

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
             + E   E  + N +G  +   A +PL+    S R+VN+SS V+ L   P         
Sbjct: 93  -TSIEEVRELFEVNVFGPLRVTRAFLPLMRKQGSGRIVNVSS-VAGLVPTPFL------- 143

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV 246
                                               Y  SKA + A +  L      F +
Sbjct: 144 ----------------------------------GPYCASKAALEALSESLRLELAPFGI 169

Query: 247 NCVC--PGFVKTDINFHAGILSVEEGAESP 274
                 PG V+T    +A   ++E+   SP
Sbjct: 170 KVTIIEPGPVRTGFADNAAGSALEDPEISP 199

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 92.0 bits (229), Expect = 4e-22
 Identities = 74/292 (25%), Positives = 117/292 (40%), Gaps = 78/292 (26%)

Query: 9   AVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
            ++TG+++GIG E VRQL ++G  TV+ T RD      A  +L A G     L   +LD+
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDP----SAATELAALGASHSRLHILELDV 56

Query: 68  SDL--ASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           +D    S  ++A   +     LD+L NNAGI                     +EVD    
Sbjct: 57  TDEIAESAEAVA--ERLGDAGLDVLINNAGILH--------------SYGPASEVD---- 96

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                E  +E  + N  G     +A +PLL      +++N+SS V ++ D          
Sbjct: 97  ----SEDLLEVFQVNVLGPLLLTQAFLPLLLKGARAKIINISSRVGSIGDNTSG------ 146

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA---KRYP 242
                                        GW     +Y+ SKA +N  T+ LA   KR  
Sbjct: 147 -----------------------------GW----YSYRASKAALNMLTKSLAVELKRDG 173

Query: 243 KFCVNCVCPGFVKTD----INFHAGILSVEEGAESPVKLALLPDGGPTGRFF 290
              V+ + PG+V+TD       + G ++ EE     +K+    +   +G+F 
Sbjct: 174 ITVVS-LHPGWVRTDMGGPFAKNKGPITPEESVAGLLKVIDNLNEEDSGKFL 224

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 92.8 bits (231), Expect = 7e-22
 Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 1/88 (1%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           AVVTG+N G+G+ET   LA+KG  VVL  R+  +G  A  ++ A+    ++ L  +LD++
Sbjct: 19  AVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTL-QELDLT 77

Query: 69  DLASVSSLADFIKTQFGKLDILANNAGI 96
            LASV + AD ++  + ++D+L NNAG+
Sbjct: 78  SLASVRAAADALRAAYPRIDLLINNAGV 105

Length = 306

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 90.7 bits (226), Expect = 1e-21
 Identities = 70/252 (27%), Positives = 102/252 (40%), Gaps = 71/252 (28%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
           A+VTG+++GIG     +LA +G  V++T    E+   E VE+LKA GV     L    D+
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVK---ALGVVCDV 57

Query: 68  SDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCY 127
           SD   V ++ + I+ + G +DIL NNAGI      M               E DW  V  
Sbjct: 58  SDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRM------------KEEDWDAV-- 103

Query: 128 QTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV 187
                    + TN  G     +A++ ++    S R++N+SS V                 
Sbjct: 104 ---------IDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVV----------------- 137

Query: 188 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FC 245
                                G + N G     + Y  SKA +  +T+ LAK        
Sbjct: 138 ---------------------GLMGNAG----QANYAASKAGVIGFTKSLAKELASRNIT 172

Query: 246 VNCVCPGFVKTD 257
           VN V PGF+ TD
Sbjct: 173 VNAVAPGFIDTD 184

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 90.4 bits (225), Expect = 2e-21
 Identities = 61/259 (23%), Positives = 92/259 (35%), Gaps = 69/259 (26%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
             +   + A+VTG+ +GIG     +LA+ G  V++            E ++A+G      
Sbjct: 1   TRDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARAR 60

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
              Q+D+ D A++ +        FG+LDIL  NAGI    F +  FA+          + 
Sbjct: 61  ---QVDVRDRAALKAAVAAGVEDFGRLDILVANAGI----FPLTPFAEMD--------DE 105

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
            W +V           +  N  GT    +A +P L  +   R+V  SS            
Sbjct: 106 QWERV-----------IDVNLTGTFLLTQAALPALIRAGGGRIVLTSS------------ 142

Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
             V G                         +   G     + Y  SKA +  +TR LA  
Sbjct: 143 --VAGPR-----------------------VGYPGL----AHYAASKAGLVGFTRALALE 173

Query: 241 YPKF--CVNCVCPGFVKTD 257
                  VN V PG V T 
Sbjct: 174 LAARNITVNSVHPGGVDTP 192

Length = 251

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 88.8 bits (221), Expect = 8e-21
 Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 30/169 (17%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPEL 59
           M     K A++TG++ GIG  T R LA  G  VVL AR E+R LEA+ +++ A       
Sbjct: 1   MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREER-LEALADEIGAGAALA-- 57

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAE 119
                LD++D A+V +  + +  +FG++DIL NNAG+A            G  + + D +
Sbjct: 58  ---LALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLA-----------LGDPLDEADLD 103

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
            DW ++           + TN  G      A++P +    S  ++NL S
Sbjct: 104 -DWDRM-----------IDTNVKGLLNGTRAVLPGMVERKSGHIINLGS 140

Length = 246

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 88.0 bits (219), Expect = 2e-20
 Identities = 66/254 (25%), Positives = 101/254 (39%), Gaps = 71/254 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQL 65
           + A+VTG+ +G+G     +LA  G  VV+  R DE+   E VE ++A G         Q 
Sbjct: 7   RVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRR---AQAVQA 63

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D++D A++ +       +FG++DIL NNAGI    F+    AD          + +W   
Sbjct: 64  DVTDKAALEAAVAAAVERFGRIDILVNNAGI----FEDKPLADMS--------DDEW--- 108

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                    E +  N  G      A++P +      R+VN+SS V+ L            
Sbjct: 109 --------DEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISS-VAGLP----------- 148

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                        GW P  S Y  +KA +   T+ LA+   ++ 
Sbjct: 149 -----------------------------GW-PGRSNYAAAKAGLVGLTKALARELAEYG 178

Query: 245 -CVNCVCPGFVKTD 257
             VN V PG + TD
Sbjct: 179 ITVNMVAPGDIDTD 192

Length = 249

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 85.8 bits (213), Expect = 8e-20
 Identities = 58/258 (22%), Positives = 85/258 (32%), Gaps = 72/258 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG   GIG  T + L  KG  V +  R+E  G  A  +     V      F Q D
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVK---ATFVQCD 57

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++    +++       +FG++DIL NNAGI           +  Y    G     W K  
Sbjct: 58  VTSWEQLAAAFKKAIEKFGRVDILINNAGI---------LDEKSYLFA-GKLPPPWEKT- 106

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP---RLVNLSSYVSALKDLPEKARAV 183
                     +  N  G   T    +  ++ +       +VN+ S V+ L   P      
Sbjct: 107 ----------IDVNLTGVINTTYLALHYMDKNKGGKGGVIVNIGS-VAGLY--P------ 147

Query: 184 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK 243
                                             P    Y  SK  +  +TR LA     
Sbjct: 148 ---------------------------------APQFPVYSASKHGVVGFTRSLADLLEY 174

Query: 244 F---CVNCVCPGFVKTDI 258
                VN +CPGF  T +
Sbjct: 175 KTGVRVNAICPGFTNTPL 192

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 85.7 bits (213), Expect = 9e-20
 Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 6/102 (5%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            K A+VTG++ GIG      LA +G  VV+    +E+   E +E++K  G D    +  +
Sbjct: 5   GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGD---AIAVK 61

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMD 104
            D+S    V +L + I  +FGK+DIL NNAGI++     DM 
Sbjct: 62  ADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMT 103

Length = 247

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 82.7 bits (205), Expect = 2e-18
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 6/99 (6%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK--LKASGVDPE 58
                K A++TG++ GIG E  +QLA +G  ++L AR E + LEA+ K     +GV+ E
Sbjct: 1  PGPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDK-LEALAKELEDKTGVEVE 59

Query: 59 LLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIA 97
                 D+SD  ++  L D +K + G +D+L NNAG  
Sbjct: 60 ---VIPADLSDPEALERLEDELKERGGPIDVLVNNAGFG 95

Length = 265

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 82.9 bits (205), Expect = 2e-18
 Identities = 83/314 (26%), Positives = 133/314 (42%), Gaps = 79/314 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG+N GIG ET R+LA +G  V++  RD  +  EA  +++   ++ E+++ H LD
Sbjct: 2   KTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRH-LD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++ L S+ + A     +  +LD+L NNAG+              Y  T+   E+      
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCP----------YSKTEDGFEM------ 104

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
               +  V     N+ G       L+ LL+ S   R+VN+SS       +         +
Sbjct: 105 ----QFGV-----NHLGHFLLTNLLLDLLKKSAPSRIVNVSSLAHKAGKI---------N 146

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV 246
            ++L  E          K Y  G            AY  SK     +TR LA+R     V
Sbjct: 147 FDDLNSE----------KSYNTG-----------FAYCQSKLANVLFTRELARRLQGTGV 185

Query: 247 --NCVCPGFVKTDINFHAGIL-----------------SVEEGAESPVKLALLPD-GGPT 286
             N + PG V+T++  H GI                  +  EGA++ + LAL  +  G +
Sbjct: 186 TVNALHPGVVRTELGRHTGIHHLFLSTLLNPLFWPFVKTPREGAQTSIYLALAEELEGVS 245

Query: 287 GRFF---LRKEEAP 297
           G++F     KE AP
Sbjct: 246 GKYFSDCKLKEPAP 259

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 82.0 bits (203), Expect = 2e-18
 Identities = 58/254 (22%), Positives = 98/254 (38%), Gaps = 70/254 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIGF     LA  G  +V+ +R+E++  EA + ++  GV+         D
Sbjct: 6   KVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVE---ATAFTCD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +SD  ++ +  + I+  FGK+DIL NNAGI           +          E +W  V 
Sbjct: 63  VSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRR----HPAEEFP--------EAEWRDV- 109

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     +  N  G     +A+   +      +++N+ S +S               
Sbjct: 110 ----------IDVNLNGVFFVSQAVARHMIKQGHGKIINICSLLS--------------- 144

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC- 245
                               E G        P   AY  SK  +   T+ LA  + +   
Sbjct: 145 --------------------ELGG-------PPVPAYAASKGGVAGLTKALATEWARHGI 177

Query: 246 -VNCVCPGFVKTDI 258
            VN + PG+  T++
Sbjct: 178 QVNAIAPGYFATEM 191

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 79.7 bits (197), Expect = 1e-17
 Identities = 59/276 (21%), Positives = 99/276 (35%), Gaps = 75/276 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG  +G+G    R L ++G  VVL+   ++ G  A  +L       +   F  LD
Sbjct: 6   KVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELG------DAARFFHLD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++D    +++ D  +  FG+LD+L NNAGI +         +            +W ++ 
Sbjct: 60  VTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLE------------EWRRL- 106

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     L  N  G      A+IP ++ +    ++N+SS              ++GD
Sbjct: 107 ----------LDINLTGVFLGTRAVIPPMKEAGGGSIINMSS-----------IEGLVGD 145

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI----LAKRYP 242
                                          P  +AY  SK  +   T+      A +  
Sbjct: 146 -------------------------------PALAAYNASKGAVRGLTKSAALECATQGY 174

Query: 243 KFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLA 278
              VN V PG++ T +     I   E G      + 
Sbjct: 175 GIRVNSVHPGYIYTPMTDELLIAQGEMGNYPNTPMG 210

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 77.4 bits (191), Expect = 8e-17
 Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 4/97 (4%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          M     K A++TG +KGIGF     L ++G  V +TARD+K   EA  +L   G     +
Sbjct: 1  MMSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGN----V 56

Query: 61 LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIA 97
          L    D+ D A V    D I   FG LD+L  NAG+ 
Sbjct: 57 LGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVG 93

Length = 237

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 77.7 bits (192), Expect = 9e-17
 Identities = 55/253 (21%), Positives = 91/253 (35%), Gaps = 70/253 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VT ++ GIG    R LA +G  V + AR+ +    A  +L+A G     +     D
Sbjct: 2   KVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAV---VAD 58

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++D   +  L +     FG++DIL NNAG          FA+   +        DW    
Sbjct: 59  LTDPEDIDRLVEKAGDAFGRVDILVNNAG--GPP--PGPFAELTDE--------DWL--- 103

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                   E          +   A++P ++     R+VN+SS              V   
Sbjct: 104 --------EAFDLKLLSVIRIVRAVLPGMKERGWGRIVNISSL------------TVKEP 143

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV 246
             NL                    ++N           V++A +    + L++      V
Sbjct: 144 EPNLV-------------------LSN-----------VARAGLIGLVKTLSRELAPDGV 173

Query: 247 --NCVCPGFVKTD 257
             N V PG++ T+
Sbjct: 174 TVNSVLPGYIDTE 186

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 77.6 bits (191), Expect = 1e-16
 Identities = 75/300 (25%), Positives = 119/300 (39%), Gaps = 74/300 (24%)

Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
           ++TG+N GIG      +A +G TV +  R++ R  EA ++++    +  + L H +D+SD
Sbjct: 5   LITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFL-HIVDMSD 63

Query: 70  LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQT 129
              V    +  K +  KL +L NNAG    K ++    + G +                 
Sbjct: 64  PKQVWEFVEEFKEEGKKLHVLINNAGCMVNKRELT---EDGLEKN--------------- 105

Query: 130 YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS---YVSALKDLPEKARAVLGD 186
                    TN  GT      LIP+LE  + PR++ +SS    V  L            +
Sbjct: 106 -------FATNTLGTYILTTHLIPVLEKEEDPRVITVSSGGMLVQKL------------N 146

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV 246
             NL  E                    R     +  Y  +K      T   AK++P+   
Sbjct: 147 TNNLQSE--------------------RTAFDGTMVYAQNKRQQVIMTEQWAKKHPEIHF 186

Query: 247 NCVCPGFVKTDI------NFHAG----ILSVEEGAESPVKLAL--LPDGGPTGRFFL-RK 293
           + + PG+  T        +FHA     + S E+GA++ V LAL       P+GRF+  RK
Sbjct: 187 SVMHPGWADTPAVRNSMPDFHARFKDRLRSEEQGADTVVWLALSSAAAKAPSGRFYQDRK 246

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 77.3 bits (191), Expect = 2e-16
 Identities = 72/289 (24%), Positives = 110/289 (38%), Gaps = 98/289 (33%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG+++GIG     +LA  G  +VL AR+E R     ++L   G +    L    D
Sbjct: 2   KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEA---LVVPTD 58

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +SD  +   L +    +FG +DIL NNAGI                         WS+  
Sbjct: 59  VSDAEACERLIEAAVARFGGIDILVNNAGITM-----------------------WSRFD 95

Query: 127 YQTYELAV--ECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA---- 180
            +  +L+V    ++ NY G      A +P L+ S   ++V +SS ++ L  +P ++    
Sbjct: 96  -ELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRG-QIVVVSS-LAGLTGVPTRSGYAA 152

Query: 181 --RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
              A+ G  ++L   RIE+                       +   V+            
Sbjct: 153 SKHALHGFFDSL---RIEL-----------------------ADDGVA------------ 174

Query: 239 KRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTG 287
                  V  VCPGFV TDI                 K AL  DG P G
Sbjct: 175 -------VTVVCPGFVATDIR----------------KRALDGDGKPLG 200

Length = 263

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.8 bits (190), Expect = 2e-16
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 4/90 (4%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTG++ GIG    R+ A++G  VV+T R+E+       ++ A G      +    D
Sbjct: 6  KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGR----AIAVAAD 61

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGI 96
          +SD A V +       +FG +DIL NNAG 
Sbjct: 62 VSDEADVEAAVAAALERFGSVDILVNNAGT 91

Length = 251

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 76.2 bits (188), Expect = 2e-16
 Identities = 52/254 (20%), Positives = 87/254 (34%), Gaps = 75/254 (29%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
           A+VTG ++GIG     +LA +G  VV+   + +    E   +++  G    ++   + D+
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVV---RADV 57

Query: 68  SDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDAEVDWSKV 125
           S    V  +   +K +FG+LD+L +NA   + +   ++              A  D    
Sbjct: 58  SQPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTP------------AHWDA--- 102

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      + TN        +    L+      R+V +SS  S              
Sbjct: 103 ----------KMNTNLKALVHCAQQAAKLMRERGGGRIVAISSLGS-------------- 138

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PK- 243
                                       R   P+  A   +KA + A  R LA    P+ 
Sbjct: 139 ---------------------------IRAL-PNYLAVGTAKAALEALVRYLAVELGPRG 170

Query: 244 FCVNCVCPGFVKTD 257
             VN V PG + TD
Sbjct: 171 IRVNAVSPGVIDTD 184

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 75.0 bits (185), Expect = 7e-16
 Identities = 58/259 (22%), Positives = 88/259 (33%), Gaps = 81/259 (31%)

Query: 8   YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
             ++TG+++GIG     +L  +G    VVL AR E    E +++LK        +   + 
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSE----EPLQELKEELRPGLRVTTVKA 56

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAG-IASVK----FDMDAFADSGYQITKGDAEV 120
           D+SD A V  L + I+   G+ D+L NNAG +  V      D+D                
Sbjct: 57  DLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDEL-------------- 102

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL-VNLSSYVSALKDLPEK 179
                  Q Y         N          L+   +     +  VN+SS  +A+      
Sbjct: 103 -------QKY------FDLNLTSPVCLTSTLLRAFKKRGLKKTVVNVSSG-AAVN----- 143

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
                                             +GW      Y  SKA  + + R+LA 
Sbjct: 144 --------------------------------PFKGW----GLYCSSKAARDMFFRVLAA 167

Query: 240 RYPKFCVNCVCPGFVKTDI 258
             P   V    PG V TD+
Sbjct: 168 EEPDVRVLSYAPGVVDTDM 186

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 75.3 bits (186), Expect = 8e-16
 Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 25/159 (15%)

Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
           ++TG++ GIG E    LA  G  +VL+AR E+R  E   +    G  P   +   LD+SD
Sbjct: 7   IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELG-APSPHVVP-LDMSD 64

Query: 70  LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQT 129
           L     + +     FG LDIL NNAGI+                        +       
Sbjct: 65  LEDAEQVVEEALKLFGGLDILINNAGISMRSL--------------------FHDTSIDV 104

Query: 130 YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
               +E    NY+G     +A +P L       +V +SS
Sbjct: 105 DRKIME---VNYFGPVALTKAALPHLIERSQGSIVVVSS 140

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 74.7 bits (184), Expect = 8e-16
 Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 33/172 (19%)

Query: 1   MAEATK-KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPE 58
           MA++ + K A++TG+ +GIG      LA +G+ V L AR E+  L+AV E+++A GV   
Sbjct: 1   MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEE-NLKAVAEEVEAYGVK-- 57

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASV-KF-DMDAFADSGYQITKG 116
            ++    D+SD   V++  + +K + G +DIL NNAGI+   KF ++D            
Sbjct: 58  -VVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDP----------- 105

Query: 117 DAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
               +W K+           ++ N  G      A++P +    S  ++N+SS
Sbjct: 106 ---AEWEKI-----------IQVNLMGVYYATRAVLPSMIERQSGDIINISS 143

Length = 239

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 75.1 bits (185), Expect = 1e-15
 Identities = 64/202 (31%), Positives = 93/202 (46%), Gaps = 37/202 (18%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
             +   + AVVTG + GIG  TV  L   G +V +  RDE+R   A  +L+     P   
Sbjct: 3   QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREK--FPGAR 60

Query: 61  LFHQ-LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAE 119
           L     D+ D A V++ A  ++ +FG +D+L NNAG    +  +  FAD     T  DA 
Sbjct: 61  LLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG----QGRVSTFAD-----TTDDA- 110

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE- 178
             W        EL    LK  Y+       A +PLL  S +  +V ++S + AL+  PE 
Sbjct: 111 --WRD------ELE---LK--YFSVINPTRAFLPLLRASAAASIVCVNS-LLALQ--PEP 154

Query: 179 ------KARA-VLGDVENLTEE 193
                  ARA +L  V++L  E
Sbjct: 155 HMVATSAARAGLLNLVKSLATE 176

Length = 265

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 74.0 bits (182), Expect = 2e-15
 Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 7/106 (6%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           T + A+VTGS++GIG+     LA  G  V+L  RD  +   A E LK  G+    L F  
Sbjct: 9   TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAF-- 66

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGI----ASVKFDMDAF 106
            D++D  +V +  D  + + G +DIL NNAG+        F  DAF
Sbjct: 67  -DVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAF 111

Length = 255

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 74.7 bits (184), Expect = 2e-15
 Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 1/92 (1%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           + K AVVTG++ G+G    R+LA+ G  V+L  R+  +G  AV  ++ +  D +L L   
Sbjct: 13  SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSL-RA 71

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGI 96
           LD+S LASV++L + ++ +   + +L NNAG+
Sbjct: 72  LDLSSLASVAALGEQLRAEGRPIHLLINNAGV 103

Length = 313

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 73.2 bits (180), Expect = 3e-15
 Identities = 58/261 (22%), Positives = 90/261 (34%), Gaps = 70/261 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-LKASGVDPELLLFHQL 65
           K A++TGS+ GIG  T    A  G  + LT RD +R LE   +    +GV  + +L    
Sbjct: 4   KVAIITGSSSGIGAGTAILFARLGARLALTGRDAER-LEETRQSCLQAGVSEKKILLVVA 62

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D+++      +      +FG+LDIL NNAGI +         D   +        ++ KV
Sbjct: 63  DLTEEEGQDRIISTTLAKFGRLDILVNNAGILA----KGGGEDQDIE--------EYDKV 110

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      +  N        +  +P L +     +VN+SS                 
Sbjct: 111 -----------MNLNLRAVIYLTKLAVPHL-IKTKGEIVNVSSVAGGRS----------- 147

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC 245
                                           P    Y +SKA ++ +TR  A       
Sbjct: 148 -------------------------------FPGVLYYCISKAALDQFTRCTALELAPKG 176

Query: 246 --VNCVCPGFVKTDINFHAGI 264
             VN V PG + T  +   G+
Sbjct: 177 VRVNSVSPGVIVTGFHRRMGM 197

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 73.0 bits (180), Expect = 4e-15
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            K A+VTG+  GIG E    LA +G  VV+   +++    A E L+ +G      +   
Sbjct: 3  KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGK---AIGVA 59

Query: 65 LDISDLASVSSLADFIKTQFGKLDILANNAGIASV 99
          +D++D  ++++  D+    FG +DIL NNAGI  V
Sbjct: 60 MDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHV 94

Length = 258

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 72.9 bits (179), Expect = 5e-15
 Identities = 64/260 (24%), Positives = 102/260 (39%), Gaps = 74/260 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M + T K A++TG+ +GIG    R  A  G  ++L     +   +  ++L   G     +
Sbjct: 1   MGKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAV 59

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDA 118
                D+ D ASV++     K + G++DIL NNAG+  +    DM             D 
Sbjct: 60  ---VADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMS------------DE 104

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
           + D+              +  N  G     +A++P +      R+V +SS          
Sbjct: 105 DRDFH-------------IDINIKGVWNVTKAVLPEMIARKDGRIVMMSS---------- 141

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
               V GD           +V D       GE          +AY ++KA I   T+ LA
Sbjct: 142 ----VTGD-----------MVAD------PGE----------TAYALTKAAIVGLTKSLA 170

Query: 239 KRYPK--FCVNCVCPGFVKT 256
             Y +    VN +CPG+V+T
Sbjct: 171 VEYAQSGIRVNAICPGYVRT 190

Length = 263

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 72.5 bits (178), Expect = 6e-15
 Identities = 63/259 (24%), Positives = 96/259 (37%), Gaps = 73/259 (28%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFH 63
           + K A+VTG+++GIG    R+LA+ G  V +  A       E V +++A+G      +  
Sbjct: 4   SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRA---IAV 60

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWS 123
           Q D++D A+V+ L D  +T FG++D+L NNAG+  +   +  F    +  T         
Sbjct: 61  QADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLG-TIADFDLEDFDRT--------- 110

Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV 183
                        + TN  G             L    R++NLS+ V AL          
Sbjct: 111 -------------IATNLRGAFVVLREAAR--HLGQGGRIINLSTSVIALP--------- 146

Query: 184 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK--RY 241
                                             P    Y  SKA +     +LA   R 
Sbjct: 147 ---------------------------------LPGYGPYAASKAAVEGLVHVLANELRG 173

Query: 242 PKFCVNCVCPGFVKTDINF 260
               VN V PG V T++ F
Sbjct: 174 RGITVNAVAPGPVATELFF 192

Length = 245

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 72.2 bits (177), Expect = 6e-15
 Identities = 63/257 (24%), Positives = 100/257 (38%), Gaps = 70/257 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG++ GIG  T R LA++G  V + AR   R     ++L+A G    +L   +LD
Sbjct: 4   KVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVL---ELD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++D   V +  +      G+LDIL NNAGI  +             +   D   DW+++ 
Sbjct: 61  VTDEQQVDAAVERTVEALGRLDILVNNAGIMLLG-----------PVEDADT-TDWTRM- 107

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     + TN  G   T  A +P   L +   +VN+SS                  
Sbjct: 108 ----------IDTNLLGLMYTTHAALPHHLLRNKGTIVNISS------------------ 139

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK--RYPKF 244
                                   +A R    +S+ Y  +K  +NA++  L +       
Sbjct: 140 ------------------------VAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGV 175

Query: 245 CVNCVCPGFVKTDINFH 261
            V  + PG V T++  H
Sbjct: 176 RVVVIEPGTVDTELRDH 192

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 72.3 bits (177), Expect = 7e-15
 Identities = 64/261 (24%), Positives = 98/261 (37%), Gaps = 71/261 (27%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPEL 59
           M +   K A+VTG  KGIG      LA +G  VV+     K   E  V +L   G D   
Sbjct: 1   MVQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYA 60

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAE 119
           +   Q D+S +   + L +     FGK+DIL NNAGI           D  +   K    
Sbjct: 61  V---QADVSKVEDANRLVEEAVNHFGKVDILVNNAGITR---------DRTF---KKLNR 105

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK 179
            DW +V           +  N      T  A++P +  ++  R++++SS +         
Sbjct: 106 EDWERV-----------IDVNLSSVFNTTSAVLPYITEAEEGRIISISSII--------- 145

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
                                        G+    G     + Y  +KA +  +T+ LA 
Sbjct: 146 -----------------------------GQAGGFG----QTNYSAAKAGMLGFTKSLAL 172

Query: 240 RYPK--FCVNCVCPGFVKTDI 258
              K    VN +CPGF+ T++
Sbjct: 173 ELAKTNVTVNAICPGFIDTEM 193

Length = 247

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 72.4 bits (178), Expect = 8e-15
 Identities = 68/302 (22%), Positives = 105/302 (34%), Gaps = 86/302 (28%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
            K A+VTG+  GIG    R LA+ G  VV+    E+    A +    +G       +   
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVI---YLPA 57

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASV----KFDMDAFADSGYQITKGDAEVD 121
           D++    ++ +      +FG LDIL NNAGI  V    +F  +                D
Sbjct: 58  DVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPE----------------D 101

Query: 122 WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR 181
           W ++           +         T  A +P ++     R++N++S    L   P K  
Sbjct: 102 WDRI-----------IAVMLTSAFHTIRAALPHMKKQGWGRIINIAS-AHGLVASPFK-- 147

Query: 182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 241
                                                  SAY  +K  +   T++LA   
Sbjct: 148 ---------------------------------------SAYVAAKHGLIGLTKVLALEV 168

Query: 242 P--KFCVNCVCPGFVKT-----DINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKE 294
                 VN +CPG+V+T      I   A    + E  E  ++  +L  G PT RF    E
Sbjct: 169 AEHGITVNAICPGYVRTPLVEKQIADQAKTRGIPE--EQVIREVMLK-GQPTKRFVTVDE 225

Query: 295 EA 296
            A
Sbjct: 226 VA 227

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 4/97 (4%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFH 63
            +  A+VTG  +GIG    R LA+ G  + +    D++      ++L+A GV+   ++F 
Sbjct: 1   MRPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVE---VIFF 57

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVK 100
             D++DL++  ++ D  +  +G++D L NNAG+    
Sbjct: 58  PADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKV 94

Length = 256

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 10/96 (10%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL--KASGVDPELLLFHQ 64
           K A+VTG+++GIG  T R L ++G  V + ARDE R   A  +      G+         
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEGVLGL--------A 52

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVK 100
            D+ D A V    D ++  FG LD L NNAG+  +K
Sbjct: 53  GDVRDEADVRRAVDAMEEAFGGLDALVNNAGVGVMK 88

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 9/93 (9%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
          KK A+VTG++ GIG  T R+LA++G TV   AR     ++ +E L + GV P       L
Sbjct: 3  KKVALVTGASSGIGKATARRLAAQGYTVYGAARR----VDKMEDLASLGVHP-----LSL 53

Query: 66 DISDLASVSSLADFIKTQFGKLDILANNAGIAS 98
          D++D AS+ +  D I  + G++D+L NNAG  S
Sbjct: 54 DVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGS 86

Length = 273

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 71.2 bits (175), Expect = 2e-14
 Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 70/251 (27%)

Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
           ++TG+  G+G     + A +G  + L   +E+ G E ++ L+ +G D     + + D+ D
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDG---FYQRCDVRD 60

Query: 70  LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQT 129
            + +++LA   + ++G +D++ NNAG+AS  F    F +   +        DW       
Sbjct: 61  YSQLTALAQACEEKWGGIDVIVNNAGVASGGF----FEELSLE--------DWDWQ---- 104

Query: 130 YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN 189
                  +  N  G  + C+A +PL +   S R+VN++S ++ L   P            
Sbjct: 105 -------IAINLMGVVKGCKAFLPLFKRQKSGRIVNIAS-MAGLMQGPA----------- 145

Query: 190 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVN 247
                                          S+Y V+KA + A +  L          V+
Sbjct: 146 ------------------------------MSSYNVAKAGVVALSETLLVELADDEIGVH 175

Query: 248 CVCPGFVKTDI 258
            VCP F +T++
Sbjct: 176 VVCPSFFQTNL 186

Length = 270

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 70.9 bits (174), Expect = 2e-14
 Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 3/89 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          + A+VTGS +G+GFE  R LA  G  V++  R+      AV  L+A+G   E L F   D
Sbjct: 12 QVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAF---D 68

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAG 95
          I+D  +V++    I  + G+LDIL NN G
Sbjct: 69 IADEEAVAAAFARIDAEHGRLDILVNNVG 97

Length = 256

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 71.0 bits (174), Expect = 2e-14
 Identities = 60/252 (23%), Positives = 92/252 (36%), Gaps = 71/252 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTG+  GIG  T +  A +G  VV+  RD +        + A G         Q D
Sbjct: 6   RVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGR----AFARQGD 61

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +    +V +L DF+  ++G+LD+L NNAG          F   G  +T    E DW  V 
Sbjct: 62  VGSAEAVEALVDFVAARWGRLDVLVNNAG----------FGCGGTVVTT--DEADWDAV- 108

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     ++ N  G     +  IP+++      +VN +S +           A+ G 
Sbjct: 109 ----------MRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQL-----------ALAGG 147

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--F 244
                                             +AY  SK  I + TR +A  +     
Sbjct: 148 RGR-------------------------------AAYVASKGAIASLTRAMALDHATDGI 176

Query: 245 CVNCVCPGFVKT 256
            VN V PG + T
Sbjct: 177 RVNAVAPGTIDT 188

Length = 252

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 71.3 bits (175), Expect = 3e-14
 Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 6/99 (6%)

Query: 6  KKYAVVTGSNKGIGFETVRQL-----ASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          +K  +VTG+N G+G     +L      +  +T++L  R+ +R   A   L AS  D  ++
Sbjct: 1  RKVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVV 60

Query: 61 L-FHQLDISDLASVSSLADFIKTQFGKLDILANNAGIAS 98
            +  +D+S++ SV + A  +K ++ +LD L  NAGI  
Sbjct: 61 FDYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMP 99

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 71.2 bits (175), Expect = 3e-14
 Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 33/167 (19%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           KK A+VTG++ G G  T  +LA KG  V+ T R+ ++    + +     +  + +   QL
Sbjct: 3   KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNL-QQNIKVQQL 61

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D++D  S+ +    +K   G++D+L NNAG A+  F                 E      
Sbjct: 62  DVTDQNSIHNFQLVLKE-IGRIDLLVNNAGYANGGF----------------VE------ 98

Query: 126 CYQTYELAVECLK----TNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
                E+ VE  +    TN +G     +A++P +    S +++N+SS
Sbjct: 99  -----EIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISS 140

Length = 280

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG++ GIG  T  ++A  G TV L AR+ +   E V +++A G        +  D
Sbjct: 372 KVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGT---AHAYTCD 428

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAG 95
           ++D A+V      I  + G +D L NNAG
Sbjct: 429 LTDSAAVDHTVKDILAEHGHVDYLVNNAG 457

Length = 657

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 70.4 bits (173), Expect = 4e-14
 Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 6/91 (6%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A++TG   GIG ET RQ  ++G  V +T RD      ++E  +A   +  L++  + D
Sbjct: 7  KTALITGGTSGIGLETARQFLAEGARVAITGRDP----ASLEAARAELGESALVI--RAD 60

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGIA 97
            D+A+  +LA  +   FG+LD +  NAG+A
Sbjct: 61 AGDVAAQKALAQALAEAFGRLDAVFINAGVA 91

Length = 249

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 70.1 bits (172), Expect = 6e-14
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 2/91 (2%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K   VTG+  GIG  T  +LA++G  + LT RD     + V   +A G    +     LD
Sbjct: 1  KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG--GTVPEHRALD 58

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGIA 97
          ISD  +V++ A  I    G +D++ N AGI+
Sbjct: 59 ISDYDAVAAFAADIHAAHGSMDVVMNIAGIS 89

Length = 272

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 69.6 bits (171), Expect = 6e-14
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 3/97 (3%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
            ++TG   GIG     + A +G  VV+   +EK   E    ++ +G     + +++ D+S
Sbjct: 2   VLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGK---VHYYKCDVS 58

Query: 69  DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDA 105
               V   A  IK + G + IL NNAG+ S K  ++ 
Sbjct: 59  KREEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLEL 95

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 69.7 bits (171), Expect = 6e-14
 Identities = 65/262 (24%), Positives = 100/262 (38%), Gaps = 78/262 (29%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFH 63
             K A+VTG++ GIG     +LA+ G  VV+  R ++   E  VE++KA G      +  
Sbjct: 2   KGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKA---IAV 58

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGI----ASVKFDMDAFADSGYQITKGDAE 119
           Q D+S    V +L      +FG LDIL NNAG+    +S +  ++               
Sbjct: 59  QADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLE--------------- 103

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK 179
            DW+KV      + V  L   +   +   EA+    +     +++N+SS           
Sbjct: 104 -DWNKV------IDVN-LTGQFLCAR---EAIKRFRKSKIKGKIINMSS----------- 141

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
                        E+I                    W  H   Y  SK  +   T+ LA+
Sbjct: 142 -----------VHEKIP-------------------WPGH-VNYAASKGGVKMMTKTLAQ 170

Query: 240 RYP--KFCVNCVCPGFVKTDIN 259
            Y      VN + PG + T IN
Sbjct: 171 EYAPKGIRVNAIAPGAINTPIN 192

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 69.8 bits (171), Expect = 6e-14
 Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 29/171 (16%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL- 65
           + A++TG++KGIG    R+    G  V++ ARD     +A ++L     + E+   H L 
Sbjct: 10  QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREV---HGLA 66

Query: 66  -DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            D+SD     ++ D+++  +  L IL NNAG                 I K  A +D+++
Sbjct: 67  ADVSDDEDRRAILDWVEDHWDGLHILVNNAGG---------------NIRK--AAIDYTE 109

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD 175
             ++         +TN +   +      PLL+   S  +VN+ S VS L  
Sbjct: 110 DEWR------GIFETNLFSAFELSRYAHPLLKQHASSAIVNIGS-VSGLTH 153

Length = 257

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 69.2 bits (170), Expect = 7e-14
 Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 28/166 (16%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPEL-LLFHQ 64
            K+ ++TG + GIG    ++L  +G  V++ AR E +  EAVE+++A        + +  
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKF--DMDAFADSGYQITKGDAEVDW 122
            D+SD   V         + G  D++ N AGI+      D+ A                 
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTA----------------- 103

Query: 123 SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
                + +E  ++    NY+G+     A++PL++      +V +SS
Sbjct: 104 -----EEFERGMD---VNYFGSLNVAHAVLPLMKEQRPGHIVFVSS 141

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 69.4 bits (170), Expect = 8e-14
 Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 15/101 (14%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLT-------ARDEKRGLEAVEKLKASGVDPE 58
           K A+VTGS  GIG    R LA+ G  +VL            + GL A   +K       
Sbjct: 2  GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKV------ 55

Query: 59 LLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASV 99
            L+H  D+S  A++  +  + + QFG +DIL NNAGI  V
Sbjct: 56 --LYHGADLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHV 94

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 67.6 bits (166), Expect = 9e-14
 Identities = 36/165 (21%), Positives = 57/165 (34%), Gaps = 33/165 (20%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGL--EAVEKLKASGVDPELLLFH 63
              ++TG   G+G    R LA++G   +VL +R        E V +L+A G +       
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVT---VA 57

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWS 123
             D++D  ++++L   +    G LD + +NAG+     D     +               
Sbjct: 58  ACDVADRDALAALLAALPAALGPLDGVVHNAGVL----DDGPLEE--------------- 98

Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
                T E     L     G     E    L    D    V  SS
Sbjct: 99  ----LTPERFERVLAPKVTGAWNLHELTRDL----DLGAFVLFSS 135

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 69.2 bits (170), Expect = 9e-14
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 3/89 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTG ++G+G +    L   G  VVL+AR  +   EA   L+A G+D   +     D
Sbjct: 13 KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWI---AAD 69

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAG 95
          ++D A +  LA+    +FG +DIL NNAG
Sbjct: 70 VADEADIERLAEETLERFGHVDILVNNAG 98

Length = 259

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 68.8 bits (169), Expect = 1e-13
 Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 8/98 (8%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL---TARDEKRGLEAVEKLKASGVDPELLLFH 63
           K A+VTG+++GIG    ++LA  G +VV+   +++      E V +++A+G     +   
Sbjct: 4   KVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAE--EVVAEIEAAGGKAIAV--- 58

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKF 101
           Q D+SD + V+ L D  +  FG +DIL NNAG+   K 
Sbjct: 59  QADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKP 96

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 68.5 bits (168), Expect = 1e-13
 Identities = 61/274 (22%), Positives = 95/274 (34%), Gaps = 74/274 (27%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
            ++TG++ GIG    R+ A  G  V L AR   R  E   +L       E+     LD++
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEV---EILDVT 57

Query: 69  DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQ 128
           D      +   ++ + G LD++  NAG+               + T       +     +
Sbjct: 58  DEERNQLVIAELEAELGGLDLVIINAGV--------------GKGTSLGDLS-FKAF-RE 101

Query: 129 TYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE 188
           T +       TN  G     EA +P         LV +SS V+AL+ LP  A        
Sbjct: 102 TID-------TNLLGAAAILEAALPQFRAKGRGHLVLISS-VAALRGLPGAA-------- 145

Query: 189 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--FCV 246
                                            AY  SKA +++    L     K    V
Sbjct: 146 ---------------------------------AYSASKAALSSLAESLRYDVKKRGIRV 172

Query: 247 NCVCPGFVKTDIN---FHA-GILSVEEGAESPVK 276
             + PGF+ T +    F    ++SVE+ A+   K
Sbjct: 173 TVINPGFIDTPLTANMFTMPFLMSVEQAAKRIYK 206

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 69.3 bits (170), Expect = 2e-13
 Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 7/90 (7%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG   G+G ET R LA  G  V++ AR      EA+  +    V         LD
Sbjct: 27  KTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVM-------LD 79

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGI 96
           ++DL SV + A+       ++DIL NNAG+
Sbjct: 80  LADLESVRAFAERFLDSGRRIDILINNAGV 109

Length = 315

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 67.8 bits (166), Expect = 2e-13
 Identities = 64/255 (25%), Positives = 94/255 (36%), Gaps = 74/255 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG E  R LA  G  V L  R+     E +  L ASG D E       D
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNP----EDLAALSASGGDVEA---VPYD 53

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
             D     +L D ++ +FG++D+L +NAGI           +     +  + E  +S   
Sbjct: 54  ARDPEDARALVDALRDRFGRIDVLVHNAGIG----RPTTLRE----GSDAELEAHFSINV 105

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
               EL                 AL+P L  + S R+V L+S +S               
Sbjct: 106 IAPAELT---------------RALLPALREAGSGRVVFLNS-LS--------------- 134

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR--YPKF 244
                                 G+    G    ++ Y  SK  + A    L +       
Sbjct: 135 ----------------------GKRVLAG----NAGYSASKFALRALAHALRQEGWDHGV 168

Query: 245 CVNCVCPGFVKTDIN 259
            V+ VCPGFV T + 
Sbjct: 169 RVSAVCPGFVDTPMA 183

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 69.9 bits (172), Expect = 2e-13
 Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 4/94 (4%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+  GIG  T ++LA++G  VVL   DE+    A  +L          L    D
Sbjct: 423 KVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDR----ALGVACD 478

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK 100
           ++D A+V +  +     FG +DI+ +NAGIA   
Sbjct: 479 VTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISG 512

Length = 681

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 67.3 bits (165), Expect = 3e-13
 Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 28/164 (17%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           T    ++TG   GIG    R+    G TV++T R E+R  EA ++L         +    
Sbjct: 4   TGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPN-------IHTIV 56

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           LD+ D  SV +LA+ + +++  LDIL NNAGI     D     D    + K D E+D   
Sbjct: 57  LDVGDAESVEALAEALLSEYPNLDILINNAGI-QRPID---LRDPASDLDKADTEID--- 109

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
                         TN  G  +  +A +P L+      +VN+SS
Sbjct: 110 --------------TNLIGPIRLIKAFLPHLKKQPEATIVNVSS 139

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 3e-13
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 6/93 (6%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           + K AVVTG   GIG       A+KG  V L  R E      V ++ A  +         
Sbjct: 14  SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSE-----DVAEVAAQ-LLGGNAKGLV 67

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIA 97
            D+SD  SV +    + + FG++DIL N+AG+A
Sbjct: 68  CDVSDSQSVEAAVAAVISAFGRIDILVNSAGVA 100

Length = 255

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 3e-13
 Identities = 73/303 (24%), Positives = 107/303 (35%), Gaps = 79/303 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+ +GIG    R  A +G  V L   D      A   +        +L     D
Sbjct: 8   KVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPA-D 66

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++D ASV++     +  FG LD+L NNAGI       + FAD    +   D   DW +  
Sbjct: 67  VTDAASVAAAVAAAEEAFGPLDVLVNNAGI-------NVFADP---LAMTDE--DWRR-- 112

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                    C   +  G    C A++P +       +VN++S   A K +          
Sbjct: 113 ---------CFAVDLDGAWNGCRAVLPGMVERGRGSIVNIAS-THAFKII---------- 152

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PK-F 244
                                          P    Y V+K  +   TR L   Y  +  
Sbjct: 153 -------------------------------PGCFPYPVAKHGLLGLTRALGIEYAARNV 181

Query: 245 CVNCVCPGFVKTDINFHAGILSVEE-GAESPVKLALLPDGGPTGR--------FFLRKEE 295
            VN + PG+++T +       +  +  A     LAL P     GR         FL  +E
Sbjct: 182 RVNAIAPGYIETQLT-EDWWNAQPDPAAARAETLALQP-MKRIGRPEEVAMTAVFLASDE 239

Query: 296 APF 298
           APF
Sbjct: 240 APF 242

Length = 260

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 67.5 bits (165), Expect = 4e-13
 Identities = 63/260 (24%), Positives = 89/260 (34%), Gaps = 69/260 (26%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
               + K A+VTG   GIG  T    A +G  VV+  RD   G E V  ++ +G +    
Sbjct: 2   SMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEA--- 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
           LF   D++  A V +L +     +G+LD   NNAGI   +         G      +AE 
Sbjct: 59  LFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQ---------GRLAEGSEAEF 109

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
           D               +  N  G     +  IPL+       +VN +S            
Sbjct: 110 DA-------------IMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTAS------------ 144

Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                                         +A  G  P  S Y  SK  +   T+  A  
Sbjct: 145 ------------------------------VAGLGAAPKMSIYAASKHAVIGLTKSAAIE 174

Query: 241 YPK--FCVNCVCPGFVKTDI 258
           Y K    VN VCP  + TD+
Sbjct: 175 YAKKGIRVNAVCPAVIDTDM 194

Length = 253

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 67.7 bits (166), Expect = 4e-13
 Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 8/104 (7%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  VVTG+ +GIG E  R+L ++G  + L   +E   L A+    A     + +L    D
Sbjct: 10  KVVVVTGAARGIGAELARRLHARGAKLALVDLEEAE-LAALA---AELGGDDRVLTVVAD 65

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIAS----VKFDMDAF 106
           ++DLA++ + A+    +FG +D++  NAGIAS     + D DAF
Sbjct: 66  VTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAF 109

Length = 296

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 67.1 bits (164), Expect = 4e-13
 Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 10/123 (8%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPEL 59
           M +   K A+VTGS++GIG +T + LA  G  VV+  R    R  + V +++A+G     
Sbjct: 1   MGDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASA 60

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQIT-KGDA 118
           +     D++D  SV++L D  + +FG LD L  NA        M++  D  Y +    DA
Sbjct: 61  V---GADLTDEESVAALMDTAREEFGGLDALVLNA-----SGGMESGMDEDYAMRLNRDA 112

Query: 119 EVD 121
           + +
Sbjct: 113 QRN 115

Length = 248

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 66.8 bits (164), Expect = 4e-13
 Identities = 48/173 (27%), Positives = 71/173 (41%), Gaps = 38/173 (21%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K  +VTG+N+GIG   V QL ++G   V   ARD     E+V  L    V P      QL
Sbjct: 7   KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD----PESVTDL-GPRVVPL-----QL 56

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D++D ASV++ A+        + IL NNAGI      +                      
Sbjct: 57  DVTDPASVAAAAE----AASDVTILVNNAGIFRTGSLLLE-------------------- 92

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
                +     ++TNY+G      A  P+L  +    +VN+ S V +  + P 
Sbjct: 93  --GDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLS-VLSWVNFPN 142

Length = 238

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 67.1 bits (164), Expect = 5e-13
 Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 71/253 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG  KGIG+  V +LA  G  V   AR++K   E + + +  G   E       D
Sbjct: 7   KTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGS---VCD 63

Query: 67  ISDLASVSSLADFIKTQF-GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           +S  +    L D + + F GKL+IL NNAG    K   D   +            D+S +
Sbjct: 64  VSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEE------------DYSLI 111

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      + TN+           PLL+ S +  +V +SS V+ +  +         
Sbjct: 112 -----------MSTNFEAAYHLSRLAHPLLKASGNGNIVFISS-VAGVIAV--------- 150

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK-- 243
                                           P  + Y  +K  +N  TR LA  + K  
Sbjct: 151 --------------------------------PSGAPYGATKGALNQLTRSLACEWAKDN 178

Query: 244 FCVNCVCPGFVKT 256
             VN V P  + T
Sbjct: 179 IRVNAVAPWVIAT 191

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 67.9 bits (166), Expect = 5e-13
 Identities = 71/313 (22%), Positives = 109/313 (34%), Gaps = 66/313 (21%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K   V+TG++ G+G    + LA +G   VV+  RD  +  +A +++   G+  +      
Sbjct: 1   KGTVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEV---GMPKDSYSVLH 57

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            D++ L SV    D  +     LD L  NA +         F   G+++T G        
Sbjct: 58  CDLASLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVG-------- 109

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--SPRLVNLSSYVSALKDLPEKA-- 180
                          N+ G       L+  L+ S+  SPR+V + S       L      
Sbjct: 110 --------------VNHLGHFLLTNLLLEDLQRSENASPRIVIVGSITHNPNTLAGNVPP 155

Query: 181 RAVLGDVENL--TEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
           RA LGD+E L    +    ++     D  E E A         AYK SK      T  L 
Sbjct: 156 RATLGDLEGLAGGLKGFNSMI-----DGGEFEGAK--------AYKDSKVCNMLTTYELH 202

Query: 239 KRY---PKFCVNCVCPG------------------FVKTDINFHAGILSVEEGAESPVKL 277
           +R         N + PG                  F         G +S EE  E    +
Sbjct: 203 RRLHEETGITFNSLYPGCIAETGLFREHYPLFRTLFPPFQKYITKGYVSEEEAGERLAAV 262

Query: 278 ALLPDGGPTGRFF 290
              P  G +G ++
Sbjct: 263 IADPSLGVSGVYW 275

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 66.3 bits (162), Expect = 9e-13
 Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 8/91 (8%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          + AV+TG   GIG  T R+LA++G TVV+   D + G  A +++          LF   D
Sbjct: 8  RVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGG--------LFVPTD 59

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGIA 97
          ++D  +V++L D     +G +DI  NNAGI+
Sbjct: 60 VTDEDAVNALFDTAAETYGSVDIAFNNAGIS 90

Length = 255

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 66.4 bits (162), Expect = 9e-13
 Identities = 58/254 (22%), Positives = 85/254 (33%), Gaps = 72/254 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+  GIG     +LA +G  VV+   D       V ++    +        ++D
Sbjct: 4   KVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALAL------RVD 57

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++D   V++L +    +FG LD+L NNAG   +             I   D    W +  
Sbjct: 58  VTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLT----------PAIIDTDLA-VWDQT- 105

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     +  N  GT   C    P +       +VNLSS                  
Sbjct: 106 ----------MAINLRGTFLCCRHAAPRMIARGGGSIVNLSS------------------ 137

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV 246
                                   IA +   P   AY  SKA I   TR LA       +
Sbjct: 138 ------------------------IAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGI 173

Query: 247 NC--VCPGFVKTDI 258
            C  + PG + T +
Sbjct: 174 RCNALAPGLIDTPL 187

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 66.5 bits (163), Expect = 9e-13
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 7/90 (7%)

Query: 10 VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
           +TG  +GIG  T R LA+ G  V +   DE          K +  +  L++   LD++D
Sbjct: 9  AITGGARGIGLATARALAALGARVAIGDLDE-------ALAKETAAELGLVVGGPLDVTD 61

Query: 70 LASVSSLADFIKTQFGKLDILANNAGIASV 99
           AS ++  D ++   G +D+L NNAG+  V
Sbjct: 62 PASFAAFLDAVEADLGPIDVLVNNAGVMPV 91

Length = 273

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 70/254 (27%), Positives = 106/254 (41%), Gaps = 52/254 (20%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M++  K   ++TG++ G+G    + LA +G  V++  R+ K+   A ++L   G+ P+  
Sbjct: 1   MSQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL---GIPPDSY 57

Query: 61  LFHQLDISDLASVSSLADFIKTQFGK-LDILANNAGIASVKFDMDAFADSGYQITKGDAE 119
               +D+ DL SV    D  +   GK LD L  NA +                      E
Sbjct: 58  TIIHIDLGDLDSVRRFVDDFR-ALGKPLDALVCNAAVYMPLLK----------------E 100

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS--DSPRLVNLSSYVSALKDL- 176
              S    Q YEL++    TN+ G    C  L+  L+ S    PRLV L +  +  K+L 
Sbjct: 101 PLRSP---QGYELSM---ATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELG 154

Query: 177 ---PEKARAVLGDVENLTE---ERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVI 230
              P  A A LGD+          I M      K ++ G+           AYK SK + 
Sbjct: 155 GKIPIPAPADLGDLSGFEAGFKAPISMADG---KKFKPGK-----------AYKDSK-LC 199

Query: 231 NAYT-RILAKRYPK 243
           N  T R L +RY +
Sbjct: 200 NMLTMRELHRRYHE 213

Length = 322

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 65.1 bits (159), Expect = 2e-12
 Identities = 64/263 (24%), Positives = 97/263 (36%), Gaps = 72/263 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++ G+++GIG E VRQ  + G  V+ TARD      A+  L+A G +        LD
Sbjct: 2   KTVLIVGASRGIGREFVRQYRADGWRVIATARDA----AALAALQALGAEA-----LALD 52

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++D ASV+ LA   K     LD     AG+           +    IT+ D +       
Sbjct: 53  VADPASVAGLA--WKLDGEALDAAVYVAGV------YGPRTEGVEPITREDFD------- 97

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                 AV  + TN  G  Q    L+PL+E +    L  LSS + ++ D           
Sbjct: 98  ------AV--MHTNVLGPMQLLPILLPLVEAAGG-VLAVLSSRMGSIGDATG-------- 140

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV 246
                                       GW      Y+ SKA +N   R  + +      
Sbjct: 141 --------------------------TTGWL-----YRASKAALNDALRAASLQARHATC 169

Query: 247 NCVCPGFVKTDINFHAGILSVEE 269
             + PG+V+TD+      L   +
Sbjct: 170 IALHPGWVRTDMGGAQAALDPAQ 192

Length = 222

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 65.1 bits (159), Expect = 2e-12
 Identities = 40/176 (22%), Positives = 69/176 (39%), Gaps = 32/176 (18%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             K  +VTG+N+GIG   V  L + G   V  A  +      +       V P  L    
Sbjct: 2   KDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRL---- 57

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            D++D  S+ + A   K     +D++ NNAG+      ++  A    +            
Sbjct: 58  -DVTDPESIKAAAAQAK----DVDVVINNAGVLKPATLLEEGALEALKQE---------- 102

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
                       +  N +G  +  +A  P+L+ +    +VNL+S V++LK+ P   
Sbjct: 103 ------------MDVNVFGLLRLAQAFAPVLKANGGGAIVNLNS-VASLKNFPAMG 145

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 65.6 bits (160), Expect = 2e-12
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG  +GIG     +LA  G  V +   +E+   E  +++  +G      + ++LD
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKA---VAYKLD 57

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK 100
           +SD   V S  D    +FG  D++ NNAG+A + 
Sbjct: 58  VSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPIT 91

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 65.8 bits (161), Expect = 2e-12
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M +   K AV+TG+  G G    R  A+ G+ +VL    +     AV +L+A G +   +
Sbjct: 1   MKDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAE---V 57

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKF 101
           L  + D+SD A V +LAD    +FG + +L NNAG+ +   
Sbjct: 58  LGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGL 98

Length = 287

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 65.5 bits (160), Expect = 2e-12
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)

Query: 2   AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLL 61
            + T K  ++TG++ GIG     Q A +G TVV  AR E       +++  +G D     
Sbjct: 36  VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMA-- 93

Query: 62  FHQLDISDLASVSSLADFIKTQFGKLDILANNAG 95
               D+SDL +V +L   ++ + G +DIL NNAG
Sbjct: 94  -VPCDLSDLDAVDALVADVEKRIGGVDILINNAG 126

Length = 293

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 65.6 bits (160), Expect = 2e-12
 Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 4/96 (4%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          M     K AV+TG++ GIG  +   LA +G  V+     E    E V+K+K++G   +  
Sbjct: 1  MKRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVS-ETVDKIKSNGGKAKA- 58

Query: 61 LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGI 96
            + +DISD   V   A  IK QFG++D+L NNAG+
Sbjct: 59 --YHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGV 92

Length = 272

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 4/99 (4%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPEL 59
          M     K A+VTG  +G+G    R  A +G   +V+  R+ ++G     +L+A G     
Sbjct: 1  MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKA-- 58

Query: 60 LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIAS 98
           +F Q D+SD+     +       FG+LD L N AG+  
Sbjct: 59 -VFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTD 96

Length = 260

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 64.8 bits (158), Expect = 3e-12
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA--SGVDPE 58
           M     + A+VTG++ GIG    R L   G+ VV  AR     ++ +E L A        
Sbjct: 1   MERWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARR----VDKIEALAAECQSAGYP 56

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMD 104
            L  +Q D+S+   + S+   I+TQ   +D+  NNAG+A  +  + 
Sbjct: 57  TLFPYQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLS 102

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 64.2 bits (157), Expect = 4e-12
 Identities = 70/291 (24%), Positives = 112/291 (38%), Gaps = 87/291 (29%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQ 64
              A++TG++ GIG  T    A  G  + L AR +   LEA+  +L+++GV       + 
Sbjct: 6   MPRALITGASSGIGKATALAFAKAGWDLALVARSQDA-LEALAAELRSTGVK---AAAYS 61

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV---D 121
           +D+S+  +++     +  QFG  D+L NN             A   Y  T    E+   D
Sbjct: 62  IDLSNPEAIAPGIAELLEQFGCPDVLINN-------------AGMAY--TGPLLEMPLSD 106

Query: 122 WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR 181
           W  V           ++ N     Q C A++P +       ++N+SS             
Sbjct: 107 WQWV-----------IQLNLTSVFQCCSAVLPGMRARGGGLIINVSS------------- 142

Query: 182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK-- 239
                                        IA R   P   AY VSKA + A+T+ LA+  
Sbjct: 143 -----------------------------IAARNAFPQWGAYCVSKAALAAFTKCLAEEE 173

Query: 240 RYPKFCVNCVCPGFVKTDI--------NF-HAGILSVEEGAESPVKLALLP 281
           R     V  +  G V T +        +F  + +LS E+ A++ + LA LP
Sbjct: 174 RSHGIRVCTITLGAVNTPLWDTETVQADFDRSAMLSPEQVAQTILHLAQLP 224

Length = 241

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 64.3 bits (157), Expect = 4e-12
 Identities = 57/248 (22%), Positives = 90/248 (36%), Gaps = 56/248 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG+   IG    + L S G  ++L   +     +  E+L     +   ++  +LD
Sbjct: 3   KIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNR--VIALELD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           I+   S+  L +    +FG++DIL NNA   S K     F +                  
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYP-SPKVWGSRFEE------------------ 101

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
              YE   E L  N  G     +A I L +      ++N++S                  
Sbjct: 102 -FPYEQWNEVLNVNLGGAFLCSQAFIKLFKKQGKGSIINIAS------------------ 142

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC- 245
                   I  V+   F+ YE  ++ +         Y V KA I   T+ LAK Y     
Sbjct: 143 --------IYGVIAPDFRIYENTQMYS------PVEYSVIKAGIIHLTKYLAKYYADTGI 188

Query: 246 -VNCVCPG 252
            VN + PG
Sbjct: 189 RVNAISPG 196

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 64.5 bits (158), Expect = 5e-12
 Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 34/164 (20%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             K A+VTG++ GIG  T  +LA  G  V  T+R+  R         A+ +    LL  +
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPAR---------AAPIPGVELL--E 51

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           LD++D ASV +  D +  + G++D+L NNAG+                   G AE     
Sbjct: 52  LDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLA----------------GAAE----- 90

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
               +   A     TN +G  +   A++P +    S R++N+SS
Sbjct: 91  --ESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISS 132

Length = 270

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 64.3 bits (157), Expect = 5e-12
 Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 4/96 (4%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-LKASGVDPELLLFHQ 64
            K A++TG+ +GIG     +LA+ G  +VL   + +   ++  + +  +G +    +   
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYN---AVAVG 58

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVK 100
            D++D   V +L D    +FG  D++ NNAGIA + 
Sbjct: 59  ADVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPIT 94

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 63.9 bits (156), Expect = 5e-12
 Identities = 67/285 (23%), Positives = 108/285 (37%), Gaps = 78/285 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+  G G    R+ A +G  VV+   +        E++ A     E  +  Q D
Sbjct: 6   KVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGA----ERVAAD--IGEAAIAIQAD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++  A V ++ +   ++FG+LDIL NNAGI      M        ++     E ++ +V 
Sbjct: 60  VTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPML-------EVD----EEEFDRV- 107

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                 AV   K+ Y   +    AL+P +E      ++N++S  + L+  P         
Sbjct: 108 -----FAVNV-KSIYLSAQ----ALVPHMEEQGGGVIINIAS-TAGLRPRP--------- 147

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KF 244
              LT                        W      Y  SK  +   T+ +A        
Sbjct: 148 --GLT------------------------W------YNASKGWVVTATKAMAVELAPRNI 175

Query: 245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
            VNC+CP   +T       +LS+  G ++P   A      P GR 
Sbjct: 176 RVNCLCPVAGET------PLLSMFMGEDTPENRAKFRATIPLGRL 214

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 64.1 bits (157), Expect = 6e-12
 Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 12/92 (13%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          + K   VTG+ +GIG+         G  V     D                +        
Sbjct: 7  SGKTVWVTGAAQGIGYAVALAFVEAGAKV--IGFD----------QAFLTQEDYPFATFV 54

Query: 65 LDISDLASVSSLADFIKTQFGKLDILANNAGI 96
          LD+SD A+V+ +   +  + G LD+L N AGI
Sbjct: 55 LDVSDAAAVAQVCQRLLAETGPLDVLVNAAGI 86

Length = 252

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 63.6 bits (155), Expect = 6e-12
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)

Query: 10 VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
          V+TG++ GIG  T    A +G  VVL AR  +   E   +++  G +    +    D++D
Sbjct: 4  VITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGE---AIAVVADVAD 60

Query: 70 LASVSSLADFIKTQFGKLDILANNAGIA 97
           A V   AD    +FG++D   NNAG+A
Sbjct: 61 AAQVERAADTAVERFGRIDTWVNNAGVA 88

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 63.9 bits (156), Expect = 7e-12
 Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 5/92 (5%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFH 63
          T K A+VTG+++GIG    + LA +G  V++++R +  G +AV + + A+G   E L  H
Sbjct: 7  TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSR-KLDGCQAVADAIVAAGGKAEALACH 65

Query: 64 QLDISDLASVSSLADFIKTQFGKLDILANNAG 95
             I ++  + +L   I+ + G+LDIL NNA 
Sbjct: 66 ---IGEMEQIDALFAHIRERHGRLDILVNNAA 94

Length = 252

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 64.0 bits (156), Expect = 7e-12
 Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 4/91 (4%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
          A+VTG+++GIG     +LA++G  + +    D+ +  E V ++ A+G       + Q DI
Sbjct: 4  AIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAI---YFQADI 60

Query: 68 SDLASVSSLADFIKTQFGKLDILANNAGIAS 98
           +L+   +L D     FG+LD L NNAGIA 
Sbjct: 61 GELSDHEALLDQAWEDFGRLDCLVNNAGIAV 91

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 63.8 bits (156), Expect = 8e-12
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 2/89 (2%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A +TG   GIG    +  A  G +V +  R  +    A E++ ++          Q D
Sbjct: 4  KVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSAT--GGRAHPIQCD 61

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAG 95
          + D  +V +  D    +FGK+DIL NNA 
Sbjct: 62 VRDPEAVEAAVDETLKEFGKIDILINNAA 90

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 64.2 bits (156), Expect = 8e-12
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL--KASGVDPELLLFHQ 64
           K  ++TG+N GIGFET R  A  G  V+L  R+  R   AV ++  +      E +    
Sbjct: 2   KVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAM---T 58

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           LD++ L SV   A+  K +   L +L  NA + +            + +T+   E  + +
Sbjct: 59  LDLASLRSVQRFAEAFKAKNSPLHVLVCNAAVFA----------LPWTLTEDGLETTF-Q 107

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
           V +  +   V+ L+               +L  S   R++ +SS      DLP+
Sbjct: 108 VNHLGHFYLVQLLED--------------VLRRSAPARVIVVSSESHRFTDLPD 147

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 63.5 bits (155), Expect = 9e-12
 Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 8/107 (7%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           K A+VTG ++GIG    R LA  G  V +      R  E  E+L K  GV  +    ++ 
Sbjct: 9   KVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTK---AYKC 65

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVK----FDMDAFAD 108
           D+S   SV      I+  FGK+DIL  NAGI   K    +  + +  
Sbjct: 66  DVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNK 112

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 63.5 bits (155), Expect = 1e-11
 Identities = 42/172 (24%), Positives = 58/172 (33%), Gaps = 34/172 (19%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK---RGLEAVEKLKASGVDP 57
           +        +VTG   GIG       A  G  V +    E         +   K +    
Sbjct: 6   LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATV- 64

Query: 58  ELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGD 117
                   D++D A V  + D    +FG LD+L NNAGIA     +D        IT   
Sbjct: 65  -------ADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDE-------IT--- 107

Query: 118 AEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR-LVNLSS 168
               W +            L  N  G      A +PLL+ S     ++ LSS
Sbjct: 108 -PEQWEQT-----------LAVNLNGQFYFARAAVPLLKASGHGGVIIALSS 147

Length = 264

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 3/90 (3%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  VVTG+  GIG ET    A +G  VV +  DE       E ++A+G        +++D
Sbjct: 316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHA---YRVD 372

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGI 96
           +SD  ++ + A++++ + G  DI+ NNAGI
Sbjct: 373 VSDADAMEAFAEWVRAEHGVPDIVVNNAGI 402

Length = 582

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 8/92 (8%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-GVDPELLLFH 63
            K  ++TG++KGIG       A++G  + L ARD          L+A+ GVD  +   H
Sbjct: 6  AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAV---H 62

Query: 64 QLDISDLASVSSLADFIKTQFGKLDILANNAG 95
           LD+S   +   LA     + G +DIL NNAG
Sbjct: 63 ALDLSSPEAREQLA----AEAGDIDILVNNAG 90

Length = 259

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 63.4 bits (155), Expect = 2e-11
 Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 5/90 (5%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE-AVEKLKASGVDPELLLFHQLDI 67
           V+TG++ G+G  T R  A +G  VVL AR E  GLE    +++A+G +    L    D+
Sbjct: 11 VVITGASAGVGRATARAFARRGAKVVLLARGE-EGLEALAAEIRAAGGEA---LAVVADV 66

Query: 68 SDLASVSSLADFIKTQFGKLDILANNAGIA 97
          +D  +V + AD  + + G +D   NNA + 
Sbjct: 67 ADAEAVQAAADRAEEELGPIDTWVNNAMVT 96

Length = 334

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 62.5 bits (152), Expect = 2e-11
 Identities = 70/284 (24%), Positives = 103/284 (36%), Gaps = 72/284 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG   GIG  T R  A  G  VV+   D+  G +AV    A+ +    + F   D
Sbjct: 5   KVAIITGGASGIGEATARLFAKHGARVVIADIDDDAG-QAV----AAELGDPDISFVHCD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++  A V +  D    +FG+LDI+ NNAG+              Y I +   E ++ +V 
Sbjct: 60  VTVEADVRAAVDTAVARFGRLDIMFNNAGVLGA---------PCYSILETSLE-EFERV- 108

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                L V  +   + GTK     +IP    +    +V+++S              V+G 
Sbjct: 109 -----LDVN-VYGAFLGTKHAARVMIP----AKKGSIVSVASVAG-----------VVG- 146

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC- 245
                                       G  PH  AY  SK  +   TR  A    +   
Sbjct: 147 ----------------------------GLGPH--AYTASKHAVLGLTRSAATELGEHGI 176

Query: 246 -VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGR 288
            VNCV P  V T +      +  E   E+    A L   G   R
Sbjct: 177 RVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANL--KGTALR 218

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 61.7 bits (150), Expect = 3e-11
 Identities = 59/253 (23%), Positives = 97/253 (38%), Gaps = 68/253 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG+++G+G    R  A +G  VV+   +  R  E+ E + A   +  + +  Q D
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVV---NYYRSTESAEAVAAEAGERAIAI--QAD 55

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           + D   V ++ +  K  FG +D + NNA +    FD D          K    +DW    
Sbjct: 56  VRDRDQVQAMIEEAKNHFGPVDTIVNNA-LIDFPFDPDQ--------RKTFDTIDWED-- 104

Query: 127 YQT-YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
           YQ   E AV+       G     +A++P  +   S R++N+ +                 
Sbjct: 105 YQQQLEGAVK-------GALNLLQAVLPDFKERGSGRVINIGT----------------- 140

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
              NL +     VV   + DY                    KA +  +TR +AK    + 
Sbjct: 141 ---NLFQNP---VV--PYHDYTTA-----------------KAALLGFTRNMAKELGPYG 175

Query: 245 -CVNCVCPGFVKT 256
             VN V  G +K 
Sbjct: 176 ITVNMVSGGLLKV 188

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 61.7 bits (150), Expect = 4e-11
 Identities = 60/256 (23%), Positives = 99/256 (38%), Gaps = 71/256 (27%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFH 63
           + K A+VTGS++GIG     +LA +G  + +  AR  K   E  E+++A G     +   
Sbjct: 3   SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAV--- 59

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWS 123
           + ++ D+  +  +   I  +FG+LD+  NNA    ++  M+   +S +         DW 
Sbjct: 60  KANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAME-LEESHW---------DW- 108

Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV 183
                        +  N        +    L+E     ++++LSS               
Sbjct: 109 ------------TMNINAKALLFCAQEAAKLMEKVGGGKIISLSS--------------- 141

Query: 184 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA-KRYP 242
           LG +              Y ++Y              +   VSKA + A TR LA +  P
Sbjct: 142 LGSIR-------------YLENY--------------TTVGVSKAALEALTRYLAVELAP 174

Query: 243 K-FCVNCVCPGFVKTD 257
           K   VN V  G V TD
Sbjct: 175 KGIAVNAVSGGAVDTD 190

Length = 250

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 62.9 bits (153), Expect = 4e-11
 Identities = 63/252 (25%), Positives = 97/252 (38%), Gaps = 78/252 (30%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
             +TG  +GIG     + A+ G  +++  RD     E  +KL  +  D  L +  Q DI+
Sbjct: 272 VAITGGARGIGRAVADRFAAAGDRLLIIDRDA----EGAKKLAEALGDEHLSV--QADIT 325

Query: 69  DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQ 128
           D A+V S    I+ ++G+LD+L NNAGIA      + F  S                   
Sbjct: 326 DEAAVESAFAQIQARWGRLDVLVNNAGIA------EVFKPS------------------- 360

Query: 129 TYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL--GD 186
                           +Q+ E    + +       VNLS   +  +     AR +   G 
Sbjct: 361 ---------------LEQSAEDFTRVYD-------VNLSGAFACAR---AAARLMSQGGV 395

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--F 244
           + NL                  G IA+    P  +AY  SKA +   +R LA  +     
Sbjct: 396 IVNL------------------GSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGI 437

Query: 245 CVNCVCPGFVKT 256
            VN V PG+++T
Sbjct: 438 RVNTVAPGYIET 449

Length = 520

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 61.5 bits (150), Expect = 4e-11
 Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 3/91 (3%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           +VTG+ +GIG+   R LA  G  V    R+ ++ LE V  L+  G        ++LD++
Sbjct: 1  VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFAT---YKLDVA 57

Query: 69 DLASVSSLADFIKTQFGKLDILANNAGIASV 99
          D A+V  +   ++ ++G +D+L N AGI  +
Sbjct: 58 DSAAVDEVVQRLEREYGPIDVLVNVAGILRL 88

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 61.3 bits (149), Expect = 5e-11
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 3/96 (3%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          M     K A+VTG+  GIG      LA +G +VV+   + +      +++ A G      
Sbjct: 1  MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTA--- 57

Query: 61 LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGI 96
          +  Q+D+SD  S  ++AD   + FG +D L NNA I
Sbjct: 58 IAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAI 93

Length = 250

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 61.1 bits (149), Expect = 6e-11
 Identities = 57/253 (22%), Positives = 98/253 (38%), Gaps = 68/253 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG++ GIG  T R+ A  G  ++LT R  +R L+ +     +    ++L   QLD
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAER-LQELADELGAKFPVKVLPL-QLD 58

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +SD  S+ +  + +  +F  +DIL NNAG+A     +D   +            DW  + 
Sbjct: 59  VSDRESIEAALENLPEEFRDIDILVNNAGLA---LGLDPAQE--------ADLEDWETM- 106

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     + TN  G                   L+N++  +  L  +  + +   G 
Sbjct: 107 ----------IDTNVKG-------------------LLNVTRLI--LPIMIARNQ---GH 132

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKF 244
           + NL                  G IA R      + Y  +KA +  ++  L K       
Sbjct: 133 IINL------------------GSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGI 174

Query: 245 CVNCVCPGFVKTD 257
            V  + PG V+T+
Sbjct: 175 RVTNIEPGLVETE 187

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 61.1 bits (149), Expect = 6e-11
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 3/96 (3%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          M     K A++TG++ GIG    +  A +G  VV+ AR +    + V +++A G +    
Sbjct: 1  MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEA--- 57

Query: 61 LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGI 96
          +    D+ D A   +L      +FG LDI  NNAG 
Sbjct: 58 VALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGT 93

Length = 254

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 60.8 bits (148), Expect = 7e-11
 Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 4/90 (4%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
          + A+VT S+ GIG      LA +G  + +T   DE+   E  E++++ GV  E+    QL
Sbjct: 3  QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEI---RQL 59

Query: 66 DISDLASVSSLADFIKTQFGKLDILANNAG 95
          D+SDL   +   D +  + G++D+L NNAG
Sbjct: 60 DLSDLPEGAQALDKLIQRLGRIDVLVNNAG 89

Length = 256

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 60.8 bits (148), Expect = 7e-11
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 7/91 (7%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
          AVVTG   G+G  TV +L ++G  VV+       G E V KL  +        F  +D++
Sbjct: 5  AVVTGGASGLGLATVERLLAQGAKVVILDLPNSPG-ETVAKLGDNCR------FVPVDVT 57

Query: 69 DLASVSSLADFIKTQFGKLDILANNAGIASV 99
              V +     K +FG+LDI+ N AGIA  
Sbjct: 58 SEKDVKAALALAKAKFGRLDIVVNCAGIAVA 88

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 60.7 bits (148), Expect = 8e-11
 Identities = 45/171 (26%), Positives = 65/171 (38%), Gaps = 30/171 (17%)

Query: 11  VTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL 70
           +TG+  GIG  T    A++G  V     +E      +  L A  +         LD++D 
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINE----AGLAALAAE-LGAGNAWTGALDVTDR 60

Query: 71  ASVS-SLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQT 129
           A+   +LADF     G+LD+L NNAGI         F D                     
Sbjct: 61  AAWDAALADFAAATGGRLDVLFNNAGILR----GGPFED-------------------IP 97

Query: 130 YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
            E     +  N  G      A +P L+ +   R++N SS  SA+   P  A
Sbjct: 98  LEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSS-ASAIYGQPGLA 147

Length = 260

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 60.7 bits (148), Expect = 8e-11
 Identities = 71/261 (27%), Positives = 96/261 (36%), Gaps = 80/261 (30%)

Query: 11  VTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV--EKLKASGVDPELLLFHQLDIS 68
           VTG+  GIG E     A  G TV+L  R E++ LEAV  E   A G  P ++        
Sbjct: 17  VTGAGDGIGREAALTYARHGATVILLGRTEEK-LEAVYDEIEAAGGPQPAIIPL------ 69

Query: 69  DLASVSS-----LADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWS 123
           DL + +      LAD I+ QFG+LD + +NAG+      M+       Q         W 
Sbjct: 70  DLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPME-------QQD----PEVWQ 118

Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV 183
            V           ++ N   T    +AL+PLL  S +  LV  SS V        + RA 
Sbjct: 119 DV-----------MQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGR------QGRA- 160

Query: 184 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-- 241
                                           W     AY VSK       ++LA  Y  
Sbjct: 161 -------------------------------NW----GAYAVSKFATEGMMQVLADEYQG 185

Query: 242 PKFCVNCVCPGFVKTDINFHA 262
               VNC+ PG  +T +   A
Sbjct: 186 TNLRVNCINPGGTRTAMRASA 206

Length = 247

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 61.4 bits (149), Expect = 1e-10
 Identities = 64/259 (24%), Positives = 99/259 (38%), Gaps = 72/259 (27%)

Query: 3   EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +A  +  +VTG+  GIG    ++ A  G  VV+  R+ +R  E  + L   G D   L  
Sbjct: 2   KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHAL-- 56

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDW 122
             +D+SD A +    + +  +FG++D+L NNAG+      M A  D              
Sbjct: 57  -AMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPT--MTATLD-------------- 99

Query: 123 SKVCYQTYELAVECLKTNYYGTKQ-TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR 181
                 T E        N  G      EAL  ++E      +VN++S  + L  LP++  
Sbjct: 100 -----TTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVAS-GAGLVALPKR-- 151

Query: 182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 241
                                                  +AY  SKA + + TR LA  +
Sbjct: 152 ---------------------------------------TAYSASKAAVISLTRSLACEW 172

Query: 242 -PK-FCVNCVCPGFVKTDI 258
             K   VN V PG+V+T +
Sbjct: 173 AAKGIRVNAVLPGYVRTQM 191

Length = 520

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 59.9 bits (146), Expect = 1e-10
 Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 11/91 (12%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          T +  +VTG  +GIG    R   + G TVV+  R                VD     FH 
Sbjct: 5  TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRA-----------PETVDGRPAEFHA 53

Query: 65 LDISDLASVSSLADFIKTQFGKLDILANNAG 95
           D+ D   V++L D I  + G+LD+L NNAG
Sbjct: 54 ADVRDPDQVAALVDAIVERHGRLDVLVNNAG 84

Length = 252

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 54/190 (28%), Positives = 77/190 (40%), Gaps = 36/190 (18%)

Query: 11  VTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL 70
           +TG+  GIG ET    A  G  V L   DE  GL A+    A+ +  E ++   LD++D 
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDED-GLAAL----AAELGAENVVAGALDVTDR 59

Query: 71  AS-VSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQT 129
           A+  ++LADF     G+LD L NNAG+         F D                     
Sbjct: 60  AAWAAALADFAAATGGRLDALFNNAGVGRGGP----FED-------------------VP 96

Query: 130 YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA------RAV 183
                  +  N  G      A +P L+ +   R++N +S  SA+   P+ A       AV
Sbjct: 97  LAAHDRMVDINVKGVLNGAYAALPYLKATPGARVINTAS-SSAIYGQPDLAVYSATKFAV 155

Query: 184 LGDVENLTEE 193
            G  E L  E
Sbjct: 156 RGLTEALDVE 165

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 59.6 bits (145), Expect = 2e-10
 Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 6/94 (6%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          M     K A+VTG    IG    R L + G  V +   D   G      + AS    E  
Sbjct: 1  MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNG----AAVAAS--LGERA 54

Query: 61 LFHQLDISDLASVSSLADFIKTQFGKLDILANNA 94
           F   DI+D A++      +  +FG++DIL N A
Sbjct: 55 RFIATDITDDAAIERAVATVVARFGRVDILVNLA 88

Length = 261

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 56/253 (22%), Positives = 94/253 (37%), Gaps = 69/253 (27%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           KK A+VTG+ +GIG    R+L + G  V+ T         A +  +  G   + +   +L
Sbjct: 2   KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDC--AKDWFEEYGFTEDQVRLKEL 59

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D++D    +     I+ + G +DIL NNAGI         F    +Q        +W+ V
Sbjct: 60  DVTDTEECAEALAEIEEEEGPVDILVNNAGITRDS----VFKRMSHQ--------EWNDV 107

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      + TN        + L   +      R++N+SS V+ LK           
Sbjct: 108 -----------INTNLNSVFNVTQPLFAAMCEQGYGRIINISS-VNGLK----------- 144

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                  G+          + Y  +KA +  +T+ LA    ++ 
Sbjct: 145 -----------------------GQFGQ-------TNYSAAKAGMIGFTKALASEGARYG 174

Query: 245 -CVNCVCPGFVKT 256
             VNC+ PG++ T
Sbjct: 175 ITVNCIAPGYIAT 187

Length = 245

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 59.5 bits (144), Expect = 2e-10
 Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG   GIG +        G  VV    DE+RG +  E        P L   H  D
Sbjct: 2   KVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEG-----PNLFFVH-GD 55

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK 100
           ++D   V  +   +  + G++D+L NNA   S  
Sbjct: 56  VADETLVKFVVYAMLEKLGRIDVLVNNAARGSKG 89

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K  V+TG  +G+G      LA KG  + L   ++++  EAV +  A G +   +  +  +
Sbjct: 6  KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTE---VRGYAAN 62

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGI 96
          ++D   V +    I   FG+L+ L NNAGI
Sbjct: 63 VTDEEDVEATFAQIAEDFGQLNGLINNAGI 92

Length = 253

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 59.4 bits (144), Expect = 3e-10
 Identities = 59/252 (23%), Positives = 95/252 (37%), Gaps = 70/252 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + AVVTG+ +G+G       A  G  V++ AR E +  E  E+++A+G    ++     D
Sbjct: 11  QVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVA---AD 67

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++   + + LA      FG+LDI+ NN G             +                 
Sbjct: 68  LAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPN----PLLST----------------- 106

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPL-LELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
             T +LA +    N         A +PL LE S    ++N+SS +               
Sbjct: 107 -STKDLA-DAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTM--------------- 149

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKF 244
                                  G +A RG+    +AY  +KA +  YTR+ A    P+ 
Sbjct: 150 -----------------------GRLAGRGF----AAYGTAKAALAHYTRLAALDLCPRI 182

Query: 245 CVNCVCPGFVKT 256
            VN + PG + T
Sbjct: 183 RVNAIAPGSILT 194

Length = 263

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 58.9 bits (143), Expect = 3e-10
 Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A++TG++ GIGF   +  A  G T+V    +++   + +   +  G++    +    D
Sbjct: 11 KIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVC---D 67

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGI 96
          ++D   V ++   I+ + G +DIL NNAGI
Sbjct: 68 VTDEDGVQAMVSQIEKEVGVIDILVNNAGI 97

Length = 265

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 58.9 bits (143), Expect = 4e-10
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 14/105 (13%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL--KASGVDPE 58
           M     K A++TG+  GIG     +  ++G  VV+      R   A  ++   A  V   
Sbjct: 1   MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAV--- 57

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDM 103
                 LD++   S+  +      +FG +DIL NNA +    FDM
Sbjct: 58  -----SLDVTRQDSIDRIVAAAVERFGGIDILFNNAAL----FDM 93

Length = 257

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 58.7 bits (142), Expect = 5e-10
 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 3/87 (3%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
          A+VTG+  GIG    R+L  +G+ V + AR E+     V++L+ +GV+ +       D+ 
Sbjct: 6  ALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRT---CDVR 62

Query: 69 DLASVSSLADFIKTQFGKLDILANNAG 95
           +  + +L      ++G +D+L NNAG
Sbjct: 63 SVPEIEALVAAAVARYGPIDVLVNNAG 89

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 58.4 bits (142), Expect = 5e-10
 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 4/90 (4%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K  +VTG   GIG     +LA +G   V+  R      E  E+L+A     E   F Q+D
Sbjct: 8  KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSA-PDDEFAEELRALQPRAE---FVQVD 63

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGI 96
          ++D A      +    +FG++D L NNAG+
Sbjct: 64 LTDDAQCRDAVEQTVAKFGRIDGLVNNAGV 93

Length = 258

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 59.1 bits (144), Expect = 7e-10
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 16/95 (16%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL----TARDEKRGLEAV-EKLKASGVDPELLL 61
           K A+VTG+ +GIG      LA  G  VV      A +    L AV  ++  + +      
Sbjct: 211 KVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEA---LAAVANRVGGTAL------ 261

Query: 62  FHQLDISDLASVSSLADFIKTQFGKLDILANNAGI 96
              LDI+   + + +A+ +  + G LDI+ +NAGI
Sbjct: 262 --ALDITAPDAPARIAEHLAERHGGLDIVVHNAGI 294

Length = 450

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 57.9 bits (140), Expect = 8e-10
 Identities = 59/255 (23%), Positives = 84/255 (32%), Gaps = 72/255 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K   +TG   G+G  T   LA++G  V L  R      + +  + A  +         +D
Sbjct: 8   KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALR-----IGGID 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           + D  +     D +  QFG+LD L N AG     F     AD       GDA+  W ++ 
Sbjct: 63  LVDPQAARRAVDEVNRQFGRLDALVNIAGA----FVWGTIAD-------GDAD-TWDRM- 109

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                        N   T    +A +P L  S   R+VN+ +  +ALK            
Sbjct: 110 ----------YGVNVKTTLNASKAALPALTASGGGRIVNIGA-GAALK------------ 146

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KF 244
                                    A  G      AY  +KA +   T  LA        
Sbjct: 147 -------------------------AGPGM----GAYAAAKAGVARLTEALAAELLDRGI 177

Query: 245 CVNCVCPGFVKTDIN 259
            VN V P  + T  N
Sbjct: 178 TVNAVLPSIIDTPPN 192

Length = 239

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 57.8 bits (140), Expect = 8e-10
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K  ++TGS +GIGF     LA  G  +++     +R   AV KL+  G+      F   +
Sbjct: 10 KNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPF---N 66

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGI 96
          ++    V +  + I+   G +D+L NNAGI
Sbjct: 67 VTHKQEVEAAIEHIEKDIGPIDVLINNAGI 96

Length = 254

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 58.2 bits (141), Expect = 8e-10
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K AV+TG    +G    R LA  G  V    R++++G +  +++ A G      +    D
Sbjct: 6  KVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRA---IALAAD 62

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAG 95
          + D AS+    + I  QFG +DIL N AG
Sbjct: 63 VLDRASLERAREEIVAQFGTVDILINGAG 91

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 57.7 bits (140), Expect = 8e-10
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 7   KYAVVTGS-NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K  +VT +   GIG  T R+   +G  VV++   E+R  E  ++L A        +   +
Sbjct: 18  KVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAE--LGLGRVEAVV 75

Query: 66  -DISDLASVSSLADFIKTQFGKLDILANNAGI 96
            D++  A V +L D    + G+LD+L NNAG+
Sbjct: 76  CDVTSEAQVDALIDAAVERLGRLDVLVNNAGL 107

Length = 262

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 57.9 bits (140), Expect = 9e-10
 Identities = 67/311 (21%), Positives = 105/311 (33%), Gaps = 92/311 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
                 K A+VTG ++GIG   V +L  +G  V+     E      V+  K         
Sbjct: 1   DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-DVDYFK--------- 50

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
               +D+S+   V    D++ +++G++DIL NNAGI S            Y       E 
Sbjct: 51  ----VDVSNKEQVIKGIDYVISKYGRIDILVNNAGIES------------YGAIHAVEED 94

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
           +W ++           +  N  G     +  IP +   D   ++N++S  S         
Sbjct: 95  EWDRI-----------INVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQS--------- 134

Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                                            R    +++AY  SK  +   TR +A  
Sbjct: 135 -----------------------------FAVTR----NAAAYVTSKHAVLGLTRSIAVD 161

Query: 241 Y-PKFCVNCVCPGFVKTDINFHAGILSV------------EEGAESPVKLALLPDGGPTG 287
           Y P      VCPG ++T +   A  L V            E G   P+K    P+     
Sbjct: 162 YAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYV 221

Query: 288 RFFLRKEEAPF 298
             FL  + A F
Sbjct: 222 VAFLASDLASF 232

Length = 258

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 57.5 bits (139), Expect = 1e-09
 Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K   +TGS+ G+G    R L  +G  VVL AR +KR  +A          P        
Sbjct: 7  MKRIFITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAAC------PGAAGVLIG 60

Query: 66 DISDLASVSSLADFIKTQFGKLDILANNAGI 96
          D+S LA    LAD +    G+ D + +NAGI
Sbjct: 61 DLSSLAETRKLADQVNA-IGRFDAVIHNAGI 90

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 59/267 (22%), Positives = 94/267 (35%), Gaps = 71/267 (26%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPEL- 59
           MA    +  ++TG + G+G     +LA+ G  V++      RG    + + A+G++    
Sbjct: 1   MASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAV-AAGIEAAGG 59

Query: 60  -LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA 118
             L    D+ D A+  +  D    +FG+LDIL NNAGIA+        +           
Sbjct: 60  KALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDA-AFAELSIE--------- 109

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALI-PLLELSDSPRLVNLSSYVSALKDLP 177
             +W  V           +  N  G     +A + P++      R+VN++S         
Sbjct: 110 --EWDDV-----------IDVNLDGFFNVTQAALPPMIRARRGGRIVNIAS--------- 147

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
                                          G   NRG       Y  SKA +   T+ L
Sbjct: 148 -----------------------------VAGVRGNRGQVN----YAASKAGLIGLTKTL 174

Query: 238 AKRYPKF--CVNCVCPGFVKTDINFHA 262
           A         VN V PG + T +  +A
Sbjct: 175 ANELAPRGITVNAVAPGAINTPMADNA 201

Length = 249

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 56.8 bits (137), Expect = 2e-09
 Identities = 57/249 (22%), Positives = 86/249 (34%), Gaps = 66/249 (26%)

Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
           +VTG++ GIG E     A  G TV+L  R+E++  +  + +   G          L    
Sbjct: 8   LVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILDLLTCT 67

Query: 70  LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQT 129
             +   LA  I   + +LD + +NAG+      + +  +             W  V    
Sbjct: 68  SENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPL-SEQNPQ----------VWQDV---- 112

Query: 130 YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVEN 189
                   + N   T    +AL+PLL  SD+  LV  SS V        + RA  G    
Sbjct: 113 -------XQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVG------RQGRANWG---- 155

Query: 190 LTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VN 247
                                           AY VSK       ++LA  Y +    VN
Sbjct: 156 --------------------------------AYAVSKFATEGLXQVLADEYQQRNLRVN 183

Query: 248 CVCPGFVKT 256
           C+ PG  +T
Sbjct: 184 CINPGGTRT 192

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 57/257 (22%), Positives = 94/257 (36%), Gaps = 73/257 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG + G G    ++L S G TV+     +       ++L+   V  + L   QLD
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNG--PGAKELR--RVCSDRLRTLQLD 56

Query: 67  ISDLASVSSLADFIKTQFGKLDI--LANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           ++    +   A ++K   G+  +  L NNAGI                   GD E     
Sbjct: 57  VTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGF---------------GGDEE--LL- 98

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
                 +   +C++ N +GT +  +A +PLL  +   R+VN+SS              + 
Sbjct: 99  ----PMDDYRKCMEVNLFGTVEVTKAFLPLLRRAKG-RVVNVSS--------------MG 139

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
           G V                              P   AY  SKA + A++  L +    +
Sbjct: 140 GRVPF----------------------------PAGGAYCASKAAVEAFSDSLRRELQPW 171

Query: 245 C--VNCVCPGFVKTDIN 259
              V+ + PG  KT I 
Sbjct: 172 GVKVSIIEPGNFKTGIT 188

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 57.2 bits (138), Expect = 2e-09
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          M+    K AVVTG+  GIG E   +LA  G  V +   ++       +++  +G      
Sbjct: 2  MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGK---A 58

Query: 61 LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASV 99
          +   +D+++  +V++  D +  +FG +DIL +NAGI  V
Sbjct: 59 IGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIV 97

Length = 262

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 15/102 (14%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL------------EAVEKLKAS 53
            K A VTG+++GIG     +LA  G TVV+ A+    G             E  E+++A+
Sbjct: 3   GKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAA 62

Query: 54  GVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAG 95
           G      L   +D+ D   V +L +    QFG+LDIL NNAG
Sbjct: 63  GGQA---LPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAG 101

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 62/255 (24%), Positives = 96/255 (37%), Gaps = 76/255 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITV-VLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A++TG  +GIG         +G  V VL    E    E    L+  GV        + 
Sbjct: 8   KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKE----LREKGV-----FTIKC 58

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D+ +   V    + ++ +FG++D+L NNAGI       + F +  Y              
Sbjct: 59  DVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIM-YLMPFEEFDEEKYN------------- 104

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                    + +K N  G   T    +PLL+LS +  +VN++S             A +G
Sbjct: 105 ---------KMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIAS------------NAGIG 143

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC 245
                                     A  G    ++ Y ++KA I   TR LA    K+ 
Sbjct: 144 -------------------------TAAEG----TTFYAITKAGIIILTRRLAFELGKYG 174

Query: 246 --VNCVCPGFVKTDI 258
             VN V PG+V+TD+
Sbjct: 175 IRVNAVAPGWVETDM 189

Length = 255

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 3/93 (3%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            K A+VTG+ +GIGF   ++L   G  V +   +E+    A +KL   G     +   +
Sbjct: 1  MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAV---K 57

Query: 65 LDISDLASVSSLADFIKTQFGKLDILANNAGIA 97
           D+SD   V +    +   FG L+++ NNAG+A
Sbjct: 58 ADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVA 90

Length = 256

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 17/120 (14%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG + GIG   V++L + G  VV               +       E   F   D
Sbjct: 10  KIIIVTGGSSGIGLAIVKELLANGANVV------------NADIHGGDGQHENYQFVPTD 57

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFA-DSGYQITKGDAEVDWSKV 125
           +S    V+     I  +FG++D L NNAGI   +  +D       Y++     E  + K+
Sbjct: 58  VSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYEL----NEAAFDKM 113

Length = 266

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 56.3 bits (136), Expect = 3e-09
 Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 4/91 (4%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQL 65
          K  V+TG + G+G     +   +   VV+  R DE+   +  E++K +G +   +   + 
Sbjct: 8  KVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAV---KG 64

Query: 66 DISDLASVSSLADFIKTQFGKLDILANNAGI 96
          D++  + V +L      +FG LD++ NNAGI
Sbjct: 65 DVTVESDVVNLIQTAVKEFGTLDVMINNAGI 95

Length = 261

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 56.3 bits (136), Expect = 3e-09
 Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 3/92 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTG++ G+G    + LA  G  VVL +R  +R  E   +++A G    ++    LD
Sbjct: 10 KVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVV---SLD 66

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGIAS 98
          ++D  S+ +     +T+ G +DIL NN+G+++
Sbjct: 67 VTDYQSIKAAVAHAETEAGTIDILVNNSGVST 98

Length = 258

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 57.2 bits (138), Expect = 3e-09
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 4/114 (3%)

Query: 2   AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELL 60
               ++ A VTG   GIG ET R+LA++G  VVL   + +       ++    G    + 
Sbjct: 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVA 469

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQIT 114
           L  ++D++D  +V +    +   +G +DI+ NNAGIA+     +      +Q+ 
Sbjct: 470 L--KMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSS-PFEETTLQEWQLN 520

Length = 676

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 3e-09
 Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 3/89 (3%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
          +K  ++TG + G+G    ++ A +G  VV+T R +++  EA  +++     P  +L  Q+
Sbjct: 1  EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQ---FPGQVLTVQM 57

Query: 66 DISDLASVSSLADFIKTQFGKLDILANNA 94
          D+ +   V  + + I  +FG++D L NNA
Sbjct: 58 DVRNPEDVQKMVEQIDEKFGRIDALINNA 86

Length = 252

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 12/92 (13%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTG  KGIG  TV +L   G  VV TAR                  PE + F   D
Sbjct: 10 KRALVTGGTKGIGAATVARLLEAGARVVTTAR------------SRPDDLPEGVEFVAAD 57

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGIAS 98
          ++     +++A  +  + G +DIL +  G +S
Sbjct: 58 LTTAEGCAAVARAVLERLGGVDILVHVLGGSS 89

Length = 260

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 55.6 bits (134), Expect = 5e-09
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 6/107 (5%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             K  ++TG   G+G  T  +LA +G  + L   +E+ GLEA +           +L  +
Sbjct: 2   KDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEE-GLEAAKAALLEIAPDAEVLLIK 60

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGI-----ASVKFDMDAF 106
            D+SD A V +  D    QFG++D   NNAGI      +  F  D F
Sbjct: 61  ADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEF 107

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 54.7 bits (132), Expect = 7e-09
 Identities = 56/255 (21%), Positives = 95/255 (37%), Gaps = 71/255 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQL 65
           + A+VTG   GIG    ++LA  G  V      +E+R    +++  A G D  ++   + 
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVV---EG 57

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D+S   S  +    ++ + G +D+L NNAGI         F    Y+         WS V
Sbjct: 58  DVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDAT----FKKMTYE--------QWSAV 105

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      + TN        + +I  +      R++N+SS V+  K           
Sbjct: 106 -----------IDTNLNSVFNVTQPVIDGMRERGWGRIINISS-VNGQK----------- 142

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                  G+    G   +S+A    KA +  +T+ LA+      
Sbjct: 143 -----------------------GQF---GQTNYSAA----KAGMIGFTKALAQEGATKG 172

Query: 245 -CVNCVCPGFVKTDI 258
             VN + PG++ TD+
Sbjct: 173 VTVNTISPGYIATDM 187

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 54.9 bits (133), Expect = 8e-09
 Identities = 66/286 (23%), Positives = 110/286 (38%), Gaps = 87/286 (30%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH- 63
           T++  ++TG++ G+G    R+ A+KG  + L AR   R  + +E+LKA     ELL  + 
Sbjct: 1   TRQKILITGASSGLGAGMAREFAAKGRDLALCAR---R-TDRLEELKA-----ELLARYP 51

Query: 64  -------QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKG 116
                   LD++D   V  +    + + G LD +  NAGI             G ++  G
Sbjct: 52  GIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIG-----------KGARLGTG 100

Query: 117 DAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDL 176
               +       T E       TN+      CEA + +     S  LV +SS VSA++ L
Sbjct: 101 KFWAN-----KATAE-------TNFVAALAQCEAAMEIFREQGSGHLVLISS-VSAVRGL 147

Query: 177 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI 236
           P                                           +AY  SKA + +    
Sbjct: 148 PG----------------------------------------VKAAYAASKAGVASLGEG 167

Query: 237 LAKRYPK--FCVNCVCPGFVKTDINFHAG----ILSVEEGAESPVK 276
           L     K    V+ + PG++++++N  A     ++  E G ++ VK
Sbjct: 168 LRAELAKTPIKVSTIEPGYIRSEMNAKAKSTPFMVDTETGVKALVK 213

Length = 248

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 54.7 bits (132), Expect = 8e-09
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 4/94 (4%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG   GIG    ++LA++G  VV+   D     E  EK+  +       L  Q D
Sbjct: 2   KVALVTGGASGIGLAIAKRLAAEGAAVVVADIDP----EIAEKVAEAAQGGPRALGVQCD 57

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK 100
           ++  A V S  +    +FG LDI+ +NAGIA+  
Sbjct: 58  VTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSS 91

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 54.8 bits (132), Expect = 8e-09
 Identities = 64/256 (25%), Positives = 85/256 (33%), Gaps = 76/256 (29%)

Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
           V+TG+  GIG  T   L   G TV+    D +                        D+S 
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVI--GIDLREA------------------DVIADLST 42

Query: 70  LASVSSL-ADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQ 128
               ++  AD +    G LD L N AG+             G     G            
Sbjct: 43  PEGRAAAIADVLARCSGVLDGLVNCAGV-------------GGTTVAGLV---------- 79

Query: 129 TYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA--LKDLPEKARAVLGD 186
                   LK NY+G +   EAL+P L     P  V +SS   A   +D  E A+A+   
Sbjct: 80  --------LKVNYFGLRALMEALLPRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAG 131

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC- 245
               TE R                +A     P   AY  SK  +  +TR  A     +  
Sbjct: 132 ----TEAR-------------AVALAEHAGQPGYLAYAGSKEALTVWTRRRA-ATWLYGA 173

Query: 246 ---VNCVCPGFVKTDI 258
              VN V PG V+T I
Sbjct: 174 GVRVNTVAPGPVETPI 189

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 54.5 bits (131), Expect = 1e-08
 Identities = 63/283 (22%), Positives = 96/283 (33%), Gaps = 80/283 (28%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           A+VTG   GIG      LA  G +VV+     +        ++ +G     L   + +++
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGL---ECNVT 58

Query: 69  DLASVSSLADFIKTQFGKLDILANNAGIASVK-FDMDAFADSGYQITKGDAEVDWSKVCY 127
               + ++     +QFG + IL NNAG    K FDM         +T+ D E  +    +
Sbjct: 59  SEQDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMP--------MTEEDFEWAFKLNLF 110

Query: 128 QTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV 187
             + L+  C                P ++ +    ++N+SS  S  K+            
Sbjct: 111 SAFRLSQLCA---------------PHMQKAGGGAILNISSMSSENKN------------ 143

Query: 188 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFC 245
                                            +AY  SKA +N  TR LA         
Sbjct: 144 ------------------------------VRIAAYGSSKAAVNHMTRNLAFDLGPKGIR 173

Query: 246 VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGR 288
           VN V PG VKTD         +E         A+L    P GR
Sbjct: 174 VNAVAPGAVKTDALASVLTPEIER--------AMLKH-TPLGR 207

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 59/252 (23%), Positives = 96/252 (38%), Gaps = 74/252 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG ++GIG    +     G  V+++AR  +   +A E+L A G      +    D
Sbjct: 7   KIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGE----CIAIPAD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +S    + +L   +  +  +LD+L NNAG A+    ++AF +SG           W KV 
Sbjct: 63  LSSEEGIEALVARVAERSDRLDVLVNNAG-ATWGAPLEAFPESG-----------WDKV- 109

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELS----DSPRLVNLSSYVSALKDLPEKARA 182
                     +  N        +AL+PLL  +    +  R++N+ S              
Sbjct: 110 ----------MDINVKSVFFLTQALLPLLRAAATAENPARVINIGS-------------- 145

Query: 183 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP 242
                       I  +V    ++Y               +Y  SKA ++  TR LAK   
Sbjct: 146 ------------IAGIVVSGLENY---------------SYGASKAAVHQLTRKLAKELA 178

Query: 243 --KFCVNCVCPG 252
                VN + PG
Sbjct: 179 GEHITVNAIAPG 190

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 28/159 (17%)

Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
           ++TG++ GIG      LA+ G  ++L  R+     E +E L A    P    +   D++ 
Sbjct: 9   LLTGASGGIGQALAEALAAAGARLLLVGRNA----EKLEALAARLPYPGRHRWVVADLTS 64

Query: 70  LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQT 129
            A   ++    + + G +++L NNAG+    F +    D    I                
Sbjct: 65  EAGREAVLARAR-EMGGINVLINNAGVNH--FALLEDQDP-EAIE--------------- 105

Query: 130 YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
                  L  N     Q   AL+PLL    S  +VN+ S
Sbjct: 106 -----RLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGS 139

Length = 263

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 53.7 bits (129), Expect = 2e-08
 Identities = 32/91 (35%), Positives = 43/91 (47%), Gaps = 4/91 (4%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITV-VLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
            A+VTG ++GIG  T   LA +G TV V   ++     E V  +  +G    +L   Q 
Sbjct: 2  AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVL---QA 58

Query: 66 DISDLASVSSLADFIKTQFGKLDILANNAGI 96
          DISD   V ++   I      L  L NNAGI
Sbjct: 59 DISDENQVVAMFTAIDQHDEPLAALVNNAGI 89

Length = 247

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 53.4 bits (128), Expect = 2e-08
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          + A+VTG+ +GIG      L ++G  VVL   D +RG       K +    E   F  +D
Sbjct: 11 RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERG------SKVAKALGENAWFIAMD 64

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGIA 97
          ++D A V++    +  QFG+LD L  NA IA
Sbjct: 65 VADEAQVAAGVAEVLGQFGRLDALVCNAAIA 95

Length = 255

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 3e-08
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 12/103 (11%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG++ GIG      LA +G  VV  AR+      A+++L        L    +LD
Sbjct: 10  KSVLVTGASSGIGRACAVALAQRGARVVAAARNAA----ALDRLAGETGCEPL----RLD 61

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADS 109
           + D A++ +         G  D L N AGIAS++  +D  A+ 
Sbjct: 62  VGDDAAIRAALA----AAGAFDGLVNCAGIASLESALDMTAEG 100

Length = 245

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 52.8 bits (127), Expect = 4e-08
 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 7/91 (7%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQL 65
          K A+VTG+N G+G      LA  G  +V   R E     + VE L          L    
Sbjct: 6  KVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRR------FLSLTA 59

Query: 66 DISDLASVSSLADFIKTQFGKLDILANNAGI 96
          D+SD+ ++ +L D    +FG +DIL NNAGI
Sbjct: 60 DLSDIEAIKALVDSAVEEFGHIDILVNNAGI 90

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 52.8 bits (127), Expect = 4e-08
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 28/158 (17%)

Query: 11  VTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL 70
           +TG   GIG    ++    G TV++  R+E+R L   +        PE+      D++D 
Sbjct: 10  ITGGASGIGLALAKRFLELGNTVIICGRNEER-LAEAKAEN-----PEIHTE-VCDVADR 62

Query: 71  ASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTY 130
            S   L +++K ++  L++L NNAGI                     AE           
Sbjct: 63  DSRRELVEWLKKEYPNLNVLINNAGIQ-------------RNEDLTGAE--------DLL 101

Query: 131 ELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
           + A + + TN     +    L+P L       ++N+SS
Sbjct: 102 DDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSS 139

Length = 245

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 52.5 bits (126), Expect = 5e-08
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 7/104 (6%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQ 64
           +K  ++TG+++GIG  T    A +G  V L     +   EAV + ++  G +    L   
Sbjct: 2   RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEA---LAVA 58

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKF---DMDA 105
            D++D A V  L + +  + G+LD L NNAGI   +     MDA
Sbjct: 59  ADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDA 102

Length = 248

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 6/108 (5%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
           K A+VTG+++GIG     QL   G TV +T R     L    E+++A G     +   + 
Sbjct: 4   KIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPV---RC 60

Query: 66  DISDLASVSSLADFI-KTQFGKLDILANNAGIASVKFDMDAFADSGYQ 112
           D SD   V +L + + + Q G+LDIL NNA  A+V+  +   A   ++
Sbjct: 61  DHSDDDEVEALFERVAREQQGRLDILVNNA-YAAVQLILVGVAKPFWE 107

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 52.5 bits (126), Expect = 5e-08
 Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 5/98 (5%)

Query: 1  MAEATK---KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDP 57
          MA   +   K  +VTG ++GIG   VR     G  VV  AR E  G     +L  +G  P
Sbjct: 1  MASGLRYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAG--P 58

Query: 58 ELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAG 95
              F   D++    + +L      +FG++D L NNAG
Sbjct: 59 GSCKFVPCDVTKEEDIKTLISVTVERFGRIDCLVNNAG 96

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 52.3 bits (126), Expect = 5e-08
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQL 65
            A+VTG+ K IG      LA++G  VV+     E       ++L A      L+   Q 
Sbjct: 1  AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLV---QA 57

Query: 66 DISDLASVSSLADFIKTQFGKLDILANNAGI 96
          D+SD A+ + L       FG+ D+L NNA  
Sbjct: 58 DLSDFAACADLVAAAFRAFGRCDVLVNNASA 88

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 52.6 bits (127), Expect = 6e-08
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K AV+TG    +G    ++LA  G  V +  R++++    V ++KA+G +    L  + D
Sbjct: 11 KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEA---LAVKAD 67

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAG 95
          + D  S+      I   FG  DIL N AG
Sbjct: 68 VLDKESLEQARQQILEDFGPCDILINGAG 96

Length = 278

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 6e-08
 Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 29/164 (17%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            +K   +TG+++G G         +G  VV TARD     +  EK        + LL   
Sbjct: 2   MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY------GDRLLPLA 55

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           LD++D A+V +  +     FG+LDI+ NNAG                       EV  S+
Sbjct: 56  LDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGM---------------IEEVTESE 100

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
              Q        + TN++G     +A++P L    S  ++ +SS
Sbjct: 101 ARAQ--------IDTNFFGALWVTQAVLPYLREQRSGHIIQISS 136

Length = 275

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 52.1 bits (125), Expect = 6e-08
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 4/89 (4%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K  VVTG+ +GIG     +LA +G  V+L  R E    E + ++ A+G   +    H  D
Sbjct: 5  KVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSEL-VHEVLAEILAAG---DAAHVHTAD 60

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAG 95
          +   A    +      +FG++D+L NN G
Sbjct: 61 LETYAGAQGVVRAAVERFGRVDVLINNVG 89

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 52.5 bits (126), Expect = 6e-08
 Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 4/94 (4%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG   GIG   VR     G  V +    +  G    + L   G +P +  FH  D
Sbjct: 19  KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSL---GGEPNVCFFH-CD 74

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK 100
           ++    VS   DF   +FG LDI+ NNAG+    
Sbjct: 75  VTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPP 108

Length = 280

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 53.1 bits (128), Expect = 6e-08
 Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)

Query: 10  VVTGSNKGIGFETVRQLASK-GITVVLTAR-----DEKRGLEAVEKLKASGVDPELLLFH 63
           +VTG   GIG    R LA + G  +VL  R     +E+   + +  L+A G     +L+ 
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGAR---VLYI 265

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMD 104
             D++D A+V  L + ++ ++G +D + + AG+        
Sbjct: 266 SADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQ 306

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.5 bits (124), Expect = 9e-08
 Identities = 63/279 (22%), Positives = 96/279 (34%), Gaps = 87/279 (31%)

Query: 3   EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           E   K  ++TG+  GIG    R   ++G  V         G++  +K   SG       F
Sbjct: 2   EFMTKTVLITGAASGIGLAQARAFLAQGAQVY--------GVDKQDKPDLSGN----FHF 49

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDW 122
            QLD+SD   +  L D++      +DIL N AGI      +D      Y+     +  +W
Sbjct: 50  LQLDLSD--DLEPLFDWV----PSVDILCNTAGI------LD-----DYKPLLDTSLEEW 92

Query: 123 SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA 182
             +             TN   T     A +P +    S  ++N+ S              
Sbjct: 93  QHI-----------FDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIA------------ 129

Query: 183 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP 242
                                       +A  G     +AY  SK  +  +T+ LA  Y 
Sbjct: 130 --------------------------SFVAGGG----GAAYTASKHALAGFTKQLALDYA 159

Query: 243 KFC--VNCVCPGFVKTDIN---FHAGILSVEEGAESPVK 276
           K    V  + PG VKT +    F  G L+     E+P+K
Sbjct: 160 KDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIK 198

Length = 235

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 44/177 (24%), Positives = 68/177 (38%), Gaps = 26/177 (14%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  VV+G   G+G     + A  G  VVL AR  +R  E   ++   G      L    D
Sbjct: 6   KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRR---ALAVPTD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           I+D    ++L      +FG++D L NNA      F + +         K  A+ D     
Sbjct: 63  ITDEDQCANLVALALERFGRVDALVNNA------FRVPSM--------KPLADAD----- 103

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV 183
           +  +   +E    N  GT +  +A  P L  S    +V ++S V         A  +
Sbjct: 104 FAHWRAVIE---LNVLGTLRLTQAFTPALAESGGS-IVMINSMVLRHSQPKYGAYKM 156

Length = 258

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 6/93 (6%)

Query: 4  ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
          ++ K  ++TG + G G    +   + G  VV T R E     A    +A    P+  L  
Sbjct: 2  SSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSE----AARADFEAL--HPDRALAR 55

Query: 64 QLDISDLASVSSLADFIKTQFGKLDILANNAGI 96
           LD++D  ++ ++    +  FG +D+L NNAG 
Sbjct: 56 LLDVTDFDAIDAVVADAEATFGPIDVLVNNAGY 88

Length = 277

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 41/170 (24%)

Query: 4   ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
             K+  ++TG + GIG    R L S G  V  T R E    E V  L+A G++       
Sbjct: 2   DMKRSILITGCSSGIGAYCARALQSDGWRVFATCRKE----EDVAALEAEGLEA-----F 52

Query: 64  QLDISDLASVSSLADFIKTQF-GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDW 122
           QLD ++  S+++L   +     G+LD L NN           A+   G       A  D 
Sbjct: 53  QLDYAEPESIAALVAQVLELSGGRLDALFNNG----------AYGQPG-------AVED- 94

Query: 123 SKVCYQTYELAVECLK----TNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
                    L  E L+     N++G       +IP++      R+V  SS
Sbjct: 95  ---------LPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSS 135

Length = 277

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 25/165 (15%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           ++  +VTG ++G+G    R  A +G  VV+     +   +A E L     D  + L  Q 
Sbjct: 5   EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE---DAAEALADELGDRAIAL--QA 59

Query: 66  DISDLASVSSLADFIKTQFGK-LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           D++D   V ++       FGK +  + NNA +A   FD DA         K   ++ W  
Sbjct: 60  DVTDREQVQAMFATATEHFGKPITTVVNNA-LADFSFDGDA--------RKKADDITWED 110

Query: 125 VCYQT-YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
             +Q   E +V+       G   T +A +P +      R++N+ +
Sbjct: 111 --FQQQLEGSVK-------GALNTIQAALPGMREQGFGRIINIGT 146

Length = 253

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 8/134 (5%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-GLEAVEKLKASGVDPEL 59
           M     K  VVTGS +GIG     +LA +G  VV+ A+       E ++ +K +G +   
Sbjct: 1   MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIG 60

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAE 119
           +L    D+S      +LA     ++G  DIL NNAG+         F +   ++      
Sbjct: 61  VL---ADVSTREGCETLAKATIDRYGVADILVNNAGLGL----FSPFLNVDDKLIDKHIS 113

Query: 120 VDWSKVCYQTYELA 133
            D+  V Y + ELA
Sbjct: 114 TDFKSVIYCSQELA 127

Length = 252

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 10/88 (11%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           +VTG+ +GIG    R L   G TV   A D    L             + L    LD++
Sbjct: 1  VIVTGAAQGIGRAVARHLLQAGATV--IALDLPFVLLLEY--------GDPLRLTPLDVA 50

Query: 69 DLASVSSLADFIKTQFGKLDILANNAGI 96
          D A+V  +   +  + G +D L N AG+
Sbjct: 51 DAAAVREVCSRLLAEHGPIDALVNCAGV 78

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 14/94 (14%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL--EAVEKLKASGVDPELLLFHQ 64
          K  VVTG+ +GIG     + A++G  VVL  R E   L  E   +L+A+G +   L    
Sbjct: 9  KVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE---LVHEVAAELRAAGGEALAL---- 61

Query: 65 LDISDL---ASVSSLADFIKTQFGKLDILANNAG 95
             +DL   A   +        FG++D+L NN G
Sbjct: 62 --TADLETYAGAQAAMAAAVEAFGRIDVLINNVG 93

Length = 260

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           ++TG + GIG        + G  V  TAR      E VE L A+G         QLD++
Sbjct: 4  VLITGCSSGIGRALADAFKAAGYEVWATARK----AEDVEALAAAGFTAV-----QLDVN 54

Query: 69 DLASVSSLADFIKTQFGKLDILANNAG 95
          D A+++ LA+ ++ + G LD+L NNAG
Sbjct: 55 DGAALARLAEELEAEHGGLDVLINNAG 81

Length = 274

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 51.1 bits (122), Expect = 2e-07
 Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE-AVEKLKASGVDPELLLFHQLDI 67
          AV+TG   GIG  T  + A +G  VVL   D K GL  AV  L+A G D   ++    D+
Sbjct: 9  AVITGGASGIGLATGTEFARRGARVVLGDVD-KPGLRQAVNHLRAEGFDVHGVM---CDV 64

Query: 68 SDLASVSSLADFIKTQFGKLDILANNAGI 96
               V+ LAD      G +D++ +NAGI
Sbjct: 65 RHREEVTHLADEAFRLLGHVDVVFSNAGI 93

Length = 275

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG+  GIG E     A+ G +VV++  +       V++++  G         + D
Sbjct: 12  KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFAC---RCD 68

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK-FDM 103
           I+    +S+LADF  ++ GK+DIL NNAG    K FDM
Sbjct: 69  ITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDM 106

Length = 255

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 9/98 (9%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR---DEKRGLEA-VEKLKASGVD 56
          M   + K A++TG  + IG    R L + G  V +       E   L A +  L+     
Sbjct: 1  MMTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSA- 59

Query: 57 PELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNA 94
                 Q D+ D  ++  L       FG+LD L NNA
Sbjct: 60 ----AALQADLLDPDALPELVAACVAAFGRLDALVNNA 93

Length = 249

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 8/94 (8%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFH 63
          K  ++ G  +N+ I +   + LA +G  +  T + E+  LE  VE+L A  +  +L+L  
Sbjct: 7  KRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGER--LEKRVEEL-AEELGSDLVL-- 61

Query: 64 QLDISDLASVSSLADFIKTQFGKLDILANNAGIA 97
            D+++  S+ +L   IK ++GKLD L ++   A
Sbjct: 62 PCDVTNDESIDALFATIKKKWGKLDGLVHSIAFA 95

Length = 259

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 12/94 (12%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTAR----DEKRGLEAVEKLKASGVDPELLLF 62
           K A+VTG N G+G      LA  G  +++T      DE R L  +EK            F
Sbjct: 16  KVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRL--IEKEGRKVT------F 67

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILANNAGI 96
            Q+D++   S   +      +FGK+DIL NNAG 
Sbjct: 68  VQVDLTKPESAEKVVKEALEEFGKIDILVNNAGT 101

Length = 258

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 218 PHSSAYKVSKAVINAYTRILAK--RYPKFCVNCVCPGFVKTDINFHAG 263
           P+  AY  SKA + A+TR+LAK        VN V PG V TD+ F+AG
Sbjct: 146 PNYGAYAGSKAAVEAFTRVLAKELGGRGITVNAVAPGPVDTDM-FYAG 192

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 50/220 (22%), Positives = 81/220 (36%), Gaps = 73/220 (33%)

Query: 54  GVD---PELLL--FHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFAD 108
           GVD   P + L  F Q D+ D AS+ +    +    G++D L N AG+            
Sbjct: 14  GVDRREPGMTLDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVP----------- 59

Query: 109 SGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
                  G A V+            V   + N+ G +   EAL+P +    +  +VN++S
Sbjct: 60  -------GTAPVE-----------LV--ARVNFLGLRHLTEALLPRMAPGGA--IVNVAS 97

Query: 169 YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC-----PHSSAY 223
              A  + P++                          ++EG      W        ++ Y
Sbjct: 98  LAGA--EWPQRLELHKALAAT--------------ASFDEG----AAWLAAHPVALATGY 137

Query: 224 KVSKAVINAYTRILAKRYPKFC-----VNCVCPGFVKTDI 258
           ++SK  +  +T  + +  P F      VNCV PG V T I
Sbjct: 138 QLSKEALILWT--MRQAQPWFGARGIRVNCVAPGPVFTPI 175

Length = 241

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 50.2 bits (120), Expect = 3e-07
 Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 7/104 (6%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           +K  ++TG+++GIG  T    A++G +V +  ARD     E  + ++A+G          
Sbjct: 2   RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGR---ACVVA 58

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGI---ASVKFDMDA 105
            D+++ A V ++ D +++ FG+LD L NNAGI   +    DMDA
Sbjct: 59  GDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDA 102

Length = 248

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 50.0 bits (119), Expect = 3e-07
 Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 19/137 (13%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFH 63
           +++ A VTG   GIG    ++L   G  VV     +  R ++ +E  KA G D    +  
Sbjct: 2   SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFD---FIAS 58

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIAS-------VKFDMDAFADSGY----- 111
           + ++ D  S  +  D +K + G++D+L NNAGI          + D  A  D+       
Sbjct: 59  EGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFN 118

Query: 112 ---QITKGDAEVDWSKV 125
              Q+  G  E  W ++
Sbjct: 119 VTKQVIDGMVERGWGRI 135

Length = 246

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 50.1 bits (120), Expect = 4e-07
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 4/103 (3%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M        V+TG++ GIG  T    A +G  +VL ARDE+      E+ +A G +   +
Sbjct: 2   MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAE---V 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASV-KFD 102
           L    D++D   V +LA    +  G++D+  NN G+ +V +F+
Sbjct: 59  LVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFE 101

Length = 330

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 49.5 bits (119), Expect = 4e-07
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 25/102 (24%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +AVVTG+  GIG     +LA +G  V+L +R +       EKL A  V  E+   + ++
Sbjct: 2  TWAVVTGATDGIGKAYAEELAKRGFNVILISRTQ-------EKLDA--VAKEIEEKYGVE 52

Query: 67 ISDLASVSSLADF---------IKTQFGKLDI--LANNAGIA 97
             +A     ADF         I+ +   LDI  L NN GI+
Sbjct: 53 TKTIA-----ADFSAGDDIYERIEKELEGLDIGILVNNVGIS 89

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 48.7 bits (116), Expect = 8e-07
 Identities = 57/253 (22%), Positives = 95/253 (37%), Gaps = 72/253 (28%)

Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFHQLDIS 68
           +VTG+++GIG     +LA+ G  + +     +   E+ V  ++A G +  LL F   D++
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQF---DVA 58

Query: 69  DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQ 128
           D  +  +L +    + G    +  NAGI           D+ +      +E DW  V   
Sbjct: 59  DRVACRTLLEADIAEHGAYYGVVLNAGITR---------DAAFPAL---SEEDWDIV--- 103

Query: 129 TYELAVECLKTN---YYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                   + TN   +Y     C   +P++      R++ L+S VS              
Sbjct: 104 --------IHTNLDGFYNVIHPC--TMPMIRARQGGRIITLAS-VS-------------- 138

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC 245
                                  G + NRG   +S+A         A    LAKR  K  
Sbjct: 139 -----------------------GVMGNRGQVNYSAAKAGLIGATKALAVELAKR--KIT 173

Query: 246 VNCVCPGFVKTDI 258
           VNC+ PG + T++
Sbjct: 174 VNCIAPGLIDTEM 186

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 48.6 bits (116), Expect = 9e-07
 Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 11 VTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL 70
          VTG+  G G    R+   +G  V+ T R ++R    +++LK    D   L   QLD+ + 
Sbjct: 5  VTGATAGFGECITRRFIQQGHKVIATGRRQER----LQELKDELGDN--LYIAQLDVRNR 58

Query: 71 ASVSSLADFIKTQFGKLDILANNAGIA 97
          A++  +   +  ++  +D+L NNAG+A
Sbjct: 59 AAIEEMLASLPAEWRNIDVLVNNAGLA 85

Length = 248

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.9 bits (117), Expect = 9e-07
 Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 16/103 (15%)

Query: 5   TKKYAVVTGSNK--GIGFETVRQLASKGITVVLT---ARDEK-----RGLEAV---EKLK 51
            KK A+VTG+++  GIG    R+LA+KGI +  T     D+         E V   E+++
Sbjct: 4   MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIE 63

Query: 52  ASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNA 94
           + GV  E +   ++D+S   + + +   +  + G   IL NNA
Sbjct: 64  SYGVRCEHM---EIDLSQPYAPNRVFYAVSERLGDPSILINNA 103

Length = 256

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 11/94 (11%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+ KGIG  TV+ LA  G  VV  +R +   L+++ + +  G++P       +D
Sbjct: 8   KRALVTGAGKGIGRATVKALAKAGARVVAVSRTQAD-LDSLVR-ECPGIEPV-----CVD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK 100
           +SD  +     +      G +D+L NNA +A ++
Sbjct: 61  LSDWDAT----EEALGSVGPVDLLVNNAAVAILQ 90

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 50/252 (19%), Positives = 89/252 (35%), Gaps = 78/252 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++T + +GIG       A +G  V+ T  +E    E +++L+             LD
Sbjct: 3   KVALITAAAQGIGRAIALAFAREGANVIATDINE----EKLKELERGPGITTR----VLD 54

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++D   V++LA     + G++D+L N AG       +D              + DW    
Sbjct: 55  VTDKEQVAALA----KEEGRIDVLFNCAGFVHHGSILDC------------EDDDWD--- 95

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     +  N        +A++P +       ++N+SS  S++K +P         
Sbjct: 96  --------FAMNLNVRSMYLMIKAVLPKMLARKDGSIINMSSVASSIKGVP--------- 138

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--F 244
                                     NR        Y  +KA +   T+ +A  + +   
Sbjct: 139 --------------------------NR------FVYSTTKAAVIGLTKSVAADFAQQGI 166

Query: 245 CVNCVCPGFVKT 256
             N +CPG V T
Sbjct: 167 RCNAICPGTVDT 178

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 4/90 (4%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL-EAVEKLKASGVDPELLLFHQLDI 67
          A VTG+  GIG      LA  G  V L       GL E  E ++A+G     +     D+
Sbjct: 11 AFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQI---AADV 67

Query: 68 SDLASVSSLADFIKTQFGKLDILANNAGIA 97
          +  A + +     + + G L +  N AGIA
Sbjct: 68 TSKADLRAAVARTEAELGALTLAVNAAGIA 97

Length = 254

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
          A+V G++ GIG  T  +LA+ G  V L AR  ++  E V+K++A G +    +   LD++
Sbjct: 13 ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEA---VAFPLDVT 69

Query: 69 DLASVSSLADFIKTQFGKLDILANNAG 95
          D  SV S     +   G++++L + AG
Sbjct: 70 DPDSVKSFVAQAEEALGEIEVLVSGAG 96

Length = 274

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 48.0 bits (114), Expect = 2e-06
 Identities = 61/259 (23%), Positives = 94/259 (36%), Gaps = 75/259 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD-PEL 59
           M + + + A+VTG++ GIG E  R L ++G  V L           VEKL+A   +  E 
Sbjct: 1   MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHG-------TRVEKLEALAAELGER 53

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAE 119
           +     ++SD   V +L    +     +DIL NNAGI             G  +   D  
Sbjct: 54  VKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITK----------DGLFVRMSDE- 102

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK 179
            DW  V           L+ N   T +    L   +      R++N++S V         
Sbjct: 103 -DWDSV-----------LEVNLTATFRLTRELTHPMMRRRYGRIINITSVV--------- 141

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
                                        G   N    P  + Y  SKA +  +++ LA+
Sbjct: 142 -----------------------------GVTGN----PGQANYCASKAGMIGFSKSLAQ 168

Query: 240 RYP--KFCVNCVCPGFVKT 256
                   VNCV PGF+++
Sbjct: 169 EIATRNVTVNCVAPGFIES 187

Length = 245

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
          A V G+  G+G    R+ A++G +V L AR E + LEA+                  D  
Sbjct: 2  AAVVGAGDGLGAAIARRFAAEGFSVALAARREAK-LEALLVDIIRDAGGSAKAV-PTDAR 59

Query: 69 DLASVSSLADFIKTQFGKLDILANNAG 95
          D   V +L D I+ + G L++L  NAG
Sbjct: 60 DEDEVIALFDLIEEEIGPLEVLVYNAG 86

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 13/98 (13%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA-SGVDPEL 59
          M   T K  +V G ++GIG   VR+  + G  V  T    K   +A E+L   +G     
Sbjct: 1  MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSK---DAAERLAQETGATAV- 56

Query: 60 LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIA 97
              Q D +D  +V  +      + G LDIL  NAGIA
Sbjct: 57 ----QTDSADRDAVIDVVR----KSGALDILVVNAGIA 86

Length = 237

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          K  ++TG  +++ I +   + L   G  +  T + E      VEKL     +  L+L   
Sbjct: 2  KRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKR-VEKLAERLGESALVL--P 58

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D+S+   +  L   +K  +GKLD L
Sbjct: 59 CDVSNDEEIKELFAEVKKDWGKLDGL 84

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 47.2 bits (112), Expect = 3e-06
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K AVVTG + G+G      LA  G  +V     E    E +E++ A G      L    D
Sbjct: 11 KVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPT--ETIEQVTALG---RRFLSLTAD 65

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGI 96
          +  +  + +L +    +FG +DIL NNAG+
Sbjct: 66 LRKIDGIPALLERAVAEFGHIDILVNNAGL 95

Length = 253

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 6/96 (6%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          M     + A++TG   GIG   V +  ++G  V +  R  ++    +  L+      + +
Sbjct: 1  MGWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEK----LASLRQR--FGDHV 54

Query: 61 LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGI 96
          L  + D++  A      D     FGKLD    NAGI
Sbjct: 55 LVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGI 90

Length = 263

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 47.0 bits (111), Expect = 4e-06
 Identities = 64/268 (23%), Positives = 109/268 (40%), Gaps = 79/268 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPEL 59
           M     K A+VTG+++GIG     +LA+ G  V +   R+++   E + +++++G    L
Sbjct: 1   MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFL 60

Query: 60  LLFHQLDISDLASVSSLADFIKTQF------GKLDILANNAGIASVKFDMDAFADSGYQI 113
           +   + D++ +  V  L + +K +        ++DIL NNAGI                 
Sbjct: 61  I---EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIG---------------- 101

Query: 114 TKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSAL 173
           T+G  E    ++     E+    +K  ++  +QT    +PLL      R++N+SS     
Sbjct: 102 TQGTIENTTEEI---FDEIMAVNIKAPFFLIQQT----LPLLRAEG--RVINISS----- 147

Query: 174 KDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAY 233
                 A   LG   ++                               AY +SK  +N  
Sbjct: 148 ------AEVRLGFTGSI-------------------------------AYGLSKGALNTM 170

Query: 234 TRILAKRYPK--FCVNCVCPGFVKTDIN 259
           T  LAK   +    VN + PG+ KTDIN
Sbjct: 171 TLPLAKHLGERGITVNTIMPGYTKTDIN 198

Length = 254

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 5e-06
 Identities = 59/264 (22%), Positives = 100/264 (37%), Gaps = 84/264 (31%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +Y ++TG+++G+G     QL  KG  V+  +R E + L  + +   S      L FH LD
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSN-----LTFHSLD 56

Query: 67  ISDLASVSS-LADFIKTQFGKLD---ILANNAGI-ASVKFDMDAFADSGYQITKGDAEVD 121
           + D+  + +   + + +          L NNAG+ A +K            I K ++E  
Sbjct: 57  LQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIK-----------PIEKAESE-- 103

Query: 122 WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR 181
              +      L    + T+ +  K T        +     R++N+SS             
Sbjct: 104 -ELITNVHLNLLAPMILTSTF-MKHT-------KDWKVDKRVINISS------------- 141

Query: 182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA--- 238
              G  +N            YF           GW    SAY  SKA ++ +T+ +A   
Sbjct: 142 ---GAAKNP-----------YF-----------GW----SAYCSSKAGLDMFTQTVATEQ 172

Query: 239 --KRYPKFCVNCVC--PGFVKTDI 258
             + YP   V  V   PG + T++
Sbjct: 173 EEEEYP---VKIVAFSPGVMDTNM 193

Length = 251

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.3 bits (110), Expect = 8e-06
 Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
          K AVVTG+  G+G      LA  G TVV+           V ++++A+G           
Sbjct: 13 KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAV---AVAG 69

Query: 66 DISDLASVSSLADFIKTQFGKLDILANNAGI 96
          DIS  A+   L        G LDI+ NNAGI
Sbjct: 70 DISQRATADELVA-TAVGLGGLDIVVNNAGI 99

Length = 306

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 45.7 bits (109), Expect = 9e-06
 Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 16 KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSS 75
            I +   +  A +G  VVLT       + AV++L      P  ++   LD++    +  
Sbjct: 6  NSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAK--ELPADVIP--LDVTSDEDIDE 61

Query: 76 LADFIKTQFGKLDILANNAGIA 97
          L + +K   GK+D L ++  ++
Sbjct: 62 LFEKVKEDGGKIDFLVHSIAMS 83

Length = 239

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 45.9 bits (109), Expect = 9e-06
 Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 24/170 (14%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           A +TG+  G+G    R++A +G  V LT  ++  GL+A      +     +      D++
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 69  DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQ 128
           D A   +L        G L +L NNAG+ S          +  QI       +W +V   
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGVGS--------FGAIEQIELD----EWRRV--- 106

Query: 129 TYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
              + VE +   + G    C+  +P L  S    +VN+SS V+A K  P+
Sbjct: 107 -MAINVESI---FLG----CKHALPYLRASQPASIVNISS-VAAFKAEPD 147

Length = 251

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 37/164 (22%)

Query: 11  VTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL 70
           +TG++ G G     +L ++G  V  T R      +A++ LKA     + L   QLD++D 
Sbjct: 7   ITGASSGFGRGMTERLLARGDRVAATVRR----PDALDDLKAR--YGDRLWVLQLDVTDS 60

Query: 71  ASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTY 130
           A+V ++ D      G++D++ +NAG                    G AE           
Sbjct: 61  AAVRAVVDRAFAALGRIDVVVSNAGYG----------------LFGAAE----------- 93

Query: 131 ELAVECLK----TNYYGTKQTCEALIPLLELSDSPRLVNLSSYV 170
           EL+   ++    TN  G+ Q   A +P L      R+V +SS  
Sbjct: 94  ELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEG 137

Length = 276

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 10 VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
          ++TG+ + IG      L ++G  V+++ R     ++ + +  A           Q D S 
Sbjct: 6  LITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQC--------IQADFST 57

Query: 70 LASVSSLADFIKTQFGKLDILANNA 94
           A + +  D +K     L  + +NA
Sbjct: 58 NAGIMAFIDELKQHTDGLRAIIHNA 82

Length = 236

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 5/93 (5%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          TK+ A+VTG+  GIG    R+  + G  V+    D        + L  +   P       
Sbjct: 1  TKRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPV-----A 55

Query: 65 LDISDLASVSSLADFIKTQFGKLDILANNAGIA 97
           D++D AS+++       + G +D+L  NAG A
Sbjct: 56 CDLTDAASLAAALANAAAERGPVDVLVANAGAA 88

Length = 257

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 16/93 (17%)

Query: 10  VVTGSNKGIGFETVRQLASKGIT-VVLTAR--DEKRGLEAVEKLKASGVDPELLLFHQLD 66
           ++TG   G+G    R LA++G   +VL +R     R       L+A G    ++   + D
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVV---RCD 210

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASV 99
           ++D A++++L          L  LA    +A V
Sbjct: 211 VTDPAALAAL----------LAELAAGGPLAGV 233

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 45.3 bits (107), Expect = 1e-05
 Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 5/94 (5%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV--EKLKASGVDPELLLF 62
          + K  +VTG+++G+G +  +  A+ G TV+L AR +K+ LE V    ++A   +P  + F
Sbjct: 5  SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKK-LEKVYDAIVEAGHPEPFAIRF 63

Query: 63 HQLDISDLASVSSLADFIKTQF-GKLDILANNAG 95
            +   +       A  I     GKLD + + AG
Sbjct: 64 DLMSAEE-KEFEQFAATIAEATQGKLDGIVHCAG 96

Length = 239

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 52/257 (20%), Positives = 91/257 (35%), Gaps = 83/257 (32%)

Query: 4   ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
            + +  +VTG+ KGIG     +LA+ G  V+  AR             A    P  L   
Sbjct: 1   MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIAR------------SAIDDFPGELF-- 46

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWS 123
             D++D+   ++    I      +D + NN GIA            G        ++D +
Sbjct: 47  ACDLADIEQTAATLAQINEIHP-VDAIVNNVGIAL-------PQPLG--------KIDLA 90

Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV 183
            +    Y+L V           Q  +A +  ++L +  R+VN+ S            RA+
Sbjct: 91  AL-QDVYDLNVRA-------AVQVTQAFLEGMKLREQGRIVNICS------------RAI 130

Query: 184 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK 243
            G       +R                          ++Y  +K+ +   TR  A    +
Sbjct: 131 FG-----ALDR--------------------------TSYSAAKSALVGCTRTWALELAE 159

Query: 244 F--CVNCVCPGFVKTDI 258
           +   VN V PG ++T++
Sbjct: 160 YGITVNAVAPGPIETEL 176

Length = 234

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 50/201 (24%)

Query: 10  VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
            +TG++ GIG    R+ A +G T+ L AR   R  +A++   A       +  +  D+ D
Sbjct: 6   FITGASSGIGQALAREYARQGATLGLVAR---RT-DALQAFAARLPKAARVSVYAADVRD 61

Query: 70  LASVSSLA-DFIKTQFGKLDILANNAGI-----ASVKFDMDAFADSGYQITKGDAEVDWS 123
             ++++ A DFI    G  D++  NAGI        + D+  F                 
Sbjct: 62  ADALAAAAADFIA-AHGLPDVVIANAGISVGTLTEEREDLAVFR---------------- 104

Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP------ 177
                      E + TNY+G   T +  I  +  +    LV ++S V+ ++ LP      
Sbjct: 105 -----------EVMDTNYFGMVATFQPFIAPMRAARRGTLVGIAS-VAGVRGLPGAGAYS 152

Query: 178 -EKARAVLGDVENLTEERIEM 197
             KA A +  +E+L   R+E+
Sbjct: 153 ASKA-AAIKYLESL---RVEL 169

Length = 257

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 62/254 (24%), Positives = 92/254 (36%), Gaps = 69/254 (27%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             K A+VT S  GIG    R+LA  G  VV+++R ++    AV  L+  G+     + H 
Sbjct: 9   ANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVCHV 68

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
               D   + + A       G +DIL +NA +       + F  +    T+   EV W K
Sbjct: 69  GKAEDRERLVATA---VNLHGGVDILVSNAAV-------NPFFGNILDSTE---EV-WDK 114

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           +           L  N   T    +A++P +E      +V +SS V+A    P       
Sbjct: 115 I-----------LDVNVKATALMTKAVVPEMEKRGGGSVVIVSS-VAAFHPFP------- 155

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK- 243
                                         G  P    Y VSK  +   T+ LA      
Sbjct: 156 ------------------------------GLGP----YNVSKTALLGLTKNLAPELAPR 181

Query: 244 -FCVNCVCPGFVKT 256
              VNC+ PG +KT
Sbjct: 182 NIRVNCLAPGLIKT 195

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 16/109 (14%)

Query: 4   ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
             +  A++TG+++GIG    R+LA    T++L  R  +R  E   +L   G  P      
Sbjct: 1   MERPTALITGASRGIGAAIARELAPTH-TLLLGGRPAERLDELAAEL--PGATP-----F 52

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQ 112
            +D++D  ++++  +    Q G+LD+L +NAG+A    D+   A+S   
Sbjct: 53  PVDLTDPEAIAAAVE----QLGRLDVLVHNAGVA----DLGPVAESTVD 93

Length = 227

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 60/281 (21%), Positives = 99/281 (35%), Gaps = 76/281 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           K A++TG + GIG       A +G  + +   DE       ++  +  GV   L+     
Sbjct: 47  KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLI---PG 103

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D+SD A      +    + G+LDIL NNA                +Q  +   E      
Sbjct: 104 DVSDEAFCKDAVEETVRELGRLDILVNNA---------------AFQYPQQSLE------ 142

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
              T E   +  KTN Y      +A +P L+   +  ++N  S ++  +         L 
Sbjct: 143 -DITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSA--IINTGS-ITGYEGNET-----LI 193

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK-- 243
           D                                    Y  +K  I+A+TR LA+   +  
Sbjct: 194 D------------------------------------YSATKGAIHAFTRSLAQSLVQKG 217

Query: 244 FCVNCVCPGFVKTDIN---FHAGILSVEEGAESPVKLALLP 281
             VN V PG + T +    F    +S + G+ +P++    P
Sbjct: 218 IRVNAVAPGPIWTPLIPSDFDEEKVS-QFGSNTPMQRPGQP 257

Length = 290

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 44.0 bits (105), Expect = 2e-05
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 7/83 (8%)

Query: 10 VVTGSNKGIGFETVRQLASKGI-TVVLTARDEK---RGLEAVEKLKASGVDPELLLFHQL 65
          +VTG   G+G E  R LA +G   +VL +R           + +L+A G +   +     
Sbjct: 4  LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAE---VTVVAC 60

Query: 66 DISDLASVSSLADFIKTQFGKLD 88
          D+SD  +V +L   I+     L 
Sbjct: 61 DVSDRDAVRALLAEIRADGPPLR 83

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 55/244 (22%), Positives = 88/244 (36%), Gaps = 47/244 (19%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K   ++TG++ G+G    + LA+ G   V++  RD  +  +A + L   G+  +      
Sbjct: 3   KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSL---GMPKDSYTIMH 59

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           LD+  L SV       +     LD L  NA +         F   G++++ G        
Sbjct: 60  LDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVG-------- 111

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--SPRLVNLSSYVSALKDLPEKA-- 180
                         TN+ G    C  L+  L+ S     RL+ + S       L      
Sbjct: 112 --------------TNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPP 157

Query: 181 RAVLGDVENLT---EERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
           +A LGD+  L    +  I M+    FK               + AYK SK       R L
Sbjct: 158 KANLGDLSGLAAGFKAPIAMIDGKEFKG--------------AKAYKDSKVCNMLTVREL 203

Query: 238 AKRY 241
            +R+
Sbjct: 204 HRRF 207

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 45/174 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTAR----DEKRGLE-----AVEKLKASGVDP 57
           K   +TG+++GIG     + A  G  +V+ A+      K  L      A E+++A+G   
Sbjct: 7   KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPK--LPGTIHTAAEEIEAAGGQA 64

Query: 58  ELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASV----KFDMDAFADSGYQI 113
              L    D+ D   V++       +FG +DI  NNA   ++       M  F D   QI
Sbjct: 65  ---LPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRF-DLMQQI 120

Query: 114 TKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS 167
                                     N  GT    +A +P L+ S++P ++ LS
Sbjct: 121 --------------------------NVRGTFLVSQACLPHLKKSENPHILTLS 148

Length = 273

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 44.7 bits (105), Expect = 2e-05
 Identities = 65/266 (24%), Positives = 105/266 (39%), Gaps = 87/266 (32%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASG-----VDPELL 60
           K A+VTG+++GIG    ++LA+ G  V +   + K    E V +++++G     +   L 
Sbjct: 5   KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLE 64

Query: 61  LFHQLDISDLASVSSLADFIKTQFG--KLDILANNAGI---ASVKFDMDAFADSGYQITK 115
             H ++    A  SSL + ++ + G  K DIL NNAGI   A ++   + F D    +  
Sbjct: 65  SLHGVE----ALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVN- 119

Query: 116 GDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD 175
                  +K  +   + A                    L  L D+ R++N+SS  +    
Sbjct: 120 -------AKAPFFIIQQA--------------------LSRLRDNSRIINISSAAT---- 148

Query: 176 LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTR 235
                             RI +                    P   AY ++K  IN  T 
Sbjct: 149 ------------------RISL--------------------PDFIAYSMTKGAINTMTF 170

Query: 236 ILAKRYPK--FCVNCVCPGFVKTDIN 259
            LAK+       VN + PGF+KTD+N
Sbjct: 171 TLAKQLGARGITVNAILPGFIKTDMN 196

Length = 252

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
          K  ++TG+   IG   V+ +   G  V+    D++   E +E L K      + L   +L
Sbjct: 5  KTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKS--KKLSLVEL 62

Query: 66 DISDLASVSSLADFIKTQFGKLDILANNA 94
          DI+D  S+         ++GK+D   N A
Sbjct: 63 DITDQESLEEFLSKSAEKYGKIDGAVNCA 91

Length = 256

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 12/115 (10%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVL---TARDEKRGLEAVEKLKASGVDP 57
           M+ A  + A+VTG+ + IG      LA+ G  V +    +RDE        +++A G   
Sbjct: 4   MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAE--ALAAEIRALGRRA 61

Query: 58  ELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQ 112
             L   Q D++D A V +L        G + +L NNA +    F+ D+ A     
Sbjct: 62  VAL---QADLADEAEVRALVARASAALGPITLLVNNASL----FEYDSAASFTRA 109

Length = 258

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 54/254 (21%), Positives = 91/254 (35%), Gaps = 73/254 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR--GLEAVEKLKASGVDPELLLFHQ 64
           K A++TG + GIG       A +G  V +    E+     E  + ++  G    LL+   
Sbjct: 27  KKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRK-CLLIPG- 84

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            D+ D +    L   +  +FGKLDIL NNA     +  ++              +++   
Sbjct: 85  -DLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDI---------TTEQLE--- 131

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
              +T+       +TN +      +A +P L+   S  ++N +S                
Sbjct: 132 ---KTF-------RTNIFSMFYLTKAALPHLKKGSS--IINTTSVT-------------- 165

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK- 243
                                      A +G  PH   Y  +K  I A+TR L+ +  + 
Sbjct: 166 ---------------------------AYKG-SPHLLDYAATKGAIVAFTRGLSLQLAEK 197

Query: 244 -FCVNCVCPGFVKT 256
              VN V PG + T
Sbjct: 198 GIRVNAVAPGPIWT 211

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 43.2 bits (103), Expect = 3e-05
 Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 10 VVTGSNKGIGFETVRQLASKGI-TVVLTAR---DEKRGLEAVEKLKASGVDPELLLFHQL 65
          ++TG   G+G    R LA +G   +VL +R   D       + +L+A+G    +      
Sbjct: 4  LITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTV---VAC 60

Query: 66 DISDLASVSSLADFIKTQFGKLDILANNAGI 96
          D++D  +++++   I    G L  + + AG+
Sbjct: 61 DVADRDALAAVLAAIPAVEGPLTGVIHAAGV 91

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 4e-05
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 12/97 (12%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVL---------TARDEKRGLEAVEKLKASGVDPEL 59
            +VTG+  GIG       A++G  VV+         +A         V+++ A+G +   
Sbjct: 9   VIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEA-- 66

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGI 96
            + +  DI+D    ++L D     FG LD+L NNAGI
Sbjct: 67  -VANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGI 102

Length = 286

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 4e-05
 Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 1/93 (1%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            + AVV G  + +G      LA +G  V +   + ++     +++ A   +     F  
Sbjct: 1  MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGF-G 59

Query: 65 LDISDLASVSSLADFIKTQFGKLDILANNAGIA 97
           D +   SV +L+  +   FG++D+L  NAGIA
Sbjct: 60 ADATSEQSVLALSRGVDEIFGRVDLLVYNAGIA 92

Length = 259

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 43.6 bits (103), Expect = 5e-05
 Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 10/89 (11%)

Query: 10 VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
          +VT S++GIGF   R+L  KG  VV+++R+E+   +A+++LK  G   E+        +D
Sbjct: 4  LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG---EVYAVK----AD 56

Query: 70 LASVSSLADFIKTQF---GKLDILANNAG 95
          L+    L + +K  +   G +D L  NAG
Sbjct: 57 LSDKDDLKNLVKEAWELLGGIDALVWNAG 85

Length = 259

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 42.7 bits (100), Expect = 5e-05
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 3/93 (3%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG   GIG  T   LA +G  V++T  D++ G   VE++   G +    LF   D
Sbjct: 17  KVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEA---LFVSYD 73

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASV 99
           +        +       F ++D+L  NAG+  +
Sbjct: 74  MEKQGDWQRVISITLNAFSRIDMLFQNAGLYKI 106

Length = 169

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 43.6 bits (103), Expect = 5e-05
 Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 31/174 (17%)

Query: 7   KYAVVTGSNKGIGFETVRQLA---SKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
              ++TG + GIG     +LA   SK   V  T RD K+     E   A  +    L   
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWE--AAGALAGGTLETL 58

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWS 123
           QLD+ D  SV++  + +      +D+L  NAG+  +                G  E    
Sbjct: 59  QLDVCDSKSVAAAVERVTE--RHVDVLVCNAGVGLL----------------GPLEA--- 97

Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
                + +        N +GT +  +A +P ++   S R++  SS V  L+ LP
Sbjct: 98  ----LSEDAMASVFDVNVFGTVRMLQAFLPDMKRRGSGRILVTSS-VGGLQGLP 146

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 43.5 bits (103), Expect = 6e-05
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 4/108 (3%)

Query: 10  VVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           ++TG++ G+G  T + LA  G   VV+  RD    L+A    K++G+  +      LD++
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDF---LKAERAAKSAGMPKDSYTVMHLDLA 57

Query: 69  DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKG 116
            L SV    D  +     LD+L  NA +         F   G++++ G
Sbjct: 58  SLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVG 105

Length = 308

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 43.2 bits (102), Expect = 7e-05
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 7/93 (7%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVL----TARDEKRGLEAVEKLKASGVDPELLLF 62
          K  ++ G  K +G    R LA++G   V     +A  +    E V  +KA+G        
Sbjct: 9  KVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAF-- 66

Query: 63 HQLDISDLASVSSLADFIKTQFGKLDILANNAG 95
           Q D++  A+V  L D  K  FG+ DI  N  G
Sbjct: 67 -QADLTTAAAVEKLFDDAKAAFGRPDIAINTVG 98

Length = 257

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 43.0 bits (101), Expect = 7e-05
 Identities = 60/273 (21%), Positives = 99/273 (36%), Gaps = 75/273 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG   GIG  T R+ A +G  V +   + +   +    ++A G + +       D
Sbjct: 4   KTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAF---ACD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           I+D  SV +     +   G +D+L NNAG        D F       TK +    W ++ 
Sbjct: 61  ITDRDSVDTAVAAAEQALGPVDVLVNNAG-------WDKFGP----FTKTE-PPLWERL- 107

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     +  N  G      A++P +    + R+VN++S                  
Sbjct: 108 ----------IAINLTGALHMHHAVLPGMVERGAGRIVNIASD----------------- 140

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--F 244
                                    A R      + Y   K  + A+++ +A+ + +   
Sbjct: 141 -------------------------AARVGSSGEAVYAACKGGLVAFSKTMAREHARHGI 175

Query: 245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKL 277
            VN VCPG   T     A +  +  GAE+P KL
Sbjct: 176 TVNVVCPGPTDT-----ALLDDICGGAENPEKL 203

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 42.6 bits (100), Expect = 1e-04
 Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 9/94 (9%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            K A++TG N G+G      LA  G  +V     E    E   +++A G       FH 
Sbjct: 7  NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAP--ETQAQVEALGRK-----FHF 59

Query: 65 L--DISDLASVSSLADFIKTQFGKLDILANNAGI 96
          +  D+     + S+        G +DIL NNAGI
Sbjct: 60 ITADLIQQKDIDSIVSQAVEVMGHIDILINNAGI 93

Length = 251

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 14/94 (14%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR--GLEAVEKLKASGVDPELLLFH 63
          K+ A++ G+++G+G   V +L  +G  V  T R  ++   L+A+      GV  E     
Sbjct: 1  KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALP-----GVHIE----- 50

Query: 64 QLDISDLASVSSLADFIKTQFGKLDILANNAGIA 97
          +LD++D AS+  L   ++ Q  + D+L  NAGI+
Sbjct: 51 KLDMNDPASLDQLLQRLQGQ--RFDLLFVNAGIS 82

Length = 225

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 44/166 (26%), Positives = 65/166 (39%), Gaps = 37/166 (22%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           +K  ++TG + GIG E   +L  +G  V+   R      + V ++ + G    L     L
Sbjct: 2   QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKP----DDVARMNSLGFTGIL-----L 52

Query: 66  DISDLASVSSLAD-FIKTQFGKLDILANNAGIASVKFDMDAFADSG--YQITKGDAEVDW 122
           D+ D  SV   AD  I     +L  L NNAG          F   G    I++   E  +
Sbjct: 53  DLDDPESVERAADEVIALTDNRLYGLFNNAG----------FGVYGPLSTISRQQMEQQF 102

Query: 123 SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
           S               TN++GT Q    L+P +      R+V  SS
Sbjct: 103 S---------------TNFFGTHQLTMLLLPAMLPHGEGRIVMTSS 133

Length = 256

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 10/90 (11%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKR--GLEAVEKLKASGVDPELLLFHQLD 66
          A++TG   G+G   V +  ++G  V +  R  ++   L A       GV        + D
Sbjct: 7  ALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGV--------EGD 58

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGI 96
          +  LA           +FGKLD    NAGI
Sbjct: 59 VRSLADNERAVARCVERFGKLDCFIGNAGI 88

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 51/190 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL----------------TARDEKRGLEAVEKL 50
           K A +TG+ +G G     +LA++G  ++                 T  D       VE L
Sbjct: 4   KVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEAL 63

Query: 51  KASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASV--KFDMDAFAD 108
                    +L  + D+ DLA V ++ +    QFG+LD++  NAG+ S    +++     
Sbjct: 64  GRK------VLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELS---- 113

Query: 109 SGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLS 167
                     E  W  V           L  N  G  +TC+A++P ++E  +   ++  S
Sbjct: 114 ----------EEQWDTV-----------LDINLTGVWRTCKAVVPHMIERGNGGSIIITS 152

Query: 168 SYVSALKDLP 177
           S V+ LK LP
Sbjct: 153 S-VAGLKALP 161

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 12/92 (13%)

Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
          A+VTG ++G+G     QL   GI V+  AR     L A     A+G     L   +LD+S
Sbjct: 4  AIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAA-----AAGER---LAEVELDLS 55

Query: 69 DLASV-SSLADFIKTQFG---KLDILANNAGI 96
          D A+  + LA  +   F       +L NNAG 
Sbjct: 56 DAAAAAAWLAGDLLAAFVDGASRVLLINNAGT 87

Length = 243

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 39/149 (26%), Positives = 57/149 (38%), Gaps = 27/149 (18%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLT--ARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           A++TG++ GIG  T    A +G  + L     +E+   E V+ ++A G     L     D
Sbjct: 58  ALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVAL---PGD 114

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           + D A    L +    + G LDIL N AG  +   D+       +  T            
Sbjct: 115 LKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDAT------------ 162

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLL 155
                      KTN Y     C+A IP L
Sbjct: 163 ----------FKTNVYAMFWLCKAAIPHL 181

Length = 300

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 37/185 (20%)

Query: 1   MAEATKKYAVVTG--SNKGIGFETVRQLASKGITVVLT------ARDEKRGLEAVEKLKA 52
           M + T K A+VTG  +N+ I +   +QL + G  + +T       R EK+  E  E L  
Sbjct: 1   MLDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNP 60

Query: 53  SGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQ 112
           S       LF   D+ D A +    + IK ++GKLDIL +            AFA     
Sbjct: 61  S-------LFLPCDVQDDAQIEETFETIKQKWGKLDILVHCL----------AFAG---- 99

Query: 113 ITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA 172
             K +   D+S    + +  A+E    + Y     C+A  PL  +S+   +V L +Y+  
Sbjct: 100 --KEELIGDFSATSREGFARALE---ISAYSLAPLCKAAKPL--MSEGGSIVTL-TYLGG 151

Query: 173 LKDLP 177
           ++ +P
Sbjct: 152 VRAIP 156

Length = 258

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 41.6 bits (97), Expect = 2e-04
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG++ GIG          G  V + AR      +  +++  SG     ++    D
Sbjct: 10  KRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGK---VVPVCCD 66

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMD 104
           +S    V+S+ D +  + G +DI   NAGI +V   +D
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLD 104

Length = 253

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 40.7 bits (95), Expect = 5e-04
 Identities = 40/182 (21%), Positives = 68/182 (37%), Gaps = 36/182 (19%)

Query: 8   YAVVTGSNKGIGFETVRQLA----SKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
             +VTG+++G G    ++LA    S G  +VL+AR+     EA+ +LKA        L  
Sbjct: 2   VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARN----DEALRQLKAEIGAERSGLRV 57

Query: 64  QLDISDLASVSSLADFIKT--------QFGKLDILANNAGIASVKFDMDAFADSGYQITK 115
                DL + + L   +K            +L +L NNAG             +   ++K
Sbjct: 58  VRVSLDLGAEAGLEQLLKALRELPRPKGLQRL-LLINNAG-------------TLGDVSK 103

Query: 116 GDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD 175
           G  ++  S      + L +    T+      T   L    +     R V   S + A++ 
Sbjct: 104 GFVDLSDSTQVQNYWALNL----TSMLCL--TSSVLKAFKDSPGLNRTVVNISSLCAIQP 157

Query: 176 LP 177
             
Sbjct: 158 FK 159

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 40.7 bits (95), Expect = 5e-04
 Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 18/106 (16%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH--- 63
           K A++TGS +GIG    +    +G  V +          A   L+A+      +      
Sbjct: 4   KTALITGSARGIGRAFAQAYVREGARVAI----------ADINLEAARATAAEIGPAACA 53

Query: 64  -QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFAD 108
             LD++D AS+      +  ++G +DIL NNA +    FD+    D
Sbjct: 54  ISLDVTDQASIDRCVAALVDRWGSIDILVNNAAL----FDLAPIVD 95

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.2 bits (94), Expect = 6e-04
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 16/107 (14%)

Query: 1   MAEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLT-----------ARDEKRGLEAV 47
           M +   K AVVTG +   GIG    ++LA  G  +  T             D+   ++  
Sbjct: 1   MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQ 60

Query: 48  EKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNA 94
           E+L  +GV    +   +LD++   +   L + +  Q G   IL NNA
Sbjct: 61  EELLKNGVKVSSM---ELDLTQNDAPKELLNKVTEQLGYPHILVNNA 104

Length = 256

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 40.0 bits (94), Expect = 8e-04
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 6/57 (10%)

Query: 209 GEIANRGWCP-HSSAYKVSKAVINAYTRILAKRY-PKFC-VNCVCPGFVKTDINFHA 262
           G I NR   P   +AY  SKA +    + LA  +   F  VN + PG++ TD+    
Sbjct: 148 GTIVNR---PQPQAAYNASKAAVIHLAKSLAVEWAKYFIRVNSISPGYIDTDLTDFV 201

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 22/97 (22%)

Query: 185 GDVENLTEERIEMVVK--------------DYFKDYEEGEIAN----RGWC--PHSSAYK 224
           G V ++T+E  + V+                Y    + G I N     G         Y 
Sbjct: 97  GLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYS 156

Query: 225 VSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDIN 259
            SK  +NA+T+ LAK        VN V PG + T++ 
Sbjct: 157 ASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMW 193

Length = 247

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 218 PHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDINFH 261
           P    Y +SKA +   TR +A  + +    VN +CPG++ T+IN H
Sbjct: 161 PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHH 206

Length = 258

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 43/163 (26%), Positives = 62/163 (38%), Gaps = 30/163 (18%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-LKASGVDPELLLFHQL 65
           K  ++ G+   I     R+ A+ G  + L ARD +R LE +   L+A G     +  H+L
Sbjct: 2   KKILIIGATSDIARACARRYAAAGARLYLAARDVER-LERLADDLRARGA--VAVSTHEL 58

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           DI D A   S A F+ +     DI+    G                  T GD        
Sbjct: 59  DILDTA---SHAAFLDSLPALPDIVLIAVG------------------TLGD-----QAA 92

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
           C     LA+   +TN+ G       L    E   S  +V +SS
Sbjct: 93  CEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISS 135

Length = 243

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 19/100 (19%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG-------------LEAVEKLKAS 53
           K A+V G+ +G G     +L + G TV +T R  +                E V      
Sbjct: 9   KVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGR 68

Query: 54  GVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANN 93
           G+        Q+D      V +L + I  + G+LDIL N+
Sbjct: 69  GIAV------QVDHLVPEQVRALVERIDREQGRLDILVND 102

Length = 305

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 6/92 (6%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K+  VV G+  GIG    R++ + G  V+L   +E+    A + L+ +G D       +
Sbjct: 1  MKEVVVVIGAG-GIGQAIARRVGA-GKKVLLADYNEENLEAAAKTLREAGFDVSTQ---E 55

Query: 65 LDISDLASVSSLADFIKTQFGKLDILANNAGI 96
          +D+S   SV +LA   +T  G +  L + AG+
Sbjct: 56 VDVSSRESVKALAATAQT-LGPVTGLVHTAGV 86

Length = 275

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA-SGVD 56
          K A  T S+KGIGF   R LA  G  V+L +R+E+   +A EK+K+ S VD
Sbjct: 9  KLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVD 59

Length = 263

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K  VV G   GI     +  A  G  V + +R +++   AV +L+ +G  PE L     D
Sbjct: 10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAG--PEGLGV-SAD 66

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNA 94
          + D A+V +    I  +FG +D+L + A
Sbjct: 67 VRDYAAVEAAFAQIADEFGPIDVLVSGA 94

Length = 264

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 21/102 (20%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVL---------TARDEKRGLEAVEKLKASGVDP 57
          +  +VTG+  G+G       A +G  VV+         + +      + V+++KA+G   
Sbjct: 6  RVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGKA 65

Query: 58 ELLLFHQLDISDLASVSSLADFIKT---QFGKLDILANNAGI 96
                   +++  SV      +KT    FG++DIL NNAGI
Sbjct: 66 ---------VANYDSVEDGEKIVKTAIDAFGRVDILVNNAGI 98

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 218 PHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAGILSVEE 269
                YK SKA +N+ TR        P   V  + PG+VKTD+      L VE 
Sbjct: 142 GEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDNAPLDVET 195

Length = 225

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 37.8 bits (88), Expect = 0.004
 Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 33/164 (20%)

Query: 11  VTGSNKGIGFETVRQLASKGITVVLTAR--DEKRGL-----EAVEKLKASGVDPELLLFH 63
           +TG+++GIG     + A  G  VV+ A+  +    L      A E+++A+G      +  
Sbjct: 8   ITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGKALPCI-- 65

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWS 123
            +DI D   V +  +    +FG +DIL NNA              S   +T G  +    
Sbjct: 66  -VDIRDEDQVRAAVEKAVEKFGGIDILVNNA--------------SAISLT-GTLDTPMK 109

Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS 167
           +     Y+L    +  N  GT    +A +P L+ S +P ++NLS
Sbjct: 110 R-----YDLM---MGVNTRGTYLCSKACLPYLKKSKNPHILNLS 145

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	298
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK09186	256	flagellin modification protein A; Provisional	99.98
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.98
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.98
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.98
PRK06138	252	short chain dehydrogenase; Provisional	99.98
PRK12742	237	oxidoreductase; Provisional	99.98
PRK05650	270	short chain dehydrogenase; Provisional	99.98
PRK08628	258	short chain dehydrogenase; Provisional	99.98
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.98
PRK06500	249	short chain dehydrogenase; Provisional	99.97
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.97
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07890	258	short chain dehydrogenase; Provisional	99.97
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.97
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.97
PRK06949	258	short chain dehydrogenase; Provisional	99.97
PRK06484	520	short chain dehydrogenase; Validated	99.97
PRK06701	290	short chain dehydrogenase; Provisional	99.97
PRK05884	223	short chain dehydrogenase; Provisional	99.97
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.97
PRK07832	272	short chain dehydrogenase; Provisional	99.97
PRK06057	255	short chain dehydrogenase; Provisional	99.97
PRK06180	277	short chain dehydrogenase; Provisional	99.97
PRK06182	273	short chain dehydrogenase; Validated	99.97
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.97
PRK12937	245	short chain dehydrogenase; Provisional	99.97
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.97
PRK08263	275	short chain dehydrogenase; Provisional	99.97
PRK09072	263	short chain dehydrogenase; Provisional	99.97
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.97
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.97
PRK06198	260	short chain dehydrogenase; Provisional	99.97
PRK08251	248	short chain dehydrogenase; Provisional	99.97
PRK06179	270	short chain dehydrogenase; Provisional	99.97
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.97
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.97
PRK12744	257	short chain dehydrogenase; Provisional	99.97
PRK09134	258	short chain dehydrogenase; Provisional	99.97
PRK07069	251	short chain dehydrogenase; Validated	99.97
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.97
PRK08267	260	short chain dehydrogenase; Provisional	99.97
PRK05875	276	short chain dehydrogenase; Provisional	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
PRK06123	248	short chain dehydrogenase; Provisional	99.97
PRK12827	249	short chain dehydrogenase; Provisional	99.97
PRK06914	280	short chain dehydrogenase; Provisional	99.97
PRK12746	254	short chain dehydrogenase; Provisional	99.97
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK10538	248	malonic semialdehyde reductase; Provisional	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
PRK07102	243	short chain dehydrogenase; Provisional	99.97
PRK05693	274	short chain dehydrogenase; Provisional	99.97
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.97
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.97
PRK07775	274	short chain dehydrogenase; Provisional	99.97
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.97
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.97
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.97
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.96
PRK06482	276	short chain dehydrogenase; Provisional	99.96
PRK06924	251	short chain dehydrogenase; Provisional	99.96
PRK07074	257	short chain dehydrogenase; Provisional	99.96
PRK12828	239	short chain dehydrogenase; Provisional	99.96
COG1028	251	FabG Dehydrogenases with different specificities (	99.96
PRK06181	263	short chain dehydrogenase; Provisional	99.96
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK06101	240	short chain dehydrogenase; Provisional	99.96
PRK09135	249	pteridine reductase; Provisional	99.96
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.96
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.96
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.96
PRK07577	234	short chain dehydrogenase; Provisional	99.96
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK07806	248	short chain dehydrogenase; Provisional	99.96
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.96
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK12829	264	short chain dehydrogenase; Provisional	99.96
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK07060	245	short chain dehydrogenase; Provisional	99.96
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK07578	199	short chain dehydrogenase; Provisional	99.96
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.96
PRK07023	243	short chain dehydrogenase; Provisional	99.95
PRK08264	238	short chain dehydrogenase; Validated	99.95
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK09291	257	short chain dehydrogenase; Provisional	99.95
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.95
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.95
PRK08324	681	short chain dehydrogenase; Validated	99.95
PRK07041	230	short chain dehydrogenase; Provisional	99.95
PRK12367	245	short chain dehydrogenase; Provisional	99.95
PRK08017	256	oxidoreductase; Provisional	99.94
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.94
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.93
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.93
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.92
PRK08219	227	short chain dehydrogenase; Provisional	99.92
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.91
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.91
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.89
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.89
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.89
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.86
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.84
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.83
PLN03209	576	translocon at the inner envelope of chloroplast su	99.83
PLN02583	297	cinnamoyl-CoA reductase	99.82
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.82
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.81
PRK06720	169	hypothetical protein; Provisional	99.8
PLN02653	340	GDP-mannose 4,6-dehydratase	99.79
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.78
PLN02650	351	dihydroflavonol-4-reductase	99.78
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.77
PLN00198	338	anthocyanidin reductase; Provisional	99.77
PLN02214	342	cinnamoyl-CoA reductase	99.76
PLN02240	352	UDP-glucose 4-epimerase	99.76
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.75
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.74
PLN02572	442	UDP-sulfoquinovose synthase	99.74
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.73
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.71
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.71
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.71
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.68
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.68
PLN02686	367	cinnamoyl-CoA reductase	99.68
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.68
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.67
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.66
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.66
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.65
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.62
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.61
PLN02427	386	UDP-apiose/xylose synthase	99.61
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.59
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.58
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.57
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.56
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.56
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.54
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.52
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.52
PLN02260	668	probable rhamnose biosynthetic enzyme	99.52
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.51
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.51
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.51
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.49
PLN02206	442	UDP-glucuronate decarboxylase	99.46
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.44
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.43
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.42
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.37
CHL00194	317	ycf39 Ycf39; Provisional	99.35
PLN02996	491	fatty acyl-CoA reductase	99.34
PRK07201	657	short chain dehydrogenase; Provisional	99.32
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.3
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.29
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.27
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.26
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.26
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.25
PLN02503	605	fatty acyl-CoA reductase 2	99.24
PRK05865	854	hypothetical protein; Provisional	99.22
PLN02778	298	3,5-epimerase/4-reductase	99.2
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.12
PLN02260	668	probable rhamnose biosynthetic enzyme	99.06
PRK08309	177	short chain dehydrogenase; Provisional	99.05
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.04
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.04
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.04
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.03
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.97
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.93
PLN00016	378	RNA-binding protein; Provisional	98.87
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.79
PRK12320	699	hypothetical protein; Provisional	98.79
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.73
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.7
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.62
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.62
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.59
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.55
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.52
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.49
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.48
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.45
COG2910	211	Putative NADH-flavin reductase [General function p	98.42
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.35
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.22
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.2
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.18
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.13
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.09
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.04
PRK09620	229	hypothetical protein; Provisional	98.01
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.99
PLN00106	323	malate dehydrogenase	97.95
PRK14982	340	acyl-ACP reductase; Provisional	97.92
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.82
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.8
PTZ00325	321	malate dehydrogenase; Provisional	97.78
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.64
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.62
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.53
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.51
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.5
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.46
KOG2774	366	consensus NAD dependent epimerase [General functio	97.45
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.42
PRK06849	389	hypothetical protein; Provisional	97.27
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.2
PRK05086	312	malate dehydrogenase; Provisional	97.19
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.07
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.07
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.07
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.06
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.05
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.04
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.03
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.03
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.98
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.97
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.94
COG3268	382	Uncharacterized conserved protein [Function unknow	96.93
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.89
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.88
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.88
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.87
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.85
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.81
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.79
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.77
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.75
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.71
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.69
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.67
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.65
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.61
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.6
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.55
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.53
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.52
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.51
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.47
PRK14968	188	putative methyltransferase; Provisional	96.47
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.46
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.45
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.41
PRK09496	453	trkA potassium transporter peripheral membrane com	96.27
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.25
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.23
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.23
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.2
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.2
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.19
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.18
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.16
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.14
PLN00203	519	glutamyl-tRNA reductase	96.11
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.08
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.04
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.03
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.02
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.0
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.0
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.97
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.96
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.96
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.95
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	95.94
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.91
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	95.91
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.91
PRK05442	326	malate dehydrogenase; Provisional	95.9
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.84
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.84
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.81
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.8
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.71
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.71
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.62
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.6
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.58
PRK08655	437	prephenate dehydrogenase; Provisional	95.58
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.56
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.55
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.54
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.52
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.49
PTZ00117	319	malate dehydrogenase; Provisional	95.39
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.36
PRK08223	287	hypothetical protein; Validated	95.34
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.31
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.3
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.29
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.27
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.21
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.19
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.16
PRK04148	134	hypothetical protein; Provisional	95.16
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.12
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.07
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.05
PRK09496	453	trkA potassium transporter peripheral membrane com	95.0
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	94.99
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.98
PRK08328	231	hypothetical protein; Provisional	94.93
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	94.9
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	94.9
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	94.87
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	94.85
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	94.83
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.81
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	94.79
PLN02602	350	lactate dehydrogenase	94.77
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	94.74
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.73
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	94.72
PTZ00354	334	alcohol dehydrogenase; Provisional	94.67
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	94.62
PRK06223	307	malate dehydrogenase; Reviewed	94.61
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	94.61
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	94.6
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	94.58
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	94.57
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.54
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	94.52
PLN02740	381	Alcohol dehydrogenase-like	94.52
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	94.51
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.48
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	94.44
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.42
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	94.41
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.36
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	94.34
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	94.33
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	94.24
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	94.24
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	94.23
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	94.22
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	94.21
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.21
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	94.2
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	94.11
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.11
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	94.1
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	94.1
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	94.01
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	93.99
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	93.98
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	93.93
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	93.92
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	93.9
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	93.88
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	93.87
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	93.87
PRK07411	390	hypothetical protein; Validated	93.77
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	93.76
PRK14851	679	hypothetical protein; Provisional	93.71
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	93.69
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	93.64
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	93.63
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	93.6
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	93.59
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	93.58
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.56
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	93.55
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.53
PLN02586	360	probable cinnamyl alcohol dehydrogenase	93.49
PLN02827	378	Alcohol dehydrogenase-like	93.49
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	93.48
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	93.4
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	93.38
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	93.33
PRK00421	461	murC UDP-N-acetylmuramate--L-alanine ligase; Provi	93.31
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.31
PRK13771	334	putative alcohol dehydrogenase; Provisional	93.3
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	93.3
PRK06719	157	precorrin-2 dehydrogenase; Validated	93.15
PRK12480	330	D-lactate dehydrogenase; Provisional	93.13
PLN02178	375	cinnamyl-alcohol dehydrogenase	93.12
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	93.09
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	93.05
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.99
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	92.96

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=6.9e-40  Score=279.32  Aligned_cols=216  Identities=29%  Similarity=0.359  Sum_probs=193.7

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+.+|+++|||||+|||.++|++|++.|++|++++|+.+++++++.++.+  .   .+.++.+|++|.++++++++.+
T Consensus         1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~---~~~~~~~DVtD~~~~~~~i~~~   75 (246)
T COG4221           1 MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--G---AALALALDVTDRAAVEAAIEAL   75 (246)
T ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--C---ceEEEeeccCCHHHHHHHHHHH
Confidence            7888999999999999999999999999999999999999999999999886  2   2899999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .++|+++|+||||||.....                       ++...+.++|+.++++|+.|.++.+++++|.|.+++.
T Consensus        76 ~~~~g~iDiLvNNAGl~~g~-----------------------~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~  132 (246)
T COG4221          76 PEEFGRIDILVNNAGLALGD-----------------------PLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKS  132 (246)
T ss_pred             HHhhCcccEEEecCCCCcCC-----------------------hhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCC
Confidence            99999999999999998653                       2334699999999999999999999999999999999


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |.||++||++|..+                                          +++.+.|+++|+++.+|++.|+.|
T Consensus       133 G~IiN~~SiAG~~~------------------------------------------y~~~~vY~ATK~aV~~fs~~LR~e  170 (246)
T COG4221         133 GHIINLGSIAGRYP------------------------------------------YPGGAVYGATKAAVRAFSLGLRQE  170 (246)
T ss_pred             ceEEEecccccccc------------------------------------------CCCCccchhhHHHHHHHHHHHHHH
Confidence            99999999887643                                          488999999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCC----------------CCCCCChhhhhhhhhhhhccCCCCCc
Q 022357          241 Y--PKFCVNCVCPGFVKTDINF----------------HAGILSVEEGAESPVKLALLPDGGPT  286 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~----------------~~~~~~~~~~a~~~~~~~~~~~~~~~  286 (298)
                      +  ++|||.+|+||.|.|....                ....++|++.|+.+++....|+...-
T Consensus       171 ~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~vnI  234 (246)
T COG4221         171 LAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQHVNI  234 (246)
T ss_pred             hcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCcccc
Confidence            9  7999999999999664321                12367999999999999998886643

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.7e-40  Score=289.12  Aligned_cols=192  Identities=29%  Similarity=0.424  Sum_probs=173.0

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+|+|+|||||+|||.++|++|+++|++++++.|..++++.+.+++++..... ++++++||++|.++++++++.+
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHHH
Confidence            567889999999999999999999999999999999999999999989998876554 6999999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      ..+||++|+||||||+.. ....+                      ..+.+++++.+++|++|++.++++++|+|++++.
T Consensus        86 ~~~fg~vDvLVNNAG~~~-~~~~~----------------------~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~  142 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISL-VGFLE----------------------DTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRND  142 (282)
T ss_pred             HHhcCCCCEEEecCcccc-ccccc----------------------cCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCC
Confidence            999999999999999986 32222                      3588899999999999999999999999998888


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||++|..+.                                          |..+.|++||+|+.+|+.+|+.|
T Consensus       143 GhIVvisSiaG~~~~------------------------------------------P~~~~Y~ASK~Al~~f~etLR~E  180 (282)
T KOG1205|consen  143 GHIVVISSIAGKMPL------------------------------------------PFRSIYSASKHALEGFFETLRQE  180 (282)
T ss_pred             CeEEEEeccccccCC------------------------------------------CcccccchHHHHHHHHHHHHHHH
Confidence            999999999988654                                          66789999999999999999999


Q ss_pred             CC--C--cEEEEeeCCeeecCCC
Q 022357          241 YP--K--FCVNCVCPGFVKTDIN  259 (298)
Q Consensus       241 ~~--~--i~vn~v~PG~v~t~~~  259 (298)
                      +.  +  |++ +|+||+|+|++.
T Consensus       181 l~~~~~~i~i-~V~PG~V~Te~~  202 (282)
T KOG1205|consen  181 LIPLGTIIII-LVSPGPIETEFT  202 (282)
T ss_pred             hhccCceEEE-EEecCceeeccc
Confidence            93  2  566 899999999965

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=6.2e-39  Score=280.54  Aligned_cols=215  Identities=25%  Similarity=0.336  Sum_probs=192.6

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |.+++++++||||||+|||.++|++|+++|++|++++|+.++++++.++++...+.  .+.++++|++++++++++.+++
T Consensus         1 ~~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v--~v~vi~~DLs~~~~~~~l~~~l   78 (265)
T COG0300           1 PGPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGV--EVEVIPADLSDPEALERLEDEL   78 (265)
T ss_pred             CCCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCc--eEEEEECcCCChhHHHHHHHHH
Confidence            56678899999999999999999999999999999999999999999999976533  2889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+..+.||+||||||+....                       ++.+.+.++..+++++|+.+...|+++++|.|.+++.
T Consensus        79 ~~~~~~IdvLVNNAG~g~~g-----------------------~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~  135 (265)
T COG0300          79 KERGGPIDVLVNNAGFGTFG-----------------------PFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGA  135 (265)
T ss_pred             HhcCCcccEEEECCCcCCcc-----------------------chhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99888999999999987554                       3445688899999999999999999999999999999


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |.||+++|.++..+.                                          |.++.|++||+++.+|+++|+.|
T Consensus       136 G~IiNI~S~ag~~p~------------------------------------------p~~avY~ATKa~v~~fSeaL~~E  173 (265)
T COG0300         136 GHIINIGSAAGLIPT------------------------------------------PYMAVYSATKAFVLSFSEALREE  173 (265)
T ss_pred             ceEEEEechhhcCCC------------------------------------------cchHHHHHHHHHHHHHHHHHHHH
Confidence            999999999988765                                          77899999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCC-----------CCCChhhhhhhhhhhhccCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHA-----------GILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~-----------~~~~~~~~a~~~~~~~~~~~  282 (298)
                      +  .||+|.+|+||+|.|++....           .++++++.++..+..+...+
T Consensus       174 L~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~k  228 (265)
T COG0300         174 LKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKALEKGK  228 (265)
T ss_pred             hcCCCeEEEEEecCccccccccccccccccccchhhccCHHHHHHHHHHHHhcCC
Confidence            9  479999999999999998521           25789999988888777543

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=8.6e-40  Score=267.25  Aligned_cols=226  Identities=21%  Similarity=0.242  Sum_probs=196.4

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ++.|+++||||++|||++++..|+++|++|++.+++....++.+..+..++.    ...++||+++.++++..+++..++
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~----h~aF~~DVS~a~~v~~~l~e~~k~   87 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGD----HSAFSCDVSKAHDVQNTLEEMEKS   87 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCc----cceeeeccCcHHHHHHHHHHHHHh
Confidence            5678999999999999999999999999999999998877777777765533    678999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhh--ccCCCC
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL--ELSDSP  161 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~--~~~~~g  161 (298)
                      +|++++||||||+.......                       .+..++|++.+.+|+.|.|+.+|++...|  .+++.+
T Consensus        88 ~g~psvlVncAGItrD~~Ll-----------------------rmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~  144 (256)
T KOG1200|consen   88 LGTPSVLVNCAGITRDGLLL-----------------------RMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGL  144 (256)
T ss_pred             cCCCcEEEEcCcccccccee-----------------------eccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCc
Confidence            99999999999998654322                       36889999999999999999999998874  344456


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||+.+..++                                          -+++.|++||+++.+|+|+.|+|+
T Consensus       145 sIiNvsSIVGkiGN------------------------------------------~GQtnYAAsK~GvIgftktaArEl  182 (256)
T KOG1200|consen  145 SIINVSSIVGKIGN------------------------------------------FGQTNYAASKGGVIGFTKTAAREL  182 (256)
T ss_pred             eEEeehhhhccccc------------------------------------------ccchhhhhhcCceeeeeHHHHHHH
Confidence            99999999998776                                          678999999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCCCCh-hhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGILSV-EEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~~~~-~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        ++||||.|+||+|.|||....++.-. .-....|+++...++++++...||+||.++|
T Consensus       183 a~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssY  242 (256)
T KOG1200|consen  183 ARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASSY  242 (256)
T ss_pred             hhcCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHHHHHHHHhcccccc
Confidence              79999999999999999876543322 2334569999999999999999999999887

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-38  Score=281.06  Aligned_cols=227  Identities=25%  Similarity=0.268  Sum_probs=184.2

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++......  ++.++++|+++.++++++++.+. +
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~i~~~~~~~~-~   82 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNV--DVSYIVADLTKREDLERTVKELK-N   82 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC--ceEEEEecCCCHHHHHHHHHHHH-h
Confidence            67899999999999999999999999999999999988888777777654222  38889999999999999999885 5


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      +|++|++|||||......                       +.+.+.++|++.+++|+.+++.++++++|.|++++.|+|
T Consensus        83 ~g~iD~lv~nag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~I  139 (263)
T PRK08339         83 IGEPDIFFFSTGGPKPGY-----------------------FMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRI  139 (263)
T ss_pred             hCCCcEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEE
Confidence            899999999999754321                       223588999999999999999999999999988778999


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+.                                          +....|+++|+|+++|+|+++.|+  
T Consensus       140 i~isS~~~~~~~------------------------------------------~~~~~y~asKaal~~l~~~la~el~~  177 (263)
T PRK08339        140 IYSTSVAIKEPI------------------------------------------PNIALSNVVRISMAGLVRTLAKELGP  177 (263)
T ss_pred             EEEcCccccCCC------------------------------------------CcchhhHHHHHHHHHHHHHHHHHhcc
Confidence            999998765433                                          667889999999999999999999  


Q ss_pred             CCcEEEEeeCCeeecCCCCCC-------CCCChhh-----hhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 PKFCVNCVCPGFVKTDINFHA-------GILSVEE-----GAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~-------~~~~~~~-----~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      .|||||+|+||+|+|++....       ....+++     ....|+.+...|++.+....|+.++.+.|
T Consensus       178 ~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~~  246 (263)
T PRK08339        178 KGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSY  246 (263)
T ss_pred             cCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhcchhcC
Confidence            489999999999999974321       0011111     12346666667777777777777776554

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=2.4e-37  Score=275.12  Aligned_cols=233  Identities=33%  Similarity=0.392  Sum_probs=197.1

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+.+|+++||||++|||+++|++|++.|++|++++|+.+.+++...++...+....++.++.||+++.++++++++.+
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999999998888876655556999999999999999999999


Q ss_pred             HHh-cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhcee-HHHHHHHHhhhhccC
Q 022357           81 KTQ-FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYG-TKQTCEALIPLLELS  158 (298)
Q Consensus        81 ~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~-~~~l~~~~~~~~~~~  158 (298)
                      .++ +|+||+||||||......                      ++.+.+.+.|+..+++|+.| .+.+.+.+.|+++++
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~----------------------~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~  140 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTG----------------------SILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKS  140 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCC----------------------ChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhc
Confidence            998 799999999999886542                      33457999999999999995 777778888888888


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCC-chhhhHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHS-SAYKVSKAVINAYTRIL  237 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~al~~l~~~l  237 (298)
                      ++|+|+++||..+..+.                                          ... .+|+++|+|+.+|+|++
T Consensus       141 ~gg~I~~~ss~~~~~~~------------------------------------------~~~~~~Y~~sK~al~~ltr~l  178 (270)
T KOG0725|consen  141 KGGSIVNISSVAGVGPG------------------------------------------PGSGVAYGVSKAALLQLTRSL  178 (270)
T ss_pred             CCceEEEEeccccccCC------------------------------------------CCCcccchhHHHHHHHHHHHH
Confidence            88999999998877543                                          222 78999999999999999


Q ss_pred             HHhC--CCcEEEEeeCCeeecCCCCCCCCC-----Chh----hhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          238 AKRY--PKFCVNCVCPGFVKTDINFHAGIL-----SVE----EGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       238 a~e~--~~i~vn~v~PG~v~t~~~~~~~~~-----~~~----~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      |.|+  .+||||+|+||+|.|++ ......     ...    .....|+++...|++.+....|++++.++|
T Consensus       179 A~El~~~gIRvN~v~PG~i~T~~-~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fla~~~asy  249 (270)
T KOG0725|consen  179 AKELAKHGIRVNSVSPGLVKTSL-RAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFLASDDASY  249 (270)
T ss_pred             HHHHhhcCcEEEEeecCcEeCCc-cccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhhcCccccc
Confidence            9999  58999999999999998 221111     111    123447999999999999999999988765

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.4e-37  Score=274.89  Aligned_cols=233  Identities=17%  Similarity=0.134  Sum_probs=181.5

Q ss_pred             CCcCCCcEEEEeCC--CCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGS--NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         1 m~~~~~~~vlITGa--s~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      |..+++|+++||||  ++|||+++|++|+++|++|++++|+. +..+.++++....+.   ...++||+++.++++++++
T Consensus         1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~   76 (261)
T PRK08690          1 MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDS---ELVFRCDVASDDEINQVFA   76 (261)
T ss_pred             CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCC---ceEEECCCCCHHHHHHHHH
Confidence            78889999999997  67999999999999999999998863 344555555443322   4578999999999999999


Q ss_pred             HHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                      .+.++++++|++|||||+........                  ..+.+.+.+.|+..+++|+.+++++++.++|.|+++
T Consensus        77 ~~~~~~g~iD~lVnnAG~~~~~~~~~------------------~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~  138 (261)
T PRK08690         77 DLGKHWDGLDGLVHSIGFAPKEALSG------------------DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR  138 (261)
T ss_pred             HHHHHhCCCcEEEECCccCCcccccc------------------chhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc
Confidence            99999999999999999864311000                  011235678899999999999999999999999754


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                       .|+||++||..+..+.                                          +++..|++||+|+.+|+++++
T Consensus       139 -~g~Iv~iss~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la  175 (261)
T PRK08690        139 -NSAIVALSYLGAVRAI------------------------------------------PNYNVMGMAKASLEAGIRFTA  175 (261)
T ss_pred             -CcEEEEEcccccccCC------------------------------------------CCcccchhHHHHHHHHHHHHH
Confidence             4899999998765432                                          667899999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCCCCCC---hhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHAGILS---VEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      .|+  .|||||+|+||+|+|++........   .......|+++...|++.+....|++++.+.|
T Consensus       176 ~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~~  240 (261)
T PRK08690        176 ACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSG  240 (261)
T ss_pred             HHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccCC
Confidence            999  4899999999999999754321100   01122356777777777777777777766554

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.8e-37  Score=276.05  Aligned_cols=228  Identities=21%  Similarity=0.248  Sum_probs=175.2

Q ss_pred             CCCcEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGas~--gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +++|++|||||++  |||+++|++|+++|++|++++|+.... +..+++....+.   ..++++|+++.++++++++.+.
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~-~~~~~~~~~~g~---~~~~~~Dv~d~~~v~~~~~~~~   80 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALG-KRVKPLAESLGS---DFVLPCDVEDIASVDAVFEALE   80 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHH-HHHHHHHHhcCC---ceEEeCCCCCHHHHHHHHHHHH
Confidence            5789999999997  999999999999999999999985432 233344322222   3578999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|++|+||||||.....+.                   ..++.+.+.++|++.+++|+.++++++++++|+|++  .|
T Consensus        81 ~~~g~iD~lVnnAG~~~~~~~-------------------~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G  139 (271)
T PRK06505         81 KKWGKLDFVVHAIGFSDKNEL-------------------KGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GG  139 (271)
T ss_pred             HHhCCCCEEEECCccCCCccc-------------------cCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--Cc
Confidence            999999999999997532100                   012334688999999999999999999999999973  48


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +.+..|++||+|+.+|+|+|+.|+
T Consensus       140 ~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaAl~~l~r~la~el  177 (271)
T PRK06505        140 SMLTLTYGGSTRVM------------------------------------------PNYNVMGVAKAALEASVRYLAADY  177 (271)
T ss_pred             eEEEEcCCCccccC------------------------------------------CccchhhhhHHHHHHHHHHHHHHH
Confidence            99999998765432                                          667889999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCCC-Ch--hhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGIL-SV--EEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~~-~~--~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .|||||+|+||+|+|++....... ..  ......|+++...|++.+...+|++++.++|
T Consensus       178 ~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~  239 (271)
T PRK06505        178 GPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSG  239 (271)
T ss_pred             hhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccccc
Confidence              489999999999999875322100 00  0012345666666777777777777665543

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-37  Score=273.00  Aligned_cols=232  Identities=22%  Similarity=0.242  Sum_probs=183.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |.++++|++|||||++|||++++++|+++|++|++++|+.+++++..++++..+.   ++.++++|+++.++++++++++
T Consensus         4 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~~   80 (253)
T PRK05867          4 LFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGG---KVVPVCCDVSQHQQVTSMLDQV   80 (253)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC---eEEEEEccCCCHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999998888888777776543   3788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-  159 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-  159 (298)
                      .+.++++|+||||||.....                       ++.+.+.+.|++.+++|+.+++.++++++|.|.+++ 
T Consensus        81 ~~~~g~id~lv~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  137 (253)
T PRK05867         81 TAELGGIDIAVCNAGIITVT-----------------------PMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQ  137 (253)
T ss_pred             HHHhCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC
Confidence            99999999999999976432                       122357788999999999999999999999997654 


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+....                                        .+.....|++||+|+++|+++++.
T Consensus       138 ~g~iv~~sS~~~~~~~----------------------------------------~~~~~~~Y~asKaal~~~~~~la~  177 (253)
T PRK05867        138 GGVIINTASMSGHIIN----------------------------------------VPQQVSHYCASKAAVIHLTKAMAV  177 (253)
T ss_pred             CcEEEEECcHHhcCCC----------------------------------------CCCCccchHHHHHHHHHHHHHHHH
Confidence            5799999997664321                                        012346899999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      ++  .||+||+|+||+|+|++...............|+++...|++++....|+.++.++|
T Consensus       178 e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~  238 (253)
T PRK05867        178 ELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSY  238 (253)
T ss_pred             HHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCC
Confidence            99  589999999999999986432111111222345555556666666666666655543

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.3e-37  Score=273.61  Aligned_cols=225  Identities=20%  Similarity=0.192  Sum_probs=177.9

Q ss_pred             CCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +++|+++||||+  +|||+++|++|+++|++|++++|+. +..+..+++..     ..+.++++|+++.++++++++.+.
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~-----~~~~~~~~Dl~~~~~v~~~~~~~~   78 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVD-----EEDLLVECDVASDESIERAFATIK   78 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhcc-----CceeEEeCCCCCHHHHHHHHHHHH
Confidence            568999999999  8999999999999999999999983 44444444332     137889999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|++|+||||||...+...                   ..++.+.+.++|+..+++|+.+++.+++.++|+|++  .|
T Consensus        79 ~~~g~iD~lv~nAg~~~~~~~-------------------~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g  137 (252)
T PRK06079         79 ERVGKIDGIVHAIAYAKKEEL-------------------GGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GA  137 (252)
T ss_pred             HHhCCCCEEEEcccccccccc-------------------cCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--Cc
Confidence            999999999999997643110                   112334688899999999999999999999999964  48


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +.+..|++||+|+.+|+++|+.|+
T Consensus       138 ~Iv~iss~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la~el  175 (252)
T PRK06079        138 SIVTLTYFGSERAI------------------------------------------PNYNVMGIAKAALESSVRYLARDL  175 (252)
T ss_pred             eEEEEeccCccccC------------------------------------------CcchhhHHHHHHHHHHHHHHHHHh
Confidence            99999997765432                                          567889999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCCCCh----hhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGILSV----EEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~~~~----~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .||+||+|+||+|+|++...... .+    +...+.|+.+..+|++.+....|+.++.+.|
T Consensus       176 ~~~gI~vn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~  237 (252)
T PRK06079        176 GKKGIRVNAISAGAVKTLAVTGIKG-HKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLSTG  237 (252)
T ss_pred             hhcCcEEEEEecCcccccccccCCC-hHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCccccc
Confidence              58999999999999997532210 11    1122346666677777777777777776544

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=4.1e-37  Score=272.98  Aligned_cols=232  Identities=24%  Similarity=0.259  Sum_probs=181.4

Q ss_pred             CCcCCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCch--hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHH
Q 022357            1 MAEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSL   76 (298)
Q Consensus         1 m~~~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~   76 (298)
                      |..+++|+++||||+  +|||+++|++|+++|++|++++|+.+  +..+.++++......   ..++++|+++.++++++
T Consensus         1 ~~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dl~d~~~v~~~   77 (258)
T PRK07370          1 MLDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNP---SLFLPCDVQDDAQIEET   77 (258)
T ss_pred             CcccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCc---ceEeecCcCCHHHHHHH
Confidence            667889999999986  89999999999999999999887643  345556666544322   67889999999999999


Q ss_pred             HHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhc
Q 022357           77 ADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE  156 (298)
Q Consensus        77 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~  156 (298)
                      ++.+.+++|++|+||||||+.....                   .+.++.+.+.+.|++.+++|+.++++++++++|.|+
T Consensus        78 ~~~~~~~~g~iD~lv~nag~~~~~~-------------------~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~  138 (258)
T PRK07370         78 FETIKQKWGKLDILVHCLAFAGKEE-------------------LIGDFSATSREGFARALEISAYSLAPLCKAAKPLMS  138 (258)
T ss_pred             HHHHHHHcCCCCEEEEcccccCccc-------------------ccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHh
Confidence            9999999999999999999753210                   112334568899999999999999999999999996


Q ss_pred             cCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHH
Q 022357          157 LSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI  236 (298)
Q Consensus       157 ~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~  236 (298)
                      +  .|+||++||..+..+.                                          +....|++||+|+.+|+++
T Consensus       139 ~--~g~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~  174 (258)
T PRK07370        139 E--GGSIVTLTYLGGVRAI------------------------------------------PNYNVMGVAKAALEASVRY  174 (258)
T ss_pred             h--CCeEEEEeccccccCC------------------------------------------cccchhhHHHHHHHHHHHH
Confidence            4  4899999997765432                                          6678999999999999999


Q ss_pred             HHHhC--CCcEEEEeeCCeeecCCCCCCC---CCChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          237 LAKRY--PKFCVNCVCPGFVKTDINFHAG---ILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       237 la~e~--~~i~vn~v~PG~v~t~~~~~~~---~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      |+.|+  .||+||+|+||+|+|++.....   ..........|+.+...|++.+....|+.++.+.|
T Consensus       175 la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~  241 (258)
T PRK07370        175 LAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASG  241 (258)
T ss_pred             HHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhcc
Confidence            99999  4899999999999999753211   00001112346666666777777777777766543

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.6e-37  Score=272.34  Aligned_cols=232  Identities=18%  Similarity=0.148  Sum_probs=178.6

Q ss_pred             CCcCCCcEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         1 m~~~~~~~vlITGas~--gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      |.++++|++|||||++  |||+++|++|+++|++|++++|+ .++.+.++++......   ..+++||+++.++++++++
T Consensus         1 ~~~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~v~~~~~   76 (262)
T PRK07984          1 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGS---DIVLPCDVAEDASIDAMFA   76 (262)
T ss_pred             CcccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCC---ceEeecCCCCHHHHHHHHH
Confidence            7788999999999986  99999999999999999999987 3445556666544332   5678999999999999999


Q ss_pred             HHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                      .+.+++|++|++|||||+........                  ..+.+.+.+.|++.+++|+.+++.+++.+.|.|+  
T Consensus        77 ~~~~~~g~iD~linnAg~~~~~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--  136 (262)
T PRK07984         77 ELGKVWPKFDGFVHSIGFAPGDQLDG------------------DYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--  136 (262)
T ss_pred             HHHhhcCCCCEEEECCccCCccccCC------------------cchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--
Confidence            99999999999999999753211000                  0122357789999999999999999999999775  


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                      +.|+||++||..+..+.                                          +....|++||+|+++|+|+++
T Consensus       137 ~~g~Iv~iss~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la  174 (262)
T PRK07984        137 PGSALLTLSYLGAERAI------------------------------------------PNYNVMGLAKASLEANVRYMA  174 (262)
T ss_pred             CCcEEEEEecCCCCCCC------------------------------------------CCcchhHHHHHHHHHHHHHHH
Confidence            34899999997765432                                          567889999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCCCCCC---hhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHAGILS---VEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      .|+  .+||||+|+||+|+|++........   .......|+.+...|++++....|+.++.++|
T Consensus       175 ~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~  239 (262)
T PRK07984        175 NAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG  239 (262)
T ss_pred             HHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCccccc
Confidence            999  4899999999999998643211100   01112345566666667777777776665543

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-37  Score=271.17  Aligned_cols=227  Identities=22%  Similarity=0.241  Sum_probs=177.9

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..+.+|++|||||++|||+++|++|+++|++|++++|+..  +...+.++..+.   ++.++++|+++.++++++++++.
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~   78 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGR---KFHFITADLIQQKDIDSIVSQAV   78 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCC---eEEEEEeCCCCHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999988643  333344444332   38899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-C
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-S  160 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~  160 (298)
                      +.+|++|+||||||.....+                       +.+.+.++|++.+++|+.+++.++++++|.|.+++ .
T Consensus        79 ~~~g~iD~lv~~ag~~~~~~-----------------------~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~  135 (251)
T PRK12481         79 EVMGHIDILINNAGIIRRQD-----------------------LLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNG  135 (251)
T ss_pred             HHcCCCCEEEECCCcCCCCC-----------------------cccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCC
Confidence            99999999999999864321                       12357789999999999999999999999997654 5


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|+++|+++++.|
T Consensus       136 g~ii~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~l~~~la~e  173 (251)
T PRK12481        136 GKIINIASMLSFQGG------------------------------------------IRVPSYTASKSAVMGLTRALATE  173 (251)
T ss_pred             CEEEEeCChhhcCCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHH
Confidence            899999998776443                                          45678999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCCCCC---hhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAGILS---VEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +  .||+||+|+||+|+|++........   .....+.|+.+...|++.+....|+.++.+.|
T Consensus       174 ~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~  236 (251)
T PRK12481        174 LSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDY  236 (251)
T ss_pred             HhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            9  5899999999999999764321100   01122345555556666666666666665543

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.1e-37  Score=274.28  Aligned_cols=229  Identities=20%  Similarity=0.209  Sum_probs=176.1

Q ss_pred             cCCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .+.+|++|||||+  +|||+++|++|+++|++|++++|+.+ ..+.++++......  . .++++|+++.++++++++.+
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~--~-~~~~~Dv~d~~~v~~~~~~i   77 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGS--D-YVYELDVSKPEHFKSLAESL   77 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCC--c-eEEEecCCCHHHHHHHHHHH
Confidence            3578999999997  89999999999999999999999853 33334444332222  1 57899999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+++|++|+||||||+.....                   .+.++.+.+.++|++.+++|+.+++++++.++|.|++  .
T Consensus        78 ~~~~g~iDilVnnAG~~~~~~-------------------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~  136 (274)
T PRK08415         78 KKDLGKIDFIVHSVAFAPKEA-------------------LEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--G  136 (274)
T ss_pred             HHHcCCCCEEEECCccCcccc-------------------cccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--C
Confidence            999999999999999753210                   0112334688999999999999999999999999964  4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +.+..|++||+|+.+|+++|+.|
T Consensus       137 g~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la~e  174 (274)
T PRK08415        137 ASVLTLSYLGGVKYV------------------------------------------PHYNVMGVAKAALESSVRYLAVD  174 (274)
T ss_pred             CcEEEEecCCCccCC------------------------------------------CcchhhhhHHHHHHHHHHHHHHH
Confidence            899999997765432                                          55788999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCCCCC---hhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAGILS---VEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +  .||+||+|+||+|+|++........   .......|+.+...|++.+....|++++.+.|
T Consensus       175 l~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~~~  237 (274)
T PRK08415        175 LGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSSG  237 (274)
T ss_pred             hhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhhhc
Confidence            9  5899999999999998653221100   01112346666667777777777777665543

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-36  Score=272.14  Aligned_cols=191  Identities=28%  Similarity=0.400  Sum_probs=166.1

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+++|++|||||++|||++++++|+++|++|++++|+ +++.+..+++...+.+   +.++++|+++.++++++++.+
T Consensus         1 m~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~~~~~~~~~   76 (272)
T PRK08589          1 MKRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGK---AKAYHVDISDEQQVKDFASEI   76 (272)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCe---EEEEEeecCCHHHHHHHHHHH
Confidence            778899999999999999999999999999999999999 7777777777654433   889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||......                      ++.+.+.+.|++.+++|+.+++.+++.++|.|++++ 
T Consensus        77 ~~~~g~id~li~~Ag~~~~~~----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-  133 (272)
T PRK08589         77 KEQFGRVDVLFNNAGVDNAAG----------------------RIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-  133 (272)
T ss_pred             HHHcCCcCEEEECCCCCCCCC----------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence            999999999999999763211                      112357788999999999999999999999998654 


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|+++|+++++.+
T Consensus       134 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la~e  171 (272)
T PRK08589        134 GSIINTSSFSGQAAD------------------------------------------LYRSGYNAAKGAVINFTKSIAIE  171 (272)
T ss_pred             CEEEEeCchhhcCCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHH
Confidence            899999998766432                                          55688999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      +  .||+||+|+||+|+|++..
T Consensus       172 ~~~~gI~v~~v~PG~v~T~~~~  193 (272)
T PRK08589        172 YGRDGIRANAIAPGTIETPLVD  193 (272)
T ss_pred             hhhcCeEEEEEecCcccCchhh
Confidence            9  4899999999999999753

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.1e-36  Score=263.35  Aligned_cols=211  Identities=24%  Similarity=0.279  Sum_probs=191.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +.+|++||||||++||||++|++||++|+++++.+.|.+..++.++++++.+    .++.+.||+++.+++.+..+++++
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g----~~~~y~cdis~~eei~~~a~~Vk~  110 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG----EAKAYTCDISDREEIYRLAKKVKK  110 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC----ceeEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999999999999764    399999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|.+|+||||||+.......                       +.+.+++++++++|+.|+|+.+++|+|.|.+.+.|+
T Consensus       111 e~G~V~ILVNNAGI~~~~~ll-----------------------~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GH  167 (300)
T KOG1201|consen  111 EVGDVDILVNNAGIVTGKKLL-----------------------DCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGH  167 (300)
T ss_pred             hcCCceEEEeccccccCCCcc-----------------------CCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCce
Confidence            999999999999998765333                       468899999999999999999999999999988999


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||.++|++|..+.                                          ++...|++||+|+.+|.++|..|+ 
T Consensus       168 IV~IaS~aG~~g~------------------------------------------~gl~~YcaSK~a~vGfhesL~~EL~  205 (300)
T KOG1201|consen  168 IVTIASVAGLFGP------------------------------------------AGLADYCASKFAAVGFHESLSMELR  205 (300)
T ss_pred             EEEehhhhcccCC------------------------------------------ccchhhhhhHHHHHHHHHHHHHHHH
Confidence            9999999998765                                          778999999999999999999998 


Q ss_pred             ----CCcEEEEeeCCeeecCCCCC-------CCCCChhhhhhhhhhhhccCC
Q 022357          242 ----PKFCVNCVCPGFVKTDINFH-------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       242 ----~~i~vn~v~PG~v~t~~~~~-------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                          .+|+...|+|+.++|.|...       .+.++|+..|+.++......+
T Consensus       206 ~~~~~~IktTlv~P~~i~Tgmf~~~~~~~~l~P~L~p~~va~~Iv~ai~~n~  257 (300)
T KOG1201|consen  206 ALGKDGIKTTLVCPYFINTGMFDGATPFPTLAPLLEPEYVAKRIVEAILTNQ  257 (300)
T ss_pred             hcCCCCeeEEEEeeeeccccccCCCCCCccccCCCCHHHHHHHHHHHHHcCC
Confidence                47999999999999988762       357899999999888876544

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-37  Score=271.14  Aligned_cols=232  Identities=28%  Similarity=0.348  Sum_probs=186.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++..... ..++.++++|+++.++++.+++++
T Consensus         2 ~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~   80 (260)
T PRK07063          2 MNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVA-GARVLAVPADVTDAASVAAAVAAA   80 (260)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccC-CceEEEEEccCCCHHHHHHHHHHH
Confidence            4457899999999999999999999999999999999998888888888775311 123889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||.......                       ...+.++|++.+++|+.++++++++++|.|++++.
T Consensus        81 ~~~~g~id~li~~ag~~~~~~~-----------------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  137 (260)
T PRK07063         81 EEAFGPLDVLVNNAGINVFADP-----------------------LAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGR  137 (260)
T ss_pred             HHHhCCCcEEEECCCcCCCCCh-----------------------hhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCC
Confidence            9999999999999997543211                       12467889999999999999999999999987777


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          ++...|++||+|+.+|+++++.+
T Consensus       138 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e  175 (260)
T PRK07063        138 GSIVNIASTHAFKII------------------------------------------PGCFPYPVAKHGLLGLTRALGIE  175 (260)
T ss_pred             eEEEEECChhhccCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHH
Confidence            899999998765432                                          55678999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCC--CCCChh-----hhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHA--GILSVE-----EGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~--~~~~~~-----~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +  .|||||+|+||+|+|++....  ....++     .....|+.+..+|++.+....|+.++.+.|
T Consensus       176 l~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~~  242 (260)
T PRK07063        176 YAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPF  242 (260)
T ss_pred             hCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccc
Confidence            9  489999999999999985321  001111     112235566666667777777777665544

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-36  Score=263.10  Aligned_cols=226  Identities=29%  Similarity=0.311  Sum_probs=184.7

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+++|+++||||++|||++++++|+++|++|++++|+++++++..+++...+.+   +.++.+|+++.++++++++++
T Consensus         1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~   77 (254)
T PRK07478          1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGE---AVALAGDVRDEAYAKALVALA   77 (254)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHH
Confidence            77889999999999999999999999999999999999988888888877765433   788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .++++++|+||||||.....                      .++.+.+.+++++.+++|+.+++.+++.++|.|++++.
T Consensus        78 ~~~~~~id~li~~ag~~~~~----------------------~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~  135 (254)
T PRK07478         78 VERFGGLDIAFNNAGTLGEM----------------------GPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGG  135 (254)
T ss_pred             HHhcCCCCEEEECCCCCCCC----------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999975321                      12223578899999999999999999999999988778


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+...                                         ..+....|++||+|+++|+++++.+
T Consensus       136 ~~iv~~sS~~~~~~-----------------------------------------~~~~~~~Y~~sK~a~~~~~~~la~e  174 (254)
T PRK07478        136 GSLIFTSTFVGHTA-----------------------------------------GFPGMAAYAASKAGLIGLTQVLAAE  174 (254)
T ss_pred             ceEEEEechHhhcc-----------------------------------------CCCCcchhHHHHHHHHHHHHHHHHH
Confidence            99999999766421                                         1155789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCC-----------------CCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAG-----------------ILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +  .+|+||+|+||+|+|++.....                 ..+|++.++..+.++.......+|..+..
T Consensus       175 ~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~  245 (254)
T PRK07478        175 YGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGTALLV  245 (254)
T ss_pred             HhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCeEEe
Confidence            8  4899999999999999754221                 23566666666665554444444444433

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2e-36  Score=268.91  Aligned_cols=228  Identities=21%  Similarity=0.207  Sum_probs=177.5

Q ss_pred             CCCcEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGas~--gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +++|+++||||++  |||+++|++|+++|++|++++|+. +.++.++++....+.   ..++++|+++.++++++++.+.
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~---~~~~~~Dv~~~~~v~~~~~~~~   81 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC---NFVSELDVTNPKSISNLFDDIK   81 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC---ceEEEccCCCHHHHHHHHHHHH
Confidence            5789999999998  999999999999999999999874 344445555443222   3467899999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|++|+||||||......                   ...++.+.+.++|++.+++|+.+++.+++.++|+|++  .|
T Consensus        82 ~~~g~iDilVnnag~~~~~~-------------------~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G  140 (260)
T PRK06603         82 EKWGSFDFLLHGMAFADKNE-------------------LKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GG  140 (260)
T ss_pred             HHcCCccEEEEccccCCccc-------------------ccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--Cc
Confidence            99999999999999753210                   0012334688999999999999999999999999963  48


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|+.+|+++|+.|+
T Consensus       141 ~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la~el  178 (260)
T PRK06603        141 SIVTLTYYGAEKVI------------------------------------------PNYNVMGVAKAALEASVKYLANDM  178 (260)
T ss_pred             eEEEEecCccccCC------------------------------------------CcccchhhHHHHHHHHHHHHHHHh
Confidence            99999997765332                                          567889999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCCCC---hhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGILS---VEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .+|+||+|+||+|+|++........   .......|+.+...|++.+....|+.++.+.|
T Consensus       179 ~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~  240 (260)
T PRK06603        179 GENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKG  240 (260)
T ss_pred             hhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccc
Confidence              5899999999999999753221110   01112346666667777777777777776654

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=269.04  Aligned_cols=199  Identities=19%  Similarity=0.163  Sum_probs=165.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |..+++|+++||||++|||+++|++|+++|++|++++| +.+.++...+++....+.  ++.++++|+++.++++++++.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~   80 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGI--KAKAYPLNILEPETYKELFKK   80 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCC--ceEEEEcCCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999998875 455566666666543222  388999999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+.++++|+||||||.......                 ..+.++.+.+.+.+.+.+++|+.+++.+++.++|.|++++
T Consensus        81 ~~~~~g~id~lv~nAg~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  143 (260)
T PRK08416         81 IDEDFDRVDFFISNAIISGRAVV-----------------GGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG  143 (260)
T ss_pred             HHHhcCCccEEEECccccccccc-----------------cccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC
Confidence            99999999999999997532110                 0112333467788999999999999999999999998777


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          +....|++||+|+++|+++|+.
T Consensus       144 ~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~  181 (260)
T PRK08416        144 GGSIISLSSTGNLVYI------------------------------------------ENYAGHGTSKAAVETMVKYAAT  181 (260)
T ss_pred             CEEEEEEeccccccCC------------------------------------------CCcccchhhHHHHHHHHHHHHH
Confidence            7899999997765432                                          5677899999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCC
Q 022357          240 RY--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      |+  .||+||+|+||+++|++..
T Consensus       182 el~~~gi~v~~v~PG~i~T~~~~  204 (260)
T PRK08416        182 ELGEKNIRVNAVSGGPIDTDALK  204 (260)
T ss_pred             HhhhhCeEEEEEeeCcccChhhh
Confidence            99  4899999999999999753

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.4e-36  Score=268.36  Aligned_cols=232  Identities=18%  Similarity=0.148  Sum_probs=175.8

Q ss_pred             CCcCCCcEEEEeCC--CCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGS--NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         1 m~~~~~~~vlITGa--s~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      |..+++|+++||||  ++|||+++|++|+++|++|++++|... ..+.++++......   ..++++|++++++++++++
T Consensus         1 ~~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~   76 (260)
T PRK06997          1 MGFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGS---DLVFPCDVASDEQIDALFA   76 (260)
T ss_pred             CCccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcCC---cceeeccCCCHHHHHHHHH
Confidence            77788999999996  689999999999999999999876522 22333333332222   3468999999999999999


Q ss_pred             HHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                      .+.+++|++|++|||||.........                  ..+.+.+.++|++.+++|+.++++++++++|+|+  
T Consensus        77 ~~~~~~g~iD~lvnnAG~~~~~~~~~------------------~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--  136 (260)
T PRK06997         77 SLGQHWDGLDGLVHSIGFAPREAIAG------------------DFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--  136 (260)
T ss_pred             HHHHHhCCCcEEEEccccCCcccccc------------------ccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--
Confidence            99999999999999999754311000                  0012357789999999999999999999999995  


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                      +.|+||++||..+..+.                                          +....|++||+|+.+|+++|+
T Consensus       137 ~~g~Ii~iss~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la  174 (260)
T PRK06997        137 DDASLLTLSYLGAERVV------------------------------------------PNYNTMGLAKASLEASVRYLA  174 (260)
T ss_pred             CCceEEEEeccccccCC------------------------------------------CCcchHHHHHHHHHHHHHHHH
Confidence            34899999997765332                                          567789999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCCCCCC---hhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHAGILS---VEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      .|+  .|||||+|+||+|+|++........   .......|+.+...|++++....|+.++.+.|
T Consensus       175 ~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~  239 (260)
T PRK06997        175 VSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLASG  239 (260)
T ss_pred             HHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhCccccC
Confidence            999  4899999999999998753221100   01122346666667777777777777766554

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-36  Score=265.13  Aligned_cols=232  Identities=22%  Similarity=0.263  Sum_probs=187.2

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |.++++|+++||||++|||+++|++|+++|++|++++|+.+ .+....++++..+.+   +.++++|++++++++++++.
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~---~~~~~~D~~~~~~i~~~~~~   79 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRR---AIQIAADVTSKADLRAAVAR   79 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCc---eEEEEcCCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999999864 456666667654432   78899999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+.++++|+||||||.....+                       +.+.+.+++++.+++|+.+++.++++++|.|++++
T Consensus        80 ~~~~~g~id~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  136 (254)
T PRK06114         80 TEAELGALTLAVNAAGIANANP-----------------------AEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG  136 (254)
T ss_pred             HHHHcCCCCEEEECCCCCCCCC-----------------------hHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC
Confidence            9999999999999999864321                       22357889999999999999999999999998777


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                        +......|++||+|+++|+++++.
T Consensus       137 ~~~iv~isS~~~~~~~----------------------------------------~~~~~~~Y~~sKaa~~~l~~~la~  176 (254)
T PRK06114        137 GGSIVNIASMSGIIVN----------------------------------------RGLLQAHYNASKAGVIHLSKSLAM  176 (254)
T ss_pred             CcEEEEECchhhcCCC----------------------------------------CCCCcchHHHHHHHHHHHHHHHHH
Confidence            7999999998876432                                        002257899999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCCCCCC--hhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHAGILS--VEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~~~~~--~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      |+  .||+||+|+||+++|++........  .+.....|+++..+|++++....|++++.++|
T Consensus       177 e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~  239 (254)
T PRK06114        177 EWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASF  239 (254)
T ss_pred             HHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            98  5899999999999999864321110  11123456777777777777778877776654

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.9e-36  Score=267.44  Aligned_cols=232  Identities=17%  Similarity=0.152  Sum_probs=171.7

Q ss_pred             CCcCCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         1 m~~~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      |..+.+|+++||||+  +|||+++|++|+++|++|++++|+... .+.++++..... ..++.++++|+++.++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~   79 (257)
T PRK08594          2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLE-GQESLLLPCDVTSDEEITACFE   79 (257)
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcC-CCceEEEecCCCCHHHHHHHHH
Confidence            445679999999997  899999999999999999999876422 222222322111 1237889999999999999999


Q ss_pred             HHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                      ++.+++|++|++|||||+.....                   .+.++.+.+.+.|.+.+++|+.++++++++++|+|++ 
T Consensus        80 ~~~~~~g~ld~lv~nag~~~~~~-------------------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-  139 (257)
T PRK08594         80 TIKEEVGVIHGVAHCIAFANKED-------------------LRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE-  139 (257)
T ss_pred             HHHHhCCCccEEEECcccCCCCc-------------------CCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc-
Confidence            99999999999999999753210                   0112334677889999999999999999999999964 


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                       .|+||++||..+..+.                                          +.+..|++||+|+++|+++++
T Consensus       140 -~g~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la  176 (257)
T PRK08594        140 -GGSIVTLTYLGGERVV------------------------------------------QNYNVMGVAKASLEASVKYLA  176 (257)
T ss_pred             -CceEEEEcccCCccCC------------------------------------------CCCchhHHHHHHHHHHHHHHH
Confidence             4899999998776432                                          567899999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCCCCCC---hhhhhhhhhhhhccCCCCCcceEeccCccCC
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHAGILS---VEEGAESPVKLALLPDGGPTGRFFLRKEEAP  297 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~  297 (298)
                      .|+  .|||||+|+||+|+|++........   .......|+.+...|++.+...+|+.++.++
T Consensus       177 ~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~~  240 (257)
T PRK08594        177 NDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDLSR  240 (257)
T ss_pred             HHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCcccc
Confidence            999  4899999999999998643211000   0011122444444555555555555555443

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4e-36  Score=266.55  Aligned_cols=229  Identities=18%  Similarity=0.197  Sum_probs=172.6

Q ss_pred             CcCCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         2 ~~~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      ..+++|++|||||+  +|||+++|++|+++|++|++++|+.+.. +.++++......   ..+++||+++.+++++++++
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~~~~---~~~~~~D~~~~~~v~~~~~~   81 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEELDA---PIFLPLDVREPGQLEAVFAR   81 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHhhcc---ceEEecCcCCHHHHHHHHHH
Confidence            34678999999998  5999999999999999999999986432 223333322111   56789999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+++|++|++|||||......                   .+.++.+.+.++|++.+++|+.+++++++.++|.|++  
T Consensus        82 ~~~~~g~ld~lv~nAg~~~~~~-------------------~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--  140 (258)
T PRK07533         82 IAEEWGRLDFLLHSIAFAPKED-------------------LHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--  140 (258)
T ss_pred             HHHHcCCCCEEEEcCccCCccc-------------------ccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--
Confidence            9999999999999999753210                   0112334688999999999999999999999999963  


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          +.+..|++||+|+.+|+++|+.
T Consensus       141 ~g~Ii~iss~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la~  178 (258)
T PRK07533        141 GGSLLTMSYYGAEKVV------------------------------------------ENYNLMGPVKAALESSVRYLAA  178 (258)
T ss_pred             CCEEEEEeccccccCC------------------------------------------ccchhhHHHHHHHHHHHHHHHH
Confidence            4899999997664322                                          5678899999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCCCCCCh---hhhhhhhhhhhccCCCCCcceEeccCccCC
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHAGILSV---EEGAESPVKLALLPDGGPTGRFFLRKEEAP  297 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~~~~~~---~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~  297 (298)
                      |+  .||+||+|+||+|+|++.........   +.....|+.+...|++.+...+|++++.+.
T Consensus       179 el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~~~~  241 (258)
T PRK07533        179 ELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASDAAR  241 (258)
T ss_pred             HhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhChhhc
Confidence            99  58999999999999998543211110   111223445555555566666666655443

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-36  Score=273.60  Aligned_cols=198  Identities=22%  Similarity=0.244  Sum_probs=161.9

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc----------hhhHHHHHHHHhcCCCCcceeEEEeccCcH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE----------KRGLEAVEKLKASGVDPELLLFHQLDISDL   70 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~----------~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~   70 (298)
                      |..+++|+++||||++|||+++|++|+++|++|++++|+.          +++.+..++++..+..   +.++++|++++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~Dv~~~   79 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGR---GIAVQVDHLVP   79 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCc---eEEEEcCCCCH
Confidence            5567899999999999999999999999999999999984          3455556666554332   77899999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcc-ccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHH
Q 022357           71 ASVSSLADFIKTQFGKLDILANNA-GIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE  149 (298)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~lv~nA-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  149 (298)
                      ++++++++++.+++|+||+||||| |.......                   ..++.+.+.+.|++.+++|+.+++.+++
T Consensus        80 ~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~-------------------~~~~~~~~~~~~~~~~~~n~~~~~~~~~  140 (305)
T PRK08303         80 EQVRALVERIDREQGRLDILVNDIWGGEKLFEW-------------------GKPVWEHSLDKGLRMLRLAIDTHLITSH  140 (305)
T ss_pred             HHHHHHHHHHHHHcCCccEEEECCccccccccc-------------------CCchhhcCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999999999999999 74211000                   0123345778899999999999999999


Q ss_pred             HHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHH
Q 022357          150 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAV  229 (298)
Q Consensus       150 ~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a  229 (298)
                      +++|+|++++.|+||++||..+....                                       ...+....|++||+|
T Consensus       141 ~~lp~m~~~~~g~IV~isS~~~~~~~---------------------------------------~~~~~~~~Y~asKaa  181 (305)
T PRK08303        141 FALPLLIRRPGGLVVEITDGTAEYNA---------------------------------------THYRLSVFYDLAKTS  181 (305)
T ss_pred             HHHHHhhhCCCcEEEEECCccccccC---------------------------------------cCCCCcchhHHHHHH
Confidence            99999987767999999996653211                                       111346789999999


Q ss_pred             HHHHHHHHHHhC--CCcEEEEeeCCeeecCCC
Q 022357          230 INAYTRILAKRY--PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       230 l~~l~~~la~e~--~~i~vn~v~PG~v~t~~~  259 (298)
                      +.+|+++|+.|+  .|||||+|+||+|+|++.
T Consensus       182 l~~lt~~La~el~~~gIrVn~v~PG~v~T~~~  213 (305)
T PRK08303        182 VNRLAFSLAHELAPHGATAVALTPGWLRSEMM  213 (305)
T ss_pred             HHHHHHHHHHHhhhcCcEEEEecCCccccHHH
Confidence            999999999999  489999999999999974

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.7e-36  Score=266.86  Aligned_cols=228  Identities=17%  Similarity=0.211  Sum_probs=173.9

Q ss_pred             CCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +.+|++|||||+  +|||+++|++|+++|++|++++|+.. ..+.++++....+.   ..++++|+++.++++++++.+.
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~---~~~~~~Dl~~~~~v~~~~~~~~   83 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGA---FVAGHCDVTDEASIDAVFETLE   83 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCC---ceEEecCCCCHHHHHHHHHHHH
Confidence            467999999997  89999999999999999999988732 33334444332222   5578999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|++|+||||||+.....                   .+.++.+.+.+.|++.+++|+.+++++++.++|+|++  .|
T Consensus        84 ~~~g~iD~lv~nAG~~~~~~-------------------~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g  142 (272)
T PRK08159         84 KKWGKLDFVVHAIGFSDKDE-------------------LTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GG  142 (272)
T ss_pred             HhcCCCcEEEECCcccCccc-------------------cccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--Cc
Confidence            99999999999999764210                   0112334678899999999999999999999999963  48


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+                                          .+.+..|++||+|+.+|+++|+.|+
T Consensus       143 ~Iv~iss~~~~~~------------------------------------------~p~~~~Y~asKaal~~l~~~la~el  180 (272)
T PRK08159        143 SILTLTYYGAEKV------------------------------------------MPHYNVMGVAKAALEASVKYLAVDL  180 (272)
T ss_pred             eEEEEeccccccC------------------------------------------CCcchhhhhHHHHHHHHHHHHHHHh
Confidence            9999999765433                                          2667889999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCCCCh---hhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGILSV---EEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~~~~---~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .+|+||+|+||+|+|++.........   ......|+.+...|++++...+|+.++.+.|
T Consensus       181 ~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~~  242 (272)
T PRK08159        181 GPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRG  242 (272)
T ss_pred             cccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCccccC
Confidence              58999999999999986532211100   0012345666666667777777776665543

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-35  Score=262.92  Aligned_cols=231  Identities=24%  Similarity=0.255  Sum_probs=183.4

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+++|++|||||++|||++++++|+++|++|++++|+.++++...+++.   .   ++.++++|+++.++++++++++
T Consensus         1 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~~~D~~~~~~~~~~~~~~   74 (263)
T PRK06200          1 MGWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFG---D---HVLVVEGDVTSYADNQRAVDQT   74 (263)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---C---cceEEEccCCCHHHHHHHHHHH
Confidence            677889999999999999999999999999999999999877665554431   1   2788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||+.........              ..+    +...+.|++.+++|+.+++.+++.++|.|+++ .
T Consensus        75 ~~~~g~id~li~~ag~~~~~~~~~~--------------~~~----~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~  135 (263)
T PRK06200         75 VDAFGKLDCFVGNAGIWDYNTSLVD--------------IPA----ETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-G  135 (263)
T ss_pred             HHhcCCCCEEEECCCCcccCCCccc--------------CCh----hHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-C
Confidence            9999999999999997542111100              000    01223488999999999999999999998754 4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          ++...|++||+|++.|+++++.+
T Consensus       136 g~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e  173 (263)
T PRK06200        136 GSMIFTLSNSSFYPG------------------------------------------GGGPLYTASKHAVVGLVRQLAYE  173 (263)
T ss_pred             CEEEEECChhhcCCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHH
Confidence            899999998766433                                          55678999999999999999999


Q ss_pred             C-CCcEEEEeeCCeeecCCCCCCCC------------CChhhhhhhhhhhhccCCCCCcceEeccCcc-CCC
Q 022357          241 Y-PKFCVNCVCPGFVKTDINFHAGI------------LSVEEGAESPVKLALLPDGGPTGRFFLRKEE-APF  298 (298)
Q Consensus       241 ~-~~i~vn~v~PG~v~t~~~~~~~~------------~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~-a~~  298 (298)
                      + ++|+||+|+||+|+|++......            .........|+++..+|++.+....|++++. ++|
T Consensus       174 l~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~~  245 (263)
T PRK06200        174 LAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRRNSRA  245 (263)
T ss_pred             HhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhheecccccCc
Confidence            9 67999999999999997532110            0111123457888888999999999999877 654

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-35  Score=263.32  Aligned_cols=224  Identities=24%  Similarity=0.272  Sum_probs=183.9

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc---------hhhHHHHHHHHhcCCCCcceeEEEeccCcHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE---------KRGLEAVEKLKASGVDPELLLFHQLDISDLA   71 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~   71 (298)
                      |..+++|++|||||++|||+++|++|+++|++|++++|+.         +.+....+++...+..   +.++++|+++.+
T Consensus         1 m~~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~Dv~~~~   77 (286)
T PRK07791          1 MGLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGE---AVANGDDIADWD   77 (286)
T ss_pred             CCccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCc---eEEEeCCCCCHH
Confidence            7778899999999999999999999999999999998876         5666777777654433   788999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHH
Q 022357           72 SVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEAL  151 (298)
Q Consensus        72 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~  151 (298)
                      +++++++.+.+.+|++|+||||||+....                       ++.+.+.+.|++.+++|+.+++++++++
T Consensus        78 ~v~~~~~~~~~~~g~id~lv~nAG~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~  134 (286)
T PRK07791         78 GAANLVDAAVETFGGLDVLVNNAGILRDR-----------------------MIANMSEEEWDAVIAVHLKGHFATLRHA  134 (286)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCC-----------------------CcccCCHHHHHHHHHHccHHHHHHHHHH
Confidence            99999999999999999999999986432                       1223578899999999999999999999


Q ss_pred             hhhhccCC------CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhh
Q 022357          152 IPLLELSD------SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKV  225 (298)
Q Consensus       152 ~~~~~~~~------~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  225 (298)
                      +|+|+++.      .|+||++||..+..+.                                          ++...|++
T Consensus       135 ~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~------------------------------------------~~~~~Y~a  172 (286)
T PRK07791        135 AAYWRAESKAGRAVDARIINTSSGAGLQGS------------------------------------------VGQGNYSA  172 (286)
T ss_pred             HHHHHHhcccCCCCCcEEEEeCchhhCcCC------------------------------------------CCchhhHH
Confidence            99997532      3799999998876543                                          66789999


Q ss_pred             HHHHHHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCC----------C---CCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          226 SKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH----------A---GILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       226 sK~al~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~----------~---~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      ||+|+.+|+++++.|+  .+|+||+|+|| +.|++...          .   ...+|++.+...+.++.......+|.++
T Consensus       173 sKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~~~~~~~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i  251 (286)
T PRK07791        173 AKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAEMMAKPEEGEFDAMAPENVSPLVVWLGSAESRDVTGKVF  251 (286)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHHHHhcCcccccCCCCHHHHHHHHHHHhCchhcCCCCcEE
Confidence            9999999999999998  58999999999 78887421          0   1357888888888777654445555555


Q ss_pred             ccC
Q 022357          291 LRK  293 (298)
Q Consensus       291 l~~  293 (298)
                      ..+
T Consensus       252 ~vd  254 (286)
T PRK07791        252 EVE  254 (286)
T ss_pred             EEc
Confidence            443

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-35  Score=267.50  Aligned_cols=214  Identities=27%  Similarity=0.374  Sum_probs=186.2

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+|++||||||+|||++++++|+++|++|++++|+++++++..++++..+..   +.++++|+++.++++++++.+
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~---~~~~~~Dv~d~~~v~~~~~~~   78 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAE---VLVVPTDVTDADQVKALATQA   78 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEeeCCCHHHHHHHHHHH
Confidence            45678899999999999999999999999999999999999888888888765543   788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|++|||||+....                       ++.+.+.+.+++.+++|+.++++++++++|.|++++.
T Consensus        79 ~~~~g~iD~lVnnAG~~~~~-----------------------~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~  135 (330)
T PRK06139         79 ASFGGRIDVWVNNVGVGAVG-----------------------RFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGH  135 (330)
T ss_pred             HHhcCCCCEEEECCCcCCCC-----------------------CcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCC
Confidence            99889999999999986433                       2234578889999999999999999999999988777


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|+.+|+++|+.|
T Consensus       136 g~iV~isS~~~~~~~------------------------------------------p~~~~Y~asKaal~~~~~sL~~E  173 (330)
T PRK06139        136 GIFINMISLGGFAAQ------------------------------------------PYAAAYSASKFGLRGFSEALRGE  173 (330)
T ss_pred             CEEEEEcChhhcCCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHH
Confidence            999999998776443                                          66789999999999999999999


Q ss_pred             C---CCcEEEEeeCCeeecCCCCC------------CCCCChhhhhhhhhhhhccCC
Q 022357          241 Y---PKFCVNCVCPGFVKTDINFH------------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       241 ~---~~i~vn~v~PG~v~t~~~~~------------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      +   ++|+|++|+||+|+|++...            .+..+|++.++.++..+..++
T Consensus       174 l~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        174 LADHPDIHVCDVYPAFMDTPGFRHGANYTGRRLTPPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             hCCCCCeEEEEEecCCccCcccccccccccccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence            8   37999999999999997532            134689999999988887655

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-36  Score=264.51  Aligned_cols=229  Identities=28%  Similarity=0.353  Sum_probs=183.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++...... ..+.++++|+++.++++++++++.+
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPG-ARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCC-ceEEEEEecCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999988888877777654321 2378899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||.....                       ++.+.+.+.|++.+++|+.+++.+++.++|.|++++.|+
T Consensus        84 ~~g~id~li~~Ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~  140 (265)
T PRK07062         84 RFGGVDMLVNNAGQGRVS-----------------------TFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAAS  140 (265)
T ss_pred             hcCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcE
Confidence            999999999999975432                       122357788999999999999999999999998877799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|+++|+|+.+|+++++.|+ 
T Consensus       141 iv~isS~~~~~~~------------------------------------------~~~~~y~asKaal~~~~~~la~e~~  178 (265)
T PRK07062        141 IVCVNSLLALQPE------------------------------------------PHMVATSAARAGLLNLVKSLATELA  178 (265)
T ss_pred             EEEeccccccCCC------------------------------------------CCchHhHHHHHHHHHHHHHHHHHhh
Confidence            9999998876543                                          567889999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC------CCCChhh-------hhhhhhhhhccCCCCCcceEeccCccCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA------GILSVEE-------GAESPVKLALLPDGGPTGRFFLRKEEAP  297 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~------~~~~~~~-------~a~~~~~~~~~~~~~~~~~~~l~~~~a~  297 (298)
                       .||+||+|+||+|+|++....      .....++       ....|+++...|++.+....|+.++.+.
T Consensus       179 ~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~~~~  248 (265)
T PRK07062        179 PKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLASPLSS  248 (265)
T ss_pred             hcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhCchhc
Confidence             589999999999999875321      0000010       1223555555666666666666665443

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=9e-36  Score=269.37  Aligned_cols=229  Identities=19%  Similarity=0.204  Sum_probs=175.1

Q ss_pred             cCCCcEEEEeCC--CCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhc----------CCCCcceeEEEecc--C
Q 022357            3 EATKKYAVVTGS--NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS----------GVDPELLLFHQLDI--S   68 (298)
Q Consensus         3 ~~~~~~vlITGa--s~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~----------~~~~~~~~~~~~Dl--s   68 (298)
                      +++||++|||||  |+|||+++|+.|+++|++|++ +|+..+++++...+...          +........+++|+  +
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   84 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD   84 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence            378999999999  899999999999999999998 88888888877766531          10111246788999  3


Q ss_pred             c------------------HHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhH
Q 022357           69 D------------------LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTY  130 (298)
Q Consensus        69 ~------------------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (298)
                      +                  .++++++++++.+++|++|+||||||.....                     ..++.+.+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~---------------------~~~~~~~~~  143 (303)
T PLN02730         85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEV---------------------TKPLLETSR  143 (303)
T ss_pred             ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccC---------------------CCChhhCCH
Confidence            3                  3489999999999999999999999864210                     113345688


Q ss_pred             HHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhh
Q 022357          131 ELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGE  210 (298)
Q Consensus       131 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (298)
                      ++|++.+++|+.+++.++++++|.|+++  |+||++||..+..+.                                   
T Consensus       144 e~~~~~~~vN~~~~~~l~~~~~p~m~~~--G~II~isS~a~~~~~-----------------------------------  186 (303)
T PLN02730        144 KGYLAAISASSYSFVSLLQHFGPIMNPG--GASISLTYIASERII-----------------------------------  186 (303)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHhcC--CEEEEEechhhcCCC-----------------------------------
Confidence            9999999999999999999999999753  899999998775432                                   


Q ss_pred             hhcCCCCCCC-chhhhHHHHHHHHHHHHHHhC-C--CcEEEEeeCCeeecCCCCCCCCCChhh----hhhhhhhhhccCC
Q 022357          211 IANRGWCPHS-SAYKVSKAVINAYTRILAKRY-P--KFCVNCVCPGFVKTDINFHAGILSVEE----GAESPVKLALLPD  282 (298)
Q Consensus       211 ~~~~~~~~~~-~~Y~~sK~al~~l~~~la~e~-~--~i~vn~v~PG~v~t~~~~~~~~~~~~~----~a~~~~~~~~~~~  282 (298)
                             +.+ ..|++||+|+.+|+++|+.|+ +  +||||+|+||+|+|++....+. .++.    ....|+.+...|+
T Consensus       187 -------p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~-~~~~~~~~~~~~pl~r~~~pe  258 (303)
T PLN02730        187 -------PGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGF-IDDMIEYSYANAPLQKELTAD  258 (303)
T ss_pred             -------CCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccc-cHHHHHHHHhcCCCCCCcCHH
Confidence                   434 479999999999999999998 3  7999999999999998643211 1111    1223445555666


Q ss_pred             CCCcceEeccCccCCC
Q 022357          283 GGPTGRFFLRKEEAPF  298 (298)
Q Consensus       283 ~~~~~~~~l~~~~a~~  298 (298)
                      +.+....|++++.++|
T Consensus       259 evA~~~~fLaS~~a~~  274 (303)
T PLN02730        259 EVGNAAAFLASPLASA  274 (303)
T ss_pred             HHHHHHHHHhCccccC
Confidence            6666666666665543

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-35  Score=261.12  Aligned_cols=187  Identities=26%  Similarity=0.287  Sum_probs=162.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |.++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++   +.   .+.++++|+++.++++++++.+
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dl~~~~~~~~~~~~~   74 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GE---RARFIATDITDDAAIERAVATV   74 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC---eeEEEEecCCCHHHHHHHHHHH
Confidence            77889999999999999999999999999999999999987666665554   11   3788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||.......                        +.+.+.|++.+++|+.+++.+++.++|.|+ ++.
T Consensus        75 ~~~~g~id~lv~~ag~~~~~~~------------------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~  129 (261)
T PRK08265         75 VARFGRVDILVNLACTYLDDGL------------------------ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGG  129 (261)
T ss_pred             HHHhCCCCEEEECCCCCCCCcC------------------------cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCC
Confidence            9999999999999997532210                        136788999999999999999999999997 566


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|+++|+|+..|+++++.+
T Consensus       130 g~ii~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e  167 (261)
T PRK08265        130 GAIVNFTSISAKFAQ------------------------------------------TGRWLYPASKAAIRQLTRSMAMD  167 (261)
T ss_pred             cEEEEECchhhccCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHH
Confidence            899999998776543                                          55778999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      +  .+|+||+|+||+++|++..
T Consensus       168 ~~~~gi~vn~v~PG~~~t~~~~  189 (261)
T PRK08265        168 LAPDGIRVNSVSPGWTWSRVMD  189 (261)
T ss_pred             hcccCEEEEEEccCCccChhhh
Confidence            8  4899999999999999753

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=2e-35  Score=261.94  Aligned_cols=181  Identities=27%  Similarity=0.359  Sum_probs=159.7

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+..+..              .+.+++||++++++++++++++
T Consensus         1 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~--------------~~~~~~~D~~~~~~i~~~~~~~   66 (258)
T PRK06398          1 DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN--------------DVDYFKVDVSNKEQVIKGIDYV   66 (258)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC--------------ceEEEEccCCCHHHHHHHHHHH
Confidence            78899999999999999999999999999999999999864311              2788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .++++++|+||||||.....                       ++.+.+.++|++.+++|+.+++.++++++|.|++++.
T Consensus        67 ~~~~~~id~li~~Ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  123 (258)
T PRK06398         67 ISKYGRIDILVNNAGIESYG-----------------------AIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDK  123 (258)
T ss_pred             HHHcCCCCEEEECCCCCCCC-----------------------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence            99999999999999985432                       2234588999999999999999999999999987777


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|+++|+++++.|
T Consensus       124 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sKaal~~~~~~la~e  161 (258)
T PRK06398        124 GVIINIASVQSFAVT------------------------------------------RNAAAYVTSKHAVLGLTRSIAVD  161 (258)
T ss_pred             eEEEEeCcchhccCC------------------------------------------CCCchhhhhHHHHHHHHHHHHHH
Confidence            999999998765432                                          56789999999999999999999


Q ss_pred             C-CCcEEEEeeCCeeecCCCC
Q 022357          241 Y-PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       241 ~-~~i~vn~v~PG~v~t~~~~  260 (298)
                      + ++|+||+|+||+++|++..
T Consensus       162 ~~~~i~vn~i~PG~v~T~~~~  182 (258)
T PRK06398        162 YAPTIRCVAVCPGSIRTPLLE  182 (258)
T ss_pred             hCCCCEEEEEecCCccchHHh
Confidence            8 4699999999999999753

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-35  Score=258.93  Aligned_cols=228  Identities=21%  Similarity=0.279  Sum_probs=182.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||++|||++++++|+++|++|++++|+.+++.+..+++...+.   .+.++++|+++.++++++++.+.+
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~   82 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGI---KAHAAPFNVTHKQEVEAAIEHIEK   82 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC---eEEEEecCCCCHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999998888888777775433   278889999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|++|||||.....+                       +.+.+.++|++.+++|+.+++.+++++.+.|++++.++
T Consensus        83 ~~~~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  139 (254)
T PRK08085         83 DIGPIDVLINNAGIQRRHP-----------------------FTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGK  139 (254)
T ss_pred             hcCCCCEEEECCCcCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcE
Confidence            9999999999999764321                       22357788999999999999999999999998777799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|+++|+|+++++++++.++ 
T Consensus       140 iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~  177 (254)
T PRK08085        140 IINICSMQSELGR------------------------------------------DTITPYAASKGAVKMLTRGMCVELA  177 (254)
T ss_pred             EEEEccchhccCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHH
Confidence            9999997765432                                          556789999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCCC---CChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAGI---LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                       .||+||+|+||+++|++......   .........|+.+...|++.+....|+.++.++|
T Consensus       178 ~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~  238 (254)
T PRK08085        178 RHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDF  238 (254)
T ss_pred             hhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence             48999999999999997643210   0011112335555555666666666666655443

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-34  Score=256.51  Aligned_cols=212  Identities=26%  Similarity=0.323  Sum_probs=182.0

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++..+..   +.++++|+++.++++++++.+
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~---~~~~~~Dv~d~~~v~~~~~~~   77 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFD---VHGVMCDVRHREEVTHLADEA   77 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---EEEEeCCCCCHHHHHHHHHHH
Confidence            78899999999999999999999999999999999999988888887777654432   788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-  159 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-  159 (298)
                      .+.+|++|+||||||+.....                       +.+.+.+.+++.+++|+.+++.++++++|.|.+++ 
T Consensus        78 ~~~~g~id~li~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~  134 (275)
T PRK05876         78 FRLLGHVDVVFSNAGIVVGGP-----------------------IVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGT  134 (275)
T ss_pred             HHHcCCCCEEEECCCcCCCCC-----------------------cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999864332                       22357889999999999999999999999997654 


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          ++...|++||+|+.+|+++|+.
T Consensus       135 ~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~l~~  172 (275)
T PRK05876        135 GGHVVFTASFAGLVPN------------------------------------------AGLGAYGVAKYGVVGLAETLAR  172 (275)
T ss_pred             CCEEEEeCChhhccCC------------------------------------------CCCchHHHHHHHHHHHHHHHHH
Confidence            6899999998776543                                          6678999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCC------------------------CCCChhhhhhhhhhhhcc
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHA------------------------GILSVEEGAESPVKLALL  280 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~------------------------~~~~~~~~a~~~~~~~~~  280 (298)
                      |+  .+|+|++|+||+++|++....                        ..+++++.++..+..+..
T Consensus       173 e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~  239 (275)
T PRK05876        173 EVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILA  239 (275)
T ss_pred             HhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHc
Confidence            98  589999999999999875321                        136788888888777654

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-35  Score=258.09  Aligned_cols=189  Identities=25%  Similarity=0.325  Sum_probs=162.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||++|||++++++|+++|++|++++|+ ++.++..+.+...+.   .+.++++|+++.++++++++++.+
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~   87 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGR---KVTFVQVDLTKPESAEKVVKEALE   87 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCC---ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999998 555555555554433   288999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|++|||||.....+                       +.+.+.+.|++.+++|+.+++.++++++|.|++++.|+
T Consensus        88 ~~g~id~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~  144 (258)
T PRK06935         88 EFGKIDILVNNAGTIRRAP-----------------------LLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGK  144 (258)
T ss_pred             HcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeE
Confidence            9999999999999764321                       12346788999999999999999999999998877799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.++ 
T Consensus       145 iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~  182 (258)
T PRK06935        145 IINIASMLSFQGG------------------------------------------KFVPAYTASKHGVAGLTKAFANELA  182 (258)
T ss_pred             EEEECCHHhccCC------------------------------------------CCchhhHHHHHHHHHHHHHHHHHhh
Confidence            9999998766443                                          556789999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~  260 (298)
                       .||+||.|+||+|+|++..
T Consensus       183 ~~gi~v~~i~PG~v~t~~~~  202 (258)
T PRK06935        183 AYNIQVNAIAPGYIKTANTA  202 (258)
T ss_pred             hhCeEEEEEEeccccccchh
Confidence             4899999999999998753

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.8e-35  Score=260.08  Aligned_cols=190  Identities=24%  Similarity=0.284  Sum_probs=153.9

Q ss_pred             CCcCCCcEEEEeCC--CCchhHHHHHHHHHCCCEEEEEecCc--hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHH
Q 022357            1 MAEATKKYAVVTGS--NKGIGFETVRQLASKGITVVLTARDE--KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSL   76 (298)
Q Consensus         1 m~~~~~~~vlITGa--s~gIG~a~a~~La~~G~~Vii~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~   76 (298)
                      |..+.+|+++||||  ++|||+++|++|+++|++|++++|+.  +.+++..+++.   .   .+.++++|+++.++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~---~---~~~~~~~Dv~~~~~i~~~   75 (256)
T PRK07889          2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP---E---PAPVLELDVTNEEHLASL   75 (256)
T ss_pred             cccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC---C---CCcEEeCCCCCHHHHHHH
Confidence            44478999999999  89999999999999999999999874  22333333332   1   267899999999999999


Q ss_pred             HHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhc
Q 022357           77 ADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE  156 (298)
Q Consensus        77 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~  156 (298)
                      ++.+.++++++|++|||||+......                   ..++.+.+.++|++.+++|+.+++++++.++|.|+
T Consensus        76 ~~~~~~~~g~iD~li~nAG~~~~~~~-------------------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~  136 (256)
T PRK07889         76 ADRVREHVDGLDGVVHSIGFAPQSAL-------------------GGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMN  136 (256)
T ss_pred             HHHHHHHcCCCcEEEEcccccccccc-------------------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcc
Confidence            99999999999999999997632100                   01123357788999999999999999999999997


Q ss_pred             cCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHH
Q 022357          157 LSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI  236 (298)
Q Consensus       157 ~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~  236 (298)
                      +  .|+||++||... .+                                          .+.+..|++||+|+.+|+++
T Consensus       137 ~--~g~Iv~is~~~~-~~------------------------------------------~~~~~~Y~asKaal~~l~~~  171 (256)
T PRK07889        137 E--GGSIVGLDFDAT-VA------------------------------------------WPAYDWMGVAKAALESTNRY  171 (256)
T ss_pred             c--CceEEEEeeccc-cc------------------------------------------CCccchhHHHHHHHHHHHHH
Confidence            3  489999986421 11                                          15577899999999999999


Q ss_pred             HHHhC--CCcEEEEeeCCeeecCCCC
Q 022357          237 LAKRY--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       237 la~e~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      |+.|+  .|||||+|+||+|+|++..
T Consensus       172 la~el~~~gIrvn~v~PG~v~T~~~~  197 (256)
T PRK07889        172 LARDLGPRGIRVNLVAAGPIRTLAAK  197 (256)
T ss_pred             HHHHhhhcCeEEEeeccCcccChhhh
Confidence            99999  5899999999999998753

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.3e-34  Score=259.15  Aligned_cols=243  Identities=24%  Similarity=0.232  Sum_probs=188.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+...+++...+.   ++.++++|+++.++++.+++.+.+
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~v~~~~~~~~~   83 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGG---EALAVKADVLDKESLEQARQQILE   83 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999998877777777765433   388999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      +++++|++|||||...+....+.        ........++++.+.+.+.|++.+++|+.+++.+++.++|.|++++.|+
T Consensus        84 ~~g~id~li~~ag~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~  155 (278)
T PRK08277         84 DFGPCDILINGAGGNHPKATTDN--------EFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGN  155 (278)
T ss_pred             HcCCCCEEEECCCCCCccccccc--------ccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcE
Confidence            99999999999997543211000        0000011223455678899999999999999999999999998777799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.++ 
T Consensus       156 ii~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~l~~~la~e~~  193 (278)
T PRK08277        156 IINISSMNAFTPL------------------------------------------TKVPAYSAAKAAISNFTQWLAVHFA  193 (278)
T ss_pred             EEEEccchhcCCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhC
Confidence            9999998776443                                          567889999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCCC----CCh----hhhhhhhhhhhccCCCCCcceEeccCc-cCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAGI----LSV----EEGAESPVKLALLPDGGPTGRFFLRKE-EAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~~----~~~----~~~a~~~~~~~~~~~~~~~~~~~l~~~-~a~~  298 (298)
                       .+|+||+|+||+|+|++......    ...    ......|+.+...|++.+....|+.++ .+.|
T Consensus       194 ~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~  260 (278)
T PRK08277        194 KVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTLLWLADEKASSF  260 (278)
T ss_pred             ccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCccccCC
Confidence             48999999999999997532110    000    111234566666677777777777776 5543

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=254.83  Aligned_cols=224  Identities=29%  Similarity=0.325  Sum_probs=182.4

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +++.+|+++||||+||||++++++|+++|++|++++|+.++++...++++..+.+   +.++++|+++.++++++++.+.
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~i~~~~~~~~   79 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGE---ALFVACDVTRDAEVKALVEQTI   79 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCc---eEEEEcCCCCHHHHHHHHHHHH
Confidence            3577899999999999999999999999999999999988877777777655433   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +.++++|++|||||......                      ++.+.+.+.+++.+++|+.+++.++++++|.|.+++.+
T Consensus        80 ~~~g~id~li~~ag~~~~~~----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  137 (253)
T PRK06172         80 AAYGRLDYAFNNAGIEIEQG----------------------RLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGG  137 (253)
T ss_pred             HHhCCCCEEEECCCCCCCCC----------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc
Confidence            99999999999999754321                      11235778899999999999999999999999877778


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|+++|+++++.++
T Consensus       138 ~ii~~sS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~  175 (253)
T PRK06172        138 AIVNTASVAGLGAA------------------------------------------PKMSIYAASKHAVIGLTKSAAIEY  175 (253)
T ss_pred             EEEEECchhhccCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHh
Confidence            99999998776443                                          567889999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCC------------------CCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAG------------------ILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~------------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                        .+|+||+|+||+|+|++.....                  ..+|++.+...+.++.......+|.++..
T Consensus       176 ~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~  246 (253)
T PRK06172        176 AKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHALMV  246 (253)
T ss_pred             cccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcCCcEEEE
Confidence              4899999999999999864321                  12455555555555554444445554443

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=3.5e-34  Score=254.35  Aligned_cols=226  Identities=19%  Similarity=0.190  Sum_probs=177.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.   .+.   .+.++++|+++.++++++++++.+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~---~~~~~~~D~~~~~~~~~~~~~~~~   75 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGD---AVVGVEGDVRSLDDHKEAVARCVA   75 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCC---ceEEEEeccCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999987665554332   121   278899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      +++++|+||||||...........           .       .+...+.|++.+++|+.+++.++++++|.|.+++ |+
T Consensus        76 ~~g~id~li~~Ag~~~~~~~~~~~-----------~-------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~  136 (262)
T TIGR03325        76 AFGKIDCLIPNAGIWDYSTALVDI-----------P-------DDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GS  136 (262)
T ss_pred             HhCCCCEEEECCCCCccCCccccC-----------C-------chhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CC
Confidence            999999999999975321110000           0       0012357889999999999999999999997654 89


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||+++|..+..+.                                          +....|++||+|+++|+++++.++ 
T Consensus       137 iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~l~~~la~e~~  174 (262)
T TIGR03325       137 VIFTISNAGFYPN------------------------------------------GGGPLYTAAKHAVVGLVKELAFELA  174 (262)
T ss_pred             EEEEeccceecCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHhhc
Confidence            9999998776432                                          456789999999999999999999 


Q ss_pred             CCcEEEEeeCCeeecCCCCCCC---------CCChhhh--hhhhhhhhccCCCCCcceEeccCcc
Q 022357          242 PKFCVNCVCPGFVKTDINFHAG---------ILSVEEG--AESPVKLALLPDGGPTGRFFLRKEE  295 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~~---------~~~~~~~--a~~~~~~~~~~~~~~~~~~~l~~~~  295 (298)
                      +.|+||+|+||+++|++.....         ....++.  ...|+++..+|++.+....|+.++.
T Consensus       175 ~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~  239 (262)
T TIGR03325       175 PYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRG  239 (262)
T ss_pred             cCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecCC
Confidence            5699999999999999864211         0011221  2357888888999999999998863

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-33  Score=248.95  Aligned_cols=226  Identities=22%  Similarity=0.252  Sum_probs=185.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+++|+++||||++|||++++++|+++|++|++++|+.++++...+++...+..   +.++++|+++.++++++++.+
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~   79 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGK---AEALACHIGEMEQIDALFAHI   79 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---EEEEEcCCCCHHHHHHHHHHH
Confidence            34678899999999999999999999999999999999988888877777655433   778999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|++|||||.....                      .++.+.+.+.+++.+++|+.+++.++++++|+|++++.
T Consensus        80 ~~~~~~id~li~~ag~~~~~----------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  137 (252)
T PRK07035         80 RERHGRLDILVNNAAANPYF----------------------GHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGG  137 (252)
T ss_pred             HHHcCCCCEEEECCCcCCCC----------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC
Confidence            99999999999999965321                      11223577889999999999999999999999987777


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++|+++||..+..+.                                          ++...|++||+|+++|+++++.+
T Consensus       138 ~~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~al~~~~~~l~~e  175 (252)
T PRK07035        138 GSIVNVASVNGVSPG------------------------------------------DFQGIYSITKAAVISMTKAFAKE  175 (252)
T ss_pred             cEEEEECchhhcCCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHH
Confidence            999999997765432                                          56788999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +  .||+||+|+||+|+|++....                 ...+|++.++..+..+.......+|..+..+
T Consensus       176 ~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~d  247 (252)
T PRK07035        176 CAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECLNVD  247 (252)
T ss_pred             HhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccCCEEEeC
Confidence            8  489999999999999875321                 1346777777777766655555555555443

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.7e-34  Score=257.41  Aligned_cols=239  Identities=36%  Similarity=0.474  Sum_probs=195.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+++++||||++|||+++|++|+.+|++|++++|+.++.++.+++++. ...++.+.+.+||+++.++|+++++.+.+
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~-~~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQK-GKANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh-cCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999999999999987 33445689999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|++|||||++..+.                         ..+.|.++..+.+|++|+|+|++.++|.|+.+..+|
T Consensus       111 ~~~~ldvLInNAGV~~~~~-------------------------~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~R  165 (314)
T KOG1208|consen  111 KEGPLDVLINNAGVMAPPF-------------------------SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSR  165 (314)
T ss_pred             cCCCccEEEeCcccccCCc-------------------------ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCC
Confidence            9999999999999987652                         135578889999999999999999999999877799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      ||++||..+ ...+.      +++.   ..        ..           ...+....+|+.||.|+..+++.|+++++
T Consensus       166 IV~vsS~~~-~~~~~------~~~l---~~--------~~-----------~~~~~~~~~Y~~SKla~~l~~~eL~k~l~  216 (314)
T KOG1208|consen  166 IVNVSSILG-GGKID------LKDL---SG--------EK-----------AKLYSSDAAYALSKLANVLLANELAKRLK  216 (314)
T ss_pred             EEEEcCccc-cCccc------hhhc---cc--------hh-----------ccCccchhHHHHhHHHHHHHHHHHHHHhh
Confidence            999999887 21100      0000   00        00           01123345799999999999999999995


Q ss_pred             -CcEEEEeeCCeeecC-CCCCC-------------CCCChhhhhhhhhhhhccCC-CCCcceEeccCccC
Q 022357          243 -KFCVNCVCPGFVKTD-INFHA-------------GILSVEEGAESPVKLALLPD-GGPTGRFFLRKEEA  296 (298)
Q Consensus       243 -~i~vn~v~PG~v~t~-~~~~~-------------~~~~~~~~a~~~~~~~~~~~-~~~~~~~~l~~~~a  296 (298)
                       ||.+++++||.|.|+ +.+..             -..+++++|++.+..+.+|+ +..+|.+|..+.+.
T Consensus       217 ~~V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~~~~~ks~~~ga~t~~~~a~~p~~~~~sg~y~~d~~~~  286 (314)
T KOG1208|consen  217 KGVTTYSVHPGVVKTTGLSRVNLLLRLLAKKLSWPLTKSPEQGAATTCYAALSPELEGVSGKYFEDCAIA  286 (314)
T ss_pred             cCceEEEECCCcccccceecchHHHHHHHHHHHHHhccCHHHHhhheehhccCccccCcccccccccccc
Confidence             999999999999999 44411             12479999999999999886 55677777666543

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=256.90  Aligned_cols=224  Identities=24%  Similarity=0.194  Sum_probs=182.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      ++|||||++|||+++|++|+++|++|++++|+++.+.+..++++..+    .+.++++|+++.++++++++.+.++++++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i   77 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG----EVYAVKADLSDKDDLKNLVKEAWELLGGI   77 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC----CceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            69999999999999999999999999999999888888888876543    27889999999999999999999999999


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhc-cCCCCcEEEE
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE-LSDSPRLVNL  166 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~g~iv~v  166 (298)
                      |+||||||......                     ..+.+.+.++|.+.+.+|+.+++.+++.++|.|. +++.|+||++
T Consensus        78 d~li~naG~~~~~~---------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~i  136 (259)
T PRK08340         78 DALVWNAGNVRCEP---------------------CMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYL  136 (259)
T ss_pred             CEEEECCCCCCCCc---------------------cccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            99999999753211                     0112346788889999999999999999999886 3456899999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CCc
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKF  244 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~i  244 (298)
                      ||..+..+.                                          +....|++||+|+.+|+|+++.++  .||
T Consensus       137 sS~~~~~~~------------------------------------------~~~~~y~~sKaa~~~~~~~la~e~~~~gI  174 (259)
T PRK08340        137 SSVSVKEPM------------------------------------------PPLVLADVTRAGLVQLAKGVSRTYGGKGI  174 (259)
T ss_pred             eCcccCCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence            998765432                                          557789999999999999999999  489


Q ss_pred             EEEEeeCCeeecCCCCCC-------CCCChh------hhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          245 CVNCVCPGFVKTDINFHA-------GILSVE------EGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~~-------~~~~~~------~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +||+|+||+++|++.+..       ...+++      ...+.|+++...|++.+....|++++.++|
T Consensus       175 ~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~~  241 (259)
T PRK08340        175 RAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENAEY  241 (259)
T ss_pred             EEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCccccc
Confidence            999999999999986321       001111      123457777788888888888888887765

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-34  Score=252.75  Aligned_cols=187  Identities=29%  Similarity=0.407  Sum_probs=156.6

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +++|+++||||++|||++++++|+++|++|++++ |+.+...+...++...+..   ...+++|+++.+++..+++.+.+
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   78 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGS---AFSIGANLESLHGVEALYSSLDN   78 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCc---eEEEecccCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999875 5556666666677654433   77889999999999999888765


Q ss_pred             h----cC--CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhc
Q 022357           83 Q----FG--KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE  156 (298)
Q Consensus        83 ~----~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~  156 (298)
                      .    ++  ++|+||||||.....+                       +.+.+.+.|++.+++|+.+++.++++++|.|+
T Consensus        79 ~~~~~~g~~~id~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~  135 (252)
T PRK12747         79 ELQNRTGSTKFDILINNAGIGPGAF-----------------------IEETTEQFFDRMVSVNAKAPFFIIQQALSRLR  135 (252)
T ss_pred             HhhhhcCCCCCCEEEECCCcCCCCC-----------------------cccCCHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence            3    34  8999999999753321                       12357788999999999999999999999996


Q ss_pred             cCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHH
Q 022357          157 LSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI  236 (298)
Q Consensus       157 ~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~  236 (298)
                      +  .|+||++||..+..+.                                          +....|++||+|+++|+++
T Consensus       136 ~--~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~  171 (252)
T PRK12747        136 D--NSRIINISSAATRISL------------------------------------------PDFIAYSMTKGAINTMTFT  171 (252)
T ss_pred             c--CCeEEEECCcccccCC------------------------------------------CCchhHHHHHHHHHHHHHH
Confidence            4  3899999998876443                                          5578899999999999999


Q ss_pred             HHHhC--CCcEEEEeeCCeeecCCCC
Q 022357          237 LAKRY--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       237 la~e~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      ++.++  .+|+||+|+||+|+|++..
T Consensus       172 la~e~~~~girvn~v~Pg~v~t~~~~  197 (252)
T PRK12747        172 LAKQLGARGITVNAILPGFIKTDMNA  197 (252)
T ss_pred             HHHHHhHcCCEEEEEecCCccCchhh
Confidence            99998  5899999999999999864

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.6e-33  Score=248.11  Aligned_cols=208  Identities=19%  Similarity=0.185  Sum_probs=175.4

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++++||||++|||+++|++|+ +|++|++++|+++++++..++++..+..  .+.+++||++|.++++++++.+.+.+|+
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   77 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGAT--SVHVLSFDAQDLDTHRELVKQTQELAGE   77 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCC--ceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence            479999999999999999999 5999999999999888888888765432  2778999999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-CCcEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVN  165 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~  165 (298)
                      +|++|||||.......                       .+.+.+.+.+.+++|+.+++.+++.++|.|.+++ .|+||+
T Consensus        78 id~lv~nag~~~~~~~-----------------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~  134 (246)
T PRK05599         78 ISLAVVAFGILGDQER-----------------------AETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVA  134 (246)
T ss_pred             CCEEEEecCcCCCchh-----------------------hhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEE
Confidence            9999999998643211                       1134556678889999999999999999997654 589999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK  243 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~  243 (298)
                      +||..+..+.                                          ++...|++||+|+.+|+++++.|+  .+
T Consensus       135 isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~el~~~~  172 (246)
T PRK05599        135 FSSIAGWRAR------------------------------------------RANYVYGSTKAGLDAFCQGLADSLHGSH  172 (246)
T ss_pred             EeccccccCC------------------------------------------cCCcchhhHHHHHHHHHHHHHHHhcCCC
Confidence            9998876543                                          567889999999999999999998  58


Q ss_pred             cEEEEeeCCeeecCCCCCC---C-CCChhhhhhhhhhhhccCC
Q 022357          244 FCVNCVCPGFVKTDINFHA---G-ILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~~~---~-~~~~~~~a~~~~~~~~~~~  282 (298)
                      |+||+|+||+|+|++....   + ..+|++.++..+..+....
T Consensus       173 I~v~~v~PG~v~T~~~~~~~~~~~~~~pe~~a~~~~~~~~~~~  215 (246)
T PRK05599        173 VRLIIARPGFVIGSMTTGMKPAPMSVYPRDVAAAVVSAITSSK  215 (246)
T ss_pred             ceEEEecCCcccchhhcCCCCCCCCCCHHHHHHHHHHHHhcCC
Confidence            9999999999999975432   1 2589999999999887643

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-33  Score=256.56  Aligned_cols=236  Identities=26%  Similarity=0.326  Sum_probs=186.4

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |.++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++...... ..+.++++|+++.++++++++.+
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~-~~v~~~~~Dl~d~~sv~~~~~~~   87 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPD-AKLSLRALDLSSLASVAALGEQL   87 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCC-CceEEEEecCCCHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999998888888887654321 23889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||......                        ...+.+.++..+++|++|++.+++.++|.|+++ .
T Consensus        88 ~~~~~~iD~li~nAG~~~~~~------------------------~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~  142 (313)
T PRK05854         88 RAEGRPIHLLINNAGVMTPPE------------------------RQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-R  142 (313)
T ss_pred             HHhCCCccEEEECCccccCCc------------------------cccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-C
Confidence            999999999999999864310                        013667888999999999999999999999765 5


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+..+....      .+                        +.....++....|+.||+|+.+|++.|+.+
T Consensus       143 ~riv~vsS~~~~~~~~~~------~~------------------------~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~  192 (313)
T PRK05854        143 ARVTSQSSIAARRGAINW------DD------------------------LNWERSYAGMRAYSQSKIAVGLFALELDRR  192 (313)
T ss_pred             CCeEEEechhhcCCCcCc------cc------------------------ccccccCcchhhhHHHHHHHHHHHHHHHHH
Confidence            899999998876442110      00                        001112345678999999999999999986


Q ss_pred             C----CCcEEEEeeCCeeecCCCCCC-----------------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          241 Y----PKFCVNCVCPGFVKTDINFHA-----------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       241 ~----~~i~vn~v~PG~v~t~~~~~~-----------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +    .+|+||+|+||+|.|++....                       ...++++++.+.+.++..|+.. .|.+|..+
T Consensus       193 ~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~l~~a~~~~~~-~g~~~~~~  271 (313)
T PRK05854        193 SRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVESAILPALYAATSPDAE-GGAFYGPR  271 (313)
T ss_pred             hhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHHHHHHHhhheeeCCCCC-CCcEECCC
Confidence            4    479999999999999975321                       1236788888888888776543 46676654

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=2.7e-34  Score=259.62  Aligned_cols=227  Identities=25%  Similarity=0.290  Sum_probs=178.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch--hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .+++|++|||||++|||++++++|+++|++|++++|+..  ..+++.+.+...+.   .+.++++|+++.+++.++++++
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~  122 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGR---KAVLLPGDLSDEKFARSLVHEA  122 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCC---eEEEEEccCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999887543  34444444444332   2778999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|++|||||......                      ++.+.+.++|++.+++|+.+++.++++++|.|++  .
T Consensus       123 ~~~~g~id~lv~~Ag~~~~~~----------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~  178 (294)
T PRK07985        123 HKALGGLDIMALVAGKQVAIP----------------------DIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--G  178 (294)
T ss_pred             HHHhCCCCEEEECCCCCcCCC----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--C
Confidence            999999999999999642211                      1223578899999999999999999999999964  4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|+++|+++++.+
T Consensus       179 g~iv~iSS~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la~e  216 (294)
T PRK07985        179 ASIITTSSIQAYQPS------------------------------------------PHLLDYAATKAAILNYSRGLAKQ  216 (294)
T ss_pred             CEEEEECCchhccCC------------------------------------------CCcchhHHHHHHHHHHHHHHHHH
Confidence            899999998776432                                          55778999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCCC---CChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAGI---LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +  .||+||+|+||+|+|++......   ..+......|+++...|++++...+|++++.+.|
T Consensus       217 l~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~  279 (294)
T PRK07985        217 VAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSY  279 (294)
T ss_pred             HhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCC
Confidence            8  59999999999999997532110   0111223446666677778888888888776654

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=3.2e-34  Score=259.82  Aligned_cols=226  Identities=30%  Similarity=0.340  Sum_probs=178.5

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch--hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      ..+.+|++|||||++|||++++++|+++|++|++++++.+  ..++..+.++..+..   +.++++|+++.+++++++++
T Consensus        51 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~v~~~~~~  127 (300)
T PRK06128         51 GRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRK---AVALPGDLKDEAFCRQLVER  127 (300)
T ss_pred             cccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCe---EEEEecCCCCHHHHHHHHHH
Confidence            4467899999999999999999999999999999887643  345555666654433   78899999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+.++++|+||||||......                      ++.+.+.+.|++.+++|+.++++++++++|.|+.  
T Consensus       128 ~~~~~g~iD~lV~nAg~~~~~~----------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--  183 (300)
T PRK06128        128 AVKELGGLDILVNIAGKQTAVK----------------------DIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--  183 (300)
T ss_pred             HHHHhCCCCEEEECCcccCCCC----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--
Confidence            9999999999999999753221                      2234578899999999999999999999999963  


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      +++||++||..+..+.                                          +....|++||+|+++|+++++.
T Consensus       184 ~~~iv~~sS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~  221 (300)
T PRK06128        184 GASIINTGSIQSYQPS------------------------------------------PTLLDYASTKAAIVAFTKALAK  221 (300)
T ss_pred             CCEEEEECCccccCCC------------------------------------------CCchhHHHHHHHHHHHHHHHHH
Confidence            4799999998776443                                          5567899999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCCCCCChh----hhhhhhhhhhccCCCCCcceEeccCccCC
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHAGILSVE----EGAESPVKLALLPDGGPTGRFFLRKEEAP  297 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~----~~a~~~~~~~~~~~~~~~~~~~l~~~~a~  297 (298)
                      ++  .||+||+|+||+|+|++..... ...+    .....++.+...|++.+....|+.++.+.
T Consensus       222 el~~~gI~v~~v~PG~i~t~~~~~~~-~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~  284 (300)
T PRK06128        222 QVAEKGIRVNAVAPGPVWTPLQPSGG-QPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESS  284 (300)
T ss_pred             HhhhcCcEEEEEEECcCcCCCcccCC-CCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            98  5999999999999999853221 1111    11234556666666666666666665544

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=3.5e-34  Score=253.19  Aligned_cols=187  Identities=24%  Similarity=0.312  Sum_probs=158.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++|+++||||++|||++++++|+++|++|++++++..  .+..+.+...+.   .+..+++|+++.++++++++++.++
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGR---RFLSLTADLRKIDGIPALLERAVAE   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999998877642  344445544332   3788999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-CCc
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPR  162 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~  162 (298)
                      ++++|++|||||......                       +.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+
T Consensus        83 ~~~~D~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~  139 (253)
T PRK08993         83 FGHIDILVNNAGLIRRED-----------------------AIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGK  139 (253)
T ss_pred             hCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeE
Confidence            999999999999764321                       12357788999999999999999999999997653 589


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.++ 
T Consensus       140 iv~isS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~  177 (253)
T PRK08993        140 IINIASMLSFQGG------------------------------------------IRVPSYTASKSGVMGVTRLMANEWA  177 (253)
T ss_pred             EEEECchhhccCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhh
Confidence            9999998765432                                          456789999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~  260 (298)
                       .||+||.|+||+++|++..
T Consensus       178 ~~gi~v~~v~pG~v~T~~~~  197 (253)
T PRK08993        178 KHNINVNAIAPGYMATNNTQ  197 (253)
T ss_pred             hhCeEEEEEeeCcccCcchh
Confidence             5899999999999999754

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-34  Score=253.17  Aligned_cols=226  Identities=25%  Similarity=0.319  Sum_probs=180.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++|++|||||++|||++++++|+++|++|++++|++++..+..+.++..+.   ++.++++|+++.++++++++.+.+
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~   83 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGL---SAHALAFDVTDHDAVRAAIDAFEA   83 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCc---eEEEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998887777777765433   388899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||...+.+                       +.+.+.+.+++.+++|+.+++++++++.+.|++++.|+
T Consensus        84 ~~~~~d~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~  140 (255)
T PRK07523         84 EIGPIDILVNNAGMQFRTP-----------------------LEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGK  140 (255)
T ss_pred             hcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeE
Confidence            9999999999999864321                       22357888999999999999999999999998777799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|+++|++++.++++++.++ 
T Consensus       141 iv~iss~~~~~~~------------------------------------------~~~~~y~~sK~a~~~~~~~~a~e~~  178 (255)
T PRK07523        141 IINIASVQSALAR------------------------------------------PGIAPYTATKGAVGNLTKGMATDWA  178 (255)
T ss_pred             EEEEccchhccCC------------------------------------------CCCccHHHHHHHHHHHHHHHHHHhh
Confidence            9999997654332                                          567899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCCC---CChhhhhhhhhhhhccCCCCCcceEeccCccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAGI---LSVEEGAESPVKLALLPDGGPTGRFFLRKEEA  296 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a  296 (298)
                       .||+||+|+||+++|++......   .......+.|+.+...+++.+.+.+|+.++.+
T Consensus       179 ~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  237 (255)
T PRK07523        179 KHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDAS  237 (255)
T ss_pred             HhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence             58999999999999997542210   00111123344445555555555555555543

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-33  Score=244.92  Aligned_cols=186  Identities=19%  Similarity=0.155  Sum_probs=160.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..++++..+..   +..+++|+++.++++++++.+.+
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   78 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDN---VYSFQLKDFSQESIRHLFDAIEQ   78 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCC---eEEEEccCCCHHHHHHHHHHHHH
Confidence            568899999999999999999999999999999999998888888888765433   77899999999999999999999


Q ss_pred             hcC-CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-C
Q 022357           83 QFG-KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-S  160 (298)
Q Consensus        83 ~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~  160 (298)
                      .++ ++|++|||||......                      .+.+.+.+++.+.+++|+.+++.+++.++|+|++++ .
T Consensus        79 ~~g~~iD~li~nag~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~  136 (227)
T PRK08862         79 QFNRAPDVLVNNWTSSPLPS----------------------LFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKK  136 (227)
T ss_pred             HhCCCCCEEEECCccCCCCC----------------------ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence            999 9999999998543221                      122357788889999999999999999999998653 6


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+.                                             +....|++||+|+.+|+++|+.|
T Consensus       137 g~Iv~isS~~~~---------------------------------------------~~~~~Y~asKaal~~~~~~la~e  171 (227)
T PRK08862        137 GVIVNVISHDDH---------------------------------------------QDLTGVESSNALVSGFTHSWAKE  171 (227)
T ss_pred             ceEEEEecCCCC---------------------------------------------CCcchhHHHHHHHHHHHHHHHHH
Confidence            899999996532                                             33568999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~  258 (298)
                      +  .+||||+|+||+++|+.
T Consensus       172 l~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        172 LTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             HhhcCcEEEEEecCcCcCCC
Confidence            8  48999999999999983

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.1e-33  Score=246.24  Aligned_cols=225  Identities=24%  Similarity=0.226  Sum_probs=181.4

Q ss_pred             CCcCCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCc-----------hhhHHHHHHHHhcCCCCcceeEEEecc
Q 022357            1 MAEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDE-----------KRGLEAVEKLKASGVDPELLLFHQLDI   67 (298)
Q Consensus         1 m~~~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~Dl   67 (298)
                      |..+++|+++||||+  +|||+++|++|+++|++|++++|+.           .+..+..++++..+.   ++.++++|+
T Consensus         1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~D~   77 (256)
T PRK12859          1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGV---KVSSMELDL   77 (256)
T ss_pred             CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCC---eEEEEEcCC
Confidence            778899999999999  4999999999999999999986431           223344445554433   388999999


Q ss_pred             CcHHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHH
Q 022357           68 SDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT  147 (298)
Q Consensus        68 s~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l  147 (298)
                      ++.++++++++.+.+.+|++|++|||||.....                       ++.+.+.+.+++.+++|+.+++.+
T Consensus        78 ~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~l  134 (256)
T PRK12859         78 TQNDAPKELLNKVTEQLGYPHILVNNAAYSTNN-----------------------DFSNLTAEELDKHYMVNVRATTLL  134 (256)
T ss_pred             CCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHHhHHHHHH
Confidence            999999999999999999999999999975332                       223468889999999999999999


Q ss_pred             HHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHH
Q 022357          148 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSK  227 (298)
Q Consensus       148 ~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  227 (298)
                      .+.++|.|++++.|+||++||..+..+.                                          ++...|++||
T Consensus       135 ~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK  172 (256)
T PRK12859        135 SSQFARGFDKKSGGRIINMTSGQFQGPM------------------------------------------VGELAYAATK  172 (256)
T ss_pred             HHHHHHHHhhcCCeEEEEEcccccCCCC------------------------------------------CCchHHHHHH
Confidence            9999999987777999999998765432                                          5678999999


Q ss_pred             HHHHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCC------------CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          228 AVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       228 ~al~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +|+.+|+++++.++  .+|+||+|+||+++|++...            ....+|++.++..+.++.......+|.++..+
T Consensus       173 ~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d  252 (256)
T PRK12859        173 GAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMFPFGRIGEPKDAARLIKFLASEEAEWITGQIIHSE  252 (256)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeC
Confidence            99999999999998  58999999999999985321            11347788888877777655555666665543

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-33  Score=248.67  Aligned_cols=228  Identities=24%  Similarity=0.283  Sum_probs=187.1

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-------hHHHHHHHHhcCCCCcceeEEEeccCcHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-------GLEAVEKLKASGVDPELLLFHQLDISDLASV   73 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v   73 (298)
                      |+.+++|+++||||++|||++++++|+++|++|++++|+.+.       +.+..+++...+.   ++.++++|+++.+++
T Consensus         1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~D~~~~~~i   77 (273)
T PRK08278          1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGG---QALPLVGDVRDEDQV   77 (273)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCC---ceEEEEecCCCHHHH
Confidence            677889999999999999999999999999999999998643       3444455554433   388999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhh
Q 022357           74 SSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP  153 (298)
Q Consensus        74 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  153 (298)
                      +++++.+.+.++++|+||||||.....+                       +.+.+.+.+++.+++|+.+++.++++++|
T Consensus        78 ~~~~~~~~~~~g~id~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~vN~~~~~~l~~~~~~  134 (273)
T PRK08278         78 AAAVAKAVERFGGIDICVNNASAINLTG-----------------------TEDTPMKRFDLMQQINVRGTFLVSQACLP  134 (273)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCcCCCC-----------------------cccCCHHHHHHHHHHhchHHHHHHHHHHH
Confidence            9999999999999999999999764331                       12357788999999999999999999999


Q ss_pred             hhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHH
Q 022357          154 LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAY  233 (298)
Q Consensus       154 ~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l  233 (298)
                      +|+++..|+|+++||..+..+                                        .++++...|++||+|++.|
T Consensus       135 ~~~~~~~g~iv~iss~~~~~~----------------------------------------~~~~~~~~Y~~sK~a~~~~  174 (273)
T PRK08278        135 HLKKSENPHILTLSPPLNLDP----------------------------------------KWFAPHTAYTMAKYGMSLC  174 (273)
T ss_pred             HHHhcCCCEEEEECCchhccc----------------------------------------cccCCcchhHHHHHHHHHH
Confidence            998877789999999654322                                        1225578999999999999


Q ss_pred             HHHHHHhC--CCcEEEEeeCC-eeecCCCCC--------CCCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          234 TRILAKRY--PKFCVNCVCPG-FVKTDINFH--------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       234 ~~~la~e~--~~i~vn~v~PG-~v~t~~~~~--------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      +++++.|+  .+|+||.|+|| +++|++...        ..+.+|++.+...+..+.......+|.++...+
T Consensus       175 ~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~~~~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~~~~  246 (273)
T PRK08278        175 TLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGGDEAMRRSRTPEIMADAAYEILSRPAREFTGNFLIDEE  246 (273)
T ss_pred             HHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccccccccccCCHHHHHHHHHHHhcCccccceeEEEeccc
Confidence            99999999  58999999999 688874332        135689999999999888777777887775433

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-33  Score=255.29  Aligned_cols=213  Identities=25%  Similarity=0.263  Sum_probs=184.2

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..+.+|+++||||++|||++++++|+++|++|++++|+++++++..+++...+..   +.++++|++|.++++++++.+.
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~---~~~v~~Dv~d~~~v~~~~~~~~   80 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGE---ALAVVADVADAEAVQAAADRAE   80 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCc---EEEEEecCCCHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999998888888888765543   8889999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ++++++|++|||||.....                       ++.+.+.+.+++.+++|+.+++++++.++|.|++++.|
T Consensus        81 ~~~g~iD~lInnAg~~~~~-----------------------~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g  137 (334)
T PRK07109         81 EELGPIDTWVNNAMVTVFG-----------------------PFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRG  137 (334)
T ss_pred             HHCCCCCEEEECCCcCCCC-----------------------chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc
Confidence            9999999999999975432                       22346889999999999999999999999999887779


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|+.+|+++++.|+
T Consensus       138 ~iV~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~l~~el  175 (334)
T PRK07109        138 AIIQVGSALAYRSI------------------------------------------PLQSAYCAAKHAIRGFTDSLRCEL  175 (334)
T ss_pred             EEEEeCChhhccCC------------------------------------------CcchHHHHHHHHHHHHHHHHHHHH
Confidence            99999998876443                                          567889999999999999999997


Q ss_pred             ----CCcEEEEeeCCeeecCCCCC------------CCCCChhhhhhhhhhhhccCC
Q 022357          242 ----PKFCVNCVCPGFVKTDINFH------------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       242 ----~~i~vn~v~PG~v~t~~~~~------------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                          .+|+|+.|+||.++|++...            .+..+|++.++..+..+..+.
T Consensus       176 ~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~i~~~~~~~~  232 (334)
T PRK07109        176 LHDGSPVSVTMVQPPAVNTPQFDWARSRLPVEPQPVPPIYQPEVVADAILYAAEHPR  232 (334)
T ss_pred             hhcCCCeEEEEEeCCCccCchhhhhhhhccccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence                36999999999999986431            124689999999998887653

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-33  Score=251.02  Aligned_cols=210  Identities=27%  Similarity=0.316  Sum_probs=175.4

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+.+|++|||||++|||++++++|+++|++|++++|+.+++++..+++.. +   ..+..+++|+++.++++++++++
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~---~~~~~~~~Dv~d~~~v~~~~~~~   79 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-D---DRVLTVVADVTDLAAMQAAAEEA   79 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-C---CcEEEEEecCCCHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999998887777776642 1   23777889999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||+....                       ++.+.+.+.|++.+++|+.+++++++.++|.|.+. .
T Consensus        80 ~~~~g~id~vI~nAG~~~~~-----------------------~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~  135 (296)
T PRK05872         80 VERFGGIDVVVANAGIASGG-----------------------SVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-R  135 (296)
T ss_pred             HHHcCCCCEEEECCCcCCCc-----------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-C
Confidence            99999999999999986432                       22335788999999999999999999999999764 4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          ++...|++||+++++|+++++.+
T Consensus       136 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~~~~~l~~e  173 (296)
T PRK05872        136 GYVLQVSSLAAFAAA------------------------------------------PGMAAYCASKAGVEAFANALRLE  173 (296)
T ss_pred             CEEEEEeCHhhcCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHH
Confidence            899999998776443                                          66789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCC-------------------CCCChhhhhhhhhhhhcc
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHA-------------------GILSVEEGAESPVKLALL  280 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~-------------------~~~~~~~~a~~~~~~~~~  280 (298)
                      +  .+|+||+|+||+++|++....                   ...++++.++..+..+..
T Consensus       174 ~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~  234 (296)
T PRK05872        174 VAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIER  234 (296)
T ss_pred             HHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhc
Confidence            8  589999999999999975431                   124667777666666553

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-33  Score=249.34  Aligned_cols=191  Identities=25%  Similarity=0.239  Sum_probs=163.2

Q ss_pred             CCCcEEEEeCCCC-chhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNK-GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~-gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +.+|+++||||+| |||+++++.|+++|++|++++|+.++++...++++...+. .++.++++|+++.++++++++.+.+
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGL-GRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEEccCCCHHHHHHHHHHHHH
Confidence            4579999999985 9999999999999999999999988877777777652211 1378899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-CC
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SP  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g  161 (298)
                      .++++|+||||||......                       +.+.+.+.|++.+++|+.+++.+++.++|.|+.+. .|
T Consensus        94 ~~g~id~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g  150 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTP-----------------------VVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGG  150 (262)
T ss_pred             HcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc
Confidence            9999999999999754321                       22357788999999999999999999999998765 68


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||+++|..+..+.                                          ++...|++||+|+++|+++++.|+
T Consensus       151 ~iv~~ss~~~~~~~------------------------------------------~~~~~Y~~sKaal~~~~~~la~e~  188 (262)
T PRK07831        151 VIVNNASVLGWRAQ------------------------------------------HGQAHYAAAKAGVMALTRCSALEA  188 (262)
T ss_pred             EEEEeCchhhcCCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHh
Confidence            99999997765432                                          557789999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~  260 (298)
                        .+|+||+|+||+++|++..
T Consensus       189 ~~~gI~v~~i~Pg~~~t~~~~  209 (262)
T PRK07831        189 AEYGVRINAVAPSIAMHPFLA  209 (262)
T ss_pred             CccCeEEEEEeeCCccCcccc
Confidence              4899999999999999754

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2e-33  Score=248.44  Aligned_cols=184  Identities=27%  Similarity=0.367  Sum_probs=155.3

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|+++||||++|||+++|++|+++|++|++++++.+..   .+++...     .+.++++|++++++++++++.+.+.
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~-----~~~~~~~Dl~~~~~~~~~~~~~~~~   76 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK-----GVFTIKCDVGNRDQVKKSKEVVEKE   76 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC-----CCeEEEecCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999987765432   2233322     1678999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      ++++|+||||||.....+                       +.+.+.+.+++.+++|+.+++++++.++|.|++++.|+|
T Consensus        77 ~~~id~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~i  133 (255)
T PRK06463         77 FGRVDVLVNNAGIMYLMP-----------------------FEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAI  133 (255)
T ss_pred             cCCCCEEEECCCcCCCCC-----------------------hhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence            999999999999864321                       123477889999999999999999999999987777999


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+                                         +.++...|++||+|+++|+++++.|+  
T Consensus       134 v~isS~~~~~~-----------------------------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~  172 (255)
T PRK06463        134 VNIASNAGIGT-----------------------------------------AAEGTTFYAITKAGIIILTRRLAFELGK  172 (255)
T ss_pred             EEEcCHHhCCC-----------------------------------------CCCCccHhHHHHHHHHHHHHHHHHHhhh
Confidence            99999766421                                         12456789999999999999999998  


Q ss_pred             CCcEEEEeeCCeeecCCC
Q 022357          242 PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~  259 (298)
                      .+|+||.|+||+|+|++.
T Consensus       173 ~~i~v~~i~Pg~v~t~~~  190 (255)
T PRK06463        173 YGIRVNAVAPGWVETDMT  190 (255)
T ss_pred             cCeEEEEEeeCCCCCchh
Confidence            489999999999999975

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=2.9e-33  Score=247.49  Aligned_cols=194  Identities=25%  Similarity=0.303  Sum_probs=167.6

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+++|+++||||++|||++++++|+++|++|++++|+.+.++...+++..... ...+.++++|+++.++++.+++.+
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFP-EREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCC-CCeEEEEECCCCCHHHHHHHHHHH
Confidence            3457889999999999999999999999999999999998888777777765421 123888999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||.....                       ++.+.+.+++++.+++|+.+++.++++++|+|++++.
T Consensus        83 ~~~~g~id~li~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  139 (257)
T PRK09242         83 EDHWDGLHILVNNAGGNIRK-----------------------AAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHAS  139 (257)
T ss_pred             HHHcCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999975322                       1223578889999999999999999999999987777


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+..+.                                          +....|+++|++++.|+++++.+
T Consensus       140 ~~ii~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e  177 (257)
T PRK09242        140 SAIVNIGSVSGLTHV------------------------------------------RSGAPYGMTKAALLQMTRNLAVE  177 (257)
T ss_pred             ceEEEECccccCCCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHH
Confidence            899999998776443                                          55678999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      +  .+|+||+|+||+++|++..
T Consensus       178 ~~~~~i~v~~i~Pg~i~t~~~~  199 (257)
T PRK09242        178 WAEDGIRVNAVAPWYIRTPLTS  199 (257)
T ss_pred             HHHhCeEEEEEEECCCCCcccc
Confidence            8  5899999999999999864

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-32  Score=241.80  Aligned_cols=220  Identities=23%  Similarity=0.294  Sum_probs=181.0

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|+++||||++|||++++++|+++|++|++++|+.+++++..+.++..+..   +.++++|+++.++++++++++.+.
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~~~~~~~~~~~~   84 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIE---AHGYVCDVTDEDGVQAMVSQIEKE   84 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCc---eEEEEcCCCCHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999988887777777654433   889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      ++++|+||||||.....+                       +.+.+.+.+.+.+++|+.+++.+++.++|.|++++.++|
T Consensus        85 ~~~id~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~i  141 (265)
T PRK07097         85 VGVIDILVNNAGIIKRIP-----------------------MLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKI  141 (265)
T ss_pred             CCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEE
Confidence            999999999999865432                       123577899999999999999999999999988778999


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+.                                          +....|+++|+|++.|+++++.++  
T Consensus       142 v~isS~~~~~~~------------------------------------------~~~~~Y~~sKaal~~l~~~la~e~~~  179 (265)
T PRK07097        142 INICSMMSELGR------------------------------------------ETVSAYAAAKGGLKMLTKNIASEYGE  179 (265)
T ss_pred             EEEcCccccCCC------------------------------------------CCCccHHHHHHHHHHHHHHHHHHhhh
Confidence            999998776443                                          557889999999999999999999  


Q ss_pred             CCcEEEEeeCCeeecCCCCCC-----------------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          242 PKFCVNCVCPGFVKTDINFHA-----------------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~-----------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      .+|+||+|+||+|.|++....                       .+.+|++.+...+.++..+....+|..+.
T Consensus       180 ~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~  252 (265)
T PRK07097        180 ANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASNFVNGHILY  252 (265)
T ss_pred             cCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCcccCCCCCCEEE
Confidence            589999999999999864211                       12345666666666665544444454443

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=4.1e-33  Score=249.70  Aligned_cols=190  Identities=26%  Similarity=0.326  Sum_probs=161.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||++|||++++++|+++|++|++++|+.+...+..+++..    ..++.++++|+++.++++++++.+.+
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~   90 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG----EPNVCFFHCDVTVEDDVSRAVDFTVD   90 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC----CCceEEEEeecCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999987766666555532    12388999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||......                     ..+.+.+.+++++.+++|+.++++++++++|.|.+++.|+
T Consensus        91 ~~g~id~li~~Ag~~~~~~---------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~  149 (280)
T PLN02253         91 KFGTLDIMVNNAGLTGPPC---------------------PDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGS  149 (280)
T ss_pred             HhCCCCEEEECCCcCCCCC---------------------CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCce
Confidence            9999999999999753210                     0122357888999999999999999999999997766789


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++++++++.|+ 
T Consensus       150 ii~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~  187 (280)
T PLN02253        150 IVSLCSVASAIGG------------------------------------------LGPHAYTGSKHAVLGLTRSVAAELG  187 (280)
T ss_pred             EEEecChhhcccC------------------------------------------CCCcccHHHHHHHHHHHHHHHHHhh
Confidence            9999998775432                                          445689999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCC
Q 022357          242 -PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~  259 (298)
                       ++|+||+|+||+++|++.
T Consensus       188 ~~gi~v~~i~pg~v~t~~~  206 (280)
T PLN02253        188 KHGIRVNCVSPYAVPTALA  206 (280)
T ss_pred             hcCeEEEEEeeCccccccc
Confidence             589999999999999864

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=3e-32  Score=248.49  Aligned_cols=253  Identities=23%  Similarity=0.274  Sum_probs=185.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ++|+++||||++|||+++|++|+++| ++|++++|+.+++.+..+++...+   ..+.++++|+++.++++++++.+.+.
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~~   78 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPK---DSYTIMHLDLGSLDSVRQFVQQFRES   78 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCC---CeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999999 999999999887777776665322   23788899999999999999999888


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC--CC
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--SP  161 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g  161 (298)
                      ++++|++|||||+..+....                      ...+.+.++..+++|+.+++.+++.++|.|++++  .|
T Consensus        79 ~~~iD~lI~nAG~~~~~~~~----------------------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g  136 (314)
T TIGR01289        79 GRPLDALVCNAAVYFPTAKE----------------------PRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDK  136 (314)
T ss_pred             CCCCCEEEECCCccccCccc----------------------cccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCC
Confidence            89999999999975321100                      1246788999999999999999999999998663  48


Q ss_pred             cEEEEccCcccccCCch--HHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          162 RLVNLSSYVSALKDLPE--KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      +||++||..+.......  .+...+.+.        ..+..+. .  +.........+.....|++||+|+..+++.|+.
T Consensus       137 ~IV~vsS~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~--~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~  205 (314)
T TIGR01289       137 RLIIVGSITGNTNTLAGNVPPKANLGDL--------SGLAAGF-K--APIAMIDGKEFKGAKAYKDSKVCNMLTVRELHR  205 (314)
T ss_pred             eEEEEecCccccccCCCcCCCccccccc--------ccccccC-C--CcccccCCCCcchhhhHHHhHHHHHHHHHHHHH
Confidence            99999998875421100  000000000        0000000 0  000000111224457899999999999999999


Q ss_pred             hC---CCcEEEEeeCCee-ecCCCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          240 RY---PKFCVNCVCPGFV-KTDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       240 e~---~~i~vn~v~PG~v-~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      ++   .+|+|++|+||+| .|++....                 ...++++.++..+..+..+....+|.||..+
T Consensus       206 ~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~  280 (314)
T TIGR01289       206 RFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWG  280 (314)
T ss_pred             HhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeeecC
Confidence            87   3899999999999 69886431                 1468899999988888776655678888643

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-33  Score=247.83  Aligned_cols=184  Identities=26%  Similarity=0.250  Sum_probs=158.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|+++||||++|||++++++|+++|++|++++|++++++...+++......  ++.++++|+++.++++++++.    
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGV--DVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCC--ceEEEEecCCCHHHHHHHHHH----
Confidence            67899999999999999999999999999999999988888777777654332  378899999999998887753    


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      ++++|++|||||.....                       ++.+.+.++|++.+++|+.++++++++++|.|++++.|+|
T Consensus        79 ~g~id~lv~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~i  135 (259)
T PRK06125         79 AGDIDILVNNAGAIPGG-----------------------GLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVI  135 (259)
T ss_pred             hCCCCEEEECCCCCCCC-----------------------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEE
Confidence            58999999999976432                       1223578999999999999999999999999987777899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+.                                          +.+..|+++|+|+++|+++++.|+  
T Consensus       136 v~iss~~~~~~~------------------------------------------~~~~~y~ask~al~~~~~~la~e~~~  173 (259)
T PRK06125        136 VNVIGAAGENPD------------------------------------------ADYICGSAGNAALMAFTRALGGKSLD  173 (259)
T ss_pred             EEecCccccCCC------------------------------------------CCchHhHHHHHHHHHHHHHHHHHhCc
Confidence            999997765332                                          557789999999999999999998  


Q ss_pred             CCcEEEEeeCCeeecCC
Q 022357          242 PKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~  258 (298)
                      .+|+||+|+||+++|++
T Consensus       174 ~gi~v~~i~PG~v~t~~  190 (259)
T PRK06125        174 DGVRVVGVNPGPVATDR  190 (259)
T ss_pred             cCeEEEEEecCccccHH
Confidence            48999999999999985

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=1.9e-32  Score=229.58  Aligned_cols=223  Identities=29%  Similarity=0.405  Sum_probs=182.8

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHC-CCEEEE-EecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            7 KYAVVTGSNKGIGFETVRQLASK-GITVVL-TARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~-G~~Vii-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +.++||||++|||..++++|.+. |-++++ ++|+++..   .+++........+++.+++|+++.++++++++++.+..
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            66999999999999999999986 677655 56767765   33333333233459999999999999999999999875


Q ss_pred             C--CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC--
Q 022357           85 G--KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS--  160 (298)
Q Consensus        85 g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--  160 (298)
                      |  .+|+||+|||+..+-...                      .....+.|.+.+++|..|++++.|+|+|++++...  
T Consensus        81 g~~GlnlLinNaGi~~~y~~~----------------------~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~  138 (249)
T KOG1611|consen   81 GSDGLNLLINNAGIALSYNTV----------------------LKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKV  138 (249)
T ss_pred             ccCCceEEEeccceeeecccc----------------------cCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcc
Confidence            4  799999999987543211                      12356778899999999999999999999986542  


Q ss_pred             ---------CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHH
Q 022357          161 ---------PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVIN  231 (298)
Q Consensus       161 ---------g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~  231 (298)
                               ..|||+||..+..+.                                       ..+....+|.+||+|++
T Consensus       139 ~gd~~s~~raaIinisS~~~s~~~---------------------------------------~~~~~~~AYrmSKaAlN  179 (249)
T KOG1611|consen  139 SGDGLSVSRAAIINISSSAGSIGG---------------------------------------FRPGGLSAYRMSKAALN  179 (249)
T ss_pred             cCCcccccceeEEEeeccccccCC---------------------------------------CCCcchhhhHhhHHHHH
Confidence                     389999998876442                                       23355789999999999


Q ss_pred             HHHHHHHHhCC--CcEEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          232 AYTRILAKRYP--KFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       232 ~l~~~la~e~~--~i~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +|+|+++.|++  +|.|..+|||||.|+|......+++|+.+..++..........+|.||-..
T Consensus       180 ~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~d  243 (249)
T KOG1611|consen  180 MFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKKAALTVEESTSKLLASINKLKNEHNGGFFNRD  243 (249)
T ss_pred             HHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCCcccchhhhHHHHHHHHHhcCcccCcceEccC
Confidence            99999999994  788999999999999999888999999999999999888888888888653

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=3.9e-32  Score=240.02  Aligned_cols=187  Identities=26%  Similarity=0.376  Sum_probs=161.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +|++|||||++|||+++++.|+++|++|++++|+.+.++....++...+.   .+.++++|++++++++++++.+.++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGG---KAIAVKADVSDRDQVFAAVRQVVDTFG   78 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999999998887777777765433   278899999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-CCcEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLV  164 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv  164 (298)
                      ++|++|||||.....+                       +.+.+.+.+++.+++|+.+++.+++.+++.|++.+ .++||
T Consensus        79 ~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv  135 (256)
T PRK08643         79 DLNVVVNNAGVAPTTP-----------------------IETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKII  135 (256)
T ss_pred             CCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence            9999999999753321                       12357788999999999999999999999997654 47999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||..+..+.                                          +....|++||++++.|++.++.++  .
T Consensus       136 ~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~  173 (256)
T PRK08643        136 NATSQAGVVGN------------------------------------------PELAVYSSTKFAVRGLTQTAARDLASE  173 (256)
T ss_pred             EECccccccCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhccc
Confidence            99998765443                                          556789999999999999999998  4


Q ss_pred             CcEEEEeeCCeeecCCCC
Q 022357          243 KFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~  260 (298)
                      ||+||+|+||+++|++..
T Consensus       174 gi~v~~i~Pg~v~t~~~~  191 (256)
T PRK08643        174 GITVNAYAPGIVKTPMMF  191 (256)
T ss_pred             CcEEEEEeeCCCcChhhh
Confidence            899999999999998753

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-32  Score=243.77  Aligned_cols=208  Identities=26%  Similarity=0.354  Sum_probs=179.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++++++|||||||||++++++|+++|++|++++|++++++...+.+.       .+.++++|+++.++++++++.+.+
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~   74 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-------LVVGGPLDVTDPASFAAFLDAVEA   74 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-------cceEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999887766655543       277889999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|++|||||......                       +.+.+.+.+.+.+++|+.+++.+++.++|.|++++.|+
T Consensus        75 ~~~~id~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~  131 (273)
T PRK07825         75 DLGPIDVLVNNAGVMPVGP-----------------------FLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGH  131 (273)
T ss_pred             HcCCCCEEEECCCcCCCCc-----------------------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence            9999999999999864332                       22357788999999999999999999999999888899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|++||+++.+|+++++.++ 
T Consensus       132 iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~l~~el~  169 (273)
T PRK07825        132 VVNVASLAGKIPV------------------------------------------PGMATYCASKHAVVGFTDAARLELR  169 (273)
T ss_pred             EEEEcCccccCCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhh
Confidence            9999998876543                                          667899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC------CCCChhhhhhhhhhhhccCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA------GILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~------~~~~~~~~a~~~~~~~~~~~  282 (298)
                       .||+|+.|+||++.|++....      +..++++.++..+..+..++
T Consensus       170 ~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        170 GTGVHVSVVLPSFVNTELIAGTGGAKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             ccCcEEEEEeCCcCcchhhcccccccCCCCCCHHHHHHHHHHHHhCCC
Confidence             599999999999999875432      45789999999888877544

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=5.8e-33  Score=245.45  Aligned_cols=219  Identities=23%  Similarity=0.284  Sum_probs=177.3

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|+++||||++|||++++++|+++|++|++++|+.+......++++..+.+   +.++.+|+++.++++++++.+.+.
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~---~~~~~~D~~~~~~i~~~~~~~~~~   85 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ---AFACRCDITSEQELSALADFALSK   85 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999988777777777654433   788999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      ++++|++|||||...+.+.                        +.+.+.+++.+++|+.+++.++++++|.|.+.+.++|
T Consensus        86 ~~~~d~li~~ag~~~~~~~------------------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i  141 (255)
T PRK06113         86 LGKVDILVNNAGGGGPKPF------------------------DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVI  141 (255)
T ss_pred             cCCCCEEEECCCCCCCCCC------------------------CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEE
Confidence            9999999999997543211                        2466788899999999999999999999987667899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+.                                          ++...|++||+|+++|+++++.++  
T Consensus       142 v~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~  179 (255)
T PRK06113        142 LTITSMAAENKN------------------------------------------INMTSYASSKAAASHLVRNMAFDLGE  179 (255)
T ss_pred             EEEecccccCCC------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhhh
Confidence            999998776443                                          556789999999999999999998  


Q ss_pred             CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          242 PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      .+|+||.|+||+++|++....                ...+|++.++..+..+.......+|..+.
T Consensus       180 ~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~  245 (255)
T PRK06113        180 KNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILT  245 (255)
T ss_pred             hCeEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEE
Confidence            589999999999999875421                12355566665555554333444444443

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=3.6e-32  Score=239.02  Aligned_cols=220  Identities=24%  Similarity=0.275  Sum_probs=173.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++|+++||||++|||++++++|+++|++|++++|+..  ....+.++..+.   .+.++++|+++.++++++++++.+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~   76 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGR---RFLSLTADLSDIEAIKALVDSAVE   76 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCC---ceEEEECCCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999752  344444544332   288999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-CC
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SP  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g  161 (298)
                      .++++|++|||||......                       +.+.+.+.+++.+++|+.+++.++++++|.|.+++ .|
T Consensus        77 ~~~~~d~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g  133 (248)
T TIGR01832        77 EFGHIDILVNNAGIIRRAD-----------------------AEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGG  133 (248)
T ss_pred             HcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCe
Confidence            8999999999999864321                       12246778889999999999999999999997654 68


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|+.+++++++.++
T Consensus       134 ~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~  171 (248)
T TIGR01832       134 KIINIASMLSFQGG------------------------------------------IRVPSYTASKHGVAGLTKLLANEW  171 (248)
T ss_pred             EEEEEecHHhccCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHh
Confidence            99999997765432                                          456789999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                        .+|+||+|+||+|+|++....                 .+.+|++.++..+.++.......+|.++..
T Consensus       172 ~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~  241 (248)
T TIGR01832       172 AAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTLAV  241 (248)
T ss_pred             CccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCcEEEe
Confidence              489999999999999975321                 134566666666665554333444444433

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-32  Score=245.22  Aligned_cols=214  Identities=25%  Similarity=0.323  Sum_probs=178.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|+++||||+||||+++|++|+++|++|++++|+.+.+++..+++...+..   +.++++|+++.++++++++.+.+
T Consensus        37 ~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~---~~~~~~Dl~d~~~v~~~~~~~~~  113 (293)
T PRK05866         37 DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGD---AMAVPCDLSDLDAVDALVADVEK  113 (293)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHHH
Confidence            356799999999999999999999999999999999988888887777654433   78899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|++|||||........+.                     ..+.+.++..+++|+.|++.++++++|.|++++.|+
T Consensus       114 ~~g~id~li~~AG~~~~~~~~~~---------------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~  172 (293)
T PRK05866        114 RIGGVDILINNAGRSIRRPLAES---------------------LDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGH  172 (293)
T ss_pred             HcCCCCEEEECCCCCCCcchhhc---------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence            99999999999997643321110                     013467788999999999999999999998877899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+...                                         ..+....|++||+|+++|+++++.|+ 
T Consensus       173 iv~isS~~~~~~-----------------------------------------~~p~~~~Y~asKaal~~l~~~la~e~~  211 (293)
T PRK05866        173 IINVATWGVLSE-----------------------------------------ASPLFSVYNASKAALSAVSRVIETEWG  211 (293)
T ss_pred             EEEECChhhcCC-----------------------------------------CCCCcchHHHHHHHHHHHHHHHHHHhc
Confidence            999999654321                                         12556789999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC------CCCChhhhhhhhhhhhccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA------GILSVEEGAESPVKLALLP  281 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~------~~~~~~~~a~~~~~~~~~~  281 (298)
                       .+|+|++|+||+|+|++....      ...+|++.|+..+..+...
T Consensus       212 ~~gI~v~~v~pg~v~T~~~~~~~~~~~~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        212 DRGVHSTTLYYPLVATPMIAPTKAYDGLPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             ccCcEEEEEEcCcccCccccccccccCCCCCCHHHHHHHHHHHHhcC
Confidence             589999999999999986432      3469999999888877653

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=6e-33  Score=245.77  Aligned_cols=185  Identities=28%  Similarity=0.326  Sum_probs=156.4

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|++|||||++|||++++++|+++|++|++++|+.. ..+..+++...+..   +.++++|+++.++++++++++.+.
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGE---ALALTADLETYAGAQAAMAAAVEA   81 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCe---EEEEEEeCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999853 44555556544332   788999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      ++++|+||||||.....                      .++.+.+.+.+++.+++|+.+++.+++.++|.|++++.|+|
T Consensus        82 ~~~id~lv~nAg~~~~~----------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~i  139 (260)
T PRK12823         82 FGRIDVLINNVGGTIWA----------------------KPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAI  139 (260)
T ss_pred             cCCCeEEEECCccccCC----------------------CChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeE
Confidence            99999999999964211                      11223577889999999999999999999999987777899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..                                            .....|++||+|++.|+++++.++  
T Consensus       140 v~~sS~~~~~--------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~  175 (260)
T PRK12823        140 VNVSSIATRG--------------------------------------------INRVPYSAAKGGVNALTASLAFEYAE  175 (260)
T ss_pred             EEEcCccccC--------------------------------------------CCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            9999976431                                            224579999999999999999998  


Q ss_pred             CCcEEEEeeCCeeecCC
Q 022357          242 PKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~  258 (298)
                      .+|+||+|+||+|+|++
T Consensus       176 ~gi~v~~v~Pg~v~t~~  192 (260)
T PRK12823        176 HGIRVNAVAPGGTEAPP  192 (260)
T ss_pred             cCcEEEEEecCccCCcc
Confidence            58999999999999985

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=4.9e-33  Score=245.89  Aligned_cols=187  Identities=30%  Similarity=0.393  Sum_probs=158.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|+++||||+||||+++|++|+++|++|++++|+..+..+..+.+   +.   .+.++++|+++.++++++++++.+
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~---~~~~~~~Dl~~~~~~~~~~~~~~~   80 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GE---NAWFIAMDVADEAQVAAGVAEVLG   80 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CC---ceEEEEccCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999876655544332   21   278899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      +++++|++|||||......                     .++.+.+.+++++.+++|+.+++.+++++.|.|+++ .|+
T Consensus        81 ~~g~id~li~~ag~~~~~~---------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~  138 (255)
T PRK05717         81 QFGRLDALVCNAAIADPHN---------------------TTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGA  138 (255)
T ss_pred             HhCCCCEEEECCCcccCCC---------------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcE
Confidence            9999999999999764310                     122235778899999999999999999999999754 489


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|++.++++++.++ 
T Consensus       139 ii~~sS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~la~~~~  176 (255)
T PRK05717        139 IVNLASTRARQSE------------------------------------------PDTEAYAASKGGLLALTHALAISLG  176 (255)
T ss_pred             EEEEcchhhcCCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhc
Confidence            9999998776443                                          556789999999999999999998 


Q ss_pred             CCcEEEEeeCCeeecCCC
Q 022357          242 PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~  259 (298)
                      ++|+||+|+||+++|++.
T Consensus       177 ~~i~v~~i~Pg~i~t~~~  194 (255)
T PRK05717        177 PEIRVNAVSPGWIDARDP  194 (255)
T ss_pred             CCCEEEEEecccCcCCcc
Confidence            579999999999999874

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=5.6e-33  Score=242.66  Aligned_cols=180  Identities=20%  Similarity=0.262  Sum_probs=152.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +|++|||||++|||++++++|+++|++|++++|++.+..   +.+...+     +.++.+|+++.++++++++.+.+.++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~~   73 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQAG-----AQCIQADFSTNAGIMAFIDELKQHTD   73 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHcC-----CEEEEcCCCCHHHHHHHHHHHHhhCC
Confidence            579999999999999999999999999999999876432   3333222     56789999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC--CCcE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--SPRL  163 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~i  163 (298)
                      ++|++|||||.......                       .+.+.+.|++.+++|+.+++.+++.++|.|++++  .|+|
T Consensus        74 ~id~lv~~ag~~~~~~~-----------------------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~i  130 (236)
T PRK06483         74 GLRAIIHNASDWLAEKP-----------------------GAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDI  130 (236)
T ss_pred             CccEEEECCccccCCCc-----------------------CccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceE
Confidence            99999999997533211                       1246788999999999999999999999998765  5899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-C
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-P  242 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-~  242 (298)
                      |++||..+..+.                                          +....|++||+|+++|+++++.++ +
T Consensus       131 v~~ss~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~~a~e~~~  168 (236)
T PRK06483        131 IHITDYVVEKGS------------------------------------------DKHIAYAASKAALDNMTLSFAAKLAP  168 (236)
T ss_pred             EEEcchhhccCC------------------------------------------CCCccHHHHHHHHHHHHHHHHHHHCC
Confidence            999997654332                                          557889999999999999999999 5


Q ss_pred             CcEEEEeeCCeeecCC
Q 022357          243 KFCVNCVCPGFVKTDI  258 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~  258 (298)
                      +||||+|+||++.|+.
T Consensus       169 ~irvn~v~Pg~~~~~~  184 (236)
T PRK06483        169 EVKVNSIAPALILFNE  184 (236)
T ss_pred             CcEEEEEccCceecCC
Confidence            7999999999998864

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-33  Score=248.18  Aligned_cols=242  Identities=21%  Similarity=0.245  Sum_probs=172.6

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +|+++|||| ||||+++|++|+ +|++|++++|+.+++++..++++..+.   ++.++++|+++.++++++++.+ ++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dv~d~~~i~~~~~~~-~~~g   75 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGF---DVSTQEVDVSSRESVKALAATA-QTLG   75 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEEeecCCHHHHHHHHHHH-HhcC
Confidence            689999998 699999999997 799999999998877777777765432   3788999999999999999987 5689


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|+||||||+..                              ..+.+++.+++|+.+++++++.+.|.|++  .|++|+
T Consensus        76 ~id~li~nAG~~~------------------------------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~  123 (275)
T PRK06940         76 PVTGLVHTAGVSP------------------------------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVV  123 (275)
T ss_pred             CCCEEEECCCcCC------------------------------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEE
Confidence            9999999999752                              12456788999999999999999999964  378999


Q ss_pred             EccCcccccC-CchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          166 LSSYVSALKD-LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       166 vsS~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      +||.++.... .....+....   .....++....  .        .......+....|++||+|+++++++++.++  .
T Consensus       124 isS~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~--------~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~  190 (275)
T PRK06940        124 IASQSGHRLPALTAEQERALA---TTPTEELLSLP--F--------LQPDAIEDSLHAYQIAKRANALRVMAEAVKWGER  190 (275)
T ss_pred             EEecccccCcccchhhhcccc---ccccccccccc--c--------ccccccCCccchhHHHHHHHHHHHHHHHHHHccC
Confidence            9998876431 1100000000   00000000000  0        0000001245789999999999999999999  5


Q ss_pred             CcEEEEeeCCeeecCCCCCC-CCCCh----hhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          243 KFCVNCVCPGFVKTDINFHA-GILSV----EEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~~-~~~~~----~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +||||+|+||+|+|++.... .....    ......|+++...|++++....|+.++.++|
T Consensus       191 gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peeia~~~~fL~s~~~~~  251 (275)
T PRK06940        191 GARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDEIAALAEFLMGPRGSF  251 (275)
T ss_pred             CeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCHHHHHHHHHHHcCcccCc
Confidence            89999999999999986321 11111    1122346667777777788888888776654

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=242.70  Aligned_cols=184  Identities=22%  Similarity=0.253  Sum_probs=158.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +|+++||||++|||++++++|+++|++|++++|+..+++...+++...+.   .+.++++|++++++++++++++.+.++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPG---QVLTVQMDVRNPEDVQKMVEQIDEKFG   77 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            58999999999999999999999999999999998877777776665432   388999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC-CCCcEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLV  164 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv  164 (298)
                      ++|++|||||.....                       ++.+.+.+.|++.+++|+.++++++++++|.|.+. ..|+||
T Consensus        78 ~id~lI~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii  134 (252)
T PRK07677         78 RIDALINNAAGNFIC-----------------------PAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNII  134 (252)
T ss_pred             CccEEEECCCCCCCC-----------------------CcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            999999999964321                       12235788999999999999999999999998654 358999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC---
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY---  241 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~---  241 (298)
                      ++||..+..+.                                          +....|++||+|+++|+++|+.++   
T Consensus       135 ~isS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~  172 (252)
T PRK07677        135 NMVATYAWDAG------------------------------------------PGVIHSAAAKAGVLAMTRTLAVEWGRK  172 (252)
T ss_pred             EEcChhhccCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhCcc
Confidence            99998765432                                          556789999999999999999998   


Q ss_pred             CCcEEEEeeCCeeecC
Q 022357          242 PKFCVNCVCPGFVKTD  257 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~  257 (298)
                      .||+||+|+||+++|+
T Consensus       173 ~gi~v~~v~PG~v~~~  188 (252)
T PRK07677        173 YGIRVNAIAPGPIERT  188 (252)
T ss_pred             cCeEEEEEeecccccc
Confidence            2899999999999964

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-33  Score=255.17  Aligned_cols=193  Identities=19%  Similarity=0.205  Sum_probs=144.3

Q ss_pred             CcCCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHH----------hcCC------------CC
Q 022357            2 AEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK----------ASGV------------DP   57 (298)
Q Consensus         2 ~~~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~----------~~~~------------~~   57 (298)
                      ..+.+|++|||||+  +|||+++|++|+++|++|++.++.+ .+........          ..+.            +.
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            34689999999995  9999999999999999999987652 1111111000          0000            00


Q ss_pred             cceeEEEeccCc--------HHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhh
Q 022357           58 ELLLFHQLDISD--------LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQT  129 (298)
Q Consensus        58 ~~~~~~~~Dls~--------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (298)
                      ....-+.+|+++        ..+++++++.+.+++|++|+||||||....                     .+.++.+.+
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~---------------------~~~~~~~~~  141 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPE---------------------ISKPLLETS  141 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcc---------------------cCCChhhCC
Confidence            001222222222        236899999999999999999999986421                     112344578


Q ss_pred             HHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhh
Q 022357          130 YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG  209 (298)
Q Consensus       130 ~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (298)
                      .++|++.+++|+.|+++++++++|.|++  .|+||+++|+.+..+.                                  
T Consensus       142 ~e~~~~~~~vNl~g~~~l~~a~~p~m~~--~G~ii~iss~~~~~~~----------------------------------  185 (299)
T PRK06300        142 RKGYLAALSTSSYSFVSLLSHFGPIMNP--GGSTISLTYLASMRAV----------------------------------  185 (299)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCeEEEEeehhhcCcC----------------------------------
Confidence            8999999999999999999999999964  4799999997775432                                  


Q ss_pred             hhhcCCCCCCCc-hhhhHHHHHHHHHHHHHHhC-C--CcEEEEeeCCeeecCCCC
Q 022357          210 EIANRGWCPHSS-AYKVSKAVINAYTRILAKRY-P--KFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       210 ~~~~~~~~~~~~-~Y~~sK~al~~l~~~la~e~-~--~i~vn~v~PG~v~t~~~~  260 (298)
                              +.+. .|++||+|+.+|+++|+.|+ +  |||||+|+||+++|++..
T Consensus       186 --------p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~  232 (299)
T PRK06300        186 --------PGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGK  232 (299)
T ss_pred             --------CCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhh
Confidence                    4443 79999999999999999998 3  899999999999999853

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-33  Score=245.35  Aligned_cols=192  Identities=29%  Similarity=0.354  Sum_probs=161.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+++|+++||||++|||++++++|+++|++|++++|+.. ..+..+++...+.   ++.++++|+++.++++++++++
T Consensus         1 ~~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~---~~~~~~~Dl~~~~~v~~~~~~~   76 (263)
T PRK08226          1 MGKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGH---RCTAVVADVRDPASVAAAIKRA   76 (263)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCC---ceEEEECCCCCHHHHHHHHHHH
Confidence            77888999999999999999999999999999999999874 3444455544332   3788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||.......                       .+.+.+.+++.+++|+.+++.++++++|.|.+++.
T Consensus        77 ~~~~~~id~vi~~ag~~~~~~~-----------------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  133 (263)
T PRK08226         77 KEKEGRIDILVNNAGVCRLGSF-----------------------LDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKD  133 (263)
T ss_pred             HHHcCCCCEEEECCCcCCCCCc-----------------------ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999997643321                       12466888899999999999999999999977667


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+...                                         ..+....|+++|+++++++++++.+
T Consensus       134 ~~iv~isS~~~~~~-----------------------------------------~~~~~~~Y~~sK~a~~~~~~~la~~  172 (263)
T PRK08226        134 GRIVMMSSVTGDMV-----------------------------------------ADPGETAYALTKAAIVGLTKSLAVE  172 (263)
T ss_pred             cEEEEECcHHhccc-----------------------------------------CCCCcchHHHHHHHHHHHHHHHHHH
Confidence            89999999765321                                         1145678999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      +  .+|+||+|+||+++|++..
T Consensus       173 ~~~~~i~v~~i~pg~v~t~~~~  194 (263)
T PRK08226        173 YAQSGIRVNAICPGYVRTPMAE  194 (263)
T ss_pred             hcccCcEEEEEecCcccCHHHH
Confidence            8  4899999999999998753

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-33  Score=246.55  Aligned_cols=188  Identities=22%  Similarity=0.269  Sum_probs=162.1

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+|+++||||++|||+++|+.|+++|++|++++|+.+......+.+.   .   .+.++++|+++.++++++++.+
T Consensus         1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~---~~~~~~~D~~~~~~~~~~~~~~   74 (257)
T PRK07067          1 MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG---P---AAIAVSLDVTRQDSIDRIVAAA   74 (257)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC---C---ceEEEEccCCCHHHHHHHHHHH
Confidence            778899999999999999999999999999999999999877666555442   1   2788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-  159 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-  159 (298)
                      .+.++++|++|||||.....+                       +.+.+.+.+++.+++|+.+++.+++++++.|.+++ 
T Consensus        75 ~~~~~~id~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  131 (257)
T PRK07067         75 VERFGGIDILFNNAALFDMAP-----------------------ILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGR  131 (257)
T ss_pred             HHHcCCCCEEEECCCcCCCCC-----------------------cccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCC
Confidence            999999999999999764322                       12347788999999999999999999999987653 


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      +++||++||..+..+.                                          +....|++||++++.|++.++.
T Consensus       132 ~~~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~  169 (257)
T PRK07067        132 GGKIINMASQAGRRGE------------------------------------------ALVSHYCATKAAVISYTQSAAL  169 (257)
T ss_pred             CcEEEEeCCHHhCCCC------------------------------------------CCCchhhhhHHHHHHHHHHHHH
Confidence            5799999997665432                                          5678999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCC
Q 022357          240 RY--PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~  259 (298)
                      ++  .+|+||+|.||+++|++.
T Consensus       170 e~~~~gi~v~~i~pg~v~t~~~  191 (257)
T PRK07067        170 ALIRHGINVNAIAPGVVDTPMW  191 (257)
T ss_pred             HhcccCeEEEEEeeCcccchhh
Confidence            98  589999999999999864

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-32  Score=242.46  Aligned_cols=228  Identities=25%  Similarity=0.272  Sum_probs=181.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|+++||||++|||++++++|+++|++|++++|+......            ..+.++++|+++.++++++++.+.+
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~   73 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH------------ENYQFVPTDVSSAEEVNHTVAEIIE   73 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc------------CceEEEEccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999998754321            1278899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|++|||||...+....+.              ..-.++.+.+.+.|++.+++|+.+++.+++++.|.|++++.|+
T Consensus        74 ~~g~id~li~~Ag~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~  139 (266)
T PRK06171         74 KFGRIDGLVNNAGINIPRLLVDE--------------KDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGV  139 (266)
T ss_pred             HcCCCCEEEECCcccCCcccccc--------------ccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcE
Confidence            99999999999997643211110              0000112357889999999999999999999999998777799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|++||+|+++|+++++.++ 
T Consensus       140 iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~l~~~la~e~~  177 (266)
T PRK06171        140 IVNMSSEAGLEGS------------------------------------------EGQSCYAATKAALNSFTRSWAKELG  177 (266)
T ss_pred             EEEEccccccCCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhh
Confidence            9999998876443                                          567899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeee-cCCCCCC--------CCCChhhh-----h--hhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 -PKFCVNCVCPGFVK-TDINFHA--------GILSVEEG-----A--ESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~-t~~~~~~--------~~~~~~~~-----a--~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                       .+|+||+|+||+++ |++....        ...++++.     .  ..|+.+...|++++....|++++.++|
T Consensus       178 ~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~  251 (266)
T PRK06171        178 KHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASY  251 (266)
T ss_pred             hcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheeeeecccccc
Confidence             58999999999997 5553211        01112211     1  457888888999999999999987765

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-32  Score=238.56  Aligned_cols=183  Identities=28%  Similarity=0.409  Sum_probs=157.1

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.+.        ...+   ..+.++++|+++.++++++++.+
T Consensus         1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~---~~~~~~~~D~~~~~~~~~~~~~~   69 (252)
T PRK07856          1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDG---RPAEFHAADVRDPDQVAALVDAI   69 (252)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcC---CceEEEEccCCCHHHHHHHHHHH
Confidence            677899999999999999999999999999999999998654        1111   13788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC-C
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-D  159 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~  159 (298)
                      .+.++++|+||||||......                       +.+.+.+.+++.+++|+.+++.+++++.|.|.++ +
T Consensus        70 ~~~~~~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  126 (252)
T PRK07856         70 VERHGRLDVLVNNAGGSPYAL-----------------------AAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPG  126 (252)
T ss_pred             HHHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999764321                       1234678889999999999999999999999765 3


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          +....|++||+++++|++.++.
T Consensus       127 ~g~ii~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~l~~~la~  164 (252)
T PRK07856        127 GGSIVNIGSVSGRRPS------------------------------------------PGTAAYGAAKAGLLNLTRSLAV  164 (252)
T ss_pred             CcEEEEEcccccCCCC------------------------------------------CCCchhHHHHHHHHHHHHHHHH
Confidence            5899999998776443                                          5678899999999999999999


Q ss_pred             hC-CCcEEEEeeCCeeecCCC
Q 022357          240 RY-PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       240 e~-~~i~vn~v~PG~v~t~~~  259 (298)
                      ++ +.|+||.|+||+|+|++.
T Consensus       165 e~~~~i~v~~i~Pg~v~t~~~  185 (252)
T PRK07856        165 EWAPKVRVNAVVVGLVRTEQS  185 (252)
T ss_pred             HhcCCeEEEEEEeccccChHH
Confidence            98 469999999999999975

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.1e-33  Score=269.22  Aligned_cols=216  Identities=31%  Similarity=0.346  Sum_probs=174.7

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.   .   .+..+++|+++.++++++++.+.++
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~~~D~~~~~~~~~~~~~~~~~  340 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG---D---EHLSVQADITDEAAVESAFAQIQAR  340 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---C---ceeEEEccCCCHHHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999877766655442   1   2677899999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      +|++|+||||||.....                      .++.+.+.+.|++.+++|+.+++++++.++|.|  .+.|+|
T Consensus       341 ~g~id~li~nAg~~~~~----------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~i  396 (520)
T PRK06484        341 WGRLDVLVNNAGIAEVF----------------------KPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVI  396 (520)
T ss_pred             cCCCCEEEECCCCcCCC----------------------CChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEE
Confidence            99999999999975321                      122346889999999999999999999999999  345899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+.                                          ++...|++||+|+++|+++++.++  
T Consensus       397 v~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la~e~~~  434 (520)
T PRK06484        397 VNLGSIASLLAL------------------------------------------PPRNAYCASKAAVTMLSRSLACEWAP  434 (520)
T ss_pred             EEECchhhcCCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhh
Confidence            999998876543                                          667899999999999999999998  


Q ss_pred             CCcEEEEeeCCeeecCCCCCC------------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          242 PKFCVNCVCPGFVKTDINFHA------------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      .||+||+|+||+|+|++....                  ...+|++.++..+.++.......+|..+.
T Consensus       435 ~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~  502 (520)
T PRK06484        435 AGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLT  502 (520)
T ss_pred             hCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEE
Confidence            489999999999999875321                  12356666666666555433344444443

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=244.16  Aligned_cols=190  Identities=25%  Similarity=0.318  Sum_probs=161.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.. ......++++..+.   .+.++++|+++.++++++++.+.
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~i~~~~~~~~   80 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGG---EAIAVKGDVTVESDVVNLIQTAV   80 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCC---eEEEEEecCCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999988643 45556666655433   27889999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-C
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-S  160 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~  160 (298)
                      +.++++|++|||||.....+                       +.+.+.+.+++.+++|+.+++.+++.++|.|.++. .
T Consensus        81 ~~~g~id~lv~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~  137 (261)
T PRK08936         81 KEFGTLDVMINNAGIENAVP-----------------------SHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIK  137 (261)
T ss_pred             HHcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999764321                       12357788999999999999999999999997654 5


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|+++|+|+.+|+++++.+
T Consensus       138 g~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e  175 (261)
T PRK08936        138 GNIINMSSVHEQIPW------------------------------------------PLFVHYAASKGGVKLMTETLAME  175 (261)
T ss_pred             cEEEEEccccccCCC------------------------------------------CCCcccHHHHHHHHHHHHHHHHH
Confidence            899999997665432                                          66789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      +  .+|+||+|+||+|+|++..
T Consensus       176 ~~~~gi~v~~v~pg~v~t~~~~  197 (261)
T PRK08936        176 YAPKGIRVNNIGPGAINTPINA  197 (261)
T ss_pred             HhhcCeEEEEEEECcCCCCccc
Confidence            8  5899999999999999753

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-32  Score=237.57  Aligned_cols=221  Identities=28%  Similarity=0.273  Sum_probs=178.4

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .++.+|++|||||++|||++++++|+++|++|++++|+... .....++..   .  .+.++++|+++.++++++++.+.
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~---~--~~~~~~~Dl~~~~~~~~~~~~~~   84 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLLG---G--NAKGLVCDVSDSQSVEAAVAAVI   84 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhhC---C--ceEEEEecCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999998753 233333321   1  26789999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +.++++|++|||||.....+                       +.+.+.+.+++.+++|+.+++++++++.|.|++++.+
T Consensus        85 ~~~~~~d~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  141 (255)
T PRK06841         85 SAFGRIDILVNSAGVALLAP-----------------------AEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGG  141 (255)
T ss_pred             HHhCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCc
Confidence            99999999999999764321                       2235778889999999999999999999999877779


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|+++|+|+++++++++.++
T Consensus       142 ~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~  179 (255)
T PRK06841        142 KIVNLASQAGVVAL------------------------------------------ERHVAYCASKAGVVGMTKVLALEW  179 (255)
T ss_pred             eEEEEcchhhccCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHH
Confidence            99999998765443                                          567889999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                        .+|+||+|+||+|+|++....                .+.++++.++..+.++.......+|..+..+
T Consensus       180 ~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~d  249 (255)
T PRK06841        180 GPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENLVID  249 (255)
T ss_pred             HhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEEC
Confidence              589999999999999975321                1346777777777776655555556555543

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=242.49  Aligned_cols=224  Identities=24%  Similarity=0.298  Sum_probs=184.9

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..+.+|+++||||+++||++++++|+++|++|++++|+++.+.+..++++..+..   +.++.+|+++.+++.++++.+.
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~~~~~~~~~~   83 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGA---AEALAFDIADEEAVAAAFARID   83 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCc---eEEEEccCCCHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999988877777777654433   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ..++++|++|||||.....                       ++.+.+.+.+++.+++|+.+++.+++.+++.|.+++.+
T Consensus        84 ~~~~~id~vi~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  140 (256)
T PRK06124         84 AEHGRLDILVNNVGARDRR-----------------------PLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYG  140 (256)
T ss_pred             HhcCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc
Confidence            9999999999999975332                       22345778899999999999999999999999877779


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          ++...|+++|+|+.++++.++.++
T Consensus       141 ~iv~~ss~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~  178 (256)
T PRK06124        141 RIIAITSIAGQVAR------------------------------------------AGDAVYPAAKQGLTGLMRALAAEF  178 (256)
T ss_pred             EEEEEeechhccCC------------------------------------------CCccHhHHHHHHHHHHHHHHHHHH
Confidence            99999998776443                                          567899999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                        .+|+||+|+||+++|++....                 .+.++++.++..+.+........+|.++..+
T Consensus       179 ~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~d  249 (256)
T PRK06124        179 GPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVD  249 (256)
T ss_pred             HHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEEC
Confidence              589999999999999874321                 1345667777777666654445555555443

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=3.9e-32  Score=248.26  Aligned_cols=212  Identities=23%  Similarity=0.289  Sum_probs=169.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .|++++|||||+|||+++|++|+++|++|++++|+++++++..++++..... ..+..+.+|+++  ++.+.++.+.+.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~-~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSK-TQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCC-cEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            4799999999999999999999999999999999999998888888754321 237888999985  2333344444444


Q ss_pred             C--CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           85 G--KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        85 g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      +  .+|++|||||+..+..                     ..+.+.+.+++++.+++|+.|++.++++++|.|.+++.|+
T Consensus       129 ~~~didilVnnAG~~~~~~---------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~  187 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYA---------------------RFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGA  187 (320)
T ss_pred             cCCCccEEEEecCcCCCCC---------------------cccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcE
Confidence            4  4669999999863210                     0112357788999999999999999999999998877899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+....                                        ..+....|++||+|+++|+++|+.|+ 
T Consensus       188 IV~iSS~a~~~~~----------------------------------------~~p~~~~Y~aSKaal~~~~~~L~~El~  227 (320)
T PLN02780        188 IINIGSGAAIVIP----------------------------------------SDPLYAVYAATKAYIDQFSRCLYVEYK  227 (320)
T ss_pred             EEEEechhhccCC----------------------------------------CCccchHHHHHHHHHHHHHHHHHHHHh
Confidence            9999998764310                                        11557899999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCC--C--CCCChhhhhhhhhhhhcc
Q 022357          242 -PKFCVNCVCPGFVKTDINFH--A--GILSVEEGAESPVKLALL  280 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~--~--~~~~~~~~a~~~~~~~~~  280 (298)
                       .||+|++|+||+|+|++...  .  ...+|++.|+..+..+..
T Consensus       228 ~~gI~V~~v~PG~v~T~~~~~~~~~~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        228 KSGIDVQCQVPLYVATKMASIRRSSFLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             ccCeEEEEEeeCceecCcccccCCCCCCCCHHHHHHHHHHHhCC
Confidence             48999999999999998652  1  235899999998888864

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=5.1e-34  Score=250.38  Aligned_cols=219  Identities=31%  Similarity=0.374  Sum_probs=181.8

Q ss_pred             CCC--CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc-CCccE
Q 022357           13 GSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF-GKLDI   89 (298)
Q Consensus        13 Gas--~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~-g~id~   89 (298)
                      |++  +|||+++|++|+++|++|++++|+.++++..++++....+.    .++++|+++.++++++++++.+.+ |+||+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~----~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~   76 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGA----EVIQCDLSDEESVEALFDEAVERFGGRIDI   76 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS----EEEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC----ceEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence            566  99999999999999999999999999887777777765442    259999999999999999999999 99999


Q ss_pred             EEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEccC
Q 022357           90 LANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSY  169 (298)
Q Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~  169 (298)
                      ||||+|......                   ...++.+.+.+.|++.+++|+.+++.+++++.|+|+++  |+||++||.
T Consensus        77 lV~~a~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~  135 (241)
T PF13561_consen   77 LVNNAGISPPSN-------------------VEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSI  135 (241)
T ss_dssp             EEEEEESCTGGG-------------------TSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEG
T ss_pred             EEeccccccccc-------------------CCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccch
Confidence            999999765411                   12344457889999999999999999999999988754  899999998


Q ss_pred             cccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-C--CcEE
Q 022357          170 VSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-P--KFCV  246 (298)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-~--~i~v  246 (298)
                      .+..+.                                          +++..|+++|+|++.|+|++|.|+ +  ||||
T Consensus       136 ~~~~~~------------------------------------------~~~~~y~~sKaal~~l~r~lA~el~~~~gIrV  173 (241)
T PF13561_consen  136 AAQRPM------------------------------------------PGYSAYSASKAALEGLTRSLAKELAPKKGIRV  173 (241)
T ss_dssp             GGTSBS------------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEE
T ss_pred             hhcccC------------------------------------------ccchhhHHHHHHHHHHHHHHHHHhccccCeee
Confidence            765443                                          677899999999999999999999 5  8999


Q ss_pred             EEeeCCeeecCCCCCCC---CCChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          247 NCVCPGFVKTDINFHAG---ILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       247 n~v~PG~v~t~~~~~~~---~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      |+|+||+|+|++.....   ..........|+++...|++++....||+++.++|
T Consensus       174 N~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~  228 (241)
T PF13561_consen  174 NAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASY  228 (241)
T ss_dssp             EEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTT
T ss_pred             eeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccC
Confidence            99999999998753221   11222334668888888888888888888888765

...

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=9.3e-32  Score=245.30  Aligned_cols=228  Identities=28%  Similarity=0.270  Sum_probs=179.7

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|+++||||++|||++++++|+++|++|++++|+.++.++..+++..       +.++++|+++.++++++++++.+.
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~-------v~~~~~Dl~d~~~v~~~~~~~~~~   96 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDG-------VEVVMLDLADLESVRAFAERFLDS   96 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhh-------CeEEEccCCCHHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999998877766666542       678999999999999999999998


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      ++++|+||||||+....  .                       ..+.+.++..+++|+.+++.+++.++|.|++++.++|
T Consensus        97 ~~~iD~li~nAg~~~~~--~-----------------------~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~i  151 (315)
T PRK06196         97 GRRIDILINNAGVMACP--E-----------------------TRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARV  151 (315)
T ss_pred             CCCCCEEEECCCCCCCC--C-----------------------ccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeE
Confidence            99999999999975421  0                       1245677888999999999999999999987767899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+.....      +                        .....+++....|+.||+|++.|++.++.++  
T Consensus       152 V~vSS~~~~~~~~~~~------~------------------------~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~  201 (315)
T PRK06196        152 VALSSAGHRRSPIRWD------D------------------------PHFTRGYDKWLAYGQSKTANALFAVHLDKLGKD  201 (315)
T ss_pred             EEECCHHhccCCCCcc------c------------------------cCccCCCChHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999976543211000      0                        0001122445789999999999999999998  


Q ss_pred             CCcEEEEeeCCeeecCCCCCC--------------------CCCChhhhhhhhhhhhccCCC-CCcceEeccC
Q 022357          242 PKFCVNCVCPGFVKTDINFHA--------------------GILSVEEGAESPVKLALLPDG-GPTGRFFLRK  293 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~--------------------~~~~~~~~a~~~~~~~~~~~~-~~~~~~~l~~  293 (298)
                      .+|+||+|+||+|.|++....                    ...+|++.+...+.++..+.. ..+|.++..+
T Consensus       202 ~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~~~~  274 (315)
T PRK06196        202 QGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCEDC  274 (315)
T ss_pred             CCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCCccCCCCCeEeCCC
Confidence            589999999999999975321                    134688999999988876553 3456666444

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-31  Score=233.01  Aligned_cols=223  Identities=22%  Similarity=0.267  Sum_probs=178.8

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCc--HHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD--LASVSSLAD   78 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~--~~~v~~~~~   78 (298)
                      |..+++|+++||||+||||++++++|+++|++|++++|+++.++...+++...+..  .+.++++|+++  .+++.++++
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~D~~~~~~~~~~~~~~   78 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHP--EPFAIRFDLMSAEEKEFEQFAA   78 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCC--CcceEEeeecccchHHHHHHHH
Confidence            78889999999999999999999999999999999999998888777777654432  26788999986  568899999


Q ss_pred             HHHHhc-CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc
Q 022357           79 FIKTQF-GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL  157 (298)
Q Consensus        79 ~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  157 (298)
                      .+.+.+ +++|++|||||.....                      .++.+.+.+.+.+.+++|+.+++.++++++|.|.+
T Consensus        79 ~i~~~~~~~id~vi~~ag~~~~~----------------------~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~  136 (239)
T PRK08703         79 TIAEATQGKLDGIVHCAGYFYAL----------------------SPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQ  136 (239)
T ss_pred             HHHHHhCCCCCEEEEeccccccC----------------------CCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence            998888 7899999999975321                      12234578899999999999999999999999987


Q ss_pred             CCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH
Q 022357          158 SDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       158 ~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l  237 (298)
                      .+.+++|++||..+..+.                                          +....|++||+|++.|++++
T Consensus       137 ~~~~~iv~~ss~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~l  174 (239)
T PRK08703        137 SPDASVIFVGESHGETPK------------------------------------------AYWGGFGASKAALNYLCKVA  174 (239)
T ss_pred             CCCCEEEEEeccccccCC------------------------------------------CCccchHHhHHHHHHHHHHH
Confidence            777899999997765432                                          55678999999999999999


Q ss_pred             HHhC---CCcEEEEeeCCeeecCCCCCC-------CCCChhhhhhhhhhhhccCCCCCcceE
Q 022357          238 AKRY---PKFCVNCVCPGFVKTDINFHA-------GILSVEEGAESPVKLALLPDGGPTGRF  289 (298)
Q Consensus       238 a~e~---~~i~vn~v~PG~v~t~~~~~~-------~~~~~~~~a~~~~~~~~~~~~~~~~~~  289 (298)
                      +.++   ++|+||.|.||+|+|++....       .+.++++.+...+..+.......+|..
T Consensus       175 a~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  236 (239)
T PRK08703        175 ADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVLPAFVWWASAESKGRSGEI  236 (239)
T ss_pred             HHHhccCCCeEEEEEecCcccCccccccCCCCCccccCCHHHHHHHHHHHhCccccCcCCeE
Confidence            9998   269999999999999975421       123455566555665554344444443

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=8.1e-32  Score=245.01  Aligned_cols=251  Identities=22%  Similarity=0.238  Sum_probs=180.6

Q ss_pred             EEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCcc
Q 022357           10 VVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (298)
Q Consensus        10 lITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~id   88 (298)
                      |||||++|||++++++|+++| ++|++++|+.+++.+..+++...+.   .+.++++|+++.++++++++.+.+.++++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   77 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKD---SYTVMHLDLASLDSVRQFVDNFRRSGRPLD   77 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCC---eEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence            699999999999999999999 9999999998877777776653222   378899999999999999999998889999


Q ss_pred             EEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC--CCcEEEE
Q 022357           89 ILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--SPRLVNL  166 (298)
Q Consensus        89 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~g~iv~v  166 (298)
                      +||||||+......                      ..+.+.+.|++.+++|+.|++.+++.++|.|++++  .|+||++
T Consensus        78 ~lInnAG~~~~~~~----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~v  135 (308)
T PLN00015         78 VLVCNAAVYLPTAK----------------------EPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIV  135 (308)
T ss_pred             EEEECCCcCCCCCC----------------------cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence            99999997532111                      11247788999999999999999999999998765  5899999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC---CC
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY---PK  243 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~---~~  243 (298)
                      ||..+..+.....      -+......+...+.... .+.+.........+....+|++||+|+..+++.+++++   .+
T Consensus       136 sS~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~g  208 (308)
T PLN00015        136 GSITGNTNTLAGN------VPPKANLGDLRGLAGGL-NGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETG  208 (308)
T ss_pred             ecccccccccccc------CCCccchhhhhhhhccc-CCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCC
Confidence            9987753210000      00000000000000000 00000000001112345789999999999999999998   38


Q ss_pred             cEEEEeeCCee-ecCCCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          244 FCVNCVCPGFV-KTDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       244 i~vn~v~PG~v-~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      |+||+|+||+| .|++....                 ...+|++.++..+.++..+....+|.||..
T Consensus       209 i~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~  275 (308)
T PLN00015        209 ITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSW  275 (308)
T ss_pred             eEEEEecCCcccCccccccccHHHHHHHHHHHHHHhcccccHHHhhhhhhhhccccccCCCcccccc
Confidence            99999999999 78875321                 146889999999888877666677887764

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=237.02  Aligned_cols=209  Identities=22%  Similarity=0.294  Sum_probs=175.2

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +++++||||+||||++++++|+++|++|++++|+.+++.+..++++..+    ++.++++|+++.+++.++++.+.++++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dl~~~~~i~~~~~~~~~~~g   77 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA----RVSVYAADVRDADALAAAAADFIAAHG   77 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC----eeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999999999999877766666554322    388999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|++|||||........                      ...+.+.+++.+++|+.|++.+++.++|.|++++.++||+
T Consensus        78 ~id~lv~~ag~~~~~~~~----------------------~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~  135 (257)
T PRK07024         78 LPDVVIANAGISVGTLTE----------------------EREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVG  135 (257)
T ss_pred             CCCEEEECCCcCCCcccc----------------------ccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            999999999975422111                      0136788999999999999999999999998877899999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK  243 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~  243 (298)
                      +||..+..+.                                          +....|++||++++.|+++++.|+  .+
T Consensus       136 isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~l~~e~~~~g  173 (257)
T PRK07024        136 IASVAGVRGL------------------------------------------PGAGAYSASKAAAIKYLESLRVELRPAG  173 (257)
T ss_pred             EechhhcCCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhhccC
Confidence            9998876543                                          567789999999999999999998  58


Q ss_pred             cEEEEeeCCeeecCCCCCC----C-CCChhhhhhhhhhhhccCC
Q 022357          244 FCVNCVCPGFVKTDINFHA----G-ILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~~~----~-~~~~~~~a~~~~~~~~~~~  282 (298)
                      |+|++|+||+|+|++....    + ..++++.++..+..+...+
T Consensus       174 i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        174 VRVVTIAPGYIRTPMTAHNPYPMPFLMDADRFAARAARAIARGR  217 (257)
T ss_pred             cEEEEEecCCCcCchhhcCCCCCCCccCHHHHHHHHHHHHhCCC
Confidence            9999999999999975421    1 3578899888888776543

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-31  Score=236.06  Aligned_cols=223  Identities=26%  Similarity=0.312  Sum_probs=184.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.++++|||||+||||++++++|+++|++|++++|+.+++++..+.++..+.   ++.++++|+++++++.++++.+.+.
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGR---RAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999998887777777765433   3888999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc-CCCCc
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SDSPR  162 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g~  162 (298)
                      ++++|+||||||.....                       .+.+.+.+.+++.+++|+.+++.+++++.|.|.+ ++.|+
T Consensus        85 ~~~id~vi~~Ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~  141 (263)
T PRK07814         85 FGRLDIVVNNVGGTMPN-----------------------PLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGS  141 (263)
T ss_pred             cCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeE
Confidence            99999999999975332                       1223577889999999999999999999999976 45689


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|++||+++..++++++.++ 
T Consensus       142 iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~e~~  179 (263)
T PRK07814        142 VINISSTMGRLAG------------------------------------------RGFAAYGTAKAALAHYTRLAALDLC  179 (263)
T ss_pred             EEEEccccccCCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHC
Confidence            9999998776433                                          567889999999999999999998 


Q ss_pred             CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          242 PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      ++|+||+|+||++.|++....                 ...++++.++..+..+........|..+....
T Consensus       180 ~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~  249 (263)
T PRK07814        180 PRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDG  249 (263)
T ss_pred             CCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECC
Confidence            689999999999999864310                 12467788888877776555556666665543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=2.4e-31  Score=243.24  Aligned_cols=260  Identities=23%  Similarity=0.273  Sum_probs=185.8

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+|+++||||++|||++++++|+++|++|++++|+.+++.+..+++....   ..+.++++|+++.++++++++.+
T Consensus         1 m~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~   77 (322)
T PRK07453          1 MSQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPP---DSYTIIHIDLGDLDSVRRFVDDF   77 (322)
T ss_pred             CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccC---CceEEEEecCCCHHHHHHHHHHH
Confidence            777889999999999999999999999999999999999888877777775322   23888999999999999999998


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||+.......                      ...+.+.++..+++|+.|++++++.++|.|++++.
T Consensus        78 ~~~~~~iD~li~nAg~~~~~~~~----------------------~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~  135 (322)
T PRK07453         78 RALGKPLDALVCNAAVYMPLLKE----------------------PLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPA  135 (322)
T ss_pred             HHhCCCccEEEECCcccCCCCCC----------------------CCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCC
Confidence            77778999999999975321100                      12467889999999999999999999999987653


Q ss_pred             --CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          161 --PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       161 --g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                        +|||++||..+........    ..-.......+....... +.  .+....+...+.....|+.||+|+..+++.++
T Consensus       136 ~~~riV~vsS~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la  208 (322)
T PRK07453        136 PDPRLVILGTVTANPKELGGK----IPIPAPADLGDLSGFEAG-FK--APISMADGKKFKPGKAYKDSKLCNMLTMRELH  208 (322)
T ss_pred             CCceEEEEcccccCccccCCc----cCCCCccchhhhhcchhc-cc--ccccccCccCCCccchhhHhHHHHHHHHHHHH
Confidence              6999999987643210000    000000000000000000 00  00000011223445789999999999999999


Q ss_pred             HhC---CCcEEEEeeCCee-ecCCCCCCC-----------------CCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          239 KRY---PKFCVNCVCPGFV-KTDINFHAG-----------------ILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       239 ~e~---~~i~vn~v~PG~v-~t~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +++   .+|+||+|+||.| .|++.+...                 ..+++.+++..+.++..+....+|.||..
T Consensus       209 ~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~  283 (322)
T PRK07453        209 RRYHESTGITFSSLYPGCVADTPLFRNTPPLFQKLFPWFQKNITGGYVSQELAGERVAQVVADPEFAQSGVHWSW  283 (322)
T ss_pred             HhhcccCCeEEEEecCCcccCCcccccCCHHHHHHHHHHHHHHhhceecHHHHhhHHHHhhcCcccCCCCceeec
Confidence            998   3899999999999 588754321                 24666777777777777766678888863

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-31  Score=234.64  Aligned_cols=222  Identities=26%  Similarity=0.274  Sum_probs=182.4

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEE-EecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +.+++++||||+||||++++++|+++|++|++ ..|+..+.++..++++..+..   +.++.+|+++.++++++++++.+
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   78 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRK---ALAVKANVGDVEKIKEMFAQIDE   78 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCe---EEEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999876 578877777777777765433   88899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||.....+                       +.+.+.+.+.+.+++|+.+++.++++++|.|++++.|+
T Consensus        79 ~~~~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~  135 (250)
T PRK08063         79 EFGRLDVFVNNAASGVLRP-----------------------AMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGK  135 (250)
T ss_pred             HcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeE
Confidence            9999999999999754321                       22357788889999999999999999999998877799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+++++|+++++.++ 
T Consensus       136 iv~~sS~~~~~~~------------------------------------------~~~~~y~~sK~a~~~~~~~~~~~~~  173 (250)
T PRK08063        136 IISLSSLGSIRYL------------------------------------------ENYTTVGVSKAALEALTRYLAVELA  173 (250)
T ss_pred             EEEEcchhhccCC------------------------------------------CCccHHHHHHHHHHHHHHHHHHHHh
Confidence            9999997654332                                          456789999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                       .+|++|+|+||++.|++....                 ...++++.++..+..+..+....+|..+..+
T Consensus       174 ~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~  243 (250)
T PRK08063        174 PKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVD  243 (250)
T ss_pred             HhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEEC
Confidence             589999999999999864321                 2457788888887777665555556665544

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-31  Score=231.67  Aligned_cols=224  Identities=26%  Similarity=0.296  Sum_probs=185.9

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |...++|+++||||+||||++++++|+++|++|++++|++++.....++++..+.   ++.++++|+++.+++.++++.+
T Consensus         1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~   77 (241)
T PRK07454          1 MSLNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGV---KAAAYSIDLSNPEAIAPGIAEL   77 (241)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCC---cEEEEEccCCCHHHHHHHHHHH
Confidence            6666779999999999999999999999999999999998877777777765433   3888999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .++++++|++|||||.....                       .+.+.+.+.+++.+++|+.+++.+++.++|.|++++.
T Consensus        78 ~~~~~~id~lv~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  134 (241)
T PRK07454         78 LEQFGCPDVLINNAGMAYTG-----------------------PLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGG  134 (241)
T ss_pred             HHHcCCCCEEEECCCccCCC-----------------------chhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999976432                       1223577889999999999999999999999987777


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+..+.                                          +....|+++|++++.++++++.+
T Consensus       135 ~~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~~~~~~~~~~a~e  172 (241)
T PRK07454        135 GLIINVSSIAARNAF------------------------------------------PQWGAYCVSKAALAAFTKCLAEE  172 (241)
T ss_pred             cEEEEEccHHhCcCC------------------------------------------CCccHHHHHHHHHHHHHHHHHHH
Confidence            999999997765332                                          55688999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCC---------CCCCChhhhhhhhhhhhccCCC-CCcceEecc
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFH---------AGILSVEEGAESPVKLALLPDG-GPTGRFFLR  292 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~---------~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~l~  292 (298)
                      +  .++++++|.||+++|++...         ....++++.++..+.++..++. ......++.
T Consensus       173 ~~~~gi~v~~i~pg~i~t~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~~~~~~~~  236 (241)
T PRK07454        173 ERSHGIRVCTITLGAVNTPLWDTETVQADFDRSAMLSPEQVAQTILHLAQLPPSAVIEDLTLMP  236 (241)
T ss_pred             hhhhCCEEEEEecCcccCCcccccccccccccccCCCHHHHHHHHHHHHcCCccceeeeEEeec
Confidence            8  49999999999999997432         1246889999999998876643 333343433

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-31  Score=243.50  Aligned_cols=235  Identities=27%  Similarity=0.328  Sum_probs=181.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+++.+|+++||||++|||+++|++|+++|++|++++|+.++..+..+++..... ...+.++++|+++.++++++++++
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~   89 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATP-GADVTLQELDLTSLASVRAAADAL   89 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999998877777777664321 123788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||...+..                         ..+.+.++..+++|+.|++.+++.++|.|++.+.
T Consensus        90 ~~~~~~iD~li~nAg~~~~~~-------------------------~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~  144 (306)
T PRK06197         90 RAAYPRIDLLINNAGVMYTPK-------------------------QTTADGFELQFGTNHLGHFALTGLLLDRLLPVPG  144 (306)
T ss_pred             HhhCCCCCEEEECCccccCCC-------------------------ccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCC
Confidence            999999999999999764320                         1345667788999999999999999999987777


Q ss_pred             CcEEEEccCcccccC-CchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          161 PRLVNLSSYVSALKD-LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       161 g~iv~vsS~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      ++||++||..+.... .+.      .+                        ......++....|+.||+|+++|++.++.
T Consensus       145 ~~iV~vSS~~~~~~~~~~~------~~------------------------~~~~~~~~~~~~Y~~SK~a~~~~~~~la~  194 (306)
T PRK06197        145 SRVVTVSSGGHRIRAAIHF------DD------------------------LQWERRYNRVAAYGQSKLANLLFTYELQR  194 (306)
T ss_pred             CEEEEECCHHHhccCCCCc------cc------------------------cCcccCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            899999997654311 000      00                        00011224467899999999999999999


Q ss_pred             hC--CCcEEEE--eeCCeeecCCCCCCC--------------CCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          240 RY--PKFCVNC--VCPGFVKTDINFHAG--------------ILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       240 e~--~~i~vn~--v~PG~v~t~~~~~~~--------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      ++  .+++|++  ++||+|.|++....+              ..++++++...+.++..+. ..+|.+|..
T Consensus       195 ~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~g~~~~~  264 (306)
T PRK06197        195 RLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLLAQSPEMGALPTLRAATDPA-VRGGQYYGP  264 (306)
T ss_pred             HhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhhhcCCHHHHHHHHHHHhcCCC-cCCCeEEcc
Confidence            98  5776665  479999999865431              2467778888887777554 346777754

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=3e-31  Score=234.67  Aligned_cols=219  Identities=25%  Similarity=0.289  Sum_probs=174.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +|++|||||++|||++++++|+++|++|+++++ +.+.++...+++...+..   +.++++|+++.++++++++++.+.+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVR---AEIRQLDLSDLPEGAQALDKLIQRL   78 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCc---eEEEEccCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999998875 445566666666654433   8899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC-CCCcE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRL  163 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~i  163 (298)
                      +++|++|||||......                       +.+.+.+.+++.+++|+.+++.+++++.+.|.++ +.|+|
T Consensus        79 ~~id~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~i  135 (256)
T PRK12743         79 GRIDVLVNNAGAMTKAP-----------------------FLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRI  135 (256)
T ss_pred             CCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEE
Confidence            99999999999864321                       1235788999999999999999999999999654 35899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+.                                          +....|+++|+|+.+++++++.++  
T Consensus       136 i~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~l~~~la~~~~~  173 (256)
T PRK12743        136 INITSVHEHTPL------------------------------------------PGASAYTAAKHALGGLTKAMALELVE  173 (256)
T ss_pred             EEEeeccccCCC------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhhh
Confidence            999997665432                                          557899999999999999999998  


Q ss_pred             CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      .+|+||.|+||+++|++....               ...++++.+...+.++.......+|.++..
T Consensus       174 ~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~  239 (256)
T PRK12743        174 HGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSLIV  239 (256)
T ss_pred             hCeEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEE
Confidence            489999999999999875321               123566666666666554444444544443

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-31  Score=235.61  Aligned_cols=210  Identities=21%  Similarity=0.207  Sum_probs=173.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchh-hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKR-GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++++||||++|||+++|++|+++| ++|++++|+++. +++..++++..+..  .+.++++|+++.++++++++.+.+
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~--~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGAS--SVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCC--ceEEEEecCCChHHHHHHHHHHHh
Confidence            46899999999999999999999995 999999999885 77777888765432  388999999999999999988876


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                       ++++|++|||+|.....                  +..|     .+.+...+.+++|+.+++.+++.++|.|++++.++
T Consensus        85 -~g~id~li~~ag~~~~~------------------~~~~-----~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~  140 (253)
T PRK07904         85 -GGDVDVAIVAFGLLGDA------------------EELW-----QNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQ  140 (253)
T ss_pred             -cCCCCEEEEeeecCCch------------------hhcc-----cCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCce
Confidence             58999999999985321                  0111     13344557899999999999999999999887899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+.+|+++++.|+ 
T Consensus       141 iv~isS~~g~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~l~~el~  178 (253)
T PRK07904        141 IIAMSSVAGERVR------------------------------------------RSNFVYGSTKAGLDGFYLGLGEALR  178 (253)
T ss_pred             EEEEechhhcCCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHh
Confidence            9999998765332                                          456789999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC----CCCChhhhhhhhhhhhccCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA----GILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~----~~~~~~~~a~~~~~~~~~~~  282 (298)
                       .+|+|++|+||+++|++....    ...++++.|+..+..+...+
T Consensus       179 ~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~A~~i~~~~~~~~  224 (253)
T PRK07904        179 EYGVRVLVVRPGQVRTRMSAHAKEAPLTVDKEDVAKLAVTAVAKGK  224 (253)
T ss_pred             hcCCEEEEEeeCceecchhccCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence             589999999999999976542    24688999999988887544

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.1e-32  Score=239.08  Aligned_cols=225  Identities=23%  Similarity=0.239  Sum_probs=168.4

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      +++++|++|||||+||||++++++|+++|++|++++++ ....+....++   .   .++.++++|+++.++++++++.+
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~---~~~~~~~~D~~~~~~~~~~~~~~   74 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---G---DRAIALQADVTDREQVQAMFATA   74 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---C---CceEEEEcCCCCHHHHHHHHHHH
Confidence            35678999999999999999999999999999987654 43433333332   1   13888999999999999999999


Q ss_pred             HHhcCC-ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           81 KTQFGK-LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        81 ~~~~g~-id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      .+.+++ +|++|||||........                 .-..+.+.+.+.+.+.+++|+.+++.++++++|.|.+++
T Consensus        75 ~~~~g~~id~li~~ag~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  137 (253)
T PRK08642         75 TEHFGKPITTVVNNALADFSFDGD-----------------ARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG  137 (253)
T ss_pred             HHHhCCCCeEEEECCCcccccccc-----------------CCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC
Confidence            988887 99999999864211000                 001223457788999999999999999999999998776


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          .....|++||+|+++|+++++.
T Consensus       138 ~g~iv~iss~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~l~~~la~  175 (253)
T PRK08642        138 FGRIINIGTNLFQNPV------------------------------------------VPYHDYTTAKAALLGLTRNLAA  175 (253)
T ss_pred             CeEEEEECCccccCCC------------------------------------------CCccchHHHHHHHHHHHHHHHH
Confidence            7999999996543221                                          3456899999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      ++  .+|+||+|+||+++|+.....                ...+|++.+...+.++.......+|..+.
T Consensus       176 ~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~  245 (253)
T PRK08642        176 ELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQNLV  245 (253)
T ss_pred             HhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCEEE
Confidence            98  589999999999999754211                12355555555555554433344444443

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.8e-31  Score=241.31  Aligned_cols=221  Identities=25%  Similarity=0.251  Sum_probs=176.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++.+|++|||||++|||+++|++|+++|++|++.+++. ...+...++++..+.   ++.++++|+++.++++++++.+.
T Consensus         9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~---~~~~~~~Dv~d~~~~~~~~~~~~   85 (306)
T PRK07792          9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGA---KAVAVAGDISQRATADELVATAV   85 (306)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCC---eEEEEeCCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999998754 456667777765443   38899999999999999999998


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC--
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--  159 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--  159 (298)
                      + +|++|+||||||......                       +.+.+.++|++.+++|+.+++.+++++.|+|+++.  
T Consensus        86 ~-~g~iD~li~nAG~~~~~~-----------------------~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~  141 (306)
T PRK07792         86 G-LGGLDIVVNNAGITRDRM-----------------------LFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKA  141 (306)
T ss_pred             H-hCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcc
Confidence            8 999999999999864431                       12357788999999999999999999999986431  


Q ss_pred             -----CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHH
Q 022357          160 -----SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT  234 (298)
Q Consensus       160 -----~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~  234 (298)
                           .|+||++||..+..+.                                          ++...|++||+|+++|+
T Consensus       142 ~~~~~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~  179 (306)
T PRK07792        142 AGGPVYGRIVNTSSEAGLVGP------------------------------------------VGQANYGAAKAGITALT  179 (306)
T ss_pred             cCCCCCcEEEEECCcccccCC------------------------------------------CCCchHHHHHHHHHHHH
Confidence                 3799999998776443                                          56778999999999999


Q ss_pred             HHHHHhC--CCcEEEEeeCCeeecCCCCC------------CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          235 RILAKRY--PKFCVNCVCPGFVKTDINFH------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       235 ~~la~e~--~~i~vn~v~PG~v~t~~~~~------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      ++++.++  .||+||+|+||. .|++...            ...++|++.+.....++.......+|.+|...
T Consensus       180 ~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~  251 (306)
T PRK07792        180 LSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDVEAGGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVY  251 (306)
T ss_pred             HHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchhhhhccCCCCHHHHHHHHHHHcCccccCCCCCEEEEc
Confidence            9999998  589999999994 7776421            12346788887777766544444555555443

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-31  Score=231.82  Aligned_cols=226  Identities=27%  Similarity=0.284  Sum_probs=188.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+|+++||||+||||++++++|+++|++|++++|+++++....++++..+.   ++.++++|+++.++++++++.+
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~   78 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGG---RAHAIAADLADPASVQRFFDAA   78 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHH
Confidence            5667789999999999999999999999999999999998887777777765443   3889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|++|||+|......                       +.+.+.+.+++.+++|+.+++.+++.+.|.|.+++.
T Consensus        79 ~~~~~~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  135 (250)
T PRK12939         79 AAALGGLDGLVNNAGITNSKS-----------------------ATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGR  135 (250)
T ss_pred             HHHcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence            999999999999999764321                       223577888999999999999999999999987777


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |++|++||..+..+.                                          +....|+++|++++.+++.++.+
T Consensus       136 g~iv~isS~~~~~~~------------------------------------------~~~~~y~~sK~~~~~~~~~l~~~  173 (250)
T PRK12939        136 GRIVNLASDTALWGA------------------------------------------PKLGAYVASKGAVIGMTRSLARE  173 (250)
T ss_pred             eEEEEECchhhccCC------------------------------------------CCcchHHHHHHHHHHHHHHHHHH
Confidence            899999997765443                                          45678999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      +  .+|+|+.|+||+++|++....                .+.++++.++..+.+...+.+...|.++..+.
T Consensus       174 ~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~g  245 (250)
T PRK12939        174 LGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNG  245 (250)
T ss_pred             HhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence            8  589999999999999976321                13577888888888776555555666665544

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=2.1e-31  Score=235.77  Aligned_cols=189  Identities=21%  Similarity=0.198  Sum_probs=156.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHH----CCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            8 YAVVTGSNKGIGFETVRQLAS----KGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~----~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++||||++|||+++|++|++    +|++|++++|+.+.+++..++++.... ...+.++++|+++.++++++++.+.+.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERS-GLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCC-CceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            689999999999999999997    799999999999888888888875321 123888999999999999999999887


Q ss_pred             cCCc----cEEEEccccCCccc-ccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           84 FGKL----DILANNAGIASVKF-DMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        84 ~g~i----d~lv~nAg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                      ++.+    |+||||||...... ...                     ...+.+.+++.+++|+.+++++++.++|.|+++
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~---------------------~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~  139 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFV---------------------DLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDS  139 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccc---------------------cCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhc
Confidence            7643    69999999753211 000                     002467889999999999999999999999865


Q ss_pred             C--CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHH
Q 022357          159 D--SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI  236 (298)
Q Consensus       159 ~--~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~  236 (298)
                      +  .++||++||..+..+.                                          ++...|++||+|+++|+++
T Consensus       140 ~~~~~~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~  177 (256)
T TIGR01500       140 PGLNRTVVNISSLCAIQPF------------------------------------------KGWALYCAGKAARDMLFQV  177 (256)
T ss_pred             CCCCCEEEEECCHHhCCCC------------------------------------------CCchHHHHHHHHHHHHHHH
Confidence            3  4799999998765433                                          6678899999999999999


Q ss_pred             HHHhC--CCcEEEEeeCCeeecCCCC
Q 022357          237 LAKRY--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       237 la~e~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      |+.|+  .+|+||+|+||+|+|++..
T Consensus       178 la~e~~~~~i~v~~v~PG~v~T~~~~  203 (256)
T TIGR01500       178 LALEEKNPNVRVLNYAPGVLDTDMQQ  203 (256)
T ss_pred             HHHHhcCCCeEEEEecCCcccchHHH
Confidence            99998  5899999999999999753

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=7.6e-32  Score=222.59  Aligned_cols=185  Identities=25%  Similarity=0.331  Sum_probs=164.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.|-++|||||++|||+++|++|.+.|-+||+++|++.++++.+++.+.       ++...||+.|.++++.+++.+.+
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~-------~~t~v~Dv~d~~~~~~lvewLkk   74 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE-------IHTEVCDVADRDSRRELVEWLKK   74 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcc-------hheeeecccchhhHHHHHHHHHh
Confidence            45788999999999999999999999999999999999998888777554       78899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      +|+.+++||||||+.......                     ..+...+...+.+.+|+.+|++|++.++|++.+++.+.
T Consensus        75 ~~P~lNvliNNAGIqr~~dlt---------------------~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~  133 (245)
T COG3967          75 EYPNLNVLINNAGIQRNEDLT---------------------GAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEAT  133 (245)
T ss_pred             hCCchheeeecccccchhhcc---------------------CCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCce
Confidence            999999999999998543211                     11245677788899999999999999999999998999


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||-.+..+.                                          ...+.|+++|+|++.|+.+|+..+ 
T Consensus       134 IInVSSGLafvPm------------------------------------------~~~PvYcaTKAaiHsyt~aLR~Qlk  171 (245)
T COG3967         134 IINVSSGLAFVPM------------------------------------------ASTPVYCATKAAIHSYTLALREQLK  171 (245)
T ss_pred             EEEeccccccCcc------------------------------------------cccccchhhHHHHHHHHHHHHHHhh
Confidence            9999998887664                                          557899999999999999999888 


Q ss_pred             -CCcEEEEeeCCeeecC
Q 022357          242 -PKFCVNCVCPGFVKTD  257 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~  257 (298)
                       .+|.|.-+.|..|+|+
T Consensus       172 ~t~veVIE~~PP~V~t~  188 (245)
T COG3967         172 DTSVEVIELAPPLVDTT  188 (245)
T ss_pred             hcceEEEEecCCceecC
Confidence             4899999999999996

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=1.8e-31  Score=239.73  Aligned_cols=191  Identities=30%  Similarity=0.396  Sum_probs=165.6

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+.+|++|||||+||||++++++|+++|++|++++|+.+.+.+..+++...+.   .+.++++|+++.++++++++.+
T Consensus         1 m~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~   77 (287)
T PRK06194          1 MKDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGA---EVLGVRTDVSDAAQVEALADAA   77 (287)
T ss_pred             CcCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHHH
Confidence            7788899999999999999999999999999999999998777777777765432   3888999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||......                       +.+.+.+.+++.+++|+.|++.++++++|.|.++..
T Consensus        78 ~~~~g~id~vi~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~  134 (287)
T PRK06194         78 LERFGAVHLLFNNAGVGAGGL-----------------------VWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAE  134 (287)
T ss_pred             HHHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999875432                       123577889999999999999999999999976543


Q ss_pred             ------CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHH
Q 022357          161 ------PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT  234 (298)
Q Consensus       161 ------g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~  234 (298)
                            |+||++||..+..+.                                          +....|++||++++.|+
T Consensus       135 ~~~~~~g~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~  172 (287)
T PRK06194        135 KDPAYEGHIVNTASMAGLLAP------------------------------------------PAMGIYNVSKHAVVSLT  172 (287)
T ss_pred             CCCCCCeEEEEeCChhhccCC------------------------------------------CCCcchHHHHHHHHHHH
Confidence                  799999998776443                                          55678999999999999


Q ss_pred             HHHHHhC----CCcEEEEeeCCeeecCCC
Q 022357          235 RILAKRY----PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       235 ~~la~e~----~~i~vn~v~PG~v~t~~~  259 (298)
                      ++++.++    .+||++.|+||+|.|++.
T Consensus       173 ~~l~~e~~~~~~~irv~~v~pg~i~t~~~  201 (287)
T PRK06194        173 ETLYQDLSLVTDQVGASVLCPYFVPTGIW  201 (287)
T ss_pred             HHHHHHHhhcCCCeEEEEEEeCcccCccc
Confidence            9999987    369999999999999875

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-32  Score=239.78  Aligned_cols=183  Identities=28%  Similarity=0.345  Sum_probs=155.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++|++|||||++|||++++++|+++|++|++++|++...         ..   ..+.++++|+++.++++++++++.+
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~---~~~~~~~~D~~~~~~~~~~~~~~~~   73 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LP---EGVEFVAADLTTAEGCAAVARAVLE   73 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cC---CceeEEecCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999986431         11   1278899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||......                     ..+...+.+.+++.+++|+.+++.+++.++|.|++++.|+
T Consensus        74 ~~~~id~vi~~ag~~~~~~---------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~  132 (260)
T PRK06523         74 RLGGVDILVHVLGGSSAPA---------------------GGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGV  132 (260)
T ss_pred             HcCCCCEEEECCcccccCC---------------------CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcE
Confidence            9999999999999653210                     1122357788999999999999999999999998777789


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                         +.....|++||+++++|+++++.++ 
T Consensus       133 ii~isS~~~~~~~-----------------------------------------~~~~~~Y~~sK~a~~~l~~~~a~~~~  171 (260)
T PRK06523        133 IIHVTSIQRRLPL-----------------------------------------PESTTAYAAAKAALSTYSKSLSKEVA  171 (260)
T ss_pred             EEEEecccccCCC-----------------------------------------CCCcchhHHHHHHHHHHHHHHHHHHh
Confidence            9999997765331                                         1356889999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCC
Q 022357          242 -PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~  259 (298)
                       .+|+||+|+||+|+|++.
T Consensus       172 ~~gi~v~~i~Pg~v~t~~~  190 (260)
T PRK06523        172 PKGVRVNTVSPGWIETEAA  190 (260)
T ss_pred             hcCcEEEEEecCcccCccH
Confidence             589999999999999975

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-31  Score=235.60  Aligned_cols=222  Identities=23%  Similarity=0.241  Sum_probs=176.7

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+++|+++||||++|||++++++|+++|++|++++|+.+.+....+++...+..   +.++++|+++.++++++++.+
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~i~~~~~~~   80 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPE---GLGVSADVRDYAAVEAAFAQI   80 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCc---eEEEECCCCCHHHHHHHHHHH
Confidence            56678899999999999999999999999999999999988777766666654332   688999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|++|||||.....                       .+.+.+.+.+++.+++|+.+++.++++++|.|+++ +
T Consensus        81 ~~~~~~iD~vi~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~  136 (264)
T PRK07576         81 ADEFGPIDVLVSGAAGNFPA-----------------------PAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-G  136 (264)
T ss_pred             HHHcCCCCEEEECCCCCCCC-----------------------ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-C
Confidence            99999999999999865322                       12235778899999999999999999999999754 4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          ++...|+++|+|++.|+++++.+
T Consensus       137 g~iv~iss~~~~~~~------------------------------------------~~~~~Y~asK~a~~~l~~~la~e  174 (264)
T PRK07576        137 ASIIQISAPQAFVPM------------------------------------------PMQAHVCAAKAGVDMLTRTLALE  174 (264)
T ss_pred             CEEEEECChhhccCC------------------------------------------CCccHHHHHHHHHHHHHHHHHHH
Confidence            899999997765432                                          66789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeee-cCCCCC-----------------CCCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          241 Y--PKFCVNCVCPGFVK-TDINFH-----------------AGILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~-t~~~~~-----------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      +  .+|+|+.|+||+++ |+....                 .....+++.++..+..+..+....+|..+.
T Consensus       175 ~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  245 (264)
T PRK07576        175 WGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYITGVVLP  245 (264)
T ss_pred             hhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCccCCEEE
Confidence            8  68999999999997 542211                 012345666666666665444444444443

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.4e-33  Score=223.25  Aligned_cols=221  Identities=24%  Similarity=0.201  Sum_probs=186.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++.|+++++||+.-|||+++++.|++.|++|+...|++..+..++++....      +.+++.|++.++.+.+.+..+  
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~------I~Pi~~Dls~wea~~~~l~~v--   75 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSL------IIPIVGDLSAWEALFKLLVPV--   75 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcc------eeeeEecccHHHHHHHhhccc--
Confidence            468999999999999999999999999999999999999999888886643      889999999988777665443  


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhh-hccCCCC
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL-LELSDSP  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~-~~~~~~g  161 (298)
                        +++|.+|||||+.--                       +++.+.+.+.++..|++|+.+.+++.|....- +.++..|
T Consensus        76 --~pidgLVNNAgvA~~-----------------------~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~G  130 (245)
T KOG1207|consen   76 --FPIDGLVNNAGVATN-----------------------HPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKG  130 (245)
T ss_pred             --Cchhhhhccchhhhc-----------------------chHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCc
Confidence              689999999998743                       35556799999999999999999999995443 3344568


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      .||++||.++.++.                                          .+++.|+++|+|+.+++|+||.|+
T Consensus       131 aIVNvSSqas~R~~------------------------------------------~nHtvYcatKaALDmlTk~lAlEL  168 (245)
T KOG1207|consen  131 AIVNVSSQASIRPL------------------------------------------DNHTVYCATKAALDMLTKCLALEL  168 (245)
T ss_pred             eEEEecchhccccc------------------------------------------CCceEEeecHHHHHHHHHHHHHhh
Confidence            99999998887654                                          778999999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCC---CCCCChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFH---AGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .+||||+|.|-.|-|+|.+.   .+........+.|+++....++...+..|+.|+.+++
T Consensus       169 Gp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssm  230 (245)
T KOG1207|consen  169 GPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSM  230 (245)
T ss_pred             CcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcCc
Confidence              48999999999999999743   2333334456778888888889999999999988764

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-31  Score=238.10  Aligned_cols=182  Identities=26%  Similarity=0.309  Sum_probs=156.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+|+++||||+||||++++++|+++|++|++++|+++.+..+    ...     .+.++.+|+++.++++++++.+.+.+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l----~~~-----~~~~~~~Dl~d~~~~~~~~~~~~~~~   73 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL----EAE-----GLEAFQLDYAEPESIAALVAQVLELS   73 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HHC-----CceEEEccCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999997765443    222     16788999999999999999987766


Q ss_pred             -CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           85 -GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        85 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                       +++|+||||||......                       +.+.+.+.+++.+++|+.|++.+++.++|.|++++.|+|
T Consensus        74 ~g~id~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~i  130 (277)
T PRK05993         74 GGRLDALFNNGAYGQPGA-----------------------VEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRI  130 (277)
T ss_pred             CCCccEEEECCCcCCCCC-----------------------cccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEE
Confidence             68999999999865432                       223577889999999999999999999999988878999


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+.                                          +....|++||+|+++|+++++.|+  
T Consensus       131 v~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~l~~el~~  168 (277)
T PRK05993        131 VQCSSILGLVPM------------------------------------------KYRGAYNASKFAIEGLSLTLRMELQG  168 (277)
T ss_pred             EEECChhhcCCC------------------------------------------CccchHHHHHHHHHHHHHHHHHHhhh
Confidence            999998776433                                          557899999999999999999998  


Q ss_pred             CCcEEEEeeCCeeecCCCC
Q 022357          242 PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~  260 (298)
                      .||+|++|+||+|+|++..
T Consensus       169 ~gi~v~~v~Pg~v~T~~~~  187 (277)
T PRK05993        169 SGIHVSLIEPGPIETRFRA  187 (277)
T ss_pred             hCCEEEEEecCCccCchhh
Confidence            5899999999999998753

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=7.2e-32  Score=236.86  Aligned_cols=189  Identities=28%  Similarity=0.342  Sum_probs=159.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +++|+++||||++|||++++++|+++|++|++.. |+.....+..+++...+..   +..+.+|+++.++++++++++.+
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   77 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFD---FIASEGNVGDWDSTKAAFDKVKA   77 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHHHH
Confidence            3579999999999999999999999999998854 4455555556666544332   77889999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||.....                       ++.+.+.+.+++.+++|+.+++.+++.++|.|++++.++
T Consensus        78 ~~~~id~li~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~  134 (246)
T PRK12938         78 EVGEIDVLVNNAGITRDV-----------------------VFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGR  134 (246)
T ss_pred             HhCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeE
Confidence            999999999999976432                       122357889999999999999999999999998777789


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|+++|+|++.|+++++.++ 
T Consensus       135 iv~isS~~~~~~~------------------------------------------~~~~~y~~sK~a~~~~~~~l~~~~~  172 (246)
T PRK12938        135 IINISSVNGQKGQ------------------------------------------FGQTNYSTAKAGIHGFTMSLAQEVA  172 (246)
T ss_pred             EEEEechhccCCC------------------------------------------CCChhHHHHHHHHHHHHHHHHHHhh
Confidence            9999997765432                                          557889999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~  260 (298)
                       .+|++|+|+||+++|++..
T Consensus       173 ~~gi~v~~i~pg~~~t~~~~  192 (246)
T PRK12938        173 TKGVTVNTVSPGYIGTDMVK  192 (246)
T ss_pred             hhCeEEEEEEecccCCchhh
Confidence             5899999999999999753

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-31  Score=231.07  Aligned_cols=223  Identities=25%  Similarity=0.268  Sum_probs=179.6

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+++|+++||||+||||++++++|+++|++|++++|++.......+++.....   .+.++.+|+++.++++.+++.+
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~   77 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGG---TAIAVQVDVSDPDSAKAMADAT   77 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEcCCCCHHHHHHHHHHH
Confidence            7788999999999999999999999999999999999998777676666664432   2778899999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||......                    .+.+.+.+.+.+++.+++|+.+++.++++++|.|.+.+.
T Consensus        78 ~~~~~~id~vi~~ag~~~~~~--------------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  137 (250)
T PRK07774         78 VSAFGGIDYLVNNAAIYGGMK--------------------LDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGG  137 (250)
T ss_pred             HHHhCCCCEEEECCCCcCCCC--------------------CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCC
Confidence            999999999999999864211                    112233577889999999999999999999999987777


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+.                                             ...+.|++||+|++.++++++.+
T Consensus       138 ~~iv~~sS~~~~---------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~  172 (250)
T PRK07774        138 GAIVNQSSTAAW---------------------------------------------LYSNFYGLAKVGLNGLTQQLARE  172 (250)
T ss_pred             cEEEEEeccccc---------------------------------------------CCccccHHHHHHHHHHHHHHHHH
Confidence            899999997654                                             22468999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      +  .+|+++.|+||+++|++....                ...++++.++..+..+..+.....+..|.
T Consensus       173 ~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~  241 (250)
T PRK07774        173 LGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQIFN  241 (250)
T ss_pred             hCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcCCCEEE
Confidence            8  589999999999999976431                12356777777666665433333444333

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.6e-31  Score=260.06  Aligned_cols=211  Identities=27%  Similarity=0.334  Sum_probs=180.6

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.++++|||||+||||++++++|+++|++|++++|+.+++++..+.++..+..   +.++++|+++.++++++++.+.+.
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~~~~~~~~~~~~  389 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAV---AHAYRVDVSDADAMEAFAEWVRAE  389 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---EEEEEcCCCCHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999998888888888765543   889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-CCc
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPR  162 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~  162 (298)
                      +|++|+||||||+.....                       +.+.+.+++++.+++|+.|+++++++++|.|++++ .|+
T Consensus       390 ~g~id~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~  446 (582)
T PRK05855        390 HGVPDIVVNNAGIGMAGG-----------------------FLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGH  446 (582)
T ss_pred             cCCCcEEEECCccCCCCC-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcE
Confidence            999999999999864332                       22357889999999999999999999999998765 489


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|++||+|+++|+++++.|+ 
T Consensus       447 iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~l~~e~~  484 (582)
T PRK05855        447 IVNVASAAAYAPS------------------------------------------RSLPAYATSKAAVLMLSECLRAELA  484 (582)
T ss_pred             EEEECChhhccCC------------------------------------------CCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            9999998876543                                          667899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC-----------------------CCCChhhhhhhhhhhhccCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA-----------------------GILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~-----------------------~~~~~~~~a~~~~~~~~~~~  282 (298)
                       .||+||+|+||+|+|++....                       ...+|++.++..+..+...+
T Consensus       485 ~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~~  549 (582)
T PRK05855        485 AAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRNK  549 (582)
T ss_pred             ccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcCC
Confidence             499999999999999875431                       12478888888888776543

>PRK09186 flagellin modification protein A; Provisional

Probab=99.98  E-value=7.1e-31  Score=231.70  Aligned_cols=238  Identities=22%  Similarity=0.186  Sum_probs=181.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++...+++...... ..+.++++|+++.++++++++.+.+
T Consensus         1 ~~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (256)
T PRK09186          1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKS-KKLSLVELDITDQESLEEFLSKSAE   79 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCC-CceeEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999988888777777543211 1266779999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||......                    ...+.+.+.+.+.+.+++|+.+++.++++++|.|++++.++
T Consensus        80 ~~~~id~vi~~A~~~~~~~--------------------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~  139 (256)
T PRK09186         80 KYGKIDGAVNCAYPRNKDY--------------------GKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGN  139 (256)
T ss_pred             HcCCccEEEECCccccccc--------------------cCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCce
Confidence            9999999999997643210                    01223457788999999999999999999999998777789


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+....                                ..+.........|++||+++++|+++++.++ 
T Consensus       140 iv~~sS~~~~~~~~~~--------------------------------~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~  187 (256)
T PRK09186        140 LVNISSIYGVVAPKFE--------------------------------IYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFK  187 (256)
T ss_pred             EEEEechhhhccccch--------------------------------hccccccCCcchhHHHHHHHHHHHHHHHHHhC
Confidence            9999997765432000                                0011111223479999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCC-----------CCCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 -PKFCVNCVCPGFVKTDINF-----------HAGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~-----------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                       .+|+||.|+||.+.++...           .....++++.++..+..+.......+|..+..+
T Consensus       188 ~~~i~v~~i~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~  251 (256)
T PRK09186        188 DSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVD  251 (256)
T ss_pred             cCCeEEEEEecccccCCCCHHHHHHHHhcCCccCCCCHHHhhhhHhheeccccccccCceEEec
Confidence             5899999999999876421           123467777777777777654444455554433

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.98  E-value=1.8e-32  Score=229.65  Aligned_cols=205  Identities=31%  Similarity=0.395  Sum_probs=173.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++.||.+++|||.||||++++++|+++|.++.++..+.+. .+..+++++.... ..+.+++||+++..+++++++++..
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~-~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPS-VSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCC-ceEEEEEeccccHHHHHHHHHHHHH
Confidence            5679999999999999999999999999998877776665 4445556543322 2499999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC---
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---  159 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---  159 (298)
                      ++|.||++||+||+.                               +..+|+.++++|+.|.+.-+...+|+|.++.   
T Consensus        80 ~fg~iDIlINgAGi~-------------------------------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~  128 (261)
T KOG4169|consen   80 TFGTIDILINGAGIL-------------------------------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGK  128 (261)
T ss_pred             HhCceEEEEcccccc-------------------------------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCC
Confidence            999999999999987                               3345778899999999999999999998764   


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      +|-||++||..|..+.                                          +..+.|++||+++.+|+|++|.
T Consensus       129 GGiIvNmsSv~GL~P~------------------------------------------p~~pVY~AsKaGVvgFTRSla~  166 (261)
T KOG4169|consen  129 GGIIVNMSSVAGLDPM------------------------------------------PVFPVYAASKAGVVGFTRSLAD  166 (261)
T ss_pred             CcEEEEeccccccCcc------------------------------------------ccchhhhhcccceeeeehhhhh
Confidence            5789999999988664                                          7789999999999999999998


Q ss_pred             hC----CCcEEEEeeCCeeecCCCCC--------------------CCCCChhhhhhhhhhhhccCC
Q 022357          240 RY----PKFCVNCVCPGFVKTDINFH--------------------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       240 e~----~~i~vn~v~PG~v~t~~~~~--------------------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      ..    .||++|.||||++.|++...                    .+..++..++...+..+..++
T Consensus       167 ~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~~~  233 (261)
T KOG4169|consen  167 LAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEYPK  233 (261)
T ss_pred             hhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhhcc
Confidence            86    59999999999999986532                    234577778888887777644

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.98  E-value=6.4e-31  Score=232.60  Aligned_cols=226  Identities=26%  Similarity=0.336  Sum_probs=184.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+++|++|||||+|+||++++++|+++|++|++++|++++..+..++++..+.   .+.++++|+++.++++++++.+
T Consensus         2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~   78 (262)
T PRK13394          2 MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGG---KAIGVAMDVTNEDAVNAGIDKV   78 (262)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCc---eEEEEECCCCCHHHHHHHHHHH
Confidence            4557789999999999999999999999999999999999888888888766543   2788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhh-ccCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL-ELSD  159 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~~~  159 (298)
                      .+.++++|+||||||......                       +.+.+.+.+++.+++|+.+++.+++.+++.| +..+
T Consensus        79 ~~~~~~~d~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~  135 (262)
T PRK13394         79 AERFGSVDILVSNAGIQIVNP-----------------------IENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR  135 (262)
T ss_pred             HHHcCCCCEEEECCccCCCCc-----------------------hhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC
Confidence            988999999999999764321                       1124667888999999999999999999999 6666


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .++||++||..+..+.                                          +....|+++|+++.++++.++.
T Consensus       136 ~~~iv~~ss~~~~~~~------------------------------------------~~~~~y~~sk~a~~~~~~~la~  173 (262)
T PRK13394        136 GGVVIYMGSVHSHEAS------------------------------------------PLKSAYVTAKHGLLGLARVLAK  173 (262)
T ss_pred             CcEEEEEcchhhcCCC------------------------------------------CCCcccHHHHHHHHHHHHHHHH
Confidence            7899999997655332                                          4567899999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCC---------------------------CCCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFH---------------------------AGILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~---------------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      ++  .+|++|+|.||+++|++...                           ..+.++++.++..+.++..+....+|.+|
T Consensus       174 ~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~  253 (262)
T PRK13394        174 EGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSF  253 (262)
T ss_pred             HhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEE
Confidence            98  58999999999999985321                           12447777777777777654444556666


Q ss_pred             ccCc
Q 022357          291 LRKE  294 (298)
Q Consensus       291 l~~~  294 (298)
                      ..+.
T Consensus       254 ~~~~  257 (262)
T PRK13394        254 VVSH  257 (262)
T ss_pred             eeCC
Confidence            5543

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.98  E-value=6.8e-32  Score=236.01  Aligned_cols=221  Identities=22%  Similarity=0.261  Sum_probs=174.3

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      ++||||++|||+++|++|+++|++|++++|.. +......++++..+.+   +.++++|+++.++++++++.+.+.++++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGN---ARLLQFDVADRVACRTLLEADIAEHGAY   77 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCe---EEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999998754 4556666666654433   8899999999999999999999999999


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHh-hhhccCCCCcEEEE
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALI-PLLELSDSPRLVNL  166 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~-~~~~~~~~g~iv~v  166 (298)
                      |++|||||.....+                       +.+.+.+++++.+++|+.++++++++++ |.+++++.|+||++
T Consensus        78 ~~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~v  134 (239)
T TIGR01831        78 YGVVLNAGITRDAA-----------------------FPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITL  134 (239)
T ss_pred             CEEEECCCCCCCCc-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEE
Confidence            99999999764331                       1124678889999999999999999875 66665566899999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CCc
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKF  244 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~i  244 (298)
                      ||..+..+.                                          ++...|+++|+|+.+++++++.++  .+|
T Consensus       135 sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi  172 (239)
T TIGR01831       135 ASVSGVMGN------------------------------------------RGQVNYSAAKAGLIGATKALAVELAKRKI  172 (239)
T ss_pred             cchhhccCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHhHhCe
Confidence            998776543                                          557889999999999999999998  589


Q ss_pred             EEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCCCCCcceEeccCccCC
Q 022357          245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAP  297 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~  297 (298)
                      +||.|+||+++|++.........+.....|+.+...|++.+....|+.++.+.
T Consensus       173 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  225 (239)
T TIGR01831       173 TVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLAGFLMSDGAS  225 (239)
T ss_pred             EEEEEEEccCccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhc
Confidence            99999999999998753321111222344556666666666666666666544

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.98  E-value=7.8e-31  Score=230.78  Aligned_cols=222  Identities=26%  Similarity=0.320  Sum_probs=184.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+......+++. .+   ..+.++++|++|.++++++++.+.+
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~---~~~~~~~~D~~~~~~~~~~~~~i~~   77 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AG---GRAFARQGDVGSAEAVEALVDFVAA   77 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cC---CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4788999999999999999999999999999999999877777666665 22   2388999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      +++++|+||||+|......                       +...+.+.+++.+++|+.+++.+++.+++.|++++.++
T Consensus        78 ~~~~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  134 (252)
T PRK06138         78 RWGRLDVLVNNAGFGCGGT-----------------------VVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGS  134 (252)
T ss_pred             HcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeE
Confidence            9999999999999764321                       11257788999999999999999999999998777789


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      |+++||..+..+.                                          +....|+.+|++++.++++++.++ 
T Consensus       135 ii~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~  172 (252)
T PRK06138        135 IVNTASQLALAGG------------------------------------------RGRAAYVASKGAIASLTRAMALDHA  172 (252)
T ss_pred             EEEECChhhccCC------------------------------------------CCccHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998765432                                          557889999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC---------------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA---------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~---------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                       .+++|+.|+||.+.|++....                     .+.++++.++..+.++..+....+|.++..+
T Consensus       173 ~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~  246 (252)
T PRK06138        173 TDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATGTTLVVD  246 (252)
T ss_pred             hcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEEC
Confidence             499999999999999874321                     1346788888888877766666666666543

>PRK12742 oxidoreductase; Provisional

Probab=99.98  E-value=1.2e-31  Score=233.99  Aligned_cols=182  Identities=25%  Similarity=0.276  Sum_probs=147.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |+.+++|++|||||+||||++++++|+++|++|++++|+ .+..+++..++   +     ..++.+|+++.+++.++++ 
T Consensus         1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~---~-----~~~~~~D~~~~~~~~~~~~-   71 (237)
T PRK12742          1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET---G-----ATAVQTDSADRDAVIDVVR-   71 (237)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh---C-----CeEEecCCCCHHHHHHHHH-
Confidence            788899999999999999999999999999999988764 33333332222   1     4578899999998877764 


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                         .++++|++|||||.......                       .+.+.+++++.+++|+.+++.+++.+++.|+  +
T Consensus        72 ---~~~~id~li~~ag~~~~~~~-----------------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~  123 (237)
T PRK12742         72 ---KSGALDILVVNAGIAVFGDA-----------------------LELDADDIDRLFKINIHAPYHASVEAARQMP--E  123 (237)
T ss_pred             ---HhCCCcEEEECCCCCCCCCc-----------------------ccCCHHHHHHHHhHHHHHHHHHHHHHHHHHh--c
Confidence               35789999999997643211                       1247788999999999999999999999985  3


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..                                         .+.+....|+++|++++.+++.++.
T Consensus       124 ~g~iv~isS~~~~~-----------------------------------------~~~~~~~~Y~~sKaa~~~~~~~la~  162 (237)
T PRK12742        124 GGRIIIIGSVNGDR-----------------------------------------MPVAGMAAYAASKSALQGMARGLAR  162 (237)
T ss_pred             CCeEEEEecccccc-----------------------------------------CCCCCCcchHHhHHHHHHHHHHHHH
Confidence            48999999976532                                         1125578899999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCC
Q 022357          240 RY--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      ++  .+|+||.|+||+++|++..
T Consensus       163 ~~~~~gi~v~~v~Pg~~~t~~~~  185 (237)
T PRK12742        163 DFGPRGITINVVQPGPIDTDANP  185 (237)
T ss_pred             HHhhhCeEEEEEecCcccCCccc
Confidence            98  5899999999999999754

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.1e-30  Score=232.87  Aligned_cols=206  Identities=26%  Similarity=0.414  Sum_probs=176.7

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++++||||+||||++++++|+++|++|++++|+.+++.+...+++..+.+   +.++++|+++.++++++++.+.+.+++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~D~~~~~~~~~~~~~i~~~~~~   77 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGD---GFYQRCDVRDYSQLTALAQACEEKWGG   77 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---eEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            47999999999999999999999999999999988888888887765433   888999999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+||||||......                       +.+.+.+.+++.+++|+.+++.+++.++|.|++++.++||++
T Consensus        78 id~lI~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~v  134 (270)
T PRK05650         78 IDVIVNNAGVASGGF-----------------------FEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNI  134 (270)
T ss_pred             CCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            999999999865432                       123577889999999999999999999999987777899999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CCc
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKF  244 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~i  244 (298)
                      ||..+..+.                                          +..+.|+++|+++++|+++++.++  .+|
T Consensus       135 sS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi  172 (270)
T PRK05650        135 ASMAGLMQG------------------------------------------PAMSSYNVAKAGVVALSETLLVELADDEI  172 (270)
T ss_pred             CChhhcCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCc
Confidence            998776543                                          567899999999999999999998  589


Q ss_pred             EEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhcc
Q 022357          245 CVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALL  280 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~  280 (298)
                      +++.|+||+++|++....                 ...++++.++..+..+..
T Consensus       173 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~  225 (270)
T PRK05650        173 GVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAK  225 (270)
T ss_pred             EEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhC
Confidence            999999999999975421                 135778888887777664

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.98  E-value=7.3e-31  Score=232.16  Aligned_cols=217  Identities=28%  Similarity=0.286  Sum_probs=174.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++|++|||||+||||++++++|+++|++|++++|++... ...+++...+..   +.++++|+++.++++++++.+.+
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   79 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPR---AEFVQVDLTDDAQCRDAVEQTVA   79 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCc---eEEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998765 556666554433   88999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|++|||||......                       +.... +.+++.+++|+.+++.+++.++|.|++. .|+
T Consensus        80 ~~~~id~vi~~ag~~~~~~-----------------------~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~  134 (258)
T PRK08628         80 KFGRIDGLVNNAGVNDGVG-----------------------LEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGA  134 (258)
T ss_pred             hcCCCCEEEECCcccCCCc-----------------------ccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcE
Confidence            9999999999999753221                       11123 8889999999999999999999998754 489


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+++++++++++.++ 
T Consensus       135 iv~~ss~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~  172 (258)
T PRK08628        135 IVNISSKTALTGQ------------------------------------------GGTSGYAAAKGAQLALTREWAVALA  172 (258)
T ss_pred             EEEECCHHhccCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHh
Confidence            9999998776432                                          557899999999999999999987 


Q ss_pred             -CCcEEEEeeCCeeecCCCCC----------------------CCCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          242 -PKFCVNCVCPGFVKTDINFH----------------------AGILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~----------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                       ++|+||.|.||.|+|++...                      ....++++.++..+..+.......+|..+
T Consensus       173 ~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~  244 (258)
T PRK08628        173 KDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWL  244 (258)
T ss_pred             hcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhccccCceE
Confidence             58999999999999986321                      01345677777777766654444444433

>TIGR02415 23BDH acetoin reductases

Probab=99.98  E-value=1.3e-30  Score=229.76  Aligned_cols=220  Identities=27%  Similarity=0.311  Sum_probs=181.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      |+++||||+|+||++++++|+++|++|++++|+.+.+.+...++...+.   .+.++.+|+++.++++++++.+.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   77 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGG---KAVAYKLDVSDKDQVFSAIDQAAEKFGG   77 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999998777777777765443   2788999999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-CCcEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLVN  165 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~  165 (298)
                      +|+||||||.....                       ++.+.+.+.+++.+++|+.+++.+++.+++.|++.+ .++||+
T Consensus        78 id~vi~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~  134 (254)
T TIGR02415        78 FDVMVNNAGVAPIT-----------------------PILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIIN  134 (254)
T ss_pred             CCEEEECCCcCCCC-----------------------CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence            99999999976432                       122357788999999999999999999999998754 479999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK  243 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~  243 (298)
                      +||..+..+.                                          +....|++||++++.|++.++.++  .+
T Consensus       135 ~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~  172 (254)
T TIGR02415       135 AASIAGHEGN------------------------------------------PILSAYSSTKFAVRGLTQTAAQELAPKG  172 (254)
T ss_pred             ecchhhcCCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhcccC
Confidence            9998776443                                          567899999999999999999998  48


Q ss_pred             cEEEEeeCCeeecCCCCCC--------------------------CCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          244 FCVNCVCPGFVKTDINFHA--------------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~~~--------------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      |+|+.|+||+++|++....                          ...+|++.++....++..+....+|.++..+.
T Consensus       173 i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~  249 (254)
T TIGR02415       173 ITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDG  249 (254)
T ss_pred             eEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEecC
Confidence            9999999999999974321                          13466777777766666655556666665544

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-31  Score=234.33  Aligned_cols=186  Identities=32%  Similarity=0.401  Sum_probs=158.7

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+++|+++||||+||||++++++|+++|++|++++|+.+.+.+..+++   +.   .+.++++|+++.+++..+++.+
T Consensus         1 m~~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~---~~~~~~~D~~~~~~~~~~~~~~   74 (249)
T PRK06500          1 MSRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GE---SALVIRADAGDVAAQKALAQAL   74 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CC---ceEEEEecCCCHHHHHHHHHHH
Confidence            77788999999999999999999999999999999999876655554443   22   2788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|++|||||.....                       ++.+.+.+.+++.+++|+.+++.++++++|+|++  .
T Consensus        75 ~~~~~~id~vi~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~  129 (249)
T PRK06500         75 AEAFGRLDAVFINAGVAKFA-----------------------PLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--P  129 (249)
T ss_pred             HHHhCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--C
Confidence            99999999999999976432                       1223578889999999999999999999999853  4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      +++|+++|..+..+.                                          +....|+++|+++++++++++.+
T Consensus       130 ~~~i~~~S~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e  167 (249)
T PRK06500        130 ASIVLNGSINAHIGM------------------------------------------PNSSVYAASKAALLSLAKTLSGE  167 (249)
T ss_pred             CEEEEEechHhccCC------------------------------------------CCccHHHHHHHHHHHHHHHHHHH
Confidence            789999987665432                                          55789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~  259 (298)
                      +  .+|++++|+||.++|++.
T Consensus       168 ~~~~gi~v~~i~pg~~~t~~~  188 (249)
T PRK06500        168 LLPRGIRVNAVSPGPVQTPLY  188 (249)
T ss_pred             hhhcCeEEEEEeeCcCCCHHH
Confidence            8  599999999999999864

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.97  E-value=2.4e-30  Score=227.32  Aligned_cols=212  Identities=27%  Similarity=0.368  Sum_probs=175.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |..+.+|+++||||+||||++++++|+++|++|+++.+ +++..++..++++..+.   ++.++++|+++.+++.+++++
T Consensus         1 ~~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~   77 (247)
T PRK12935          1 MVQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGH---DVYAVQADVSKVEDANRLVEE   77 (247)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHH
Confidence            77788999999999999999999999999999987664 44555666666665433   388999999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+.++++|+||||||......                       +.+.+.+.+++.+++|+.+++.++++++|.|.+++
T Consensus        78 ~~~~~~~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  134 (247)
T PRK12935         78 AVNHFGKVDILVNNAGITRDRT-----------------------FKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE  134 (247)
T ss_pred             HHHHcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence            9999999999999999864321                       12346788899999999999999999999998777


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .++||++||..+..+.                                          +....|++||+|+++++++++.
T Consensus       135 ~~~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~  172 (247)
T PRK12935        135 EGRIISISSIIGQAGG------------------------------------------FGQTNYSAAKAGMLGFTKSLAL  172 (247)
T ss_pred             CcEEEEEcchhhcCCC------------------------------------------CCCcchHHHHHHHHHHHHHHHH
Confidence            7899999998765432                                          4567899999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhcc
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALL  280 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~  280 (298)
                      ++  .+|+++.|+||.++|++....               ....+++.++..+..+..
T Consensus       173 ~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~  230 (247)
T PRK12935        173 ELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD  230 (247)
T ss_pred             HHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc
Confidence            98  599999999999999864321               135678888877776653

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2e-30  Score=227.85  Aligned_cols=223  Identities=26%  Similarity=0.260  Sum_probs=183.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++.+++++||||+|+||++++++|+++|++|++++|+..+.......+.. +   ..+.++++|+++.++++++++++.+
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~---~~~~~~~~D~~~~~~~~~~~~~~~~   77 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-G---GRAIAVAADVSDEADVEAAVAAALE   77 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-C---CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998877776666654 2   2388999999999999999999988


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||......                      ++.+.+.+.+.+.+++|+.+++.+++.+++.|.+++.++
T Consensus        78 ~~~~~d~vi~~ag~~~~~~----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  135 (251)
T PRK07231         78 RFGSVDILVNNAGTTHRNG----------------------PLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGA  135 (251)
T ss_pred             HhCCCCEEEECCCCCCCCC----------------------ChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcE
Confidence            8999999999999754321                      122357788999999999999999999999998777789


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|+.+|++++.+++.++.++ 
T Consensus       136 iv~~sS~~~~~~~------------------------------------------~~~~~y~~sk~~~~~~~~~~a~~~~  173 (251)
T PRK07231        136 IVNVASTAGLRPR------------------------------------------PGLGWYNASKGAVITLTKALAAELG  173 (251)
T ss_pred             EEEEcChhhcCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhh
Confidence            9999998765443                                          557889999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC-------------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA-------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~-------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                       .+|+++.|+||++.|++....                   ...++++.+...+.++..+....+|.++...
T Consensus       174 ~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~  245 (251)
T PRK07231        174 PDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGVTLVVD  245 (251)
T ss_pred             hhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCCCCeEEEC
Confidence             499999999999999874321                   1246778888777777655555556655443

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-30  Score=229.67  Aligned_cols=189  Identities=28%  Similarity=0.328  Sum_probs=162.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|+++||||++|||++++++|+++|++|++++|++.+++...+++...+..   +.++.+|+++.++++.+++.+.+
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   78 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRR---ALAVPTDITDEDQCANLVALALE   78 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCc---eEEEecCCCCHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999988877777777654432   78999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|++|||||......                      ++.+.+.+.+++.+++|+.+++.+++++.+.|++.+ ++
T Consensus        79 ~~g~~d~vi~~ag~~~~~~----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~  135 (258)
T PRK07890         79 RFGRVDALVNNAFRVPSMK----------------------PLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GS  135 (258)
T ss_pred             HcCCccEEEECCccCCCCC----------------------CcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CE
Confidence            9999999999999753211                      122357899999999999999999999999997654 79


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|+++|++++.++++++.++ 
T Consensus       136 ii~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~l~~~~a~~~~  173 (258)
T PRK07890        136 IVMINSMVLRHSQ------------------------------------------PKYGAYKMAKGALLAASQSLATELG  173 (258)
T ss_pred             EEEEechhhccCC------------------------------------------CCcchhHHHHHHHHHHHHHHHHHHh
Confidence            9999997665332                                          557889999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCC
Q 022357          242 -PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~  259 (298)
                       .+|++|+|+||++.|++.
T Consensus       174 ~~~i~v~~v~pg~v~~~~~  192 (258)
T PRK07890        174 PQGIRVNSVAPGYIWGDPL  192 (258)
T ss_pred             hcCcEEEEEeCCccCcHHH
Confidence             589999999999999864

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=3e-30  Score=225.70  Aligned_cols=214  Identities=27%  Similarity=0.327  Sum_probs=180.4

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+++++||||+||||++++++|+++|++|++++|+..+..+...++...+.   ++.++++|+++.++++++++.+
T Consensus         2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~   78 (239)
T PRK07666          2 AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGV---KVVIATADVSDYEEVTAAIEQL   78 (239)
T ss_pred             CccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC---eEEEEECCCCCHHHHHHHHHHH
Confidence            4457789999999999999999999999999999999998877777777754332   3889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|++|||||......                       +.+.+.+.+++.+++|+.+++.+++++.|.|.+++.
T Consensus        79 ~~~~~~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  135 (239)
T PRK07666         79 KNELGSIDILINNAGISKFGK-----------------------FLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQS  135 (239)
T ss_pred             HHHcCCccEEEEcCccccCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence            999999999999999764321                       112467888999999999999999999999987777


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      +++|++||..+..+.                                          +....|+.+|+|+..+++.++.+
T Consensus       136 ~~iv~~ss~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~~a~e  173 (239)
T PRK07666        136 GDIINISSTAGQKGA------------------------------------------AVTSAYSASKFGVLGLTESLMQE  173 (239)
T ss_pred             cEEEEEcchhhccCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHH
Confidence            899999997766443                                          55678999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCC--------CCCCChhhhhhhhhhhhccCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFH--------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~--------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      +  .+|+++.|.||++.|++...        ....++++.++..+..+....
T Consensus       174 ~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~  225 (239)
T PRK07666        174 VRKHNIRVTALTPSTVATDMAVDLGLTDGNPDKVMQPEDLAEFIVAQLKLNK  225 (239)
T ss_pred             hhccCcEEEEEecCcccCcchhhccccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence            8  48999999999999987432        134678888888888877543

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.97  E-value=3.2e-31  Score=232.17  Aligned_cols=220  Identities=26%  Similarity=0.301  Sum_probs=175.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |.++++++++||||+||||++++++|+++|+.|++.+|+.+++......+   +.   .+.++.+|+++.++++++++.+
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~---~~~~~~~D~~~~~~~~~~~~~~   74 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GE---RVKIFPANLSDRDEVKALGQKA   74 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CC---ceEEEEccCCCHHHHHHHHHHH
Confidence            77888999999999999999999999999999999999877666554433   11   2788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|++|||||.......                       ...+.+.+++.+++|+.+++.+++++.+.+.+++.
T Consensus        75 ~~~~~~id~vi~~ag~~~~~~~-----------------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  131 (245)
T PRK12936         75 EADLEGVDILVNNAGITKDGLF-----------------------VRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRY  131 (245)
T ss_pred             HHHcCCCCEEEECCCCCCCCcc-----------------------ccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCC
Confidence            9999999999999998643211                       12466788899999999999999999988876667


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+..+.                                          +....|+++|+|+..+++.++.+
T Consensus       132 ~~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sk~a~~~~~~~la~~  169 (245)
T PRK12936        132 GRIINITSVVGVTGN------------------------------------------PGQANYCASKAGMIGFSKSLAQE  169 (245)
T ss_pred             CEEEEECCHHhCcCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHH
Confidence            899999997766443                                          55678999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCC---------------CCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAG---------------ILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      +  .++++++|+||+++|++.....               ..++++.+...+..+........|..+.
T Consensus       170 ~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~  237 (245)
T PRK12936        170 IATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTIH  237 (245)
T ss_pred             hhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEE
Confidence            8  5899999999999998753211               2345666666655554333334454444

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=3.2e-30  Score=228.08  Aligned_cols=223  Identities=26%  Similarity=0.255  Sum_probs=176.7

Q ss_pred             cCCCcEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCc-----------hhhHHHHHHHHhcCCCCcceeEEEeccCc
Q 022357            3 EATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDE-----------KRGLEAVEKLKASGVDPELLLFHQLDISD   69 (298)
Q Consensus         3 ~~~~~~vlITGas~--gIG~a~a~~La~~G~~Vii~~r~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~Dls~   69 (298)
                      .+++|++|||||++  |||++++++|+++|++|++++|++           .........+...+.   .+.++++|+++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~   78 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGV---RCEHMEIDLSQ   78 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCC---eEEEEECCCCC
Confidence            45789999999994  999999999999999999999872           222223344443332   38899999999


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHH
Q 022357           70 LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE  149 (298)
Q Consensus        70 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  149 (298)
                      .++++.+++++.+.++++|+||||||+....                       +..+.+.+.+++.+++|+.+++.+++
T Consensus        79 ~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~  135 (256)
T PRK12748         79 PYAPNRVFYAVSERLGDPSILINNAAYSTHT-----------------------RLEELTAEQLDKHYAVNVRATMLLSS  135 (256)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEECCCcCCCC-----------------------ChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999999999999999975432                       12235778889999999999999999


Q ss_pred             HHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHH
Q 022357          150 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAV  229 (298)
Q Consensus       150 ~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a  229 (298)
                      ++++.|..+..++||++||..+..+.                                          ++...|++||+|
T Consensus       136 ~~~~~~~~~~~~~iv~~ss~~~~~~~------------------------------------------~~~~~Y~~sK~a  173 (256)
T PRK12748        136 AFAKQYDGKAGGRIINLTSGQSLGPM------------------------------------------PDELAYAATKGA  173 (256)
T ss_pred             HHHHHhhhcCCeEEEEECCccccCCC------------------------------------------CCchHHHHHHHH
Confidence            99999977667899999997665332                                          456789999999


Q ss_pred             HHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCC------------CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          230 INAYTRILAKRY--PKFCVNCVCPGFVKTDINFH------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       230 l~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +++++++++.++  .+|+|+.|+||+++|++...            ....++++.++..+..+.......+|.++..+
T Consensus       174 ~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d  251 (256)
T PRK12748        174 IEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPKFPQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSE  251 (256)
T ss_pred             HHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhccCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEec
Confidence            999999999998  58999999999999986421            11347788888877766644445556666553

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.8e-31  Score=232.53  Aligned_cols=222  Identities=26%  Similarity=0.324  Sum_probs=176.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|+++||||+||||++++++|+++|++|++++|+.++++....++......   +.++.+|+++.++++++++.+.+
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   82 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGA---AHVVSLDVTDYQSIKAAVAHAET   82 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999988877777776654332   78899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC---
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---  159 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---  159 (298)
                      .++++|++|||||......                       +.+.+.+.++..+++|+.+++.++++++|.|..+.   
T Consensus        83 ~~~~~d~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~  139 (258)
T PRK06949         83 EAGTIDILVNNSGVSTTQK-----------------------LVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGA  139 (258)
T ss_pred             hcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcC
Confidence            9999999999999754321                       11246678889999999999999999999987553   


Q ss_pred             -----CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHH
Q 022357          160 -----SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT  234 (298)
Q Consensus       160 -----~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~  234 (298)
                           .++||++||..+..+.                                          +....|+++|++++.++
T Consensus       140 ~~~~~~g~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~  177 (258)
T PRK06949        140 GNTKPGGRIINIASVAGLRVL------------------------------------------PQIGLYCMSKAAVVHMT  177 (258)
T ss_pred             CCCCCCeEEEEECcccccCCC------------------------------------------CCccHHHHHHHHHHHHH
Confidence                 4799999997765332                                          45678999999999999


Q ss_pred             HHHHHhC--CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          235 RILAKRY--PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       235 ~~la~e~--~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +.++.++  .+|+||+|+||+|+|++....                ....|++.++....++.......+|.++..
T Consensus       178 ~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~  253 (258)
T PRK06949        178 RAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADESQFINGAIISA  253 (258)
T ss_pred             HHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEe
Confidence            9999998  589999999999999976421                122445555555555444344444544443

>PRK06484 short chain dehydrogenase; Validated

Probab=99.97  E-value=9.8e-31  Score=253.79  Aligned_cols=217  Identities=28%  Similarity=0.320  Sum_probs=175.6

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ..+|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.   .   .+.++++|++++++++++++.+.++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~~~D~~~~~~~~~~~~~~~~~   76 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG---P---DHHALAMDVSDEAQIREGFEQLHRE   76 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---C---ceeEEEeccCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999887776655542   1   2778999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC-c
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP-R  162 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-~  162 (298)
                      ++++|+||||||...+.                     +.++.+.+.++|++.+++|+.+++.++++++|.|++++.| +
T Consensus        77 ~g~iD~li~nag~~~~~---------------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~  135 (520)
T PRK06484         77 FGRIDVLVNNAGVTDPT---------------------MTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAA  135 (520)
T ss_pred             hCCCCEEEECCCcCCCC---------------------CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCe
Confidence            99999999999974321                     0122235788899999999999999999999999766554 9


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|+++|+|+.+|+++++.|+ 
T Consensus       136 iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la~e~~  173 (520)
T PRK06484        136 IVNVASGAGLVAL------------------------------------------PKRTAYSASKAAVISLTRSLACEWA  173 (520)
T ss_pred             EEEECCcccCCCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhh
Confidence            9999998876543                                          567899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC------------------CCCChhhhhhhhhhhhccCCCCCcceE
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA------------------GILSVEEGAESPVKLALLPDGGPTGRF  289 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~  289 (298)
                       .+|+||.|+||+|+|++....                  ...++++.++..+.++........|..
T Consensus       174 ~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~~  240 (520)
T PRK06484        174 AKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGST  240 (520)
T ss_pred             hhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCce
Confidence             489999999999999975321                  123666777666666554433334433

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.9e-30  Score=232.07  Aligned_cols=222  Identities=27%  Similarity=0.283  Sum_probs=175.3

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      +.+++|++|||||++|||++++++|+++|++|++++|+.. ......+.++..+.   ++.++.+|+++.++++++++++
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~i  118 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGV---KCLLIPGDVSDEAFCKDAVEET  118 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCC---eEEEEEccCCCHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999864 34445555544332   3788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||......                      .+.+.+.+.+.+.+++|+.+++.+++++++.|+.  .
T Consensus       119 ~~~~~~iD~lI~~Ag~~~~~~----------------------~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~  174 (290)
T PRK06701        119 VRELGRLDILVNNAAFQYPQQ----------------------SLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--G  174 (290)
T ss_pred             HHHcCCCCEEEECCcccCCCC----------------------CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--C
Confidence            999999999999999753321                      1223577889999999999999999999999853  4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+..+.                                          +....|++||+|++.|+++++.+
T Consensus       175 g~iV~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~l~~~la~~  212 (290)
T PRK06701        175 SAIINTGSITGYEGN------------------------------------------ETLIDYSATKGAIHAFTRSLAQS  212 (290)
T ss_pred             CeEEEEecccccCCC------------------------------------------CCcchhHHHHHHHHHHHHHHHHH
Confidence            799999998776443                                          44578999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +  .+|+||+|+||+++|++....                .+.++++.++..+..+.......+|..+..
T Consensus       213 ~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~i  282 (290)
T PRK06701        213 LVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHV  282 (290)
T ss_pred             hhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEe
Confidence            8  499999999999999865321                134566666666666655444444544443

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-30  Score=226.34  Aligned_cols=209  Identities=17%  Similarity=0.078  Sum_probs=163.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +++||||++|||++++++|+++|++|++++|+.+++....+++.        +.++++|+++.++++++++.+.+   ++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--------~~~~~~D~~~~~~v~~~~~~~~~---~i   70 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELD--------VDAIVCDNTDPASLEEARGLFPH---HL   70 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc--------CcEEecCCCCHHHHHHHHHHHhh---cC
Confidence            59999999999999999999999999999999877666554431        56789999999999998877642   69


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |++|||||........                 ....+.+ +.++|++.+++|+.++++++++++|.|++  .|+||++|
T Consensus        71 d~lv~~ag~~~~~~~~-----------------~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~is  130 (223)
T PRK05884         71 DTIVNVPAPSWDAGDP-----------------RTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVV  130 (223)
T ss_pred             cEEEECCCccccCCCC-----------------cccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEe
Confidence            9999999853211000                 0001122 35789999999999999999999999964  48999999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CCcE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFC  245 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~i~  245 (298)
                      |...                                              +....|++||+|+.+|+++++.|+  .+|+
T Consensus       131 S~~~----------------------------------------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~  164 (223)
T PRK05884        131 PENP----------------------------------------------PAGSAEAAIKAALSNWTAGQAAVFGTRGIT  164 (223)
T ss_pred             cCCC----------------------------------------------CCccccHHHHHHHHHHHHHHHHHhhhcCeE
Confidence            9541                                              335789999999999999999999  5899


Q ss_pred             EEEeeCCeeecCCCCC---CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          246 VNCVCPGFVKTDINFH---AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       246 vn~v~PG~v~t~~~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      ||+|+||+++|++...   .+..++++.+...+.+........+|..+..+
T Consensus       165 v~~v~PG~v~t~~~~~~~~~p~~~~~~ia~~~~~l~s~~~~~v~G~~i~vd  215 (223)
T PRK05884        165 INAVACGRSVQPGYDGLSRTPPPVAAEIARLALFLTTPAARHITGQTLHVS  215 (223)
T ss_pred             EEEEecCccCchhhhhccCCCCCCHHHHHHHHHHHcCchhhccCCcEEEeC
Confidence            9999999999987532   23347788888888877655555566655443

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.97  E-value=4.2e-30  Score=226.75  Aligned_cols=223  Identities=27%  Similarity=0.379  Sum_probs=183.4

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++|+++||||+|+||++++++|+++|++|++++|++++......++...+.   ++.++.+|+++.++++++++.+.+.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGG---KAIGVAMDVTDEEAINAGIDYAVET   78 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999998887777777765433   3889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      ++++|+||||||......                       ..+.+.+.+++.+++|+.+++.+++.+++.|++++.++|
T Consensus        79 ~~~~d~vi~~a~~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i  135 (258)
T PRK12429         79 FGGVDILVNNAGIQHVAP-----------------------IEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRI  135 (258)
T ss_pred             cCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEE
Confidence            999999999999764331                       123467788899999999999999999999988778899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+.                                          ++...|+++|+++..+++.++.++  
T Consensus       136 v~iss~~~~~~~------------------------------------------~~~~~y~~~k~a~~~~~~~l~~~~~~  173 (258)
T PRK12429        136 INMASVHGLVGS------------------------------------------AGKAAYVSAKHGLIGLTKVVALEGAT  173 (258)
T ss_pred             EEEcchhhccCC------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhcc
Confidence            999998776443                                          567899999999999999999998  


Q ss_pred             CCcEEEEeeCCeeecCCCCC---------------------------CCCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          242 PKFCVNCVCPGFVKTDINFH---------------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~---------------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      .+|+|+.++||++.|++...                           ..+.++++.++..+.++.......+|.+|..+.
T Consensus       174 ~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  253 (258)
T PRK12429        174 HGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDG  253 (258)
T ss_pred             cCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCC
Confidence            58999999999999976421                           123467777777766665544444566555543

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.6e-30  Score=230.84  Aligned_cols=209  Identities=29%  Similarity=0.328  Sum_probs=174.0

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+..  ...++++|+++.++++++++++.+.+++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGT--VPEHRALDISDYDAVAAFAADIHAAHGS   78 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC--cceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            57999999999999999999999999999999988777777777654432  2566899999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC-CCCcEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVN  165 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~  165 (298)
                      +|+||||||.....                       .+.+.+.+++++.+++|+.+++.++++++|.|..+ +.|+||+
T Consensus        79 id~lv~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~  135 (272)
T PRK07832         79 MDVVMNIAGISAWG-----------------------TVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVN  135 (272)
T ss_pred             CCEEEECCCCCCCC-----------------------ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            99999999976432                       22235788999999999999999999999999754 3589999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK  243 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~  243 (298)
                      +||..+..+.                                          ++...|++||+|+.+|+++++.++  .+
T Consensus       136 isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~  173 (272)
T PRK07832        136 VSSAAGLVAL------------------------------------------PWHAAYSASKFGLRGLSEVLRFDLARHG  173 (272)
T ss_pred             EccccccCCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhhhcC
Confidence            9998765432                                          567789999999999999999998  58


Q ss_pred             cEEEEeeCCeeecCCCCCC---------------------CCCChhhhhhhhhhhhccCC
Q 022357          244 FCVNCVCPGFVKTDINFHA---------------------GILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~~~---------------------~~~~~~~~a~~~~~~~~~~~  282 (298)
                      |+|+.|+||.++|++....                     ...+|++.|...+..+...+
T Consensus       174 i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~~~  233 (272)
T PRK07832        174 IGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILAGVEKNR  233 (272)
T ss_pred             cEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHhcCC
Confidence            9999999999999874321                     13678888888877775443

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.8e-31  Score=233.85  Aligned_cols=189  Identities=28%  Similarity=0.423  Sum_probs=157.8

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..+.+|+++||||+||||++++++|+++|++|++++|+....+...+++.        ..++++|+++.++++++++.+.
T Consensus         3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--------~~~~~~D~~~~~~~~~~~~~~~   74 (255)
T PRK06057          3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG--------GLFVPTDVTDEDAVNALFDTAA   74 (255)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC--------CcEEEeeCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999998766555444431        2578899999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +.++++|++|||||...+..                     ..+.+.+.+.+++.+++|+.+++.+++.++|+|++++.|
T Consensus        75 ~~~~~id~vi~~ag~~~~~~---------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g  133 (255)
T PRK06057         75 ETYGSVDIAFNNAGISPPED---------------------DSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKG  133 (255)
T ss_pred             HHcCCCCEEEECCCcCCCCC---------------------CCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCc
Confidence            98899999999999754210                     012235778899999999999999999999999877778


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                         +++...|+++|+|+.++++.++.++
T Consensus       134 ~iv~~sS~~~~~g~-----------------------------------------~~~~~~Y~~sKaal~~~~~~l~~~~  172 (255)
T PRK06057        134 SIINTASFVAVMGS-----------------------------------------ATSQISYTASKGGVLAMSRELGVQF  172 (255)
T ss_pred             EEEEEcchhhccCC-----------------------------------------CCCCcchHHHHHHHHHHHHHHHHHH
Confidence            99999997665432                                         1345679999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~  260 (298)
                        .+|+|++|+||+++|++..
T Consensus       173 ~~~gi~v~~i~pg~v~t~~~~  193 (255)
T PRK06057        173 ARQGIRVNALCPGPVNTPLLQ  193 (255)
T ss_pred             HhhCcEEEEEeeCCcCCchhh
Confidence              4899999999999998753

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.8e-30  Score=231.22  Aligned_cols=184  Identities=24%  Similarity=0.294  Sum_probs=157.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++++||||+||||++++++|+++|++|++++|+.+++....+.    ...  ++.++++|+++.+++.++++.+.+.+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~   76 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----HPD--RALARLLDVTDFDAIDAVVADAEATF   76 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----cCC--CeeEEEccCCCHHHHHHHHHHHHHHh
Confidence            468999999999999999999999999999999997665443322    111  37889999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      +++|+||||||.....+                       ..+.+.+.+++.+++|+.|++.++++++|.|++++.++||
T Consensus        77 ~~~d~vv~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv  133 (277)
T PRK06180         77 GPIDVLVNNAGYGHEGA-----------------------IEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIV  133 (277)
T ss_pred             CCCCEEEECCCccCCcc-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEE
Confidence            99999999999864332                       1235778899999999999999999999999887778999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||..+..+.                                          ++...|+++|+++++++++++.++  .
T Consensus       134 ~iSS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~  171 (277)
T PRK06180        134 NITSMGGLITM------------------------------------------PGIGYYCGSKFALEGISESLAKEVAPF  171 (277)
T ss_pred             EEecccccCCC------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhh
Confidence            99998776443                                          567899999999999999999998  4


Q ss_pred             CcEEEEeeCCeeecCCC
Q 022357          243 KFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~  259 (298)
                      +++|++|+||.+.|++.
T Consensus       172 gi~v~~i~Pg~v~t~~~  188 (277)
T PRK06180        172 GIHVTAVEPGSFRTDWA  188 (277)
T ss_pred             CcEEEEEecCCcccCcc
Confidence            99999999999999863

>PRK06182 short chain dehydrogenase; Validated

Probab=99.97  E-value=2.5e-30  Score=230.95  Aligned_cols=181  Identities=28%  Similarity=0.376  Sum_probs=156.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++|+++||||+||||++++++|+++|++|++++|+.+++.+..    ..     .+.++++|+++.++++++++.+.+.+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~~-----~~~~~~~Dv~~~~~~~~~~~~~~~~~   72 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----SL-----GVHPLSLDVTDEASIKAAVDTIIAEE   72 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hC-----CCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999976654332    11     17789999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      +++|+||||||.....                       ++.+.+.+.+++.+++|+.+++.+++.++|.|++++.|+||
T Consensus        73 ~~id~li~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv  129 (273)
T PRK06182         73 GRIDVLVNNAGYGSYG-----------------------AIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRII  129 (273)
T ss_pred             CCCCEEEECCCcCCCC-----------------------chhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEE
Confidence            9999999999986433                       22335788899999999999999999999999887778999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||..+..+.                                          +....|++||+|+++|+++++.|+  .
T Consensus       130 ~isS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~l~~e~~~~  167 (273)
T PRK06182        130 NISSMGGKIYT------------------------------------------PLGAWYHATKFALEGFSDALRLEVAPF  167 (273)
T ss_pred             EEcchhhcCCC------------------------------------------CCccHhHHHHHHHHHHHHHHHHHhccc
Confidence            99997765432                                          456789999999999999999998  5


Q ss_pred             CcEEEEeeCCeeecCCC
Q 022357          243 KFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~  259 (298)
                      +|+|++|+||+++|++.
T Consensus       168 gi~v~~v~Pg~v~t~~~  184 (273)
T PRK06182        168 GIDVVVIEPGGIKTEWG  184 (273)
T ss_pred             CCEEEEEecCCcccccc
Confidence            89999999999999874

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.97  E-value=5e-31  Score=233.35  Aligned_cols=188  Identities=21%  Similarity=0.248  Sum_probs=159.2

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +|++|||||+++||++++++|+++|++|++++|+........+++....+. .++.++.+|+++.+++.++++++.+.++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGE-GMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCC-ceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999999999987777777666643321 2388999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-CCcEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLV  164 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv  164 (298)
                      ++|++|||||......                       +.+.+.+.+++.+++|+.+++++++++.+.|++++ .++||
T Consensus        81 ~id~vv~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv  137 (259)
T PRK12384         81 RVDLLVYNAGIAKAAF-----------------------ITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRII  137 (259)
T ss_pred             CCCEEEECCCcCCCCC-----------------------cccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEE
Confidence            9999999999765431                       12357788999999999999999999999998765 58999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||..+..+.                                          +....|++||+|+++++++++.++  .
T Consensus       138 ~~ss~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~l~~~la~e~~~~  175 (259)
T PRK12384        138 QINSKSGKVGS------------------------------------------KHNSGYSAAKFGGVGLTQSLALDLAEY  175 (259)
T ss_pred             EecCcccccCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHHHc
Confidence            99997765432                                          456789999999999999999987  5


Q ss_pred             CcEEEEeeCCee-ecCCC
Q 022357          243 KFCVNCVCPGFV-KTDIN  259 (298)
Q Consensus       243 ~i~vn~v~PG~v-~t~~~  259 (298)
                      ||+||+|+||.+ .|++.
T Consensus       176 gi~v~~v~pg~~~~~~~~  193 (259)
T PRK12384        176 GITVHSLMLGNLLKSPMF  193 (259)
T ss_pred             CcEEEEEecCCcccchhh
Confidence            899999999975 56543

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.6e-31  Score=229.58  Aligned_cols=222  Identities=30%  Similarity=0.371  Sum_probs=177.5

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      +++++|+++||||++|||++++++|+++|++|+++.|+.. ...+..+++...+.   ++.++++|+++.++++++++++
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~   77 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGG---RAIAVQADVADAAAVTRLFDAA   77 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHHH
Confidence            3567899999999999999999999999999998887644 45556666655433   3889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|++|||||.....                       ++.+.+.+.+++.+++|+.+++.++++++|.|+.  .
T Consensus        78 ~~~~~~id~vi~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~  132 (245)
T PRK12937         78 ETAFGRIDVLVNNAGVMPLG-----------------------TIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--G  132 (245)
T ss_pred             HHHcCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--C
Confidence            99999999999999975432                       1123467888999999999999999999999863  4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+..+.                                          +....|+++|++++.++++++.+
T Consensus       133 ~~iv~~ss~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~~a~~  170 (245)
T PRK12937        133 GRIINLSTSVIALPL------------------------------------------PGYGPYAASKAAVEGLVHVLANE  170 (245)
T ss_pred             cEEEEEeeccccCCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHH
Confidence            799999997665332                                          56788999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +  .+++++.|+||+++|++....                ...++++.++..+..+..+....+|.++..+
T Consensus       171 ~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~  241 (245)
T PRK12937        171 LRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVN  241 (245)
T ss_pred             hhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccccEEEeC
Confidence            8  589999999999999984221                1236777777766666554445556665544

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=6.8e-30  Score=224.65  Aligned_cols=226  Identities=28%  Similarity=0.312  Sum_probs=186.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccC--cHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS--DLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls--~~~~v~~~~~~~   80 (298)
                      .+++|+++||||+++||.+++++|+++|++|++++|+.+++....++++..+..  ++.++.+|++  +.++++++++.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGP--QPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCC--CceEEEecccCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988877777777765433  2667777775  789999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||......                      ++.+.+.+.+++.+++|+.+++.++++++|.|++++.
T Consensus        87 ~~~~~~id~vi~~Ag~~~~~~----------------------~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~  144 (247)
T PRK08945         87 EEQFGRLDGVLHNAGLLGELG----------------------PMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPA  144 (247)
T ss_pred             HHHhCCCCEEEECCcccCCCC----------------------CcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCC
Confidence            999999999999999764321                      1112467888999999999999999999999988888


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+..+.                                          +....|++||+|+++|++.++.+
T Consensus       145 ~~iv~~ss~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~~  182 (247)
T PRK08945        145 ASLVFTSSSVGRQGR------------------------------------------ANWGAYAVSKFATEGMMQVLADE  182 (247)
T ss_pred             CEEEEEccHhhcCCC------------------------------------------CCCcccHHHHHHHHHHHHHHHHH
Confidence            999999997765432                                          55678999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCC-------CCCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFH-------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~-------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      +  .+|++++|+||++.|++...       ....++++.++..+..+........|.++....
T Consensus       183 ~~~~~i~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  245 (247)
T PRK08945        183 YQGTNLRVNCINPGGTRTAMRASAFPGEDPQKLKTPEDIMPLYLYLMGDDSRRKNGQSFDAQP  245 (247)
T ss_pred             hcccCEEEEEEecCCccCcchhhhcCcccccCCCCHHHHHHHHHHHhCccccccCCeEEeCCC
Confidence            8  58999999999999986422       235688889988888776556666777776554

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.3e-30  Score=229.75  Aligned_cols=184  Identities=30%  Similarity=0.348  Sum_probs=159.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++|+++||||+||||++++++|+++|++|++++|++++++...+.+   ..   .+.++++|+++.++++++++.+.+.+
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GD---RLLPLALDVTDRAAVFAAVETAVEHF   75 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cC---CeeEEEccCCCHHHHHHHHHHHHHHc
Confidence            3589999999999999999999999999999999987765554432   11   27788999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      +++|++|||||.....+                       +.+.+.+.+++.+++|+.+++.+++.++|.|++++.++||
T Consensus        76 ~~~d~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv  132 (275)
T PRK08263         76 GRLDIVVNNAGYGLFGM-----------------------IEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHII  132 (275)
T ss_pred             CCCCEEEECCCCccccc-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEE
Confidence            99999999999865432                       1235778899999999999999999999999877778999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||..+..+.                                          +....|+++|++++++++.++.++  .
T Consensus       133 ~vsS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~  170 (275)
T PRK08263        133 QISSIGGISAF------------------------------------------PMSGIYHASKWALEGMSEALAQEVAEF  170 (275)
T ss_pred             EEcChhhcCCC------------------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhh
Confidence            99998776443                                          557789999999999999999997  5


Q ss_pred             CcEEEEeeCCeeecCCC
Q 022357          243 KFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~  259 (298)
                      ||+|+.|+||+++|++.
T Consensus       171 gi~v~~v~Pg~~~t~~~  187 (275)
T PRK08263        171 GIKVTLVEPGGYSTDWA  187 (275)
T ss_pred             CcEEEEEecCCccCCcc
Confidence            89999999999999876

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.7e-30  Score=227.84  Aligned_cols=209  Identities=22%  Similarity=0.280  Sum_probs=175.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++++++||||+||||++++++|+++|++|++++|+.+.+.....++. .+   ..+.++++|+++.++++.+++.+.+
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~---~~~~~~~~D~~d~~~~~~~~~~~~~   77 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP-YP---GRHRWVVADLTSEAGREAVLARARE   77 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHh-cC---CceEEEEccCCCHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999887777766662 22   2388999999999999999988876


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                       ++++|++|||||.....+                       +.+.+.+.+++.+++|+.|++.+++.++|+|.+++.++
T Consensus        78 -~~~id~lv~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~  133 (263)
T PRK09072         78 -MGGINVLINNAGVNHFAL-----------------------LEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAM  133 (263)
T ss_pred             -cCCCCEEEECCCCCCccc-----------------------cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCE
Confidence             789999999999764321                       12347788899999999999999999999998776789


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|+.+|+++.+++++++.++ 
T Consensus       134 iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~  171 (263)
T PRK09072        134 VVNVGSTFGSIGY------------------------------------------PGYASYCASKFALRGFSEALRRELA  171 (263)
T ss_pred             EEEecChhhCcCC------------------------------------------CCccHHHHHHHHHHHHHHHHHHHhc
Confidence            9999998766443                                          557889999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC----------CCCChhhhhhhhhhhhccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA----------GILSVEEGAESPVKLALLP  281 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~----------~~~~~~~~a~~~~~~~~~~  281 (298)
                       .+|+|++|+||+++|++....          ...++++.++..+..+...
T Consensus       172 ~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        172 DTGVRVLYLAPRATRTAMNSEAVQALNRALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             ccCcEEEEEecCcccccchhhhcccccccccCCCCCHHHHHHHHHHHHhCC
Confidence             489999999999999874321          2457888898888888753

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.97  E-value=7.4e-30  Score=224.30  Aligned_cols=222  Identities=27%  Similarity=0.301  Sum_probs=177.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .|+++||||++|||+++++.|+++|++|++++ |+++.+....++++..+.   ++.+++||+++.++++.+++++.+.+
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGG---RACVVAGDVANEADVIAMFDAVQSAF   78 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC---cEEEEEeccCCHHHHHHHHHHHHHhc
Confidence            36899999999999999999999999998875 565666666666665433   38899999999999999999999889


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC---CC
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---SP  161 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g  161 (298)
                      +++|++|||||......                      .+.+.+.+++++.+++|+.+++.+++.+++.|..++   .+
T Consensus        79 ~~id~li~~ag~~~~~~----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~  136 (248)
T PRK06947         79 GRLDALVNNAGIVAPSM----------------------PLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGG  136 (248)
T ss_pred             CCCCEEEECCccCCCCC----------------------ChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCc
Confidence            99999999999764321                      112357788999999999999999999999886543   47


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                         +.....|++||+++++|+++++.++
T Consensus       137 ~ii~~sS~~~~~~~-----------------------------------------~~~~~~Y~~sK~~~~~~~~~la~~~  175 (248)
T PRK06947        137 AIVNVSSIASRLGS-----------------------------------------PNEYVDYAGSKGAVDTLTLGLAKEL  175 (248)
T ss_pred             EEEEECchhhcCCC-----------------------------------------CCCCcccHhhHHHHHHHHHHHHHHh
Confidence            89999998766432                                         1224579999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                        .+|+|+.|.||+++|++....                ...++++.++..+..+..+.....|.++...
T Consensus       176 ~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~  245 (248)
T PRK06947        176 GPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGALLDVG  245 (248)
T ss_pred             hhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEeeC
Confidence              489999999999999975310                1246788888877777666666677776553

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.97  E-value=4.5e-30  Score=228.64  Aligned_cols=231  Identities=21%  Similarity=0.139  Sum_probs=169.1

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhhHHHHHHHHhcCCCCcceeEEEeccCcHHHH----HHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQLDISDLASV----SSLADFIK   81 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v----~~~~~~~~   81 (298)
                      ++++||||++|||++++++|+++|++|++++|+ .+.+....+++......  .+.++.+|+++.+++    +++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~d~~~~~~~~~~~~~~~~   79 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPN--SAVTCQADLSNSATLFSRCEAIIDACF   79 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCC--ceEEEEccCCCchhhHHHHHHHHHHHH
Confidence            689999999999999999999999999998754 55666666666543222  267789999999865    45566666


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC---
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS---  158 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---  158 (298)
                      +.++++|+||||||...+.+..+.            ...++........+.+.+.+++|+.+++.+++++.|.|+..   
T Consensus        80 ~~~g~iD~lv~nAG~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~  147 (267)
T TIGR02685        80 RAFGRCDVLVNNASAFYPTPLLRG------------DAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAE  147 (267)
T ss_pred             HccCCceEEEECCccCCCCccccc------------ccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccc
Confidence            778999999999997654322111            00000001112335678999999999999999999998543   


Q ss_pred             ---CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHH
Q 022357          159 ---DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTR  235 (298)
Q Consensus       159 ---~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~  235 (298)
                         ..++|++++|..+..+.                                          +...+|++||+|+++|++
T Consensus       148 ~~~~~~~iv~~~s~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~  185 (267)
T TIGR02685       148 QRSTNLSIVNLCDAMTDQPL------------------------------------------LGFTMYTMAKHALEGLTR  185 (267)
T ss_pred             cCCCCeEEEEehhhhccCCC------------------------------------------cccchhHHHHHHHHHHHH
Confidence               23689999997665332                                          567889999999999999


Q ss_pred             HHHHhC--CCcEEEEeeCCeeecCCCCC--------------CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          236 ILAKRY--PKFCVNCVCPGFVKTDINFH--------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       236 ~la~e~--~~i~vn~v~PG~v~t~~~~~--------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +++.|+  .||+||+|+||+++|+....              ....+|++.++..++++.......+|.++..+
T Consensus       186 ~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~  259 (267)
T TIGR02685       186 SAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVD  259 (267)
T ss_pred             HHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHhCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEEC
Confidence            999998  58999999999987653211              02357788888888777655556666665543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.6e-30  Score=225.79  Aligned_cols=225  Identities=25%  Similarity=0.308  Sum_probs=182.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~-Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |..+++|+++||||++|||+.++++|+++|++ |++++|+.++.....+++...+.   .+.++.+|+++.+++.++++.
T Consensus         1 ~~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~   77 (260)
T PRK06198          1 MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGA---KAVFVQADLSDVEDCRRVVAA   77 (260)
T ss_pred             CCCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCC---eEEEEEccCCCHHHHHHHHHH
Confidence            78889999999999999999999999999999 99999998777766667654432   378889999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+.++++|++|||||......                       +.+.+.+.+++.+++|+.+++.++++++++|.+++
T Consensus        78 ~~~~~g~id~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  134 (260)
T PRK06198         78 ADEAFGRLDALVNAAGLTDRGT-----------------------ILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRK  134 (260)
T ss_pred             HHHHhCCCCEEEECCCcCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999764321                       12357788999999999999999999999997653


Q ss_pred             -CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          160 -SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       160 -~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                       .|++|++||..+..+.                                          +....|+.+|+++++|+++++
T Consensus       135 ~~g~iv~~ss~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~~a  172 (260)
T PRK06198        135 AEGTIVNIGSMSAHGGQ------------------------------------------PFLAAYCASKGALATLTRNAA  172 (260)
T ss_pred             CCCEEEEECCcccccCC------------------------------------------CCcchhHHHHHHHHHHHHHHH
Confidence             5899999998765432                                          556789999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCC----------------------CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFH----------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~----------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      .++  .+|+|+.|+||++.|++...                      ....++++.++..+..+.......+|..+..+
T Consensus       173 ~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~  251 (260)
T PRK06198        173 YALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFD  251 (260)
T ss_pred             HHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhCCccCceEeEC
Confidence            998  58999999999999986311                      01246777777777766554444555555443

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.9e-30  Score=224.50  Aligned_cols=210  Identities=24%  Similarity=0.278  Sum_probs=175.4

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +|+++||||++|||++++++|+++|++|++++|+.++..+....+..... ...+.++++|+++.++++++++++.+.++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYP-GIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCC-CceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999999998887777766654321 12388999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|++|||||+......                       ...+.+.+.+.+++|+.+++.+++.++|.|++.+.++||+
T Consensus        81 ~id~vi~~ag~~~~~~~-----------------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~  137 (248)
T PRK08251         81 GLDRVIVNAGIGKGARL-----------------------GTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVL  137 (248)
T ss_pred             CCCEEEECCCcCCCCCc-----------------------CcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            99999999998644311                       1235677788999999999999999999998777789999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK  243 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~  243 (298)
                      +||..+..+.                                         +.....|+.||++++.+++.++.++  .+
T Consensus       138 ~sS~~~~~~~-----------------------------------------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~  176 (248)
T PRK08251        138 ISSVSAVRGL-----------------------------------------PGVKAAYAASKAGVASLGEGLRAELAKTP  176 (248)
T ss_pred             EeccccccCC-----------------------------------------CCCcccHHHHHHHHHHHHHHHHHHhcccC
Confidence            9998776432                                         1235789999999999999999998  48


Q ss_pred             cEEEEeeCCeeecCCCCCC----CCCChhhhhhhhhhhhcc
Q 022357          244 FCVNCVCPGFVKTDINFHA----GILSVEEGAESPVKLALL  280 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~~~----~~~~~~~~a~~~~~~~~~  280 (298)
                      ++|++|+||+++|++....    ..++++++++..+..+..
T Consensus       177 i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~a~~i~~~~~~  217 (248)
T PRK08251        177 IKVSTIEPGYIRSEMNAKAKSTPFMVDTETGVKALVKAIEK  217 (248)
T ss_pred             cEEEEEecCcCcchhhhccccCCccCCHHHHHHHHHHHHhc
Confidence            9999999999999976542    246789999888877764

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.2e-30  Score=228.91  Aligned_cols=180  Identities=29%  Similarity=0.411  Sum_probs=156.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++++||||+||||++++++|+++|++|++++|++++...       .    ..+.++++|++|.++++++++.+.+.+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------~----~~~~~~~~D~~d~~~~~~~~~~~~~~~   71 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------I----PGVELLELDVTDDASVQAAVDEVIARA   71 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------c----CCCeeEEeecCCHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999999998754321       1    127889999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      +++|+||||||......                       +.+.+.+.+++.+++|+.|++.+++.++|.|++++.++||
T Consensus        72 g~~d~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv  128 (270)
T PRK06179         72 GRIDVLVNNAGVGLAGA-----------------------AEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRII  128 (270)
T ss_pred             CCCCEEEECCCCCCCcC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEE
Confidence            99999999999865432                       1235778899999999999999999999999888789999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||..+..+.                                          +....|++||+++++|+++++.|+  .
T Consensus       129 ~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~el~~~  166 (270)
T PRK06179        129 NISSVLGFLPA------------------------------------------PYMALYAASKHAVEGYSESLDHEVRQF  166 (270)
T ss_pred             EECCccccCCC------------------------------------------CCccHHHHHHHHHHHHHHHHHHHHhhh
Confidence            99998776443                                          567899999999999999999998  5


Q ss_pred             CcEEEEeeCCeeecCCCC
Q 022357          243 KFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~  260 (298)
                      +|++++|+||+++|++..
T Consensus       167 gi~v~~v~pg~~~t~~~~  184 (270)
T PRK06179        167 GIRVSLVEPAYTKTNFDA  184 (270)
T ss_pred             CcEEEEEeCCCccccccc
Confidence            999999999999998754

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-30  Score=230.84  Aligned_cols=227  Identities=26%  Similarity=0.306  Sum_probs=176.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++.....+...+.   ++.++++|+++.++++++++.+.+
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~---~~~~~~~Dl~d~~~i~~~~~~~~~   85 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGI---DALWIAADVADEADIERLAEETLE   85 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEEccCCCHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999998877777777665432   277899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhh-hccCCCC
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL-LELSDSP  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~-~~~~~~g  161 (298)
                      .++++|++|||||.....+                       ..+.+.+.|++.+++|+.+++.+++++.+. |.+++.+
T Consensus        86 ~~~~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~  142 (259)
T PRK08213         86 RFGHVDILVNNAGATWGAP-----------------------AEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYG  142 (259)
T ss_pred             HhCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCe
Confidence            9999999999999753221                       122467889999999999999999999998 7666668


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      ++|++||..+..+..                                      ...+....|+++|++++.++++++.++
T Consensus       143 ~~v~~sS~~~~~~~~--------------------------------------~~~~~~~~Y~~sKa~~~~~~~~~a~~~  184 (259)
T PRK08213        143 RIINVASVAGLGGNP--------------------------------------PEVMDTIAYNTSKGAVINFTRALAAEW  184 (259)
T ss_pred             EEEEECChhhccCCC--------------------------------------ccccCcchHHHHHHHHHHHHHHHHHHh
Confidence            999999977654320                                      001234789999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCC---------------CCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAG---------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                        .+|++|.|+||+++|++.....               ...+++.+.....++........|..+..+
T Consensus       185 ~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~  253 (259)
T PRK08213        185 GPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAALLLASDASKHITGQILAVD  253 (259)
T ss_pred             cccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEEC
Confidence              4899999999999998753211               124555555555555444444455554443

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.97  E-value=8.4e-30  Score=223.95  Aligned_cols=221  Identities=22%  Similarity=0.267  Sum_probs=178.6

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ++++++|||||+|+||++++++|+++|++|++++|+.+........+...+.   ++.++++|+++.++++++++.+.+.
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~   77 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGG---NAQAFACDITDRDSVDTAVAAAEQA   77 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCC---cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999998877777666665432   3889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      ++++|++|||||.....+                       +.+.+.+.+++.+++|+.+++.+++++.+.|++++.++|
T Consensus        78 ~~~~d~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i  134 (250)
T TIGR03206        78 LGPVDVLVNNAGWDKFGP-----------------------FTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRI  134 (250)
T ss_pred             cCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEE
Confidence            999999999999754321                       122467788899999999999999999999987777899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+.                                          +....|+++|+|++.++++++.++  
T Consensus       135 i~iss~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~  172 (250)
T TIGR03206       135 VNIASDAARVGS------------------------------------------SGEAVYAACKGGLVAFSKTMAREHAR  172 (250)
T ss_pred             EEECchhhccCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHHhH
Confidence            999997765433                                          556789999999999999999998  


Q ss_pred             CCcEEEEeeCCeeecCCCCCC---------------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 PKFCVNCVCPGFVKTDINFHA---------------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~---------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      .+++++.|+||.++|++....                     ...++++.++....++........|..+..
T Consensus       173 ~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~  244 (250)
T TIGR03206       173 HGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQVLSV  244 (250)
T ss_pred             hCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcCcEEEe
Confidence            489999999999999864321                     113566666666666655444445555444

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-30  Score=229.62  Aligned_cols=186  Identities=27%  Similarity=0.294  Sum_probs=150.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc----hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE----KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      .+++|+++||||++|||+++|++|+++|++|++++++.    +..+...++++..+.   ++.++++|+++.++++++++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~   81 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGA---KAVAFQADLTTAAAVEKLFD   81 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCC---cEEEEecCcCCHHHHHHHHH
Confidence            35789999999999999999999999999977766543    234444455544332   37889999999999999999


Q ss_pred             HHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                      .+.+.++++|++|||||.....+                       +.+.+.+.+++.+++|+.+++.++++++|.|+. 
T Consensus        82 ~~~~~~~~id~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-  137 (257)
T PRK12744         82 DAKAAFGRPDIAINTVGKVLKKP-----------------------IVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND-  137 (257)
T ss_pred             HHHHhhCCCCEEEECCcccCCCC-----------------------cccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-
Confidence            99999999999999999754321                       122477889999999999999999999999964 


Q ss_pred             CCCcEEEE-ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH
Q 022357          159 DSPRLVNL-SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       159 ~~g~iv~v-sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l  237 (298)
                       .|+++++ ||..+..                                           .+....|++||+|++.|++++
T Consensus       138 -~~~iv~~~ss~~~~~-------------------------------------------~~~~~~Y~~sK~a~~~~~~~l  173 (257)
T PRK12744        138 -NGKIVTLVTSLLGAF-------------------------------------------TPFYSAYAGSKAPVEHFTRAA  173 (257)
T ss_pred             -CCCEEEEecchhccc-------------------------------------------CCCcccchhhHHHHHHHHHHH
Confidence             3688876 4443321                                           145678999999999999999


Q ss_pred             HHhC--CCcEEEEeeCCeeecCCC
Q 022357          238 AKRY--PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       238 a~e~--~~i~vn~v~PG~v~t~~~  259 (298)
                      +.++  .+|+||+|+||++.|++.
T Consensus       174 a~e~~~~~i~v~~v~pg~v~t~~~  197 (257)
T PRK12744        174 SKEFGARGISVTAVGPGPMDTPFF  197 (257)
T ss_pred             HHHhCcCceEEEEEecCccccchh
Confidence            9998  489999999999999864

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.4e-29  Score=222.71  Aligned_cols=212  Identities=24%  Similarity=0.209  Sum_probs=171.1

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |++..+|++|||||++|||++++++|+++|++|+++++. .+.+....+++...+.   .+.++++|+++.+++.++++.
T Consensus         4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~d~~~~~~~~~~   80 (258)
T PRK09134          4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGR---RAVALQADLADEAEVRALVAR   80 (258)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC---eEEEEEcCCCCHHHHHHHHHH
Confidence            456678999999999999999999999999999887764 4455566666654433   388899999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+.++++|+||||||.....+                       +.+.+.+.+++.+++|+.+++.+++++.+.|+.+.
T Consensus        81 ~~~~~~~iD~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  137 (258)
T PRK09134         81 ASAALGPITLLVNNASLFEYDS-----------------------AASFTRASWDRHMATNLRAPFVLAQAFARALPADA  137 (258)
T ss_pred             HHHHcCCCCEEEECCcCCCCCc-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            9998999999999999764321                       12246788899999999999999999999998766


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .++||+++|..+..+.                                          +....|++||+|+++++++++.
T Consensus       138 ~~~iv~~~s~~~~~~~------------------------------------------p~~~~Y~~sK~a~~~~~~~la~  175 (258)
T PRK09134        138 RGLVVNMIDQRVWNLN------------------------------------------PDFLSYTLSKAALWTATRTLAQ  175 (258)
T ss_pred             CceEEEECchhhcCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHH
Confidence            7899999886543221                                          4456899999999999999999


Q ss_pred             hC-CCcEEEEeeCCeeecCCCCC-------------CCCCChhhhhhhhhhhhcc
Q 022357          240 RY-PKFCVNCVCPGFVKTDINFH-------------AGILSVEEGAESPVKLALL  280 (298)
Q Consensus       240 e~-~~i~vn~v~PG~v~t~~~~~-------------~~~~~~~~~a~~~~~~~~~  280 (298)
                      ++ ++|+||+|+||++.|+....             ....++++.++..+..+..
T Consensus       176 ~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~  230 (258)
T PRK09134        176 ALAPRIRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTPEEIAAAVRYLLDA  230 (258)
T ss_pred             HhcCCcEEEEeecccccCCcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC
Confidence            98 46999999999998854311             1134678888888877764

>PRK07069 short chain dehydrogenase; Validated

Probab=99.97  E-value=2e-30  Score=228.06  Aligned_cols=216  Identities=24%  Similarity=0.276  Sum_probs=172.5

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      ++||||++|||+++++.|+++|++|++++|+ .+.++...+++...... ..+..+++|+++.++++++++.+.+.++++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGE-GVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCC-ceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            8999999999999999999999999999998 66666666666544321 125678899999999999999999999999


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |++|||||......                       +.+.+.+++.+.+++|+.+++.+++.++|.|++++.++||++|
T Consensus        81 d~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~s  137 (251)
T PRK07069         81 SVLVNNAGVGSFGA-----------------------IEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNIS  137 (251)
T ss_pred             cEEEECCCcCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEec
Confidence            99999999764321                       2235778899999999999999999999999887778999999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC----CC
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PK  243 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~----~~  243 (298)
                      |..+..+.                                          ++...|+++|++++.|+++++.++    .+
T Consensus       138 s~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~  175 (251)
T PRK07069        138 SVAAFKAE------------------------------------------PDYTAYNASKAAVASLTKSIALDCARRGLD  175 (251)
T ss_pred             ChhhccCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhcccCCc
Confidence            98776443                                          567789999999999999999997    25


Q ss_pred             cEEEEeeCCeeecCCCCCC--------------------CCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          244 FCVNCVCPGFVKTDINFHA--------------------GILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~~~--------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      |+|+.|+||+++|++....                    ...++++.++..+.++..+....+|..+
T Consensus       176 i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i  242 (251)
T PRK07069        176 VRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGAEL  242 (251)
T ss_pred             EEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccCCEE
Confidence            9999999999999975321                    1235666666666655444444444443

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.97  E-value=1.5e-29  Score=222.80  Aligned_cols=180  Identities=24%  Similarity=0.287  Sum_probs=154.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||+++||++++++|+++|++|++++|+.         +...+   .++.++++|+++.++++++++++.+
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   72 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQED---YPFATFVLDVSDAAAVAQVCQRLLA   72 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcC---CceEEEEecCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999986         11112   2388899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|++|||||.....+                       +.+.+.+++++.+++|+.+++.++++++|.|++++.|+
T Consensus        73 ~~~~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~  129 (252)
T PRK08220         73 ETGPLDVLVNAAGILRMGA-----------------------TDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGA  129 (252)
T ss_pred             HcCCCCEEEECCCcCCCCC-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCE
Confidence            9999999999999764321                       12346788999999999999999999999998777789


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||++++.|++.++.++ 
T Consensus       130 iv~~ss~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~  167 (252)
T PRK08220        130 IVTVGSNAAHVPR------------------------------------------IGMAAYGASKAALTSLAKCVGLELA  167 (252)
T ss_pred             EEEECCchhccCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhh
Confidence            9999997654332                                          556889999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCC
Q 022357          242 -PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~  259 (298)
                       .+|+||.|.||+++|++.
T Consensus       168 ~~~i~v~~i~pg~v~t~~~  186 (252)
T PRK08220        168 PYGVRCNVVSPGSTDTDMQ  186 (252)
T ss_pred             HhCeEEEEEecCcCcchhh
Confidence             589999999999999864

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-29  Score=223.94  Aligned_cols=204  Identities=25%  Similarity=0.217  Sum_probs=171.1

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh-cC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ-FG   85 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~-~g   85 (298)
                      |++|||||+||||++++++|+++|++|++++|+.+.+++....+.  +   ..+.++++|+++.++++++++.+.+. ++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~---~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   76 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--A---GNAWTGALDVTDRAAWDAALADFAAATGG   76 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--C---CceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999887766655544  1   23889999999999999999988776 78


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|+||||||......                       +...+.+++++.+++|+.+++.+++++.+.|+.++.++||+
T Consensus        77 ~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~  133 (260)
T PRK08267         77 RLDVLFNNAGILRGGP-----------------------FEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVIN  133 (260)
T ss_pred             CCCEEEECCCCCCCCc-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            9999999999865321                       12247788999999999999999999999998877799999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK  243 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~  243 (298)
                      +||..+..+.                                          +....|+.||+++++|+++++.++  .+
T Consensus       134 isS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~l~~~~~~~~  171 (260)
T PRK08267        134 TSSASAIYGQ------------------------------------------PGLAVYSATKFAVRGLTEALDLEWRRHG  171 (260)
T ss_pred             eCchhhCcCC------------------------------------------CCchhhHHHHHHHHHHHHHHHHHhcccC
Confidence            9998776543                                          556789999999999999999998  48


Q ss_pred             cEEEEeeCCeeecCCCCC-------------CCCCChhhhhhhhhhhhcc
Q 022357          244 FCVNCVCPGFVKTDINFH-------------AGILSVEEGAESPVKLALL  280 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~~-------------~~~~~~~~~a~~~~~~~~~  280 (298)
                      |++++|.||+++|++...             ....++++.++..+.....
T Consensus       172 i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        172 IRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             cEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHHHhC
Confidence            999999999999987542             1135777888777777643

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.1e-30  Score=228.56  Aligned_cols=223  Identities=20%  Similarity=0.213  Sum_probs=177.7

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|++|||||+|+||++++++|+++|++|++++|+.++.....+++..... ..++.++++|+++.++++++++++.++
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKG-AGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccC-CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999998777766666654322 123888999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      ++++|++|||||......                      ++.+.+.+.+.+.+++|+.+++.+++++++.|.+++.++|
T Consensus        84 ~~~~d~li~~ag~~~~~~----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~i  141 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIG----------------------PITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSF  141 (276)
T ss_pred             cCCCCEEEECCCcccCCC----------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEE
Confidence            999999999999653211                      1123467889999999999999999999999987667899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      +++||..+..+.                                          +....|+++|++++.+++.++.++  
T Consensus       142 v~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~  179 (276)
T PRK05875        142 VGISSIAASNTH------------------------------------------RWFGAYGVTKSAVDHLMKLAADELGP  179 (276)
T ss_pred             EEEechhhcCCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            999997765332                                          456889999999999999999998  


Q ss_pred             CCcEEEEeeCCeeecCCCCCCC-----------------CCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          242 PKFCVNCVCPGFVKTDINFHAG-----------------ILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      .+|+++.|+||+++|++.....                 ..++++.++..+.++..+.....+..+.
T Consensus       180 ~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~  246 (276)
T PRK05875        180 SWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQVIN  246 (276)
T ss_pred             cCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEE
Confidence            5899999999999998753210                 1245667776666666544433444333

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-29  Score=252.37  Aligned_cols=211  Identities=26%  Similarity=0.320  Sum_probs=179.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+.+.+..+++...+..   +.++++|+++.++++++++.+.+
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~~~~~~~~~~~  444 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGT---AHAYTCDLTDSAAVDHTVKDILA  444 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEecCCCHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999998888888877665433   88999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|++|||||........+.                     ..+.+++++.+++|+.|++.++++++|.|++++.|+
T Consensus       445 ~~g~id~li~~Ag~~~~~~~~~~---------------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~  503 (657)
T PRK07201        445 EHGHVDYLVNNAGRSIRRSVENS---------------------TDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGH  503 (657)
T ss_pred             hcCCCCEEEECCCCCCCCChhhc---------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCE
Confidence            99999999999997533211100                     012467889999999999999999999998887899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +..+.|++||+|+++|+++++.|+ 
T Consensus       504 iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~  541 (657)
T PRK07201        504 VVNVSSIGVQTNA------------------------------------------PRFSAYVASKAALDAFSDVAASETL  541 (657)
T ss_pred             EEEECChhhcCCC------------------------------------------CCcchHHHHHHHHHHHHHHHHHHHH
Confidence            9999998765432                                          567889999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC------CCCChhhhhhhhhhhhc
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA------GILSVEEGAESPVKLAL  279 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~------~~~~~~~~a~~~~~~~~  279 (298)
                       .+|+||+|+||+|+|++....      ..++|++.++.++..+.
T Consensus       542 ~~~i~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~a~~i~~~~~  586 (657)
T PRK07201        542 SDGITFTTIHMPLVRTPMIAPTKRYNNVPTISPEEAADMVVRAIV  586 (657)
T ss_pred             hhCCcEEEEECCcCcccccCccccccCCCCCCHHHHHHHHHHHHH
Confidence             589999999999999986532      35789999998887664

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.9e-29  Score=219.57  Aligned_cols=187  Identities=28%  Similarity=0.381  Sum_probs=154.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +|++|||||++|||++++++|+++|++|+++++ +++......+.+...+..   +.++++|+++.++++++++.+.+.+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGE---ALAVAADVADEADVLRLFEAVDREL   78 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCc---EEEEEeccCCHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999988874 444555555566544332   7789999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC---CC
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---SP  161 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g  161 (298)
                      +++|+||||||......                      .+.+.+.+++++.+++|+.+++.+++++++.|.++.   .|
T Consensus        79 ~~id~li~~ag~~~~~~----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g  136 (248)
T PRK06123         79 GRLDALVNNAGILEAQM----------------------RLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGG  136 (248)
T ss_pred             CCCCEEEECCCCCCCCC----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCe
Confidence            99999999999764321                      122357789999999999999999999999997542   47


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCC-CchhhhHHHHHHHHHHHHHHh
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPH-SSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~al~~l~~~la~e  240 (298)
                      +||++||..+..+.                                          +. ...|++||+++++|+++++.+
T Consensus       137 ~iv~~sS~~~~~~~------------------------------------------~~~~~~Y~~sKaa~~~~~~~la~~  174 (248)
T PRK06123        137 AIVNVSSMAARLGS------------------------------------------PGEYIDYAASKGAIDTMTIGLAKE  174 (248)
T ss_pred             EEEEECchhhcCCC------------------------------------------CCCccchHHHHHHHHHHHHHHHHH
Confidence            89999998765432                                          22 356999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~  259 (298)
                      +  .+|+|+.|+||.+.|++.
T Consensus       175 ~~~~~i~v~~i~pg~v~~~~~  195 (248)
T PRK06123        175 VAAEGIRVNAVRPGVIYTEIH  195 (248)
T ss_pred             hcccCeEEEEEecCcccCchh
Confidence            8  589999999999999864

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.4e-29  Score=218.93  Aligned_cols=225  Identities=25%  Similarity=0.298  Sum_probs=180.0

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC----chhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD----EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSL   76 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~   76 (298)
                      |..+++++++||||+||||++++++|+++|++|++++|.    .+...+..+++...+.   .+.++.+|+++.++++++
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~   77 (249)
T PRK12827          1 MASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGG---KALGLAFDVRDFAATRAA   77 (249)
T ss_pred             CCCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHH
Confidence            677888999999999999999999999999999997654    3344444455544332   388999999999999999


Q ss_pred             HHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHh-hhh
Q 022357           77 ADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALI-PLL  155 (298)
Q Consensus        77 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~-~~~  155 (298)
                      ++.+.+.++++|.+|||||......                       +.+.+.+.+.+.+++|+.+++.+++++. +.|
T Consensus        78 ~~~~~~~~~~~d~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  134 (249)
T PRK12827         78 LDAGVEEFGRLDILVNNAGIATDAA-----------------------FAELSIEEWDDVIDVNLDGFFNVTQAALPPMI  134 (249)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence            9999988899999999999865321                       1124677889999999999999999999 777


Q ss_pred             ccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHH
Q 022357          156 ELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTR  235 (298)
Q Consensus       156 ~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~  235 (298)
                      ++++.+++|++||..+..+.                                          ++...|+.+|++++.+++
T Consensus       135 ~~~~~~~iv~~sS~~~~~~~------------------------------------------~~~~~y~~sK~a~~~~~~  172 (249)
T PRK12827        135 RARRGGRIVNIASVAGVRGN------------------------------------------RGQVNYAASKAGLIGLTK  172 (249)
T ss_pred             hcCCCeEEEEECCchhcCCC------------------------------------------CCCchhHHHHHHHHHHHH
Confidence            66666899999998776443                                          556789999999999999


Q ss_pred             HHHHhC--CCcEEEEeeCCeeecCCCCCC-------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          236 ILAKRY--PKFCVNCVCPGFVKTDINFHA-------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       236 ~la~e~--~~i~vn~v~PG~v~t~~~~~~-------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +++.++  .+++++.|+||+++|++....             ...++++.++..+..........+|.++...
T Consensus       173 ~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~  245 (249)
T PRK12827        173 TLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALVAFLVSDAASYVTGQVIPVD  245 (249)
T ss_pred             HHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcCHHHHHHHHHHHcCcccCCccCcEEEeC
Confidence            999998  489999999999999875431             1237788888777777655556666666553

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.3e-29  Score=223.53  Aligned_cols=211  Identities=26%  Similarity=0.330  Sum_probs=174.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++|++|||||+||||++++++|+++|++|++++|+.+..+...+++...+.+ ..+.++.+|+++.+++++ ++.+.+.+
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQ-QNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCC-CceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            4689999999999999999999999999999999988777776666543321 238899999999999999 88888889


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      +++|++|||||.......                       .+.+.+.+++.+++|+.+++.+++.++|.|++.+.++||
T Consensus        80 ~~id~vv~~ag~~~~~~~-----------------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv  136 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFV-----------------------EEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKII  136 (280)
T ss_pred             CCeeEEEECCcccccCcc-----------------------ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEE
Confidence            999999999997654311                       124678889999999999999999999999877778999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||..+..+.                                          +....|++||+++++|+++++.++  .
T Consensus       137 ~vsS~~~~~~~------------------------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~  174 (280)
T PRK06914        137 NISSISGRVGF------------------------------------------PGLSPYVSSKYALEGFSESLRLELKPF  174 (280)
T ss_pred             EECcccccCCC------------------------------------------CCCchhHHhHHHHHHHHHHHHHHhhhh
Confidence            99997765443                                          557789999999999999999887  4


Q ss_pred             CcEEEEeeCCeeecCCCCCC------------------------------CCCChhhhhhhhhhhhccCC
Q 022357          243 KFCVNCVCPGFVKTDINFHA------------------------------GILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~~------------------------------~~~~~~~~a~~~~~~~~~~~  282 (298)
                      +|+|+.|+||+++|++....                              .+.++++.+...+..+..++
T Consensus       175 ~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  244 (280)
T PRK06914        175 GIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEIAESKR  244 (280)
T ss_pred             CCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHcCCC
Confidence            89999999999999964310                              12477888888777777654

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.7e-29  Score=219.95  Aligned_cols=210  Identities=31%  Similarity=0.404  Sum_probs=169.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |.++++++++||||+||||+++|++|+++|++|++. .|+.++++...+.+...+.   .+.++++|+++.+++.++++.
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~d~~~i~~~~~~   77 (254)
T PRK12746          1 MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGG---KAFLIEADLNSIDGVKKLVEQ   77 (254)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC---cEEEEEcCcCCHHHHHHHHHH
Confidence            778889999999999999999999999999999875 6877666666666654332   278899999999999999999


Q ss_pred             HHHhc------CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhh
Q 022357           80 IKTQF------GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP  153 (298)
Q Consensus        80 ~~~~~------g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  153 (298)
                      +.+++      +++|++|||||......                       +.+.+.+.+++.+++|+.+++++++.+++
T Consensus        78 ~~~~~~~~~~~~~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  134 (254)
T PRK12746         78 LKNELQIRVGTSEIDILVNNAGIGTQGT-----------------------IENTTEEIFDEIMAVNIKAPFFLIQQTLP  134 (254)
T ss_pred             HHHHhccccCCCCccEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            98877      47999999999754321                       12357788899999999999999999999


Q ss_pred             hhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHH
Q 022357          154 LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAY  233 (298)
Q Consensus       154 ~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l  233 (298)
                      .|++  .+++|++||..+..+.                                          ++...|++||+|++.+
T Consensus       135 ~~~~--~~~~v~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~  170 (254)
T PRK12746        135 LLRA--EGRVINISSAEVRLGF------------------------------------------TGSIAYGLSKGALNTM  170 (254)
T ss_pred             Hhhc--CCEEEEECCHHhcCCC------------------------------------------CCCcchHhhHHHHHHH
Confidence            9854  3799999997665332                                          5677899999999999


Q ss_pred             HHHHHHhC--CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhcc
Q 022357          234 TRILAKRY--PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALL  280 (298)
Q Consensus       234 ~~~la~e~--~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~  280 (298)
                      +++++.++  .+++|+.|+||+++|++....                 ...++++.++........
T Consensus       171 ~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  236 (254)
T PRK12746        171 TLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASS  236 (254)
T ss_pred             HHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCc
Confidence            99999997  589999999999999875321                 123566767666555543

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=5.5e-29  Score=218.07  Aligned_cols=224  Identities=30%  Similarity=0.337  Sum_probs=186.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+++|++|||||+|+||++++++|+++|++|+++ +|+.+......+.+...+.   .+.++.+|+++.++++++++.+.
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGG---DAIAVKADVSSEEDVENLVEQIV   78 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHHHH
Confidence            4678899999999999999999999999999998 8988777777776665322   38899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +.++++|++|||+|.....                       .+.+.+.+.+++.+++|+.+++.+++.++|.+.+++.+
T Consensus        79 ~~~~~id~vi~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  135 (247)
T PRK05565         79 EKFGKIDILVNNAGISNFG-----------------------LVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSG  135 (247)
T ss_pred             HHhCCCCEEEECCCcCCCC-----------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc
Confidence            9899999999999976322                       11235778899999999999999999999999877778


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      ++|++||..+..+.                                          +....|+.+|++++.++++++.++
T Consensus       136 ~~v~~sS~~~~~~~------------------------------------------~~~~~y~~sK~a~~~~~~~~~~~~  173 (247)
T PRK05565        136 VIVNISSIWGLIGA------------------------------------------SCEVLYSASKGAVNAFTKALAKEL  173 (247)
T ss_pred             EEEEECCHhhccCC------------------------------------------CCccHHHHHHHHHHHHHHHHHHHH
Confidence            99999997765443                                          456789999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                        .+++++.|+||+++|++....               ...++++.++..+..+.......+|.++..+.
T Consensus       174 ~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~  243 (247)
T PRK05565        174 APSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQIITVDG  243 (247)
T ss_pred             HHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEecC
Confidence              599999999999999865432               12467888888888887777777887776543

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.97  E-value=5.2e-29  Score=219.39  Aligned_cols=207  Identities=23%  Similarity=0.271  Sum_probs=169.5

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++++||||+||||++++++|+++|++|++++|+++++....+.+.   .   .+.++.+|+++.++++++++.+.+.+++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   74 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---D---NLYIAQLDVRNRAAIEEMLASLPAEWRN   74 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---c---ceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            369999999999999999999999999999999877665554432   1   2788999999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|++|||||......                      +..+.+.+.+++.+++|+.+++.+++.++|.|++++.++||++
T Consensus        75 id~vi~~ag~~~~~~----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i  132 (248)
T PRK10538         75 IDVLVNNAGLALGLE----------------------PAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINI  132 (248)
T ss_pred             CCEEEECCCccCCCC----------------------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence            999999999753211                      1123477889999999999999999999999987777899999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CCc
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKF  244 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~i  244 (298)
                      ||..+..+.                                          +....|+++|+++++|++.++.++  .+|
T Consensus       133 sS~~~~~~~------------------------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i  170 (248)
T PRK10538        133 GSTAGSWPY------------------------------------------AGGNVYGATKAFVRQFSLNLRTDLHGTAV  170 (248)
T ss_pred             CCcccCCCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhcCCCc
Confidence            997665332                                          556789999999999999999998  589


Q ss_pred             EEEEeeCCeeecCCC-C---------------CCCCCChhhhhhhhhhhhccCCC
Q 022357          245 CVNCVCPGFVKTDIN-F---------------HAGILSVEEGAESPVKLALLPDG  283 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~-~---------------~~~~~~~~~~a~~~~~~~~~~~~  283 (298)
                      +||+|+||++.|+.. .               ...+.+|++.|+..+..+..+..
T Consensus       171 ~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~  225 (248)
T PRK10538        171 RVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVATLPAH  225 (248)
T ss_pred             EEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHHhcCCCc
Confidence            999999999984432 1               01245788888888887766553

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.1e-29  Score=215.82  Aligned_cols=222  Identities=29%  Similarity=0.330  Sum_probs=183.7

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+++++||||+|+||++++++|+++|++|++++|++.++.....++...    ..+.++++|+++.++++++++.+
T Consensus         1 m~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~D~~~~~~~~~~~~~~   76 (237)
T PRK07326          1 MMSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK----GNVLGLAADVRDEADVQRAVDAI   76 (237)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc----CcEEEEEccCCCHHHHHHHHHHH
Confidence            67778899999999999999999999999999999999988777777766543    23889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||+|.....                       .+.+.+.+.+.+.+++|+.+++.+++++++.|+ ++.
T Consensus        77 ~~~~~~~d~vi~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~  132 (237)
T PRK07326         77 VAAFGGLDVLIANAGVGHFA-----------------------PVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RGG  132 (237)
T ss_pred             HHHcCCCCEEEECCCCCCCC-----------------------chhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HCC
Confidence            99999999999999875432                       122357788999999999999999999999984 345


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+..+.                                          .....|+++|++++++++.++.+
T Consensus       133 ~~iv~~ss~~~~~~~------------------------------------------~~~~~y~~sk~a~~~~~~~~~~~  170 (237)
T PRK07326        133 GYIINISSLAGTNFF------------------------------------------AGGAAYNASKFGLVGFSEAAMLD  170 (237)
T ss_pred             eEEEEECChhhccCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHH
Confidence            899999997654332                                          45678999999999999999998


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCC------CCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAG------ILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +  .++++++|.||++.|++....+      ..++++.++..+..+..+.......+.+.
T Consensus       171 ~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~~~  230 (237)
T PRK07326        171 LRQYGIKVSTIMPGSVATHFNGHTPSEKDAWKIQPEDIAQLVLDLLKMPPRTLPSKIEVR  230 (237)
T ss_pred             hcccCcEEEEEeeccccCcccccccchhhhccCCHHHHHHHHHHHHhCCccccccceEEe
Confidence            8  5999999999999998754321      26788999999888887765555544443

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.5e-29  Score=218.95  Aligned_cols=206  Identities=26%  Similarity=0.280  Sum_probs=171.1

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      |+++||||+||||++++++|+++|++|++++|++++.....+++......  ++.++++|+++.++++++++.+.+   .
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~---~   76 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAV--AVSTHELDILDTASHAAFLDSLPA---L   76 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCC--eEEEEecCCCChHHHHHHHHHHhh---c
Confidence            68999999999999999999999999999999988777777666554322  388999999999999999887754   4


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|++|||+|......                       ..+.+.+++.+.+++|+.+++++++.+.|.|.+++.+++|++
T Consensus        77 ~d~vv~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~  133 (243)
T PRK07102         77 PDIVLIAVGTLGDQA-----------------------ACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGI  133 (243)
T ss_pred             CCEEEECCcCCCCcc-----------------------cccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            699999999754321                       123467888899999999999999999999987777999999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CCc
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKF  244 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~i  244 (298)
                      ||..+..+.                                          +....|+++|+++.+++++++.++  .+|
T Consensus       134 sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~el~~~gi  171 (243)
T PRK07102        134 SSVAGDRGR------------------------------------------ASNYVYGSAKAALTAFLSGLRNRLFKSGV  171 (243)
T ss_pred             ecccccCCC------------------------------------------CCCcccHHHHHHHHHHHHHHHHHhhccCc
Confidence            998765432                                          556789999999999999999998  489


Q ss_pred             EEEEeeCCeeecCCCCCC-----CCCChhhhhhhhhhhhccCC
Q 022357          245 CVNCVCPGFVKTDINFHA-----GILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~~-----~~~~~~~~a~~~~~~~~~~~  282 (298)
                      +|++|+||+++|++....     ...++++.++..+......+
T Consensus       172 ~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~  214 (243)
T PRK07102        172 HVLTVKPGFVRTPMTAGLKLPGPLTAQPEEVAKDIFRAIEKGK  214 (243)
T ss_pred             EEEEEecCcccChhhhccCCCccccCCHHHHHHHHHHHHhCCC
Confidence            999999999999975432     24688999988887776543

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.1e-29  Score=223.17  Aligned_cols=180  Identities=29%  Similarity=0.354  Sum_probs=153.8

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      |++|||||+||||++++++|+++|++|++++|+.+++...    ...+     +.++.+|+++.++++++++.+.+.+++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~~~-----~~~~~~Dl~~~~~~~~~~~~~~~~~~~   72 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL----AAAG-----FTAVQLDVNDGAALARLAEELEAEHGG   72 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHCC-----CeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            6899999999999999999999999999999987654433    2211     678899999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|++|||||.....+                       +.+.+.+.+++.+++|+.+++.+++.++|.|+++ .|+||++
T Consensus        73 id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~i  128 (274)
T PRK05693         73 LDVLINNAGYGAMGP-----------------------LLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNI  128 (274)
T ss_pred             CCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEE
Confidence            999999999764321                       2235778899999999999999999999999754 4899999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CCc
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKF  244 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~i  244 (298)
                      ||..+..+.                                          +....|++||++++.|+++++.|+  .||
T Consensus       129 sS~~~~~~~------------------------------------------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi  166 (274)
T PRK05693        129 GSVSGVLVT------------------------------------------PFAGAYCASKAAVHALSDALRLELAPFGV  166 (274)
T ss_pred             CCccccCCC------------------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhhCe
Confidence            998776443                                          556789999999999999999998  589


Q ss_pred             EEEEeeCCeeecCCCCC
Q 022357          245 CVNCVCPGFVKTDINFH  261 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~  261 (298)
                      +|++|+||+|+|++...
T Consensus       167 ~v~~v~pg~v~t~~~~~  183 (274)
T PRK05693        167 QVMEVQPGAIASQFASN  183 (274)
T ss_pred             EEEEEecCccccccccc
Confidence            99999999999997643

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.97  E-value=7.8e-29  Score=216.98  Aligned_cols=218  Identities=25%  Similarity=0.293  Sum_probs=171.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .|+++||||++|||+++|++|+++|++|++++|+... ..+....+...   ..++.++++|+++.++++++++.+.+.+
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFT---EDQVRLKELDVTDTEECAEALAEIEEEE   78 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhcc---CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3689999999999999999999999999999998542 22222222222   2248899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      +++|++|||||......                       +.+.+.+.+++.+++|+.++++++++++|.|++.+.++||
T Consensus        79 ~~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv  135 (245)
T PRK12824         79 GPVDILVNNAGITRDSV-----------------------FKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRII  135 (245)
T ss_pred             CCCCEEEECCCCCCCCc-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEE
Confidence            99999999999764321                       1235788999999999999999999999999877778999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||..+..+.                                          ++...|++||+|+++|+++++.++  .
T Consensus       136 ~iss~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~  173 (245)
T PRK12824        136 NISSVNGLKGQ------------------------------------------FGQTNYSAAKAGMIGFTKALASEGARY  173 (245)
T ss_pred             EECChhhccCC------------------------------------------CCChHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99997765432                                          567889999999999999999988  5


Q ss_pred             CcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          243 KFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      +++++.|+||.+.|++....               ...++++.++....++.......+|..+.
T Consensus       174 ~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~  237 (245)
T PRK12824        174 GITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETIS  237 (245)
T ss_pred             CeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEE
Confidence            89999999999999875421               13366666666665554433334444443

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.97  E-value=1.3e-29  Score=221.57  Aligned_cols=186  Identities=26%  Similarity=0.346  Sum_probs=157.8

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      |++|||||+||||++++++|+++|++|+++.| +.........++...+.   ++.++.+|++++++++++++.+.+.++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGF---DFRVVEGDVSSFESCKAAVAKVEAELG   77 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCC---ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999988 55555555555543332   388999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|+||||||......                       +.+.+.+.+++.+++|+.+++.+++.++|.|++++.++||+
T Consensus        78 ~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~  134 (242)
T TIGR01829        78 PIDVLVNNAGITRDAT-----------------------FKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIIN  134 (242)
T ss_pred             CCcEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            9999999999764321                       12357788999999999999999999999998777789999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK  243 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~  243 (298)
                      +||..+..+.                                          ++...|+++|++++.|+++++.++  .+
T Consensus       135 iss~~~~~~~------------------------------------------~~~~~y~~sk~a~~~~~~~la~~~~~~~  172 (242)
T TIGR01829       135 ISSVNGQKGQ------------------------------------------FGQTNYSAAKAGMIGFTKALAQEGATKG  172 (242)
T ss_pred             EcchhhcCCC------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhhC
Confidence            9997765432                                          456789999999999999999998  59


Q ss_pred             cEEEEeeCCeeecCCCC
Q 022357          244 FCVNCVCPGFVKTDINF  260 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~  260 (298)
                      +++|.|+||++.|++..
T Consensus       173 i~v~~i~pg~~~t~~~~  189 (242)
T TIGR01829       173 VTVNTISPGYIATDMVM  189 (242)
T ss_pred             eEEEEEeeCCCcCcccc
Confidence            99999999999998754

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-28  Score=220.29  Aligned_cols=211  Identities=25%  Similarity=0.298  Sum_probs=174.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|+++||||+|+||++++++|+++|++|++++|+.+.+.+..+++...+.   .+.++.+|+++.+++.++++.+.+
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~   83 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGG---EAVAFPLDVTDPDSVKSFVAQAEE   83 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHHHHH
Confidence            45568999999999999999999999999999999988776666666655443   278889999999999999999998


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|++|||||.......                       .+.+.+.+++.+++|+.+++++++.++|.|+++..++
T Consensus        84 ~~~~id~vi~~Ag~~~~~~~-----------------------~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~  140 (274)
T PRK07775         84 ALGEIEVLVSGAGDTYFGKL-----------------------HEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGD  140 (274)
T ss_pred             hcCCCCEEEECCCcCCCccc-----------------------ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCce
Confidence            88999999999997643211                       1246678889999999999999999999998766789


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|+.+|++++.+++.++.++ 
T Consensus       141 iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~l~~~~~~~~~  178 (274)
T PRK07775        141 LIFVGSDVALRQR------------------------------------------PHMGAYGAAKAGLEAMVTNLQMELE  178 (274)
T ss_pred             EEEECChHhcCCC------------------------------------------CCcchHHHHHHHHHHHHHHHHHHhc
Confidence            9999997665432                                          456789999999999999999988 


Q ss_pred             -CCcEEEEeeCCeeecCCCCC---------------------CCCCChhhhhhhhhhhhccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFH---------------------AGILSVEEGAESPVKLALLP  281 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~---------------------~~~~~~~~~a~~~~~~~~~~  281 (298)
                       .+|++++|+||+++|++...                     .....+++.++..+.++..+
T Consensus       179 ~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        179 GTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETP  240 (274)
T ss_pred             ccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCC
Confidence             58999999999999885321                     12457888888888777654

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=8.5e-29  Score=218.44  Aligned_cols=221  Identities=26%  Similarity=0.318  Sum_probs=172.7

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +|+++||||+||||++++++|+++|++|++++|+.. ......+.++..+.   ++.++++|+++.+++.++++.+.+.+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGV---EVIFFPADVADLSAHEAMLDAAQAAW   78 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCC---ceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            479999999999999999999999999999998753 44455555554332   38899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-----
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-----  159 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----  159 (298)
                      +++|++|||||......                     .++.+.+.+.+++.+++|+.+++.+++++.+.|+++.     
T Consensus        79 ~~id~vi~~ag~~~~~~---------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~  137 (256)
T PRK12745         79 GRIDCLVNNAGVGVKVR---------------------GDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEEL  137 (256)
T ss_pred             CCCCEEEECCccCCCCC---------------------CChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCC
Confidence            99999999999764321                     1223357788999999999999999999999997654     


Q ss_pred             -CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          160 -SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       160 -~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                       .++||++||..+..+.                                          +....|+.||+++++|+++++
T Consensus       138 ~~~~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~l~  175 (256)
T PRK12745        138 PHRSIVFVSSVNAIMVS------------------------------------------PNRGEYCISKAGLSMAAQLFA  175 (256)
T ss_pred             CCcEEEEECChhhccCC------------------------------------------CCCcccHHHHHHHHHHHHHHH
Confidence             3579999998775443                                          456789999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      .++  .+++|+.|+||++.|++....                .+.++++.++..............|.++..
T Consensus       176 ~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i  247 (256)
T PRK12745        176 ARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAALASGDLPYSTGQAIHV  247 (256)
T ss_pred             HHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCcccccCCCEEEE
Confidence            987  589999999999999865321                123566666666555543333344555443

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=3.6e-30  Score=224.51  Aligned_cols=176  Identities=28%  Similarity=0.333  Sum_probs=146.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++|+++||||++|||++++++|+++|++|++++|+.....         .   .++.++++|+++.      ++++.+
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~---------~---~~~~~~~~D~~~~------~~~~~~   63 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL---------S---GNFHFLQLDLSDD------LEPLFD   63 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc---------C---CcEEEEECChHHH------HHHHHH
Confidence            467899999999999999999999999999999999854310         1   1378899999987      444455


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|++|||||.....                      .++.+.+.+++++.+++|+.+++.++++++|.|++++.|+
T Consensus        64 ~~~~id~lv~~ag~~~~~----------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  121 (235)
T PRK06550         64 WVPSVDILCNTAGILDDY----------------------KPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGI  121 (235)
T ss_pred             hhCCCCEEEECCCCCCCC----------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcE
Confidence            668999999999975321                      1122357788999999999999999999999998777799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|+.+|+++++++++++.++ 
T Consensus       122 iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~~~~  159 (235)
T PRK06550        122 IINMCSIASFVAG------------------------------------------GGGAAYTASKHALAGFTKQLALDYA  159 (235)
T ss_pred             EEEEcChhhccCC------------------------------------------CCCcccHHHHHHHHHHHHHHHHHhh
Confidence            9999998776432                                          557889999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~  260 (298)
                       .+|+||.|+||+++|++..
T Consensus       160 ~~gi~v~~v~pg~v~t~~~~  179 (235)
T PRK06550        160 KDGIQVFGIAPGAVKTPMTA  179 (235)
T ss_pred             hcCeEEEEEeeCCccCcccc
Confidence             4899999999999999753

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=9.4e-29  Score=217.53  Aligned_cols=211  Identities=28%  Similarity=0.317  Sum_probs=172.1

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |+.+.++++|||||+|+||++++++|+++|++|++..|+ .+........++..+..   +..+.+|+++.+++.++++.
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~   77 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGE---GIGVLADVSTREGCETLAKA   77 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCe---eEEEEeccCCHHHHHHHHHH
Confidence            777888999999999999999999999999999887764 34444555555544332   77899999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+.++++|++|||||.....+.                       .+.+.+.+++.+++|+.+++.+++++.|.|++  
T Consensus        78 ~~~~~~~~d~vi~~ag~~~~~~~-----------------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--  132 (252)
T PRK06077         78 TIDRYGVADILVNNAGLGLFSPF-----------------------LNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--  132 (252)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCh-----------------------hhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--
Confidence            99999999999999997543321                       12456677899999999999999999999964  


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .++||++||..+..+.                                          ++...|++||+++++++++++.
T Consensus       133 ~~~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~~~~~~~~~l~~  170 (252)
T PRK06077        133 GGAIVNIASVAGIRPA------------------------------------------YGLSIYGAMKAAVINLTKYLAL  170 (252)
T ss_pred             CcEEEEEcchhccCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHH
Confidence            3799999998776433                                          5678999999999999999999


Q ss_pred             hC-CCcEEEEeeCCeeecCCCCCC-------------------CCCChhhhhhhhhhhhccC
Q 022357          240 RY-PKFCVNCVCPGFVKTDINFHA-------------------GILSVEEGAESPVKLALLP  281 (298)
Q Consensus       240 e~-~~i~vn~v~PG~v~t~~~~~~-------------------~~~~~~~~a~~~~~~~~~~  281 (298)
                      ++ ++++++.|.||+++|++....                   ...++++.++..+.++..+
T Consensus       171 ~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~  232 (252)
T PRK06077        171 ELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIE  232 (252)
T ss_pred             HHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCcc
Confidence            98 689999999999999864210                   2367888888888877533

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=6.1e-30  Score=212.25  Aligned_cols=183  Identities=31%  Similarity=0.399  Sum_probs=158.0

Q ss_pred             CCcEEEEeCCC-CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH-
Q 022357            5 TKKYAVVTGSN-KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT-   82 (298)
Q Consensus         5 ~~~~vlITGas-~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~-   82 (298)
                      ..|.++|||++ ||||.+++++|++.|+.|+.+.|..+...++.....        +....+|++++++|.++..++++ 
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~g--------l~~~kLDV~~~~~V~~v~~evr~~   77 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFG--------LKPYKLDVSKPEEVVTVSGEVRAN   77 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhC--------CeeEEeccCChHHHHHHHHHHhhC
Confidence            35788998865 899999999999999999999999876555443321        88899999999999999999998 


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .+|++|+|+||||..=..+..                       +.+++..+++|++|++|.+++++++...+. +.+|.
T Consensus        78 ~~Gkld~L~NNAG~~C~~Pa~-----------------------d~~i~ave~~f~vNvfG~irM~~a~~h~li-kaKGt  133 (289)
T KOG1209|consen   78 PDGKLDLLYNNAGQSCTFPAL-----------------------DATIAAVEQCFKVNVFGHIRMCRALSHFLI-KAKGT  133 (289)
T ss_pred             CCCceEEEEcCCCCCcccccc-----------------------cCCHHHHHhhhccceeeeehHHHHHHHHHH-Hccce
Confidence            779999999999986554433                       358899999999999999999999996554 45699


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++.|..+..+.                                          ++.++|.+||+|++++++.|+.|+ 
T Consensus       134 IVnvgSl~~~vpf------------------------------------------pf~~iYsAsKAAihay~~tLrlEl~  171 (289)
T KOG1209|consen  134 IVNVGSLAGVVPF------------------------------------------PFGSIYSASKAAIHAYARTLRLELK  171 (289)
T ss_pred             EEEecceeEEecc------------------------------------------chhhhhhHHHHHHHHhhhhcEEeee
Confidence            9999998887554                                          889999999999999999999999 


Q ss_pred             C-CcEEEEeeCCeeecCCCCC
Q 022357          242 P-KFCVNCVCPGFVKTDINFH  261 (298)
Q Consensus       242 ~-~i~vn~v~PG~v~t~~~~~  261 (298)
                      | ||+|..+.||.|.|++.+.
T Consensus       172 PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  172 PFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             ccccEEEEecccceecccccC
Confidence            3 9999999999999987654

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.97  E-value=2.9e-29  Score=220.51  Aligned_cols=188  Identities=30%  Similarity=0.399  Sum_probs=164.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ...+|.|+|||+.+|+|+.+|++|.++|++|++.+.+++..+.+..+..     ..+...+++|++++++|+++.+.+.+
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~-----s~rl~t~~LDVT~~esi~~a~~~V~~  100 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK-----SPRLRTLQLDVTKPESVKEAAQWVKK  100 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc-----CCcceeEeeccCCHHHHHHHHHHHHH
Confidence            3567999999999999999999999999999999988877777766664     22488889999999999999999998


Q ss_pred             hcC--CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           83 QFG--KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        83 ~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      +.+  .+=.||||||+....                 ++.+|     .+.+++++.+++|++|++.++++++|++++.+ 
T Consensus       101 ~l~~~gLwglVNNAGi~~~~-----------------g~~ew-----l~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-  157 (322)
T KOG1610|consen  101 HLGEDGLWGLVNNAGISGFL-----------------GPDEW-----LTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-  157 (322)
T ss_pred             hcccccceeEEecccccccc-----------------Ccccc-----ccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-
Confidence            764  578899999987654                 33344     58899999999999999999999999998765 


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ||||++||+.|-.+.                                          |....|++||+|++.|+-+|+.|
T Consensus       158 GRvVnvsS~~GR~~~------------------------------------------p~~g~Y~~SK~aVeaf~D~lR~E  195 (322)
T KOG1610|consen  158 GRVVNVSSVLGRVAL------------------------------------------PALGPYCVSKFAVEAFSDSLRRE  195 (322)
T ss_pred             CeEEEecccccCccC------------------------------------------cccccchhhHHHHHHHHHHHHHH
Confidence            899999998886543                                          77889999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      +  -||.|..|.||.+.|++..
T Consensus       196 L~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  196 LRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             HHhcCcEEEEeccCccccccCC
Confidence            9  4999999999999999875

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.97  E-value=1.1e-28  Score=216.67  Aligned_cols=225  Identities=27%  Similarity=0.277  Sum_probs=183.0

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |.++++|+++||||+|+||++++++|+++|++|++++|+.++......++...+..   +.++.+|+++.++++++++.+
T Consensus         1 ~~~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dl~~~~~~~~~~~~~   77 (251)
T PRK12826          1 TRDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGK---ARARQVDVRDRAALKAAVAAG   77 (251)
T ss_pred             CCCCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---EEEEECCCCCHHHHHHHHHHH
Confidence            67788999999999999999999999999999999999987777777777654432   888999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|++|||+|.....+                       +.+.+.+.+.+.+++|+.+++.+++.++|.|.+++.
T Consensus        78 ~~~~~~~d~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  134 (251)
T PRK12826         78 VEDFGRLDILVANAGIFPLTP-----------------------FAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGG  134 (251)
T ss_pred             HHHhCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence            999999999999998765421                       123467888899999999999999999999987777


Q ss_pred             CcEEEEccCccc-ccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          161 PRLVNLSSYVSA-LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       161 g~iv~vsS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      +++|++||..+. .+                                          .+....|+++|++++++++.++.
T Consensus       135 ~~ii~~ss~~~~~~~------------------------------------------~~~~~~y~~sK~a~~~~~~~~~~  172 (251)
T PRK12826        135 GRIVLTSSVAGPRVG------------------------------------------YPGLAHYAASKAGLVGFTRALAL  172 (251)
T ss_pred             cEEEEEechHhhccC------------------------------------------CCCccHHHHHHHHHHHHHHHHHH
Confidence            899999997664 22                                          15567899999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      ++  .+++++.|.||.+.|+.....                .+.++++.++........+.....|..|...
T Consensus       173 ~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~  244 (251)
T PRK12826        173 ELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTLPVD  244 (251)
T ss_pred             HHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcEEEEC
Confidence            87  589999999999999854221                1356778777777766544433445555443

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.6e-29  Score=215.24  Aligned_cols=214  Identities=24%  Similarity=0.297  Sum_probs=171.5

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      |+++||||+||||++++++|+++|++|++++|++.+.... .+   ..    .+.++.+|+++.++++++++.+..  ++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~---~~----~~~~~~~D~~d~~~~~~~~~~~~~--~~   71 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QA---LP----GVHIEKLDMNDPASLDQLLQRLQG--QR   71 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-Hh---cc----ccceEEcCCCCHHHHHHHHHHhhc--CC
Confidence            6899999999999999999999999999999998764432 22   11    167788999999999999988754  47


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+||||||...+..                     ..+.+.+.+++++.+++|+.+++.++++++|.|+.. .++++++
T Consensus        72 id~vi~~ag~~~~~~---------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~  129 (225)
T PRK08177         72 FDLLFVNAGISGPAH---------------------QSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFM  129 (225)
T ss_pred             CCEEEEcCcccCCCC---------------------CCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEE
Confidence            999999999864321                     011235678889999999999999999999999743 4789999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CCc
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKF  244 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~i  244 (298)
                      ||..+..+.                                       .+......|+++|++++.|++.++.++  ++|
T Consensus       130 ss~~g~~~~---------------------------------------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i  170 (225)
T PRK08177        130 SSQLGSVEL---------------------------------------PDGGEMPLYKASKAALNSMTRSFVAELGEPTL  170 (225)
T ss_pred             ccCcccccc---------------------------------------CCCCCccchHHHHHHHHHHHHHHHHHhhcCCe
Confidence            997765432                                       111345679999999999999999998  589


Q ss_pred             EEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      +||+|+||+++|++.......++++.+..++...........+.++.
T Consensus       171 ~v~~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (225)
T PRK08177        171 TVLSMHPGWVKTDMGGDNAPLDVETSVKGLVEQIEAASGKGGHRFID  217 (225)
T ss_pred             EEEEEcCCceecCCCCCCCCCCHHHHHHHHHHHHHhCCccCCCceeC
Confidence            99999999999999877667888999888888887766656665543

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.96  E-value=1e-28  Score=215.44  Aligned_cols=216  Identities=22%  Similarity=0.281  Sum_probs=166.6

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++++||||++|||++++++|+++|  ..|++.+|+....      .   .  ...+.++++|+++.++++++.    +.+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~---~--~~~~~~~~~Dls~~~~~~~~~----~~~   65 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F---Q--HDNVQWHALDVTDEAEIKQLS----EQF   65 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c---c--cCceEEEEecCCCHHHHHHHH----Hhc
Confidence            479999999999999999999985  6677777765321      1   1  123788999999999987753    456


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      +++|+||||||........                 ....+...+.+.+.+.+++|+.+++.+++.++|.|++++.++|+
T Consensus        66 ~~id~li~~aG~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~  128 (235)
T PRK09009         66 TQLDWLINCVGMLHTQDKG-----------------PEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFA  128 (235)
T ss_pred             CCCCEEEECCccccccccC-----------------cccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEE
Confidence            8999999999987532100                 01123346778899999999999999999999999877778999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC---
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY---  241 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~---  241 (298)
                      ++||..+....                                       ...+....|+++|+|+++|+++|+.|+   
T Consensus       129 ~iss~~~~~~~---------------------------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~  169 (235)
T PRK09009        129 VISAKVGSISD---------------------------------------NRLGGWYSYRASKAALNMFLKTLSIEWQRS  169 (235)
T ss_pred             EEeeccccccc---------------------------------------CCCCCcchhhhhHHHHHHHHHHHHHHhhcc
Confidence            99986654221                                       112456789999999999999999997   


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC-------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA-------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~-------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                       ++|+||+|+||+|+|++....       .+.+|++.++..+..+.......+|.++...
T Consensus       170 ~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~  229 (235)
T PRK09009        170 LKHGVVLALHPGTTDTALSKPFQQNVPKGKLFTPEYVAQCLLGIIANATPAQSGSFLAYD  229 (235)
T ss_pred             cCCeEEEEEcccceecCCCcchhhccccCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeC
Confidence             389999999999999986432       2568999999999988876656677766443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2e-28  Score=218.84  Aligned_cols=183  Identities=25%  Similarity=0.291  Sum_probs=155.2

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .|++|||||+||||++++++|+++|++|++++|+++......+...    .  .+.++++|+++.++++++++++.+.++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYG----D--RLWVLQLDVTDSAAVRAVVDRAFAALG   75 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc----C--ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999766554433321    1  378899999999999999999988889


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|+||||||.....+.                       .+.+.+.+++.+++|+.++++++++++|.|++++.++||+
T Consensus        76 ~id~vi~~ag~~~~~~~-----------------------~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~  132 (276)
T PRK06482         76 RIDVVVSNAGYGLFGAA-----------------------EELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQ  132 (276)
T ss_pred             CCCEEEECCCCCCCccc-----------------------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            99999999998754321                       1236678889999999999999999999998777789999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK  243 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~  243 (298)
                      +||..+..+.                                          +....|++||++++.|+++++.++  .+
T Consensus       133 ~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~g  170 (276)
T PRK06482        133 VSSEGGQIAY------------------------------------------PGFSLYHATKWGIEGFVEAVAQEVAPFG  170 (276)
T ss_pred             EcCcccccCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhccC
Confidence            9997654322                                          557899999999999999999997  49


Q ss_pred             cEEEEeeCCeeecCCC
Q 022357          244 FCVNCVCPGFVKTDIN  259 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~  259 (298)
                      |+++.|.||.+.|++.
T Consensus       171 i~v~~v~pg~~~t~~~  186 (276)
T PRK06482        171 IEFTIVEPGPARTNFG  186 (276)
T ss_pred             cEEEEEeCCccccCCc
Confidence            9999999999988864

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1e-28  Score=217.50  Aligned_cols=217  Identities=23%  Similarity=0.248  Sum_probs=169.1

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      |+++||||+||||++++++|+++|++|++++|++. .+...    .....  ..+.++++|+++.++++++++++.+.++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL----AEQYN--SNLTFHSLDLQDVHELETNFNEILSSIQ   75 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH----HhccC--CceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            68999999999999999999999999999999863 32222    22111  1378899999999999999998877665


Q ss_pred             C--cc--EEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC-CC
Q 022357           86 K--LD--ILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DS  160 (298)
Q Consensus        86 ~--id--~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~  160 (298)
                      .  ++  ++|+|||...+..                      ++.+.+.+.+.+.+++|+.+++.+++.++|.|++. ..
T Consensus        76 ~~~~~~~~~v~~ag~~~~~~----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  133 (251)
T PRK06924         76 EDNVSSIHLINNAGMVAPIK----------------------PIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVD  133 (251)
T ss_pred             cccCCceEEEEcceecccCc----------------------ccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCC
Confidence            3  22  7999999754321                      12235778899999999999999999999999764 35


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+..+                                          ++....|+++|+|++.|++.++.+
T Consensus       134 ~~iv~~sS~~~~~~------------------------------------------~~~~~~Y~~sKaa~~~~~~~la~e  171 (251)
T PRK06924        134 KRVINISSGAAKNP------------------------------------------YFGWSAYCSSKAGLDMFTQTVATE  171 (251)
T ss_pred             ceEEEecchhhcCC------------------------------------------CCCcHHHhHHHHHHHHHHHHHHHH
Confidence            79999999765433                                          266789999999999999999998


Q ss_pred             C----CCcEEEEeeCCeeecCCCCC---------------------CCCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          241 Y----PKFCVNCVCPGFVKTDINFH---------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       241 ~----~~i~vn~v~PG~v~t~~~~~---------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      +    .+|+||+|.||+++|++...                     ..+.++++.++..+.++... ...+|..+..++
T Consensus       172 ~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~G~~~~v~~  249 (251)
T PRK06924        172 QEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE-DFPNGEVIDIDE  249 (251)
T ss_pred             hhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc-cCCCCCEeehhh
Confidence            6    37999999999999986321                     12457788888888887653 455666665443

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.6e-28  Score=215.75  Aligned_cols=216  Identities=24%  Similarity=0.196  Sum_probs=175.5

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +|+++||||+||||++++++|+++|++|++++|+.++.+...+++..     ..+.++++|+++.+++..+++.+.++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGD-----ARFVPVACDLTDAASLAAALANAAAERG   76 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-----CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999999998877776666531     1388999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|++|||+|...+...                       .+.+.+.+.+.+++|+.+++.+++++++.+.+++.++||+
T Consensus        77 ~~d~vi~~ag~~~~~~~-----------------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~  133 (257)
T PRK07074         77 PVDVLVANAGAARAASL-----------------------HDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVN  133 (257)
T ss_pred             CCCEEEECCCCCCCCCh-----------------------hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEE
Confidence            99999999997644211                       1246788889999999999999999999998777789999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK  243 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~  243 (298)
                      +||..+...                                           .+...|+.+|+|++.++++++.++  .+
T Consensus       134 ~sS~~~~~~-------------------------------------------~~~~~y~~sK~a~~~~~~~~a~~~~~~g  170 (257)
T PRK07074        134 IGSVNGMAA-------------------------------------------LGHPAYSAAKAGLIHYTKLLAVEYGRFG  170 (257)
T ss_pred             EcchhhcCC-------------------------------------------CCCcccHHHHHHHHHHHHHHHHHHhHhC
Confidence            999654311                                           234679999999999999999998  48


Q ss_pred             cEEEEeeCCeeecCCCCC------------------CCCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          244 FCVNCVCPGFVKTDINFH------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~~------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      ++||.++||++.|++...                  ..+..+++.++..+.++.......+|..+..
T Consensus       171 i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~  237 (257)
T PRK07074        171 IRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPV  237 (257)
T ss_pred             eEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEe
Confidence            999999999999986421                  1246778888888877764444455555543

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.6e-28  Score=211.65  Aligned_cols=223  Identities=24%  Similarity=0.229  Sum_probs=180.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+++|++|||||+|+||++++++|+++|++|++++|++.+..+...++....     ...+.+|+++.++++++++.+
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~   76 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADA-----LRIGGIDLVDPQAARRAVDEV   76 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcC-----ceEEEeecCCHHHHHHHHHHH
Confidence            344788999999999999999999999999999999999877666666655432     567789999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|++|||+|......                       +...+.+.+.+.+++|+.+++.++++++|.|++++.
T Consensus        77 ~~~~~~~d~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  133 (239)
T PRK12828         77 NRQFGRLDALVNIAGAFVWGT-----------------------IADGDADTWDRMYGVNVKTTLNASKAALPALTASGG  133 (239)
T ss_pred             HHHhCCcCEEEECCcccCcCC-----------------------hhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCC
Confidence            999999999999999764321                       122467888899999999999999999999987777


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+..+.                                          +....|+++|++++.+++.++.+
T Consensus       134 ~~iv~~sS~~~~~~~------------------------------------------~~~~~y~~sk~a~~~~~~~~a~~  171 (239)
T PRK12828        134 GRIVNIGAGAALKAG------------------------------------------PGMGAYAAAKAGVARLTEALAAE  171 (239)
T ss_pred             CEEEEECchHhccCC------------------------------------------CCcchhHHHHHHHHHHHHHHHHH
Confidence            899999997765432                                          55778999999999999999998


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCC-------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHA-------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~-------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +  .+++++.|.||.+.|++....       .+.++++.++..+..+........|..+...
T Consensus       172 ~~~~~i~~~~i~pg~v~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~  233 (239)
T PRK12828        172 LLDRGITVNAVLPSIIDTPPNRADMPDADFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVD  233 (239)
T ss_pred             hhhcCeEEEEEecCcccCcchhhcCCchhhhcCCCHHHHHHHHHHHhCcccccccceEEEec
Confidence            7  589999999999999864321       2346788888877777654434455555443

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.96  E-value=1.8e-28  Score=215.89  Aligned_cols=189  Identities=32%  Similarity=0.421  Sum_probs=156.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh--hHHHHHHHHhcCCCCcceeEEEeccCc-HHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR--GLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADF   79 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~v~~~~~~   79 (298)
                      ++.+|+++||||++|||+++|++|+++|++|+++.|+...  .+...+... .... ..+.+.++|+++ .++++.+++.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~Dvs~~~~~v~~~~~~   79 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGG-GRAAAVAADVSDDEESVEALVAA   79 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCC-CcEEEEEecCCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999998888654  333333333 1111 238888999998 9999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+.+|++|++|||||.....                      .++.+.+.+.+++.+++|+.+++.+++.+.|+++++ 
T Consensus        80 ~~~~~g~id~lvnnAg~~~~~----------------------~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-  136 (251)
T COG1028          80 AEEEFGRIDILVNNAGIAGPD----------------------APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-  136 (251)
T ss_pred             HHHHcCCCCEEEECCCCCCCC----------------------CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-
Confidence            999999999999999987542                      122345779999999999999999999889999833 


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCC-CchhhhHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPH-SSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~al~~l~~~la  238 (298)
                        +||++||..+. +.                                          +. ...|++||+|+.+|++.++
T Consensus       137 --~Iv~isS~~~~-~~------------------------------------------~~~~~~Y~~sK~al~~~~~~l~  171 (251)
T COG1028         137 --RIVNISSVAGL-GG------------------------------------------PPGQAAYAASKAALIGLTKALA  171 (251)
T ss_pred             --eEEEECCchhc-CC------------------------------------------CCCcchHHHHHHHHHHHHHHHH
Confidence              99999998876 43                                          33 4899999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCC
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFH  261 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~  261 (298)
                      .|+  .||+||+|+||++.|++...
T Consensus       172 ~e~~~~gi~v~~v~PG~~~t~~~~~  196 (251)
T COG1028         172 LELAPRGIRVNAVAPGYIDTPMTAA  196 (251)
T ss_pred             HHHhhhCcEEEEEEeccCCCcchhh
Confidence            887  58999999999999998754

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4e-28  Score=215.22  Aligned_cols=206  Identities=31%  Similarity=0.415  Sum_probs=172.3

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++++|||||+||||++++++|+++|++|++++|+..+.+...++++..+.   .+.++.+|+++.++++.+++.+.++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~~   77 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGG---EALVVPTDVSDAEACERLIEAAVARFG   77 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999998777777777765433   388899999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhh-hHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQ-TYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      ++|++|||||......                       +.+. +.+.+.+.+++|+.+++.+++.+.|.|.++ .+++|
T Consensus        78 ~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv  133 (263)
T PRK06181         78 GIDILVNNAGITMWSR-----------------------FDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIV  133 (263)
T ss_pred             CCCEEEECCCcccccc-----------------------hhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEE
Confidence            9999999999764321                       1123 678889999999999999999999998754 48999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||..+..+.                                          +....|+++|+++++++++++.++  .
T Consensus       134 ~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~  171 (263)
T PRK06181        134 VVSSLAGLTGV------------------------------------------PTRSGYAASKHALHGFFDSLRIELADD  171 (263)
T ss_pred             EEecccccCCC------------------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhc
Confidence            99997765432                                          556889999999999999999988  5


Q ss_pred             CcEEEEeeCCeeecCCCCC----------------CCCCChhhhhhhhhhhhcc
Q 022357          243 KFCVNCVCPGFVKTDINFH----------------AGILSVEEGAESPVKLALL  280 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~----------------~~~~~~~~~a~~~~~~~~~  280 (298)
                      ++++++|.||++.|++...                ....++++.++..+..+..
T Consensus       172 ~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        172 GVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             CceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhhC
Confidence            8999999999999986431                1346788888887777753

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=6.3e-28  Score=212.05  Aligned_cols=228  Identities=24%  Similarity=0.225  Sum_probs=176.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++++++||||+||||+++++.|+++|++|++++|++.++....++++..+.   ++.++++|+++.++++++++.+.+
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~   78 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGT---EVRGYAANVTDEEDVEATFAQIAE   78 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999998887777777765433   378899999999999999999988


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC-CCC
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSP  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g  161 (298)
                      .++++|++|||||..........              .......+.+.+.+...+++|+.+++.+++.++|.|.+. ..+
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~  144 (253)
T PRK08217         79 DFGQLNGLINNAGILRDGLLVKA--------------KDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKG  144 (253)
T ss_pred             HcCCCCEEEECCCccCcCccccc--------------ccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCe
Confidence            88999999999997543211000              000001235778899999999999999999999999765 457


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +|+++||... .+.                                          +....|++||+|+++++++++.++
T Consensus       145 ~iv~~ss~~~-~~~------------------------------------------~~~~~Y~~sK~a~~~l~~~la~~~  181 (253)
T PRK08217        145 VIINISSIAR-AGN------------------------------------------MGQTNYSASKAGVAAMTVTWAKEL  181 (253)
T ss_pred             EEEEEccccc-cCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHH
Confidence            8999988542 221                                          456789999999999999999997


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                        .+|++++|+||+++|++....               ...++++.++.....+..  ...+|..+..
T Consensus       182 ~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~g~~~~~  247 (253)
T PRK08217        182 ARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLGEPEEIAHTVRFIIEN--DYVTGRVLEI  247 (253)
T ss_pred             HHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHcC--CCcCCcEEEe
Confidence              589999999999999876431               123667777776666642  2334544433

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.7e-28  Score=215.18  Aligned_cols=198  Identities=22%  Similarity=0.248  Sum_probs=161.0

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++++||||+||||++++++|+++|++|++++|+++++++....    ..   .+.++++|+++.++++++++++..   .
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~---~~~~~~~D~~~~~~~~~~~~~~~~---~   71 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----SA---NIFTLAFDVTDHPGTKAALSQLPF---I   71 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----cC---CCeEEEeeCCCHHHHHHHHHhccc---C
Confidence            6899999999999999999999999999999997665443322    22   278899999999999999887632   4


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|.+|||||......                       ....+.+.+++.+++|+.+++++++++.|+|++  +++||++
T Consensus        72 ~d~~i~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~i  126 (240)
T PRK06101         72 PELWIFNAGDCEYMD-----------------------DGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIV  126 (240)
T ss_pred             CCEEEEcCcccccCC-----------------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEE
Confidence            799999998643211                       012467888999999999999999999999953  4689999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CCc
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKF  244 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~i  244 (298)
                      ||..+..+.                                          +....|++||+++++|++.++.|+  .+|
T Consensus       127 sS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi  164 (240)
T PRK06101        127 GSIASELAL------------------------------------------PRAEAYGASKAAVAYFARTLQLDLRPKGI  164 (240)
T ss_pred             echhhccCC------------------------------------------CCCchhhHHHHHHHHHHHHHHHHHHhcCc
Confidence            997766443                                          567789999999999999999987  599


Q ss_pred             EEEEeeCCeeecCCCCCC-----CCCChhhhhhhhhhhhccC
Q 022357          245 CVNCVCPGFVKTDINFHA-----GILSVEEGAESPVKLALLP  281 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~~-----~~~~~~~~a~~~~~~~~~~  281 (298)
                      ++++|+||++.|++....     ...++++.++..+..+...
T Consensus       165 ~v~~v~pg~i~t~~~~~~~~~~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        165 EVVTVFPGFVATPLTDKNTFAMPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             eEEEEeCCcCCCCCcCCCCCCCCcccCHHHHHHHHHHHHhcC
Confidence            999999999999986432     2468899999988877653

>PRK09135 pteridine reductase; Provisional

Probab=99.96  E-value=1.4e-27  Score=209.38  Aligned_cols=223  Identities=23%  Similarity=0.191  Sum_probs=171.8

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |+...++++|||||+|+||++++++|+++|++|++++|+. +........++.....  .+.++.+|+++.+++.++++.
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~   78 (249)
T PRK09135          1 MMTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPG--SAAALQADLLDPDALPELVAA   78 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCC--ceEEEEcCCCCHHHHHHHHHH
Confidence            6677889999999999999999999999999999999864 3445555555543322  278899999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+.++++|+||||||.....+                       +.+.+.+.+++.+++|+.+++.+++++.|.+.++ 
T Consensus        79 ~~~~~~~~d~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-  134 (249)
T PRK09135         79 CVAAFGRLDALVNNASSFYPTP-----------------------LGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-  134 (249)
T ss_pred             HHHHcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-
Confidence            9999999999999999754321                       1123567788999999999999999999998654 


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .+++++++|..+..                                          +.++...|+.||++++.+++.++.
T Consensus       135 ~~~~~~~~~~~~~~------------------------------------------~~~~~~~Y~~sK~~~~~~~~~l~~  172 (249)
T PRK09135        135 RGAIVNITDIHAER------------------------------------------PLKGYPVYCAAKAALEMLTRSLAL  172 (249)
T ss_pred             CeEEEEEeChhhcC------------------------------------------CCCCchhHHHHHHHHHHHHHHHHH
Confidence            47888887744332                                          225578899999999999999999


Q ss_pred             hC-CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          240 RY-PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       240 e~-~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      ++ +++++++|.||++.|++....                ...++++.++....++... ....|..|..
T Consensus       173 ~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~-~~~~g~~~~i  241 (249)
T PRK09135        173 ELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLADA-SFITGQILAV  241 (249)
T ss_pred             HHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcc-ccccCcEEEE
Confidence            98 589999999999999875320                1235677777765555432 2234444443

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.96  E-value=1.2e-28  Score=203.77  Aligned_cols=163  Identities=35%  Similarity=0.498  Sum_probs=143.7

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC--chhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD--EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      |++|||||++|||++++++|+++|+ .|++++|+  .+...+...+++..+.   .+.++++|+++.++++++++.+.+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~   77 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGA---KITFIECDLSDPESIRALIEEVIKR   77 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTS---EEEEEESETTSHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccc---ccccccccccccccccccccccccc
Confidence            6899999999999999999999966 67888898  6677778888886553   3999999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      ++++|++|||||.....                       .+.+.+.+.+++.+++|+.+++.+.++++|    ++.|+|
T Consensus        78 ~~~ld~li~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~i  130 (167)
T PF00106_consen   78 FGPLDILINNAGIFSDG-----------------------SLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKI  130 (167)
T ss_dssp             HSSESEEEEECSCTTSB-----------------------SGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEE
T ss_pred             ccccccccccccccccc-----------------------ccccccchhhhhccccccceeeeeeehhee----ccccce
Confidence            99999999999998633                       222358899999999999999999999999    347999


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      |++||..+..+.                                          ++...|++||+|+.+|+++++.|+
T Consensus       131 v~~sS~~~~~~~------------------------------------------~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  131 VNISSIAGVRGS------------------------------------------PGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             EEEEEGGGTSSS------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecchhhccCC------------------------------------------CCChhHHHHHHHHHHHHHHHHHhc
Confidence            999998887654                                          788999999999999999999985

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.1e-28  Score=208.36  Aligned_cols=213  Identities=29%  Similarity=0.319  Sum_probs=172.0

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++++||||+|+||++++++|+++|++|++++|+.+..++    +...+     +.++.+|+++.++++++++++..  ++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~----~~~~~-----~~~~~~D~~~~~~v~~~~~~~~~--~~   70 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA----LQALG-----AEALALDVADPASVAGLAWKLDG--EA   70 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH----HHhcc-----ceEEEecCCCHHHHHHHHHHhcC--CC
Confidence            589999999999999999999999999999998765433    22221     56789999999999998776632  47


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|++|||+|.......                     .+.+.+.+++++.+++|+.+++.+++++.|.|.+. .|+++++
T Consensus        71 ~d~vi~~ag~~~~~~~---------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~i  128 (222)
T PRK06953         71 LDAAVYVAGVYGPRTE---------------------GVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVL  128 (222)
T ss_pred             CCEEEECCCcccCCCC---------------------CcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEE
Confidence            9999999997632210                     11124778899999999999999999999998653 5899999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      ||..+..+..                                       .......|+++|++++.+++.++.++++++|
T Consensus       129 sS~~~~~~~~---------------------------------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v  169 (222)
T PRK06953        129 SSRMGSIGDA---------------------------------------TGTTGWLYRASKAALNDALRAASLQARHATC  169 (222)
T ss_pred             cCcccccccc---------------------------------------cCCCccccHHhHHHHHHHHHHHhhhccCcEE
Confidence            9987654320                                       0011236999999999999999999999999


Q ss_pred             EEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          247 NCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       247 n~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      |.|+||+++|++....+.+.+++.++.+...+........+.||.
T Consensus       170 ~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (222)
T PRK06953        170 IALHPGWVRTDMGGAQAALDPAQSVAGMRRVIAQATRRDNGRFFQ  214 (222)
T ss_pred             EEECCCeeecCCCCCCCCCCHHHHHHHHHHHHHhcCcccCceEEe
Confidence            999999999999887777899999999999876556678888884

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.96  E-value=8.6e-28  Score=211.60  Aligned_cols=221  Identities=27%  Similarity=0.345  Sum_probs=180.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +|++|||||+|+||++++++|+++|++|++++|+.+..+...+++...+.   ++.++++|+++.++++.+++.+.+.++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGG---SVIYLVADVTKEDEIADMIAAAAAEFG   77 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---ceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999999999998777777666654432   388999999999999999999998889


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|++|||||.......                       .+.+.+.+++.+++|+.+++.+++.+++.|++.+.+++|+
T Consensus        78 ~~d~vi~~a~~~~~~~~-----------------------~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~  134 (255)
T TIGR01963        78 GLDILVNNAGIQHVAPI-----------------------EEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIIN  134 (255)
T ss_pred             CCCEEEECCCCCCCCCc-----------------------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEE
Confidence            99999999997643211                       1236677889999999999999999999998777789999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK  243 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~  243 (298)
                      +||..+..+.                                          +....|+.+|++++.+++.++.++  .+
T Consensus       135 ~ss~~~~~~~------------------------------------------~~~~~y~~sk~a~~~~~~~~~~~~~~~~  172 (255)
T TIGR01963       135 IASAHGLVAS------------------------------------------PFKSAYVAAKHGLIGLTKVLALEVAAHG  172 (255)
T ss_pred             EcchhhcCCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhhcC
Confidence            9997665432                                          556889999999999999999987  48


Q ss_pred             cEEEEeeCCeeecCCCCC---------------------------CCCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          244 FCVNCVCPGFVKTDINFH---------------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~~---------------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      ++++.++||.+.|++...                           ..+.++++.++..+..+..+....++..+..+.
T Consensus       173 i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~  250 (255)
T TIGR01963       173 ITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDG  250 (255)
T ss_pred             eEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcC
Confidence            999999999999875211                           125678888888888887654444555555443

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.96  E-value=1.3e-28  Score=244.91  Aligned_cols=187  Identities=25%  Similarity=0.237  Sum_probs=160.2

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+.+....+++...... ..+..+++|+++.++++++++++.+.
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~-~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGA-GRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCC-CcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999999988777776766643221 12778999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-CCc
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPR  162 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~  162 (298)
                      +|++|+||||||.....+                       +.+.+.+.|+..+++|+.+++.+++.+++.|++++ .|+
T Consensus       491 ~g~iDilV~nAG~~~~~~-----------------------~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~  547 (676)
T TIGR02632       491 YGGVDIVVNNAGIATSSP-----------------------FEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGN  547 (676)
T ss_pred             cCCCcEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence            999999999999764321                       12356788999999999999999999999998664 579


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|++||+|++.++++++.++ 
T Consensus       548 IV~iSS~~a~~~~------------------------------------------~~~~aY~aSKaA~~~l~r~lA~el~  585 (676)
T TIGR02632       548 IVFIASKNAVYAG------------------------------------------KNASAYSAAKAAEAHLARCLAAEGG  585 (676)
T ss_pred             EEEEeChhhcCCC------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999997766443                                          567899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeec
Q 022357          242 -PKFCVNCVCPGFVKT  256 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t  256 (298)
                       .+|+||+|+||.|.|
T Consensus       586 ~~gIrVn~V~Pg~V~~  601 (676)
T TIGR02632       586 TYGIRVNTVNPDAVLQ  601 (676)
T ss_pred             ccCeEEEEEECCceec
Confidence             489999999999975

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.5e-28  Score=210.49  Aligned_cols=208  Identities=23%  Similarity=0.247  Sum_probs=168.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+|+++||||+||||++++++|+++|++|++++|+..+         ...     ..++.+|+++.++++++++.+.+.+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~---------~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~   67 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID---------DFP-----GELFACDLADIEQTAATLAQINEIH   67 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc---------ccC-----ceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999999998753         000     2467899999999999999988876


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       ++|++|||||.....                       ++.+.+.+++.+.+++|+.+++.+++.++|.|++++.++||
T Consensus        68 -~~d~vi~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv  123 (234)
T PRK07577         68 -PVDAIVNNVGIALPQ-----------------------PLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIV  123 (234)
T ss_pred             -CCcEEEECCCCCCCC-----------------------ChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence             689999999986442                       12235778899999999999999999999999877778999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||.... +.                                          +....|++||+++++|+++++.++  .
T Consensus       124 ~~sS~~~~-~~------------------------------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~  160 (234)
T PRK07577        124 NICSRAIF-GA------------------------------------------LDRTSYSAAKSALVGCTRTWALELAEY  160 (234)
T ss_pred             EEcccccc-CC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99996422 11                                          446789999999999999999998  4


Q ss_pred             CcEEEEeeCCeeecCCCCCCC------------------CCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          243 KFCVNCVCPGFVKTDINFHAG------------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~~~------------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +|+|++|+||++.|++.....                  ..++++.+...+..+..+....+|.++..+
T Consensus       161 gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~  229 (234)
T PRK07577        161 GITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVD  229 (234)
T ss_pred             CcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEEec
Confidence            999999999999998753211                  126777787777777655555666666554

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.96  E-value=1.5e-27  Score=208.54  Aligned_cols=223  Identities=30%  Similarity=0.353  Sum_probs=180.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +++++++|||||+|+||++++++|+++|++|++++|++.+.+....+++..+..   +.++.+|+++.+++.++++.+..
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGE---ARVLVFDVSDEAAVRALIEAAVE   78 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCc---eEEEEccCCCHHHHHHHHHHHHH
Confidence            556789999999999999999999999999999999988777777776654433   88899999999999999999988


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|.+|||+|.......                       ...+.+.+.+.++.|+.+++.+++++.|.|.+.+.++
T Consensus        79 ~~~~id~vi~~ag~~~~~~~-----------------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~  135 (246)
T PRK05653         79 AFGALDILVNNAGITRDALL-----------------------PRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGR  135 (246)
T ss_pred             HhCCCCEEEECCCcCCCCCh-----------------------hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcE
Confidence            88999999999997644211                       1246778889999999999999999999998777789


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          .....|+.+|++++.++++++.++ 
T Consensus       136 ii~~ss~~~~~~~------------------------------------------~~~~~y~~sk~~~~~~~~~l~~~~~  173 (246)
T PRK05653        136 IVNISSVSGVTGN------------------------------------------PGQTNYSAAKAGVIGFTKALALELA  173 (246)
T ss_pred             EEEECcHHhccCC------------------------------------------CCCcHhHhHHHHHHHHHHHHHHHHh
Confidence            9999997654332                                          446789999999999999999987 


Q ss_pred             -CCcEEEEeeCCeeecCCCCC---------------CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFH---------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~---------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                       .+++++.|.||.+.+++...               ....++++.++.....+.......++..+...
T Consensus       174 ~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~  241 (246)
T PRK05653        174 SRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVIPVN  241 (246)
T ss_pred             hcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeC
Confidence             58999999999999987642               11345677777777766543444455555443

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.6e-28  Score=212.36  Aligned_cols=208  Identities=24%  Similarity=0.254  Sum_probs=162.4

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |+++++|+++||||+||||++++++|+++|++|++++|+.. ..+....+++..+.   .+.++++|+++.+++++++++
T Consensus         1 ~~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~   77 (248)
T PRK07806          1 MGDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGG---RASAVGADLTDEESVAALMDT   77 (248)
T ss_pred             CCCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCC---ceEEEEcCCCCHHHHHHHHHH
Confidence            77888999999999999999999999999999999999764 44555555654432   278899999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+.++.+|++|||||.....                             ...+.+.+++|+.+++++++++.|.|.+  
T Consensus        78 ~~~~~~~~d~vi~~ag~~~~~-----------------------------~~~~~~~~~vn~~~~~~l~~~~~~~~~~--  126 (248)
T PRK07806         78 AREEFGGLDALVLNASGGMES-----------------------------GMDEDYAMRLNRDAQRNLARAALPLMPA--  126 (248)
T ss_pred             HHHhCCCCcEEEECCCCCCCC-----------------------------CCCcceeeEeeeHHHHHHHHHHHhhccC--
Confidence            999899999999999864211                             0012356889999999999999999853  


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .++||++||..+....                                     .....+.+..|+.||++++.+++.++.
T Consensus       127 ~~~iv~isS~~~~~~~-------------------------------------~~~~~~~~~~Y~~sK~a~e~~~~~l~~  169 (248)
T PRK07806        127 GSRVVFVTSHQAHFIP-------------------------------------TVKTMPEYEPVARSKRAGEDALRALRP  169 (248)
T ss_pred             CceEEEEeCchhhcCc-------------------------------------cccCCccccHHHHHHHHHHHHHHHHHH
Confidence            4799999995442110                                     001113367899999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhc
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLAL  279 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~  279 (298)
                      ++  .+|+||+|+||++.|++....                 ...++++.++..+.++.
T Consensus       170 ~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  228 (248)
T PRK07806        170 ELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVT  228 (248)
T ss_pred             HhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhh
Confidence            98  589999999999998753210                 23467777777777766

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.96  E-value=1.3e-27  Score=209.43  Aligned_cols=219  Identities=31%  Similarity=0.309  Sum_probs=171.5

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++++||||+||||++++++|+++|++|+++ .|+.++..+...++...+..   +..+++|+++.++++++++.+.+.++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~D~~d~~~i~~~~~~~~~~~~   78 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGK---AFVLQADISDENQVVAMFTAIDQHDE   78 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCe---EEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999874 57766666666666654332   78899999999999999999998999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC---CCc
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---SPR  162 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g~  162 (298)
                      ++|++|||||......                      ...+.+.+.++..+++|+.+++.+++.+++.|.+..   .|+
T Consensus        79 ~id~vi~~ag~~~~~~----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~  136 (247)
T PRK09730         79 PLAALVNNAGILFTQC----------------------TVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGA  136 (247)
T ss_pred             CCCEEEECCCCCCCCC----------------------ccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcE
Confidence            9999999999753221                      112357788999999999999999999999987542   478


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      +|++||..+..+.                                         +.....|+++|++++.++++++.++ 
T Consensus       137 ~v~~sS~~~~~~~-----------------------------------------~~~~~~Y~~sK~~~~~~~~~l~~~~~  175 (247)
T PRK09730        137 IVNVSSAASRLGA-----------------------------------------PGEYVDYAASKGAIDTLTTGLSLEVA  175 (247)
T ss_pred             EEEECchhhccCC-----------------------------------------CCcccchHhHHHHHHHHHHHHHHHHH
Confidence            9999997765432                                         1123579999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                       .++++++|+||.+.|++....                ...++++.++..+..+........|.++.
T Consensus       176 ~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~  242 (247)
T PRK09730        176 AQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGSFID  242 (247)
T ss_pred             HhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCcEEe
Confidence             699999999999999864321                11266777777776665544445555544

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=3e-27  Score=206.78  Aligned_cols=225  Identities=28%  Similarity=0.310  Sum_probs=180.0

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |+.++.|++|||||+|+||++++++|+++|++|+++.|+..+ .....+.++..+.   .+.++.+|+++.++++++++.
T Consensus         1 ~~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~   77 (249)
T PRK12825          1 MGSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGR---RAQAVQADVTDKAALEAAVAA   77 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC---ceEEEECCcCCHHHHHHHHHH
Confidence            777888999999999999999999999999999887766543 3444444444332   388899999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+.++.+|.+|||||......                       +.+.+.+.+.+.+++|+.+++++++.+.+++++.+
T Consensus        78 ~~~~~~~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  134 (249)
T PRK12825         78 AVERFGRIDILVNNAGIFEDKP-----------------------LADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR  134 (249)
T ss_pred             HHHHcCCCCEEEECCccCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            9888899999999999654321                       12246778899999999999999999999998777


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .+++|++||..+..+.                                          +....|+.+|++++++++.++.
T Consensus       135 ~~~~i~~SS~~~~~~~------------------------------------------~~~~~y~~sK~~~~~~~~~~~~  172 (249)
T PRK12825        135 GGRIVNISSVAGLPGW------------------------------------------PGRSNYAAAKAGLVGLTKALAR  172 (249)
T ss_pred             CCEEEEECccccCCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHH
Confidence            7899999998765432                                          4567899999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      ++  .+++++.|.||.+.|++....               .+.++++.++.....+........|.+|...
T Consensus       173 ~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~  243 (249)
T PRK12825        173 ELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSDASDYITGQVIEVT  243 (249)
T ss_pred             HHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeC
Confidence            97  589999999999999875321               1346678888777777655444556665544

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.4e-27  Score=211.49  Aligned_cols=190  Identities=27%  Similarity=0.298  Sum_probs=158.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |.++++++++||||+|+||++++++|+++|++|++++|+++..++..+.....     ++.++.+|+++++++.++++++
T Consensus         6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~   80 (264)
T PRK12829          6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA-----KVTATVADVADPAQVERVFDTA   80 (264)
T ss_pred             hhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC-----ceEEEEccCCCHHHHHHHHHHH
Confidence            34577899999999999999999999999999999999977666555544322     3788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||......                      .....+.+.+.+.+++|+.+++.+++++++.|...+.
T Consensus        81 ~~~~~~~d~vi~~ag~~~~~~----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  138 (264)
T PRK12829         81 VERFGGLDVLVNNAGIAGPTG----------------------GIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGH  138 (264)
T ss_pred             HHHhCCCCEEEECCCCCCCCC----------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence            998899999999999763221                      1112467888999999999999999999998876555


Q ss_pred             -CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          161 -PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       161 -g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                       ++|+++||..+..+.                                          +....|+.+|++++.+++.++.
T Consensus       139 ~~~vv~~ss~~~~~~~------------------------------------------~~~~~y~~~K~a~~~~~~~l~~  176 (264)
T PRK12829        139 GGVIIALSSVAGRLGY------------------------------------------PGRTPYAASKWAVVGLVKSLAI  176 (264)
T ss_pred             CeEEEEecccccccCC------------------------------------------CCCchhHHHHHHHHHHHHHHHH
Confidence             678888887655332                                          4567899999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCC
Q 022357          240 RY--PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~  259 (298)
                      ++  .++++++|.||++.|++.
T Consensus       177 ~~~~~~i~~~~l~pg~v~~~~~  198 (264)
T PRK12829        177 ELGPLGIRVNAILPGIVRGPRM  198 (264)
T ss_pred             HHhhcCeEEEEEecCCcCChHH
Confidence            88  589999999999998764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=7.3e-28  Score=229.90  Aligned_cols=217  Identities=27%  Similarity=0.295  Sum_probs=168.8

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch--hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +.++++|||||++|||++++++|+++|++|++++|...  .+.+..+++   +     ..++++|+++.++++++++.+.
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---~-----~~~~~~Dv~~~~~~~~~~~~~~  279 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV---G-----GTALALDITAPDAPARIAEHLA  279 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---C-----CeEEEEeCCCHHHHHHHHHHHH
Confidence            46799999999999999999999999999999988532  222222221   1     3578899999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ++++++|+||||||+....                       .+.+.+.+.|+..+++|+.+++++++++.+.+..++.+
T Consensus       280 ~~~g~id~vi~~AG~~~~~-----------------------~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g  336 (450)
T PRK08261        280 ERHGGLDIVVHNAGITRDK-----------------------TLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGG  336 (450)
T ss_pred             HhCCCCCEEEECCCcCCCC-----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCC
Confidence            9999999999999976432                       12235788899999999999999999999965545668


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          ++...|+++|+++++|+++++.++
T Consensus       337 ~iv~~SS~~~~~g~------------------------------------------~~~~~Y~asKaal~~~~~~la~el  374 (450)
T PRK08261        337 RIVGVSSISGIAGN------------------------------------------RGQTNYAASKAGVIGLVQALAPLL  374 (450)
T ss_pred             EEEEECChhhcCCC------------------------------------------CCChHHHHHHHHHHHHHHHHHHHH
Confidence            99999998876543                                          567899999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCC---------------CChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGI---------------LSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~---------------~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                        .+|++|+|+||+++|++....+.               ..|++.++..++.+.......+|..+..+
T Consensus       375 ~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~  443 (450)
T PRK08261        375 AERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAWLASPASGGVTGNVVRVC  443 (450)
T ss_pred             hhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHHHhChhhcCCCCCEEEEC
Confidence              58999999999999987643221               24555555555555433333445444443

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-27  Score=209.81  Aligned_cols=214  Identities=25%  Similarity=0.222  Sum_probs=171.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+++++||||+|+||+++++.|+++|++|++++|+.++.++..+...        ..++.+|+++.++++++++.   
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~--------~~~~~~D~~~~~~v~~~~~~---   74 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETG--------CEPLRLDVGDDAAIRAALAA---   74 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--------CeEEEecCCCHHHHHHHHHH---
Confidence            3678999999999999999999999999999999999766554433321        55788999999988877664   


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-CC
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SP  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g  161 (298)
                       ++++|++|||||......                       ..+.+.+.+++.+++|+.+++.+++++++.++++. .+
T Consensus        75 -~~~~d~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  130 (245)
T PRK07060         75 -AGAFDGLVNCAGIASLES-----------------------ALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGG  130 (245)
T ss_pred             -hCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCc
Confidence             478999999999864321                       12246788899999999999999999999987543 48


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||++++.++++++.++
T Consensus       131 ~iv~~sS~~~~~~~------------------------------------------~~~~~y~~sK~a~~~~~~~~a~~~  168 (245)
T PRK07060        131 SIVNVSSQAALVGL------------------------------------------PDHLAYCASKAALDAITRVLCVEL  168 (245)
T ss_pred             EEEEEccHHHcCCC------------------------------------------CCCcHhHHHHHHHHHHHHHHHHHH
Confidence            99999997765432                                          456789999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCC-----------------CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 --PKFCVNCVCPGFVKTDINFH-----------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~-----------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                        .+|++++|+||++.|++...                 ..+.++++.++..+..+..+....+|.++...
T Consensus       169 ~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~  239 (245)
T PRK07060        169 GPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVD  239 (245)
T ss_pred             hhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCcEEeEC
Confidence              48999999999999987421                 12467888888888888766666667766554

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.96  E-value=3.9e-27  Score=206.11  Aligned_cols=223  Identities=31%  Similarity=0.343  Sum_probs=176.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++.+|+++||||+|+||++++++|+++|++|+++.|+.. ......++++..+.   .+.++.+|+++.+++.++++++.
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~   78 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGG---KALAVQGDVSDAESVERAVDEAK   78 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCC---ceEEEEcCCCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999988888765 34555555554332   38889999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +.++++|++|||||.......                       .+.+.+.+.+.+++|+.+++.+++.+++.+.+.+.+
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~-----------------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  135 (248)
T PRK05557         79 AEFGGVDILVNNAGITRDNLL-----------------------MRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSG  135 (248)
T ss_pred             HHcCCCCEEEECCCcCCCCCc-----------------------ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCe
Confidence            988999999999997643211                       124668888999999999999999999999877678


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      ++|++||..+..+.                                          +....|+++|++++.+++.++.++
T Consensus       136 ~~v~iss~~~~~~~------------------------------------------~~~~~y~~sk~a~~~~~~~~a~~~  173 (248)
T PRK05557        136 RIINISSVVGLMGN------------------------------------------PGQANYAASKAGVIGFTKSLAREL  173 (248)
T ss_pred             EEEEEcccccCcCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHh
Confidence            99999998665432                                          456789999999999999999987


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                        .+++++.|+||+++|++....               ...++++.++....+........++..+..+
T Consensus       174 ~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~  242 (248)
T PRK05557        174 ASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQTLHVN  242 (248)
T ss_pred             hhhCeEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccccEEEec
Confidence              589999999999998865331               1246677777766665543444455555544

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.3e-28  Score=206.04  Aligned_cols=180  Identities=19%  Similarity=0.170  Sum_probs=151.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +++||||++|||++++++|+++ ++|++++|+..                    .++||+++.++++++++.    ++++
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------------~~~~D~~~~~~~~~~~~~----~~~i   56 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------------DVQVDITDPASIRALFEK----VGKV   56 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------------ceEecCCChHHHHHHHHh----cCCC
Confidence            6999999999999999999999 99999998752                    358999999999888764    4789


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |++|||||.....                       ++.+.+.++|++.+++|+.+++++++.+.|.|++  .|+|+++|
T Consensus        57 d~lv~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~is  111 (199)
T PRK07578         57 DAVVSAAGKVHFA-----------------------PLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTS  111 (199)
T ss_pred             CEEEECCCCCCCC-----------------------chhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEc
Confidence            9999999975322                       2233577889999999999999999999999964  48999999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-CCcEE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCV  246 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-~~i~v  246 (298)
                      |..+..+.                                          +....|++||+|+++|+++++.|+ .+|+|
T Consensus       112 s~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~gi~v  149 (199)
T PRK07578        112 GILSDEPI------------------------------------------PGGASAATVNGALEGFVKAAALELPRGIRI  149 (199)
T ss_pred             ccccCCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHccCCeEE
Confidence            98775432                                          667899999999999999999998 58999


Q ss_pred             EEeeCCeeecCCCCC------CCCCChhhhhhhhhhhhc
Q 022357          247 NCVCPGFVKTDINFH------AGILSVEEGAESPVKLAL  279 (298)
Q Consensus       247 n~v~PG~v~t~~~~~------~~~~~~~~~a~~~~~~~~  279 (298)
                      |.|+||+++|++...      ....++++.++..+..+.
T Consensus       150 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  188 (199)
T PRK07578        150 NVVSPTVLTESLEKYGPFFPGFEPVPAARVALAYVRSVE  188 (199)
T ss_pred             EEEcCCcccCchhhhhhcCCCCCCCCHHHHHHHHHHHhc
Confidence            999999999986421      235788898888776665

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.96  E-value=9.2e-28  Score=210.94  Aligned_cols=209  Identities=22%  Similarity=0.263  Sum_probs=174.4

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHH-HHHHHHHHHHhc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLAS-VSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~-v~~~~~~~~~~~   84 (298)
                      |++++|||||.|||++.|++||++|.+|++++|++++++.+++++.+...-  .+.++.+|.++.+. -+++.+.+..  
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~v--ev~~i~~Dft~~~~~ye~i~~~l~~--  124 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKV--EVRIIAIDFTKGDEVYEKLLEKLAG--  124 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCc--EEEEEEEecCCCchhHHHHHHHhcC--
Confidence            589999999999999999999999999999999999999999999976553  38999999998876 3333333321  


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      ..|.+||||+|.....|.                     .+.+.+.+.+.+.+.+|..+...+++.++|.|.+++.|-||
T Consensus       125 ~~VgILVNNvG~~~~~P~---------------------~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~Iv  183 (312)
T KOG1014|consen  125 LDVGILVNNVGMSYDYPE---------------------SFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIV  183 (312)
T ss_pred             CceEEEEecccccCCCcH---------------------HHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEE
Confidence            267789999998863311                     22234556788999999999999999999999998899999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||.++..+.                                          |..+.|++||+.+..|+++|+.|+  .
T Consensus       184 nigS~ag~~p~------------------------------------------p~~s~ysasK~~v~~~S~~L~~Ey~~~  221 (312)
T KOG1014|consen  184 NIGSFAGLIPT------------------------------------------PLLSVYSASKAFVDFFSRCLQKEYESK  221 (312)
T ss_pred             EeccccccccC------------------------------------------hhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999988765                                          778999999999999999999999  5


Q ss_pred             CcEEEEeeCCeeecCCCCCC----CCCChhhhhhhhhhhhccC
Q 022357          243 KFCVNCVCPGFVKTDINFHA----GILSVEEGAESPVKLALLP  281 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~~----~~~~~~~~a~~~~~~~~~~  281 (298)
                      ||.|-+|.|++|-|.|....    ...+|+..++..+......
T Consensus       222 gI~Vq~v~p~~VaTkm~~~~~~sl~~ps~~tfaksal~tiG~~  264 (312)
T KOG1014|consen  222 GIFVQSVIPYLVATKMAKYRKPSLFVPSPETFAKSALNTIGNA  264 (312)
T ss_pred             CeEEEEeehhheeccccccCCCCCcCcCHHHHHHHHHhhcCCc
Confidence            99999999999999987543    2357788888877777643

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.1e-27  Score=207.26  Aligned_cols=180  Identities=24%  Similarity=0.256  Sum_probs=148.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH-HHHhc--
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF-IKTQF--   84 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~-~~~~~--   84 (298)
                      ++|||||+||||++++++|+++|++|++++|+..+.  .   ....+   .++.++++|+++.++++++++. +.+.+  
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAAG---ERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhccC---CeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            699999999999999999999999999999986531  1   11112   2388899999999999998776 55544  


Q ss_pred             -CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           85 -GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        85 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                       +++|++|||||.......                      +.+.+.+.+++.+++|+.+++.+++.+++.|.+++.++|
T Consensus        75 ~~~~~~~v~~ag~~~~~~~----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i  132 (243)
T PRK07023         75 GASRVLLINNAGTVEPIGP----------------------LATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRI  132 (243)
T ss_pred             CCCceEEEEcCcccCCCCc----------------------cccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEE
Confidence             479999999997643211                      122477889999999999999999999999987777899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-C
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-P  242 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-~  242 (298)
                      |++||..+..+.                                          ++...|+++|++++++++.++.+. .
T Consensus       133 v~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~  170 (243)
T PRK07023        133 LHISSGAARNAY------------------------------------------AGWSVYCATKAALDHHARAVALDANR  170 (243)
T ss_pred             EEEeChhhcCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHhcCCC
Confidence            999997665432                                          567889999999999999999985 4


Q ss_pred             CcEEEEeeCCeeecCCC
Q 022357          243 KFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~  259 (298)
                      +|+++.|+||+++|++.
T Consensus       171 ~i~v~~v~pg~~~t~~~  187 (243)
T PRK07023        171 ALRIVSLAPGVVDTGMQ  187 (243)
T ss_pred             CcEEEEecCCccccHHH
Confidence            89999999999999863

>PRK08264 short chain dehydrogenase; Validated

Probab=99.95  E-value=8e-27  Score=203.78  Aligned_cols=203  Identities=29%  Similarity=0.317  Sum_probs=166.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |+++.+++++||||+|+||+++|++|+++|+ +|++++|+.+++..       .+.   .+.++.+|+++.++++++++.
T Consensus         1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~---~~~~~~~D~~~~~~~~~~~~~   70 (238)
T PRK08264          1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGP---RVVPLQLDVTDPASVAAAAEA   70 (238)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCC---ceEEEEecCCCHHHHHHHHHh
Confidence            7778899999999999999999999999999 99999998765433       111   388999999999998877654


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                          ++++|++|||||......                      .+.+.+.+.+.+.+++|+.+++.+++++.|.++.++
T Consensus        71 ----~~~id~vi~~ag~~~~~~----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  124 (238)
T PRK08264         71 ----ASDVTILVNNAGIFRTGS----------------------LLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG  124 (238)
T ss_pred             ----cCCCCEEEECCCcCCCCC----------------------ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence                468999999999732211                      112357888999999999999999999999998777


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .+++|++||..+..+.                                          +....|+.+|++++++++.++.
T Consensus       125 ~~~~v~~sS~~~~~~~------------------------------------------~~~~~y~~sK~a~~~~~~~l~~  162 (238)
T PRK08264        125 GGAIVNVLSVLSWVNF------------------------------------------PNLGTYSASKAAAWSLTQALRA  162 (238)
T ss_pred             CCEEEEEcChhhccCC------------------------------------------CCchHhHHHHHHHHHHHHHHHH
Confidence            7899999997765432                                          5567899999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCC--CCCChhhhhhhhhhhhccC
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHA--GILSVEEGAESPVKLALLP  281 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~--~~~~~~~~a~~~~~~~~~~  281 (298)
                      ++  .+++++++.||.++|++....  ...++++.++..+..+...
T Consensus       163 ~~~~~~i~~~~v~pg~v~t~~~~~~~~~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        163 ELAPQGTRVLGVHPGPIDTDMAAGLDAPKASPADVARQILDALEAG  208 (238)
T ss_pred             HhhhcCeEEEEEeCCcccccccccCCcCCCCHHHHHHHHHHHHhCC
Confidence            98  489999999999999985432  3567788888877776643

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=2.2e-26  Score=200.92  Aligned_cols=219  Identities=19%  Similarity=0.189  Sum_probs=176.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++++++||||+||||.++++.|+++|++|++++|++++.....+++...+    .+.++++|+++.++++++++++..
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dl~~~~~~~~~~~~~~~   77 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG----NIHYVVGDVSSTESARNVIEKAAK   77 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CeEEEECCCCCHHHHHHHHHHHHH
Confidence            5778999999999999999999999999999999999877666555554422    278899999999999999999888


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|.+|+|+|......                       +  .+.+.+++.+++|+.+++.+++.++|.|++  .++
T Consensus        78 ~~~~id~ii~~ag~~~~~~-----------------------~--~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~  130 (238)
T PRK05786         78 VLNAIDGLVVTVGGYVEDT-----------------------V--EEFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSS  130 (238)
T ss_pred             HhCCCCEEEEcCCCcCCCc-----------------------h--HHHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCE
Confidence            8899999999998653211                       0  133788899999999999999999999853  489


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      +|++||..+..+.                                         .+....|+.||+++..+++.++.++ 
T Consensus       131 iv~~ss~~~~~~~-----------------------------------------~~~~~~Y~~sK~~~~~~~~~~~~~~~  169 (238)
T PRK05786        131 IVLVSSMSGIYKA-----------------------------------------SPDQLSYAVAKAGLAKAVEILASELL  169 (238)
T ss_pred             EEEEecchhcccC-----------------------------------------CCCchHHHHHHHHHHHHHHHHHHHHh
Confidence            9999997653211                                         1345679999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCC----------CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFH----------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~----------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                       ++|+++.|+||++.|++...          ....++++.++..+..+..+.....|.++..+
T Consensus       170 ~~gi~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~  232 (238)
T PRK05786        170 GRGIRVNGIAPTTISGDFEPERNWKKLRKLGDDMAPPEDFAKVIIWLLTDEADWVDGVVIPVD  232 (238)
T ss_pred             hcCeEEEEEecCccCCCCCchhhhhhhccccCCCCCHHHHHHHHHHHhcccccCccCCEEEEC
Confidence             58999999999999986421          12467888888888888765555666665543

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.9e-27  Score=206.34  Aligned_cols=180  Identities=26%  Similarity=0.324  Sum_probs=151.2

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +|++|||||+||||++++++|+++|++|++++|+..+.....+.....+..   +.++.+|+++.++++++++      +
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~------~   72 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLA---LRVEKLDLTDAIDRAQAAE------W   72 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---ceEEEeeCCCHHHHHHHhc------C
Confidence            578999999999999999999999999999999987766665555544332   7889999999998877653      3


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|+||||||.....+                       +.+.+.+.+++.+++|+.+++.+++.+++.+++++.++||+
T Consensus        73 ~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~  129 (257)
T PRK09291         73 DVDVLLNNAGIGEAGA-----------------------VVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVF  129 (257)
T ss_pred             CCCEEEECCCcCCCcC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEE
Confidence            7999999999764332                       22357788899999999999999999999998777789999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK  243 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~  243 (298)
                      +||..+..+.                                          ++...|++||++++.+++.++.++  .+
T Consensus       130 ~SS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~g  167 (257)
T PRK09291        130 TSSMAGLITG------------------------------------------PFTGAYCASKHALEAIAEAMHAELKPFG  167 (257)
T ss_pred             EcChhhccCC------------------------------------------CCcchhHHHHHHHHHHHHHHHHHHHhcC
Confidence            9997765432                                          556789999999999999999987  59


Q ss_pred             cEEEEeeCCeeecCCC
Q 022357          244 FCVNCVCPGFVKTDIN  259 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~  259 (298)
                      |++++|+||++.|++.
T Consensus       168 i~~~~v~pg~~~t~~~  183 (257)
T PRK09291        168 IQVATVNPGPYLTGFN  183 (257)
T ss_pred             cEEEEEecCcccccch
Confidence            9999999999999865

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=1.5e-28  Score=197.89  Aligned_cols=194  Identities=24%  Similarity=0.296  Sum_probs=166.3

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .++-+++||||.+|+|++.+.+|+++|+.|++.+-..++.++...++...      +.+.+.|++++.+++.++..+..+
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~------~vf~padvtsekdv~aala~ak~k   80 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGK------VVFTPADVTSEKDVRAALAKAKAK   80 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCc------eEEeccccCcHHHHHHHHHHHHhh
Confidence            35779999999999999999999999999999998888888887776532      899999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC----
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD----  159 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----  159 (298)
                      ||++|.+|||||+.......                 ++++-...+.|+++..+++|+.|+|++++...-.|-++.    
T Consensus        81 fgrld~~vncagia~a~kty-----------------n~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~  143 (260)
T KOG1199|consen   81 FGRLDALVNCAGIAYAFKTY-----------------NVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQN  143 (260)
T ss_pred             ccceeeeeeccceeeeeeee-----------------eecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCC
Confidence            99999999999986432111                 122223358899999999999999999999988886542    


Q ss_pred             --CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH
Q 022357          160 --SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       160 --~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l  237 (298)
                        .|.||++.|.++..+.                                          .++++|++||.|+.+|+--+
T Consensus       144 gqrgviintasvaafdgq------------------------------------------~gqaaysaskgaivgmtlpi  181 (260)
T KOG1199|consen  144 GQRGVIINTASVAAFDGQ------------------------------------------TGQAAYSASKGAIVGMTLPI  181 (260)
T ss_pred             CcceEEEeeceeeeecCc------------------------------------------cchhhhhcccCceEeeechh
Confidence              3799999999887665                                          66899999999999999999


Q ss_pred             HHhC--CCcEEEEeeCCeeecCCCCCC
Q 022357          238 AKRY--PKFCVNCVCPGFVKTDINFHA  262 (298)
Q Consensus       238 a~e~--~~i~vn~v~PG~v~t~~~~~~  262 (298)
                      |+++  .|||+|.|+||.++||+....
T Consensus       182 ardla~~gir~~tiapglf~tpllssl  208 (260)
T KOG1199|consen  182 ARDLAGDGIRFNTIAPGLFDTPLLSSL  208 (260)
T ss_pred             hhhcccCceEEEeecccccCChhhhhh
Confidence            9999  589999999999999987543

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.95  E-value=2.6e-26  Score=200.07  Aligned_cols=216  Identities=32%  Similarity=0.403  Sum_probs=172.9

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +||||++|+||++++++|+++|++|++++|+. +......+.++..+..   +.++++|+++.++++++++.+.+.++++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVK---ALGVVCDVSDREDVKAVVEEIEEELGPI   77 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCc---eEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999875 4455555566554432   8899999999999999999999999999


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+||||||......                       +.+.+.+.+.+.+++|+.+++.+++.+.+.+.+.+.++++++|
T Consensus        78 d~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~s  134 (239)
T TIGR01830        78 DILVNNAGITRDNL-----------------------LMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINIS  134 (239)
T ss_pred             CEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEC
Confidence            99999999764321                       1124667888999999999999999999998766668999999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CCcE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFC  245 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~i~  245 (298)
                      |..+..+.                                          +....|+++|++++.+++.++.++  .+++
T Consensus       135 S~~~~~g~------------------------------------------~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~  172 (239)
T TIGR01830       135 SVVGLMGN------------------------------------------AGQANYAASKAGVIGFTKSLAKELASRNIT  172 (239)
T ss_pred             CccccCCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeE
Confidence            98776543                                          556889999999999999999987  6999


Q ss_pred             EEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          246 VNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       246 vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      ++.+.||++.|++....               ...++++.++..+..+........+.++..
T Consensus       173 ~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~  234 (239)
T TIGR01830       173 VNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHV  234 (239)
T ss_pred             EEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEe
Confidence            99999999998764321               133677777777766654444456655554

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08324 short chain dehydrogenase; Validated

Probab=99.95  E-value=2.4e-26  Score=229.44  Aligned_cols=187  Identities=28%  Similarity=0.279  Sum_probs=162.4

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+.++...+++...    ..+.++++|+++.++++++++.+.+.
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~----~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP----DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc----CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999988777776666543    13889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC-Cc
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS-PR  162 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~  162 (298)
                      +|++|++|||||.....+                       +.+.+.+.|+..+++|+.+++.+++++.+.|++++. |+
T Consensus       496 ~g~iDvvI~~AG~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~  552 (681)
T PRK08324        496 FGGVDIVVSNAGIAISGP-----------------------IEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGS  552 (681)
T ss_pred             cCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcE
Confidence            999999999999865432                       223578899999999999999999999999987664 89


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|++||++++.+++.++.++ 
T Consensus       553 iV~vsS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~  590 (681)
T PRK08324        553 IVFIASKNAVNPG------------------------------------------PNFGAYGAAKAAELHLVRQLALELG  590 (681)
T ss_pred             EEEECCccccCCC------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999998776443                                          567899999999999999999998 


Q ss_pred             -CCcEEEEeeCCee--ecCCC
Q 022357          242 -PKFCVNCVCPGFV--KTDIN  259 (298)
Q Consensus       242 -~~i~vn~v~PG~v--~t~~~  259 (298)
                       .+|+||.|+||.|  .|++.
T Consensus       591 ~~gIrvn~v~Pg~v~~~t~~~  611 (681)
T PRK08324        591 PDGIRVNGVNPDAVVRGSGIW  611 (681)
T ss_pred             ccCeEEEEEeCceeecCCccc
Confidence             4899999999999  77653

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.9e-27  Score=205.49  Aligned_cols=173  Identities=23%  Similarity=0.302  Sum_probs=144.3

Q ss_pred             EEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCccE
Q 022357           10 VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDI   89 (298)
Q Consensus        10 lITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~id~   89 (298)
                      |||||++|||++++++|+++|++|++++|+.+++.....+++. +   ..+.++.+|+++.++++++++.    .+++|+
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~---~~~~~~~~Dl~~~~~~~~~~~~----~~~id~   72 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-G---APVRTAALDITDEAAVDAFFAE----AGPFDH   72 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-C---CceEEEEccCCCHHHHHHHHHh----cCCCCE
Confidence            6999999999999999999999999999998777666666542 2   2378899999999999888765    478999


Q ss_pred             EEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEccC
Q 022357           90 LANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSY  169 (298)
Q Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~  169 (298)
                      +|||+|.....                       ++.+.+.+.+++.+++|+.+++++++  .+.+.  +.|+||++||.
T Consensus        73 li~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~  125 (230)
T PRK07041         73 VVITAADTPGG-----------------------PVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGF  125 (230)
T ss_pred             EEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECch
Confidence            99999976432                       12235778899999999999999999  44553  45899999998


Q ss_pred             cccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEEEe
Q 022357          170 VSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCV  249 (298)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn~v  249 (298)
                      .+..+.                                          +....|++||+++++|+++++.++.+++||.|
T Consensus       126 ~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i  163 (230)
T PRK07041        126 AAVRPS------------------------------------------ASGVLQGAINAALEALARGLALELAPVRVNTV  163 (230)
T ss_pred             hhcCCC------------------------------------------CcchHHHHHHHHHHHHHHHHHHHhhCceEEEE
Confidence            765432                                          56788999999999999999999988999999


Q ss_pred             eCCeeecCCC
Q 022357          250 CPGFVKTDIN  259 (298)
Q Consensus       250 ~PG~v~t~~~  259 (298)
                      +||+++|++.
T Consensus       164 ~pg~~~t~~~  173 (230)
T PRK07041        164 SPGLVDTPLW  173 (230)
T ss_pred             eecccccHHH
Confidence            9999999864

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.7e-26  Score=203.44  Aligned_cols=194  Identities=20%  Similarity=0.184  Sum_probs=144.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++|+++||||++|||++++++|+++|++|++++|+......   .. ... .   ...+++|+++.+++++       .
T Consensus        12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~~-~---~~~~~~D~~~~~~~~~-------~   76 (245)
T PRK12367         12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DES-P---NEWIKWECGKEESLDK-------Q   76 (245)
T ss_pred             hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-ccC-C---CeEEEeeCCCHHHHHH-------h
Confidence            567999999999999999999999999999999998632111   11 111 1   3567899999987654       3


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC--CCC
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS--DSP  161 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~g  161 (298)
                      ++++|++|||||.....                          ..+.+++++.+++|+.++++++++++|.|+++  ..|
T Consensus        77 ~~~iDilVnnAG~~~~~--------------------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g  130 (245)
T PRK12367         77 LASLDVLILNHGINPGG--------------------------RQDPENINKALEINALSSWRLLELFEDIALNNNSQIP  130 (245)
T ss_pred             cCCCCEEEECCccCCcC--------------------------CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCC
Confidence            46899999999974321                          13678889999999999999999999999763  124


Q ss_pred             -cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHH---HHH
Q 022357          162 -RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT---RIL  237 (298)
Q Consensus       162 -~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~---~~l  237 (298)
                       .+++.||..+..+                                           +....|++||+|+..+.   +.+
T Consensus       131 ~~iiv~ss~a~~~~-------------------------------------------~~~~~Y~aSKaal~~~~~l~~~l  167 (245)
T PRK12367        131 KEIWVNTSEAEIQP-------------------------------------------ALSPSYEISKRLIGQLVSLKKNL  167 (245)
T ss_pred             eEEEEEecccccCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHH
Confidence             4545555443211                                           33567999999986544   444


Q ss_pred             HHhC--CCcEEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCC
Q 022357          238 AKRY--PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       238 a~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      +.++  .+++|+.++||+++|++.. ...++|++.++..+..+...+
T Consensus       168 ~~e~~~~~i~v~~~~pg~~~t~~~~-~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        168 LDKNERKKLIIRKLILGPFRSELNP-IGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             HHhhcccccEEEEecCCCcccccCc-cCCCCHHHHHHHHHHHHhcCC
Confidence            4444  5899999999999999753 235789999999888886544

>PRK08017 oxidoreductase; Provisional

Probab=99.94  E-value=2.3e-25  Score=196.50  Aligned_cols=202  Identities=25%  Similarity=0.296  Sum_probs=164.7

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc-C
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF-G   85 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~-g   85 (298)
                      |+++||||+||||++++++|+++|++|++++|+.++++..    ...+     +..+++|+++.+++..+++.+.... +
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~~~-----~~~~~~D~~~~~~~~~~~~~i~~~~~~   73 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NSLG-----FTGILLDLDDPESVERAADEVIALTDN   73 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----HhCC-----CeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            6899999999999999999999999999999997654432    2211     6788999999999999998887654 6


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|.+|||+|.....                       ++.+.+.+.+++.+++|+.|++.+++.+++.|++.+.++||+
T Consensus        74 ~~~~ii~~ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~  130 (256)
T PRK08017         74 RLYGLFNNAGFGVYG-----------------------PLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVM  130 (256)
T ss_pred             CCeEEEECCCCCCcc-----------------------chhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEE
Confidence            899999999965432                       122357788899999999999999999999998877789999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK  243 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~  243 (298)
                      +||..+..+.                                          +....|+++|++++.++++++.++  .+
T Consensus       131 ~ss~~~~~~~------------------------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~  168 (256)
T PRK08017        131 TSSVMGLIST------------------------------------------PGRGAYAASKYALEAWSDALRMELRHSG  168 (256)
T ss_pred             EcCcccccCC------------------------------------------CCccHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            9998766443                                          557889999999999999999887  58


Q ss_pred             cEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhccCC
Q 022357          244 FCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~  282 (298)
                      ++++.|+||++.|++....                 ...++++.++.....+...+
T Consensus       169 i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~  224 (256)
T PRK08017        169 IKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPK  224 (256)
T ss_pred             CEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCC
Confidence            9999999999999864321                 13577888887777776544

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=9e-26  Score=198.13  Aligned_cols=209  Identities=23%  Similarity=0.230  Sum_probs=181.4

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++.++|||||+|||+++|+++..+|++|.++.|+.+++.+++++++-..... .+.+..+|+++.+++...++++.+..+
T Consensus        33 ~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~-~v~~~S~d~~~Y~~v~~~~~~l~~~~~  111 (331)
T KOG1210|consen   33 RRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVE-DVSYKSVDVIDYDSVSKVIEELRDLEG  111 (331)
T ss_pred             cceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccc-eeeEeccccccHHHHHHHHhhhhhccC
Confidence            3689999999999999999999999999999999999999999988543321 277999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-CCcEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLV  164 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv  164 (298)
                      .+|.+|||||..-++..                       ++.+.+.++..+++|++|+++.+++.+|.|++.. .|+|+
T Consensus       112 ~~d~l~~cAG~~v~g~f-----------------------~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~  168 (331)
T KOG1210|consen  112 PIDNLFCCAGVAVPGLF-----------------------EDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRII  168 (331)
T ss_pred             CcceEEEecCccccccc-----------------------ccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEE
Confidence            99999999999876633                       3468999999999999999999999999998765 58999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||..+..+.                                          .++++|+++|+|+.+|+.+++.|.  .
T Consensus       169 ~vsS~~a~~~i------------------------------------------~GysaYs~sK~alrgLa~~l~qE~i~~  206 (331)
T KOG1210|consen  169 LVSSQLAMLGI------------------------------------------YGYSAYSPSKFALRGLAEALRQELIKY  206 (331)
T ss_pred             EehhhhhhcCc------------------------------------------ccccccccHHHHHHHHHHHHHHHHhhc
Confidence            99998887654                                          789999999999999999999999  4


Q ss_pred             CcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhcc
Q 022357          243 KFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALL  280 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~  280 (298)
                      +|+|..+.|+.++||.....               +...+++.+...+.-+..
T Consensus       207 ~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~~r  259 (331)
T KOG1210|consen  207 GVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKGMKR  259 (331)
T ss_pred             ceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhHHhh
Confidence            99999999999999976442               245777777776665543

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.93  E-value=1.2e-24  Score=203.50  Aligned_cols=194  Identities=21%  Similarity=0.216  Sum_probs=149.7

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++|+++||||+||||++++++|+++|++|++++|+++++....   .....   .+..+.+|+++.+++.+.+      
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~~~---~v~~v~~Dvsd~~~v~~~l------  243 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGEDL---PVKTLHWQVGQEAALAELL------  243 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhcCC---CeEEEEeeCCCHHHHHHHh------
Confidence            56899999999999999999999999999999999876543322   21111   2678899999998876543      


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC---
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS---  160 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~---  160 (298)
                       +++|++|||||.....                          +.+.+++++.+++|+.|++.++++++|.|++++.   
T Consensus       244 -~~IDiLInnAGi~~~~--------------------------~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~  296 (406)
T PRK07424        244 -EKVDILIINHGINVHG--------------------------ERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKAT  296 (406)
T ss_pred             -CCCCEEEECCCcCCCC--------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence             5899999999975321                          1467888999999999999999999999976542   


Q ss_pred             -CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          161 -PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       161 -g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                       +.+|++|+ ++..                                           ++..+.|++||+|+..|++ +++
T Consensus       297 ~~iiVn~Ss-a~~~-------------------------------------------~~~~~~Y~ASKaAl~~l~~-l~~  331 (406)
T PRK07424        297 KEVWVNTSE-AEVN-------------------------------------------PAFSPLYELSKRALGDLVT-LRR  331 (406)
T ss_pred             CeEEEEEcc-cccc-------------------------------------------CCCchHHHHHHHHHHHHHH-HHH
Confidence             23455543 2211                                           1345689999999999984 555


Q ss_pred             hCCCcEEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCC
Q 022357          240 RYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       240 e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      +..++.|..+.||+++|++.. ...++|++.|+..+..+...+
T Consensus       332 ~~~~~~I~~i~~gp~~t~~~~-~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        332 LDAPCVVRKLILGPFKSNLNP-IGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             hCCCCceEEEEeCCCcCCCCc-CCCCCHHHHHHHHHHHHHCCC
Confidence            556788889999999998863 345899999999999887544

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.93  E-value=9.3e-25  Score=183.59  Aligned_cols=229  Identities=22%  Similarity=0.244  Sum_probs=185.1

Q ss_pred             CCcCCCcEEEEeCC--CCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGS--NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         1 m~~~~~~~vlITGa--s~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      |..|.||++||+|-  ...|+-.+|+.|+++|+++..+++++ +++..++++.+.-+.   ..+++||+++.++++++++
T Consensus         1 ~g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s---~~v~~cDV~~d~~i~~~f~   76 (259)
T COG0623           1 MGLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS---DLVLPCDVTNDESIDALFA   76 (259)
T ss_pred             CCccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC---CeEEecCCCCHHHHHHHHH
Confidence            66789999999994  48999999999999999999999987 667777776654433   6789999999999999999


Q ss_pred             HHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                      .+.++||++|.|||+-+..+.....                   ..+.+.+.|.|...+++..++...+.+++.|+|.  
T Consensus        77 ~i~~~~g~lD~lVHsIaFa~k~el~-------------------G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~--  135 (259)
T COG0623          77 TIKKKWGKLDGLVHSIAFAPKEELK-------------------GDYLDTSREGFLIAMDISAYSFTALAKAARPLMN--  135 (259)
T ss_pred             HHHHhhCcccEEEEEeccCChHHhC-------------------CcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC--
Confidence            9999999999999999987643111                   1233468899999999999999999999999995  


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                      .+|+||.+|=..+....                                          |.+..-+.+|+||++-+|.||
T Consensus       136 ~ggSiltLtYlgs~r~v------------------------------------------PnYNvMGvAKAaLEasvRyLA  173 (259)
T COG0623         136 NGGSILTLTYLGSERVV------------------------------------------PNYNVMGVAKAALEASVRYLA  173 (259)
T ss_pred             CCCcEEEEEeccceeec------------------------------------------CCCchhHHHHHHHHHHHHHHH
Confidence            46899988875554332                                          778899999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCCC---CCChhhhhhhhhhhhccCCCCCcceEeccCccC
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHAG---ILSVEEGAESPVKLALLPDGGPTGRFFLRKEEA  296 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~~---~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a  296 (298)
                      .++  .|||||.|+-|+|+|--....+   .+-.......|+++..+.++......||.||.+
T Consensus       174 ~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLs  236 (259)
T COG0623         174 ADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLS  236 (259)
T ss_pred             HHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchh
Confidence            999  5999999999999995432221   122334455677777777777777777777654

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=1.1e-25  Score=188.99  Aligned_cols=193  Identities=24%  Similarity=0.237  Sum_probs=152.9

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |.-..++++|+||+|.|||..++..+.+.+-..+..+++....+  .+.++-..++  .......|++...-+.++++..
T Consensus         1 m~~~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~gd--~~v~~~g~~~e~~~l~al~e~~   76 (253)
T KOG1204|consen    1 MDLNMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYGD--DFVHVVGDITEEQLLGALREAP   76 (253)
T ss_pred             CCcccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEecC--CcceechHHHHHHHHHHHHhhh
Confidence            55567889999999999999999988887766554444433222  1222211112  2556677888888888899888


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-  159 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-  159 (298)
                      +++.++.|++|||||...+..-                    ......+.+.|++.++.|+++++.|.+.++|.+++++ 
T Consensus        77 r~k~gkr~iiI~NAG~lgdvsk--------------------~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~  136 (253)
T KOG1204|consen   77 RKKGGKRDIIIHNAGSLGDVSK--------------------GAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPV  136 (253)
T ss_pred             hhcCCceeEEEecCCCccchhh--------------------ccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCc
Confidence            8899999999999998754311                    1112358899999999999999999999999998875 


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .+.+||+||.+++.+.                                          .+..+|+++|+|.++|++.||.
T Consensus       137 ~~~vVnvSS~aav~p~------------------------------------------~~wa~yc~~KaAr~m~f~~lA~  174 (253)
T KOG1204|consen  137 NGNVVNVSSLAAVRPF------------------------------------------SSWAAYCSSKAARNMYFMVLAS  174 (253)
T ss_pred             cCeEEEecchhhhccc------------------------------------------cHHHHhhhhHHHHHHHHHHHhh
Confidence            6899999998887553                                          6679999999999999999999


Q ss_pred             hCC-CcEEEEeeCCeeecCCC
Q 022357          240 RYP-KFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       240 e~~-~i~vn~v~PG~v~t~~~  259 (298)
                      |.+ +++|.+++||+++|+|.
T Consensus       175 EEp~~v~vl~~aPGvvDT~mq  195 (253)
T KOG1204|consen  175 EEPFDVRVLNYAPGVVDTQMQ  195 (253)
T ss_pred             cCccceeEEEccCCcccchhH
Confidence            997 99999999999999985

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.9e-24  Score=183.54  Aligned_cols=199  Identities=26%  Similarity=0.317  Sum_probs=159.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .|+++||||+|+||++++++|+++ ++|++++|+.++.+.......       .+.++++|+++.++++++++.+    +
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~----~   70 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELP-------GATPFPVDLTDPEAIAAAVEQL----G   70 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhc-------cceEEecCCCCHHHHHHHHHhc----C
Confidence            478999999999999999999999 999999999766544433221       1778899999999988877643    5


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|+|||++|......                       ..+.+.+.+.+.+++|+.+++.+++.+++.++++ .+++|+
T Consensus        71 ~id~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~  126 (227)
T PRK08219         71 RLDVLVHNAGVADLGP-----------------------VAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVF  126 (227)
T ss_pred             CCCEEEECCCcCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEE
Confidence            7999999999754321                       1234778899999999999999999999998765 479999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCC-c
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK-F  244 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~-i  244 (298)
                      +||..+..+.                                          ++...|+.+|++++.+++.++.++.+ +
T Consensus       127 ~ss~~~~~~~------------------------------------------~~~~~y~~~K~a~~~~~~~~~~~~~~~i  164 (227)
T PRK08219        127 INSGAGLRAN------------------------------------------PGWGSYAASKFALRALADALREEEPGNV  164 (227)
T ss_pred             EcchHhcCcC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhcCCc
Confidence            9997765332                                          55678999999999999999998866 9


Q ss_pred             EEEEeeCCeeecCCCCC-----------CCCCChhhhhhhhhhhhccCC
Q 022357          245 CVNCVCPGFVKTDINFH-----------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~-----------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      +++.|.||.+.|++...           ..+.++++.++..+..+..+.
T Consensus       165 ~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~  213 (227)
T PRK08219        165 RVTSVHPGRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFAVDAPP  213 (227)
T ss_pred             eEEEEecCCccchHhhhhhhhhccccCCCCCCCHHHHHHHHHHHHcCCC
Confidence            99999999998875321           124688999988888876544

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.91  E-value=1.8e-24  Score=189.90  Aligned_cols=174  Identities=26%  Similarity=0.283  Sum_probs=124.9

Q ss_pred             HHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCccEEEEccccCCccc
Q 022357           22 TVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKF  101 (298)
Q Consensus        22 ~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~  101 (298)
                      +|++|+++|++|++++|+.++..     .         ..++++|+++.++++++++++.   +++|+||||||....  
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~---------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~--   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L---------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT--   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h---------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC--
Confidence            47899999999999999876531     0         3457899999999999988763   689999999997521  


Q ss_pred             ccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEccCcccccCCchHHH
Q 022357          102 DMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR  181 (298)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  181 (298)
                                                   +.+++.+++|+.+++.+++.++|.|+.  .|+||++||..+..........
T Consensus        62 -----------------------------~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~  110 (241)
T PRK12428         62 -----------------------------APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELH  110 (241)
T ss_pred             -----------------------------CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHH
Confidence                                         125678999999999999999999963  4899999998876321000000


Q ss_pred             hhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH-HhC--CCcEEEEeeCCeeecCC
Q 022357          182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA-KRY--PKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la-~e~--~~i~vn~v~PG~v~t~~  258 (298)
                      ..+.+.     .+.+... .+         ....+.++...|++||+|+++|++.++ .++  .||+||+|+||+|.|++
T Consensus       111 ~~~~~~-----~~~~~~~-~~---------~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~  175 (241)
T PRK12428        111 KALAAT-----ASFDEGA-AW---------LAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPI  175 (241)
T ss_pred             Hhhhcc-----chHHHHH-Hh---------hhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcc
Confidence            000000     0000000 00         000233567889999999999999999 887  48999999999999998


Q ss_pred             CC
Q 022357          259 NF  260 (298)
Q Consensus       259 ~~  260 (298)
                      ..
T Consensus       176 ~~  177 (241)
T PRK12428        176 LG  177 (241)
T ss_pred             cc
Confidence            54

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.91  E-value=4.2e-23  Score=225.31  Aligned_cols=182  Identities=21%  Similarity=0.185  Sum_probs=152.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCch------------------------------------------
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEK------------------------------------------   41 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~------------------------------------------   41 (298)
                      +++++|||||++|||+++|++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            4789999999999999999999998 699999999820                                          


Q ss_pred             -----hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccC
Q 022357           42 -----RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKG  116 (298)
Q Consensus        42 -----~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~  116 (298)
                           +....++.+...+.   .+.++.||++|.++++++++.+.+. ++||+||||||+....                
T Consensus      2076 ~~~~~ei~~~la~l~~~G~---~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~---------------- 2135 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGA---SAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADK---------------- 2135 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCC----------------
Confidence                 11112233333333   3889999999999999999999876 6899999999986433                


Q ss_pred             ccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHH
Q 022357          117 DAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIE  196 (298)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (298)
                             .+.+.+.++|++.+++|+.|.+++++++.+.+.    ++||++||+.+..+.                     
T Consensus      2136 -------~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~~----~~IV~~SSvag~~G~--------------------- 2183 (2582)
T TIGR02813      2136 -------HIQDKTLEEFNAVYGTKVDGLLSLLAALNAENI----KLLALFSSAAGFYGN--------------------- 2183 (2582)
T ss_pred             -------CcccCCHHHHHHHHHHHHHHHHHHHHHHHHhCC----CeEEEEechhhcCCC---------------------
Confidence                   223468899999999999999999999887542    579999999887654                     


Q ss_pred             HHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEEEeeCCeeecCCC
Q 022357          197 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn~v~PG~v~t~~~  259 (298)
                                           +++..|+++|+++++|++.++.++++++||+|+||+++|+|.
T Consensus      2184 ---------------------~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtgm~ 2225 (2582)
T TIGR02813      2184 ---------------------TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGGMV 2225 (2582)
T ss_pred             ---------------------CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCCcc
Confidence                                 678899999999999999999999899999999999999875

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.89  E-value=2.9e-22  Score=170.56  Aligned_cols=223  Identities=26%  Similarity=0.254  Sum_probs=168.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-----EEEEEecCchhhHHHHHHHHhcCC-CCcceeEEEeccCcHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-----TVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-----~Vii~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      .+|++||||+++|||.++|.+|++...     ++++++|+-++++++.+.+..... +...+.++++|++++.++.++.+
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            469999999999999999999998643     478899999999999999997654 34568999999999999999999


Q ss_pred             HHHHhcCCccEEEEccccCCccccccccc----ccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhh
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFA----DSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL  154 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  154 (298)
                      .+.++|.++|+++.|||+.......-.-+    .+.+..-.-.........-..+-+++.+.|++|++|+|.+++.+.|+
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence            99999999999999999876532100000    00000000000000000112466888899999999999999999999


Q ss_pred             hccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHH
Q 022357          155 LELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT  234 (298)
Q Consensus       155 ~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~  234 (298)
                      +-.++...+|-+||..+.              .++++.+|++-.                   .+...|+.||.+...+.
T Consensus       162 l~~~~~~~lvwtSS~~a~--------------kk~lsleD~q~~-------------------kg~~pY~sSKrl~DlLh  208 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMAR--------------KKNLSLEDFQHS-------------------KGKEPYSSSKRLTDLLH  208 (341)
T ss_pred             hhcCCCCeEEEEeecccc--------------cccCCHHHHhhh-------------------cCCCCcchhHHHHHHHH
Confidence            987776799999998874              345555554432                   34567999999999988


Q ss_pred             HHHHHhCC--CcEEEEeeCCeeecCCCC
Q 022357          235 RILAKRYP--KFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       235 ~~la~e~~--~i~vn~v~PG~v~t~~~~  260 (298)
                      -++-+.+.  |+.-.+++||...|.+..
T Consensus       209 ~A~~~~~~~~g~~qyvv~pg~~tt~~~~  236 (341)
T KOG1478|consen  209 VALNRNFKPLGINQYVVQPGIFTTNSFS  236 (341)
T ss_pred             HHHhccccccchhhhcccCceeecchhh
Confidence            88877773  788889999999998753

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.89  E-value=4.9e-22  Score=164.20  Aligned_cols=175  Identities=22%  Similarity=0.232  Sum_probs=140.1

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHH---HHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEA---VEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      |+++||||++|||++++++|+++|+ .|++++|++......   .++++..+.   .+.++.+|+++.++++++++.+..
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~   77 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGA---EVTVVACDVADRAALAAALAAIPA   77 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCC---eEEEEECCCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999997 688888876544332   244444332   378899999999999999999988


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|.+|||||......                       ....+.+.+++.+++|+.+++.+++++.+    .+.++
T Consensus        78 ~~~~id~li~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~  130 (180)
T smart00822       78 RLGPLRGVIHAAGVLDDGL-----------------------LANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDF  130 (180)
T ss_pred             HcCCeeEEEEccccCCccc-----------------------cccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcce
Confidence            8999999999999754321                       12346788889999999999999999844    34579


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      ++++||..+..+.                                          +....|+++|+++..+++.++.  .
T Consensus       131 ii~~ss~~~~~~~------------------------------------------~~~~~y~~sk~~~~~~~~~~~~--~  166 (180)
T smart00822      131 FVLFSSVAGVLGN------------------------------------------PGQANYAAANAFLDALAAHRRA--R  166 (180)
T ss_pred             EEEEccHHHhcCC------------------------------------------CCchhhHHHHHHHHHHHHHHHh--c
Confidence            9999997765442                                          4567899999999999987764  4


Q ss_pred             CcEEEEeeCCeee
Q 022357          243 KFCVNCVCPGFVK  255 (298)
Q Consensus       243 ~i~vn~v~PG~v~  255 (298)
                      ++++..+.||++.
T Consensus       167 ~~~~~~~~~g~~~  179 (180)
T smart00822      167 GLPATSINWGAWA  179 (180)
T ss_pred             CCceEEEeecccc
Confidence            7889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.89  E-value=2e-21  Score=173.90  Aligned_cols=235  Identities=23%  Similarity=0.193  Sum_probs=184.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+...+++|+||||||.||++++++|+++||+|..+.|++++ +...+.+.+..+...++..+..|+++++++.++++  
T Consensus         1 m~~~~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~-~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~--   77 (327)
T KOG1502|consen    1 MDQDEGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED-EKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID--   77 (327)
T ss_pred             CCCCCCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch-hhhHHHHHhcccCcccceEEeccccccchHHHHHh--
Confidence            555578999999999999999999999999999999999987 33323333333333459999999999999999987  


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                           .+|+|+|.|....+..                            .+.-.++++..+.|+.++++++...-   .-
T Consensus        78 -----gcdgVfH~Asp~~~~~----------------------------~~~e~~li~pav~Gt~nVL~ac~~~~---sV  121 (327)
T KOG1502|consen   78 -----GCDGVFHTASPVDFDL----------------------------EDPEKELIDPAVKGTKNVLEACKKTK---SV  121 (327)
T ss_pred             -----CCCEEEEeCccCCCCC----------------------------CCcHHhhhhHHHHHHHHHHHHHhccC---Cc
Confidence                 6899999998764421                            11123679999999999999997742   24


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      .|||++||.++...+-+.......-|.+.|++.+.....+.|                    |+.||.--+..+-.++.+
T Consensus       122 krvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~--------------------Y~~sK~lAEkaAw~fa~e  181 (327)
T KOG1502|consen  122 KRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLW--------------------YALSKTLAEKAAWEFAKE  181 (327)
T ss_pred             ceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHH--------------------HHHHHHHHHHHHHHHHHh
Confidence            699999999998766444555556667777777776666644                    999999999988899988


Q ss_pred             CCCcEEEEeeCCeeecCCCCCC------------------------CCCChhhhhhhhhhhhccCCCCCcceEeccCccC
Q 022357          241 YPKFCVNCVCPGFVKTDINFHA------------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRKEEA  296 (298)
Q Consensus       241 ~~~i~vn~v~PG~v~t~~~~~~------------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a  296 (298)
                      . ++.+.+|+||.|..|.....                        ......+.|...+.....|.  +.|+++..++..
T Consensus       182 ~-~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~--a~GRyic~~~~~  258 (327)
T KOG1502|consen  182 N-GLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKPS--AKGRYICVGEVV  258 (327)
T ss_pred             C-CccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCcc--cCceEEEecCcc
Confidence            5 99999999999999865431                        13578888999999888877  669999888765


Q ss_pred             C
Q 022357          297 P  297 (298)
Q Consensus       297 ~  297 (298)
                      .
T Consensus       259 ~  259 (327)
T KOG1502|consen  259 S  259 (327)
T ss_pred             c
Confidence            4

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.86  E-value=1.6e-20  Score=172.07  Aligned_cols=166  Identities=20%  Similarity=0.220  Sum_probs=128.4

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +++|++|||||+|+||++++++|+++|  ++|++++|+..........+.   .  ..+.++.+|++|.+++.++++   
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~---~--~~~~~v~~Dl~d~~~l~~~~~---   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP---A--PCLRFFIGDVRDKERLTRALR---   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC---C--CcEEEEEccCCCHHHHHHHHh---
Confidence            468999999999999999999999986  789999988654433322221   1  137889999999999888765   


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                          .+|+|||+||......                           ......+.+++|+.|++++++++.+.    +.+
T Consensus        74 ----~iD~Vih~Ag~~~~~~---------------------------~~~~~~~~~~~Nv~g~~~ll~aa~~~----~~~  118 (324)
T TIGR03589        74 ----GVDYVVHAAALKQVPA---------------------------AEYNPFECIRTNINGAQNVIDAAIDN----GVK  118 (324)
T ss_pred             ----cCCEEEECcccCCCch---------------------------hhcCHHHHHHHHHHHHHHHHHHHHHc----CCC
Confidence                5899999999753210                           01112357999999999999999862    346


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||....                                             .....|++||++.+.+++.++.+.
T Consensus       119 ~iV~~SS~~~~---------------------------------------------~p~~~Y~~sK~~~E~l~~~~~~~~  153 (324)
T TIGR03589       119 RVVALSTDKAA---------------------------------------------NPINLYGATKLASDKLFVAANNIS  153 (324)
T ss_pred             EEEEEeCCCCC---------------------------------------------CCCCHHHHHHHHHHHHHHHHHhhc
Confidence            99999995432                                             124679999999999999987654


Q ss_pred             --CCcEEEEeeCCeeecC
Q 022357          242 --PKFCVNCVCPGFVKTD  257 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~  257 (298)
                        .+++++++.||.|..+
T Consensus       154 ~~~gi~~~~lR~g~v~G~  171 (324)
T TIGR03589       154 GSKGTRFSVVRYGNVVGS  171 (324)
T ss_pred             cccCcEEEEEeecceeCC
Confidence              5899999999999875

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.84  E-value=9.4e-20  Score=168.47  Aligned_cols=186  Identities=20%  Similarity=0.086  Sum_probs=137.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++|++|||||+|+||++++++|+++|++|++++|+..........+.. ..   .+.++.+|+++.+++.++++..   
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~~~~Dl~~~~~~~~~~~~~---   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL-AK---KIEDHFGDIRDAAKLRKAIAEF---   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh-cC---CceEEEccCCCHHHHHHHHhhc---
Confidence            4679999999999999999999999999999999987654443333321 11   2677899999999988888754   


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        ++|+|||+|+.....                           .+.+++...+++|+.+++.+++++...   +..+++
T Consensus        75 --~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~i  122 (349)
T TIGR02622        75 --KPEIVFHLAAQPLVR---------------------------KSYADPLETFETNVMGTVNLLEAIRAI---GSVKAV  122 (349)
T ss_pred             --CCCEEEECCcccccc---------------------------cchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEE
Confidence              689999999954221                           133445577899999999999988542   224699


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||.........                              .....+..+......|+.||.+.+.+++.++.++  
T Consensus       123 v~~SS~~vyg~~~~------------------------------~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~  172 (349)
T TIGR02622       123 VNVTSDKCYRNDEW------------------------------VWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFG  172 (349)
T ss_pred             EEEechhhhCCCCC------------------------------CCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhc
Confidence            99999654321100                              0001112223446789999999999999998877  


Q ss_pred             ----CCcEEEEeeCCeeecCC
Q 022357          242 ----PKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       242 ----~~i~vn~v~PG~v~t~~  258 (298)
                          ++++++++.|+.+..|.
T Consensus       173 ~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       173 VANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             ccccCCCcEEEEccCcccCCC
Confidence                38999999999998763

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.83  E-value=2.9e-19  Score=163.38  Aligned_cols=193  Identities=22%  Similarity=0.207  Sum_probs=137.2

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |.+ .+|++|||||+|+||++++++|+++|++|++++|+..............+ ...++.++.+|+++.++++++++  
T Consensus         1 ~~~-~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~--   76 (325)
T PLN02989          1 MAD-GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDG-AKERLKLFKADLLDEGSFELAID--   76 (325)
T ss_pred             CCC-CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccC-CCCceEEEeCCCCCchHHHHHHc--
Confidence            444 47899999999999999999999999999999998765444322222111 11237889999999999888775  


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                           .+|+||||||.....                           .+.+.+.+.+++|+.+++++++++.+.+   +.
T Consensus        77 -----~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~  121 (325)
T PLN02989         77 -----GCETVFHTASPVAIT---------------------------VKTDPQVELINPAVNGTINVLRTCTKVS---SV  121 (325)
T ss_pred             -----CCCEEEEeCCCCCCC---------------------------CCCChHHHHHHHHHHHHHHHHHHHHHcC---Cc
Confidence                 589999999964211                           1223456789999999999999998754   24


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCC------CCCchhhhHHHHHHHHH
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC------PHSSAYKVSKAVINAYT  234 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~Y~~sK~al~~l~  234 (298)
                      ++||++||..+..+......   .+.                       .+.+..+.      .....|+.||.+.+.++
T Consensus       122 ~~iv~~SS~~~~~~~~~~~~---~~~-----------------------~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~  175 (325)
T PLN02989        122 KRVILTSSMAAVLAPETKLG---PND-----------------------VVDETFFTNPSFAEERKQWYVLSKTLAEDAA  175 (325)
T ss_pred             eEEEEecchhheecCCccCC---CCC-----------------------ccCcCCCCchhHhcccccchHHHHHHHHHHH
Confidence            69999999876543210000   000                       00011110      11357999999999999


Q ss_pred             HHHHHhCCCcEEEEeeCCeeecCCC
Q 022357          235 RILAKRYPKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       235 ~~la~e~~~i~vn~v~PG~v~t~~~  259 (298)
                      +.++.++ ++.++.+.|+.+..|..
T Consensus       176 ~~~~~~~-~~~~~ilR~~~vyGp~~  199 (325)
T PLN02989        176 WRFAKDN-EIDLIVLNPGLVTGPIL  199 (325)
T ss_pred             HHHHHHc-CCeEEEEcCCceeCCCC
Confidence            9988775 89999999999988753

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.83  E-value=6.7e-19  Score=169.07  Aligned_cols=196  Identities=18%  Similarity=0.173  Sum_probs=139.8

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhc-----CC-CCcceeEEEeccCcHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-----GV-DPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      ..+|+++||||+||||++++++|+++|++|++++|+.+++..+.+.+...     +. ...++.++.+|+++.+++++.+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            46799999999999999999999999999999999988877766655431     11 1123789999999998876543


Q ss_pred             HHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc
Q 022357           78 DFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL  157 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  157 (298)
                             +.+|+||||+|....                             ...++...+++|+.|+.++++++...   
T Consensus       158 -------ggiDiVVn~AG~~~~-----------------------------~v~d~~~~~~VN~~Gt~nLl~Aa~~a---  198 (576)
T PLN03209        158 -------GNASVVICCIGASEK-----------------------------EVFDVTGPYRIDYLATKNLVDAATVA---  198 (576)
T ss_pred             -------cCCCEEEEccccccc-----------------------------cccchhhHHHHHHHHHHHHHHHHHHh---
Confidence                   579999999986421                             11124466889999999999998652   


Q ss_pred             CCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH
Q 022357          158 SDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       158 ~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l  237 (298)
                       +.++||++||..+....                                        . +. ..|. +|.++..+.+.+
T Consensus       199 -gVgRIV~VSSiga~~~g----------------------------------------~-p~-~~~~-sk~~~~~~Kraa  234 (576)
T PLN03209        199 -KVNHFILVTSLGTNKVG----------------------------------------F-PA-AILN-LFWGVLCWKRKA  234 (576)
T ss_pred             -CCCEEEEEccchhcccC----------------------------------------c-cc-cchh-hHHHHHHHHHHH
Confidence             45799999997642110                                        0 11 1133 666666666666


Q ss_pred             HHhC--CCcEEEEeeCCeeecCCCCC---------------CCCCChhhhhhhhhhhhccCC
Q 022357          238 AKRY--PKFCVNCVCPGFVKTDINFH---------------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       238 a~e~--~~i~vn~v~PG~v~t~~~~~---------------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      ..++  .||++|.|+||++.|++...               ....++++.|+.+++++..+.
T Consensus       235 E~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~  296 (576)
T PLN03209        235 EEALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRR  296 (576)
T ss_pred             HHHHHHcCCCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHHHHHHHHHcCch
Confidence            6655  59999999999998875321               012466677777777666443

>PLN02583 cinnamoyl-CoA reductase

Probab=99.82  E-value=1.1e-18  Score=157.96  Aligned_cols=226  Identities=14%  Similarity=0.048  Sum_probs=150.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh--hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR--GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+|+++||||+|+||++++++|+++|++|+++.|+...  .......+....   .++.++.+|+++.+++.+++.    
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~---~~~~~~~~Dl~d~~~~~~~l~----   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEE---ERLKVFDVDPLDYHSILDALK----   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCC---CceEEEEecCCCHHHHHHHHc----
Confidence            56899999999999999999999999999999996432  222223322111   237888999999998876654    


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                         .+|.++|.++....                             ....+++.+++|+.|++++++++.+.+   ..++
T Consensus        78 ---~~d~v~~~~~~~~~-----------------------------~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r  122 (297)
T PLN02583         78 ---GCSGLFCCFDPPSD-----------------------------YPSYDEKMVDVEVRAAHNVLEACAQTD---TIEK  122 (297)
T ss_pred             ---CCCEEEEeCccCCc-----------------------------ccccHHHHHHHHHHHHHHHHHHHHhcC---CccE
Confidence               57888887653211                             011245789999999999999998764   2369


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      ||++||..+.....+.......-+...+...+  +..                  .....|+.||...+.++..++... 
T Consensus       123 iV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~--~~~------------------~~~~~Y~~sK~~aE~~~~~~~~~~-  181 (297)
T PLN02583        123 VVFTSSLTAVIWRDDNISTQKDVDERSWSDQN--FCR------------------KFKLWHALAKTLSEKTAWALAMDR-  181 (297)
T ss_pred             EEEecchHheecccccCCCCCCCCcccCCCHH--HHh------------------hcccHHHHHHHHHHHHHHHHHHHh-
Confidence            99999987653210000000000000000000  000                  112369999999999999887764 


Q ss_pred             CcEEEEeeCCeeecCCCCC----------------CCCCChhhhhhhhhhhhccCCCCCcceEeccCcc
Q 022357          243 KFCVNCVCPGFVKTDINFH----------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKEE  295 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~----------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~  295 (298)
                      ++++++|.|+.|.+|....                ......++.++..+..+..+.  ..++|++..+.
T Consensus       182 gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~--~~~r~~~~~~~  248 (297)
T PLN02583        182 GVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVS--SYGRYLCFNHI  248 (297)
T ss_pred             CCcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCcc--cCCcEEEecCC
Confidence            8999999999998875321                013466888888888777543  55688777664

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.82  E-value=1.7e-18  Score=158.66  Aligned_cols=211  Identities=14%  Similarity=0.033  Sum_probs=139.2

Q ss_pred             CCcEEEEeCCCCchhHH--HHHHHHHCCCEEEEEecCchhh------------HHHHHHHHhcCCCCcceeEEEeccCcH
Q 022357            5 TKKYAVVTGSNKGIGFE--TVRQLASKGITVVLTARDEKRG------------LEAVEKLKASGVDPELLLFHQLDISDL   70 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a--~a~~La~~G~~Vii~~r~~~~~------------~~~~~~~~~~~~~~~~~~~~~~Dls~~   70 (298)
                      .+|++||||+++|||.+  +|+.| ++|++|+++++..+..            +.+.+.+...+..   +..++||+++.
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~---a~~i~~DVss~  115 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLY---AKSINGDAFSD  115 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCc---eEEEEcCCCCH
Confidence            36899999999999999  89999 9999998888543221            1233334433322   67889999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEccccCCccccccc------cccccccccc---Cccccchhh--hhhhhHHHHHhhhhh
Q 022357           71 ASVSSLADFIKTQFGKLDILANNAGIASVKFDMDA------FADSGYQITK---GDAEVDWSK--VCYQTYELAVECLKT  139 (298)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~------~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~  139 (298)
                      ++++++++.+.+.+|+||+||||+|......+...      +-+.+...+.   +....+++.  +...+.+++..++++
T Consensus       116 E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~v  195 (398)
T PRK13656        116 EIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKV  195 (398)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHh
Confidence            99999999999999999999999998755432110      0001111110   001111111  111233444444443


Q ss_pred             hceeH-HHH--HHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCC
Q 022357          140 NYYGT-KQT--CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGW  216 (298)
Q Consensus       140 N~~~~-~~l--~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (298)
                      .-.-- ...  .....++|.  +++++|-.|.+......                                         
T Consensus       196 Mggedw~~Wi~al~~a~lla--~g~~~va~TY~G~~~t~-----------------------------------------  232 (398)
T PRK13656        196 MGGEDWELWIDALDEAGVLA--EGAKTVAYSYIGPELTH-----------------------------------------  232 (398)
T ss_pred             hccchHHHHHHHHHhccccc--CCcEEEEEecCCcceee-----------------------------------------
Confidence            33211 223  344467774  46899999986554321                                         


Q ss_pred             CCCC--chhhhHHHHHHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCCCC
Q 022357          217 CPHS--SAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAG  263 (298)
Q Consensus       217 ~~~~--~~Y~~sK~al~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~  263 (298)
                       |.+  ..-+.+|++|+.-+|.|+.++  .|+|+|++.+|++.|.-....+
T Consensus       233 -p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~Ass~Ip  282 (398)
T PRK13656        233 -PIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQASSAIP  282 (398)
T ss_pred             -cccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhcCC
Confidence             333  356899999999999999999  4999999999999998655443

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.81  E-value=1.5e-18  Score=146.08  Aligned_cols=173  Identities=24%  Similarity=0.291  Sum_probs=132.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc---hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE---KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ++|||||+||||..+++.|+++|. +|++++|+.   .......++++..+.   ++.+.+||++|+++++++++.+.+.
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~---~v~~~~~Dv~d~~~v~~~~~~~~~~   78 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGA---RVEYVQCDVTDPEAVAAALAQLRQR   78 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT----EEEEEE--TTSHHHHHHHHHTSHTT
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCC---ceeeeccCccCHHHHHHHHHHHHhc
Confidence            799999999999999999999976 799999993   234567777777655   3999999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      +++|+.|||+||.....                       .+.+.+.+.++..+...+.|.++|.+++.+    .+-..+
T Consensus        79 ~~~i~gVih~ag~~~~~-----------------------~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~  131 (181)
T PF08659_consen   79 FGPIDGVIHAAGVLADA-----------------------PIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFF  131 (181)
T ss_dssp             SS-EEEEEE-------B------------------------GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEE
T ss_pred             cCCcceeeeeeeeeccc-----------------------ccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeE
Confidence            99999999999986543                       223468899999999999999999998876    234688


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      |+.||+.+..+.                                          ++++.|+++.+.++.|++..+..  +
T Consensus       132 i~~SSis~~~G~------------------------------------------~gq~~YaaAN~~lda~a~~~~~~--g  167 (181)
T PF08659_consen  132 ILFSSISSLLGG------------------------------------------PGQSAYAAANAFLDALARQRRSR--G  167 (181)
T ss_dssp             EEEEEHHHHTT-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHT--T
T ss_pred             EEECChhHhccC------------------------------------------cchHhHHHHHHHHHHHHHHHHhC--C
Confidence            999999988765                                          78999999999999999876654  5


Q ss_pred             cEEEEeeCCee
Q 022357          244 FCVNCVCPGFV  254 (298)
Q Consensus       244 i~vn~v~PG~v  254 (298)
                      ..+.+|.-|+.
T Consensus       168 ~~~~sI~wg~W  178 (181)
T PF08659_consen  168 LPAVSINWGAW  178 (181)
T ss_dssp             SEEEEEEE-EB
T ss_pred             CCEEEEEcccc
Confidence            66777776654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK06720 hypothetical protein; Provisional

Probab=99.80  E-value=2.5e-18  Score=142.88  Aligned_cols=143  Identities=22%  Similarity=0.267  Sum_probs=113.6

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++|+++||||++|||+++++.|+++|++|++++|+.+.+....+++...+..   ..++++|+++.++++++++++.+.
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGE---ALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999987777776777644432   678899999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC----
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD----  159 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----  159 (298)
                      +|++|++|||||.........                      +.+.+. .+  .+|+.+++..++.+.+.|.+++    
T Consensus        91 ~G~iDilVnnAG~~~~~~~~~----------------------~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (169)
T PRK06720         91 FSRIDMLFQNAGLYKIDSIFS----------------------RQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVV  145 (169)
T ss_pred             cCCCCEEEECCCcCCCCCccc----------------------ccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEE
Confidence            999999999999765332111                      123233 22  6778888888998888876553    


Q ss_pred             ---CCcEEEEccCccccc
Q 022357          160 ---SPRLVNLSSYVSALK  174 (298)
Q Consensus       160 ---~g~iv~vsS~~~~~~  174 (298)
                         .||+..+||......
T Consensus       146 ~~~~~~~~~~~~~~~~~~  163 (169)
T PRK06720        146 LSDLPIFGIIGTKGQSFH  163 (169)
T ss_pred             eecCceeeEeccccccce
Confidence               489999999776543

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.79  E-value=2.1e-18  Score=158.78  Aligned_cols=187  Identities=20%  Similarity=0.128  Sum_probs=129.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhh-HHHHHHHHh-cCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG-LEAVEKLKA-SGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~-~~~~~~~~~-~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      +.++|++|||||+|+||++++++|+++|++|++++|+.... ....+.+.. .......+.++.+|+++.++++++++..
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            46789999999999999999999999999999999875431 111222211 0011123788999999999998888754


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-  159 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-  159 (298)
                           .+|+|||+|+.....                           ...+.....+++|+.|+.++++++.+...++. 
T Consensus        83 -----~~d~Vih~A~~~~~~---------------------------~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~  130 (340)
T PLN02653         83 -----KPDEVYNLAAQSHVA---------------------------VSFEMPDYTADVVATGALRLLEAVRLHGQETGR  130 (340)
T ss_pred             -----CCCEEEECCcccchh---------------------------hhhhChhHHHHHHHHHHHHHHHHHHHhcccccc
Confidence                 589999999975321                           12233456678999999999999998764321 


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      ..++|++||....... .                               ..+.+..+......|+.||.+.+.+++.++.
T Consensus       131 ~~~~v~~Ss~~vyg~~-~-------------------------------~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~  178 (340)
T PLN02653        131 QIKYYQAGSSEMYGST-P-------------------------------PPQSETTPFHPRSPYAVAKVAAHWYTVNYRE  178 (340)
T ss_pred             ceeEEEeccHHHhCCC-C-------------------------------CCCCCCCCCCCCChhHHHHHHHHHHHHHHHH
Confidence            1278888885432211 0                               0011222334467899999999999999988


Q ss_pred             hCC-----CcEEEEeeCCe
Q 022357          240 RYP-----KFCVNCVCPGF  253 (298)
Q Consensus       240 e~~-----~i~vn~v~PG~  253 (298)
                      ++.     .+.+|.+.||.
T Consensus       179 ~~~~~~~~~~~~~~~gp~~  197 (340)
T PLN02653        179 AYGLFACNGILFNHESPRR  197 (340)
T ss_pred             HcCCeEEEeeeccccCCCC
Confidence            862     34456666754

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.78  E-value=8.4e-18  Score=153.61  Aligned_cols=189  Identities=20%  Similarity=0.192  Sum_probs=131.6

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ..+++++||||+|+||++++++|+++|++|+++.|+..+...........+. ...+.++.+|+++.++++++++     
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-----   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGA-KERLKLFKADLLEESSFEQAIE-----   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCC-CCceEEEecCCCCcchHHHHHh-----
Confidence            4679999999999999999999999999999999987654332222221111 1237889999999998888776     


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        .+|+|||+|+.....                            ..+...+.+++|+.|+.++++++...   ...++|
T Consensus        77 --~~d~vih~A~~~~~~----------------------------~~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rv  123 (322)
T PLN02986         77 --GCDAVFHTASPVFFT----------------------------VKDPQTELIDPALKGTINVLNTCKET---PSVKRV  123 (322)
T ss_pred             --CCCEEEEeCCCcCCC----------------------------CCCchhhhhHHHHHHHHHHHHHHHhc---CCccEE
Confidence              589999999864221                            00112356899999999999987642   123699


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCC------CCCchhhhHHHHHHHHHHHH
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC------PHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~Y~~sK~al~~l~~~l  237 (298)
                      |++||..+.....++...   ..   .                    ..+..+.      .....|+.||.+.+.+++.+
T Consensus       124 V~~SS~~~~~~~~~~~~~---~~---~--------------------~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~  177 (322)
T PLN02986        124 ILTSSTAAVLFRQPPIEA---ND---V--------------------VDETFFSDPSLCRETKNWYPLSKILAENAAWEF  177 (322)
T ss_pred             EEecchhheecCCccCCC---CC---C--------------------cCcccCCChHHhhccccchHHHHHHHHHHHHHH
Confidence            999997654211000000   00   0                    0000000      12367999999999999998


Q ss_pred             HHhCCCcEEEEeeCCeeecCC
Q 022357          238 AKRYPKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       238 a~e~~~i~vn~v~PG~v~t~~  258 (298)
                      ..++ ++.++++.|+.|.+|.
T Consensus       178 ~~~~-~~~~~~lrp~~v~Gp~  197 (322)
T PLN02986        178 AKDN-GIDMVVLNPGFICGPL  197 (322)
T ss_pred             HHHh-CCeEEEEcccceeCCC
Confidence            8775 8999999999999875

>PLN02650 dihydroflavonol-4-reductase

Probab=99.78  E-value=9.9e-18  Score=155.03  Aligned_cols=194  Identities=20%  Similarity=0.112  Sum_probs=131.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+|++|||||+|+||++++++|+++|++|++++|+..............+ ....+.++.+|+++.+.++++++      
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~v~~Dl~d~~~~~~~~~------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPG-ATTRLTLWKADLAVEGSFDDAIR------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccC-CCCceEEEEecCCChhhHHHHHh------
Confidence            46799999999999999999999999999999998765444332222111 11237889999999988887765      


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       .+|.|||+|+.....                            ..+...+.+++|+.+++++++++.+..   ..++||
T Consensus        77 -~~d~ViH~A~~~~~~----------------------------~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v  124 (351)
T PLN02650         77 -GCTGVFHVATPMDFE----------------------------SKDPENEVIKPTVNGMLSIMKACAKAK---TVRRIV  124 (351)
T ss_pred             -CCCEEEEeCCCCCCC----------------------------CCCchhhhhhHHHHHHHHHHHHHHhcC---CceEEE
Confidence             589999999864211                            011124668999999999999997742   135999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCc
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF  244 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i  244 (298)
                      ++||...........+   ..+...+...+.                . ...+.....|+.||.+.+.+++.++.++ ++
T Consensus       125 ~~SS~~~~~~~~~~~~---~~~E~~~~~~~~----------------~-~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi  183 (351)
T PLN02650        125 FTSSAGTVNVEEHQKP---VYDEDCWSDLDF----------------C-RRKKMTGWMYFVSKTLAEKAAWKYAAEN-GL  183 (351)
T ss_pred             EecchhhcccCCCCCC---ccCcccCCchhh----------------h-hccccccchHHHHHHHHHHHHHHHHHHc-CC
Confidence            9999754322100000   000000000000                0 0011223579999999999999998875 89


Q ss_pred             EEEEeeCCeeecCC
Q 022357          245 CVNCVCPGFVKTDI  258 (298)
Q Consensus       245 ~vn~v~PG~v~t~~  258 (298)
                      +++.+.|+.+.+|.
T Consensus       184 ~~~ilRp~~v~Gp~  197 (351)
T PLN02650        184 DFISIIPTLVVGPF  197 (351)
T ss_pred             eEEEECCCceECCC
Confidence            99999999998874

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.77  E-value=1.6e-17  Score=153.66  Aligned_cols=186  Identities=18%  Similarity=0.113  Sum_probs=124.9

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEE-EEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVV-LTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vi-i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +++|||||+|+||++++++|+++|++++ +.+|.... ... ..+.... ....+.++.+|++|.++++++++..     
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   73 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVA-QSERFAFEKVDICDRAELARVFTEH-----   73 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcc-cCCceEEEECCCcChHHHHHHHhhc-----
Confidence            5799999999999999999999998755 44544321 111 1111110 0113778899999999988887642     


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhc---c--CCC
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE---L--SDS  160 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~---~--~~~  160 (298)
                      .+|+|||+||.....                           .+.+.+++.+++|+.+++++++++.+.|.   .  .+.
T Consensus        74 ~~D~Vih~A~~~~~~---------------------------~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~  126 (355)
T PRK10217         74 QPDCVMHLAAESHVD---------------------------RSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSA  126 (355)
T ss_pred             CCCEEEECCcccCcc---------------------------hhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCc
Confidence            699999999975321                           23355678899999999999999987542   1  123


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      .++|++||.........                             ....+.+..+....+.|+.||.+.+.+++.++.+
T Consensus       127 ~~~i~~SS~~vyg~~~~-----------------------------~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~  177 (355)
T PRK10217        127 FRFHHISTDEVYGDLHS-----------------------------TDDFFTETTPYAPSSPYSASKASSDHLVRAWLRT  177 (355)
T ss_pred             eEEEEecchhhcCCCCC-----------------------------CCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence            58999999643321000                             0001122223344678999999999999999887


Q ss_pred             CCCcEEEEeeCCeeecC
Q 022357          241 YPKFCVNCVCPGFVKTD  257 (298)
Q Consensus       241 ~~~i~vn~v~PG~v~t~  257 (298)
                      + ++.+..+.|+.+..|
T Consensus       178 ~-~~~~~i~r~~~v~Gp  193 (355)
T PRK10217        178 Y-GLPTLITNCSNNYGP  193 (355)
T ss_pred             h-CCCeEEEeeeeeeCC
Confidence            5 666666666655544

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.77  E-value=2.8e-17  Score=151.21  Aligned_cols=196  Identities=18%  Similarity=0.147  Sum_probs=130.3

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ..+++++||||+|+||++++++|+++|++|++++|+......... +..... ...+.++.+|+++.+++.++++     
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-----   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQE-LGDLKIFGADLTDEESFEAPIA-----   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCC-CCceEEEEcCCCChHHHHHHHh-----
Confidence            357899999999999999999999999999999988654332211 111111 0137889999999998887764     


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        ++|+|||+|+.....                            ..+.....+++|+.++.++++++.+.   .+.+++
T Consensus        80 --~~d~vih~A~~~~~~----------------------------~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~  126 (338)
T PLN00198         80 --GCDLVFHVATPVNFA----------------------------SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRV  126 (338)
T ss_pred             --cCCEEEEeCCCCccC----------------------------CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEE
Confidence              589999999853211                            11122356789999999999998763   134699


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      |++||................ +...+....               ...  ...+....|+.||.+.+.+++.++.++ +
T Consensus       127 v~~SS~~~~g~~~~~~~~~~~-~E~~~~~~~---------------~~~--~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~  187 (338)
T PLN00198        127 ILTSSAAAVSINKLSGTGLVM-NEKNWTDVE---------------FLT--SEKPPTWGYPASKTLAEKAAWKFAEEN-N  187 (338)
T ss_pred             EEeecceeeeccCCCCCCcee-ccccCCchh---------------hhh--hcCCccchhHHHHHHHHHHHHHHHHhc-C
Confidence            999997654321000000000 000000000               000  011335679999999999999998875 8


Q ss_pred             cEEEEeeCCeeecCC
Q 022357          244 FCVNCVCPGFVKTDI  258 (298)
Q Consensus       244 i~vn~v~PG~v~t~~  258 (298)
                      +.++.+.|+.|..|.
T Consensus       188 ~~~~~~R~~~vyGp~  202 (338)
T PLN00198        188 IDLITVIPTLMAGPS  202 (338)
T ss_pred             ceEEEEeCCceECCC
Confidence            899999999988874

>PLN02214 cinnamoyl-CoA reductase

Probab=99.76  E-value=2.3e-17  Score=152.28  Aligned_cols=220  Identities=20%  Similarity=0.142  Sum_probs=148.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH-HHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE-AVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+++++++||||+|+||++++++|+++|++|++++|+.+.... ....+...   ...+.++.+|+++.+++.++++   
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~---   80 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGG---KERLILCKADLQDYEALKAAID---   80 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCC---CCcEEEEecCcCChHHHHHHHh---
Confidence            4567899999999999999999999999999999998654322 12222211   1137888999999998888775   


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                          .+|+|||+|+...                                +.+.+.+++|+.++.++++++...    +.+
T Consensus        81 ----~~d~Vih~A~~~~--------------------------------~~~~~~~~~nv~gt~~ll~aa~~~----~v~  120 (342)
T PLN02214         81 ----GCDGVFHTASPVT--------------------------------DDPEQMVEPAVNGAKFVINAAAEA----KVK  120 (342)
T ss_pred             ----cCCEEEEecCCCC--------------------------------CCHHHHHHHHHHHHHHHHHHHHhc----CCC
Confidence                5899999998531                                112466899999999999998652    346


Q ss_pred             cEEEEccCcccccCCchHH--HhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          162 RLVNLSSYVSALKDLPEKA--RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      +||++||..+..+......  ...+++|.+..                       .+......|+.||.+.+.+++.++.
T Consensus       121 r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~-----------------------~~~~p~~~Y~~sK~~aE~~~~~~~~  177 (342)
T PLN02214        121 RVVITSSIGAVYMDPNRDPEAVVDESCWSDLD-----------------------FCKNTKNWYCYGKMVAEQAAWETAK  177 (342)
T ss_pred             EEEEeccceeeeccCCCCCCcccCcccCCChh-----------------------hccccccHHHHHHHHHHHHHHHHHH
Confidence            9999999765432110000  00000000000                       0011246799999999999999888


Q ss_pred             hCCCcEEEEeeCCeeecCCCCC------------------------CCCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          240 RYPKFCVNCVCPGFVKTDINFH------------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       240 e~~~i~vn~v~PG~v~t~~~~~------------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      ++ ++++..+.|+.|..|....                        ..+...++.++..+..+..+.  ..+++++.++
T Consensus       178 ~~-g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~--~~g~yn~~~~  253 (342)
T PLN02214        178 EK-GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPS--ASGRYLLAES  253 (342)
T ss_pred             Hc-CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCcc--cCCcEEEecC
Confidence            75 8999999999998874321                        012356777777776665432  3456666543

>PLN02240 UDP-glucose 4-epimerase

Probab=99.76  E-value=3.9e-17  Score=150.81  Aligned_cols=182  Identities=21%  Similarity=0.212  Sum_probs=124.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcC-CCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASG-VDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++++|+++||||+|+||++++++|+++|++|++++|...........+.... .....+.++.+|+++.++++.+++.. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            4567899999999999999999999999999999875433222222222111 01113778899999999988887642 


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                          .+|+|||+|+.....                           ...+.+.+.+++|+.++.++++++..    .+.+
T Consensus        81 ----~~d~vih~a~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~  125 (352)
T PLN02240         81 ----RFDAVIHFAGLKAVG---------------------------ESVAKPLLYYDNNLVGTINLLEVMAK----HGCK  125 (352)
T ss_pred             ----CCCEEEEccccCCcc---------------------------ccccCHHHHHHHHHHHHHHHHHHHHH----cCCC
Confidence                799999999975321                           12234456799999999999987643    3346


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      ++|++||.......                               ....+.+..+......|+.||.+.+.+++.++...
T Consensus       126 ~~v~~Ss~~vyg~~-------------------------------~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  174 (352)
T PLN02240        126 KLVFSSSATVYGQP-------------------------------EEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASD  174 (352)
T ss_pred             EEEEEccHHHhCCC-------------------------------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            89999995432110                               00112222333446789999999999999998765


Q ss_pred             CCcEEEEeeC
Q 022357          242 PKFCVNCVCP  251 (298)
Q Consensus       242 ~~i~vn~v~P  251 (298)
                      .++++..+.+
T Consensus       175 ~~~~~~~~R~  184 (352)
T PLN02240        175 PEWKIILLRY  184 (352)
T ss_pred             CCCCEEEEee
Confidence            4666555553

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.75  E-value=3e-17  Score=151.40  Aligned_cols=181  Identities=22%  Similarity=0.147  Sum_probs=122.8

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhh-HHHHHHHHhc--CCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG-LEAVEKLKAS--GVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~-~~~~~~~~~~--~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      |++|||||+|+||++++++|+++|++|++++|+.... ......+...  ......+.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            5899999999999999999999999999999886421 1111211110  000113788999999999988888754   


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhh-hccCCCCc
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL-LELSDSPR  162 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~-~~~~~~g~  162 (298)
                        ++|+|||+|+.....                           ...+.....+++|+.|+.++++++.+. ++  +..+
T Consensus        78 --~~d~ViH~Aa~~~~~---------------------------~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~--~~~~  126 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVK---------------------------VSFEIPEYTADVDGIGTLRLLEAVRTLGLI--KSVK  126 (343)
T ss_pred             --CCCEEEECCcccccc---------------------------hhhhChHHHHHHHHHHHHHHHHHHHHhCCC--cCee
Confidence              589999999975432                           111223456788999999999999773 21  1248


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      +|++||....... .                              ...+.+..+....+.|+.||.+.+.+++.++.++.
T Consensus       127 ~v~~SS~~vyg~~-~------------------------------~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  175 (343)
T TIGR01472       127 FYQASTSELYGKV-Q------------------------------EIPQNETTPFYPRSPYAAAKLYAHWITVNYREAYG  175 (343)
T ss_pred             EEEeccHHhhCCC-C------------------------------CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhC
Confidence            9999996543211 0                              00122233334567899999999999999988751


Q ss_pred             -----CcEEEEeeCC
Q 022357          243 -----KFCVNCVCPG  252 (298)
Q Consensus       243 -----~i~vn~v~PG  252 (298)
                           .+.+|...|+
T Consensus       176 ~~~~~~~~~~~~gp~  190 (343)
T TIGR01472       176 LFAVNGILFNHESPR  190 (343)
T ss_pred             CceEEEeecccCCCC
Confidence                 2334555565

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.74  E-value=1e-16  Score=148.37  Aligned_cols=200  Identities=20%  Similarity=0.152  Sum_probs=132.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++++|||||+|+||++++++|+++|++|++++|+..........+.. .   ..+.++.+|+++.+++.++++      
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~---~~~~~~~~Dl~~~~~~~~~~~------   78 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-G---DRLRLFRADLQEEGSFDEAVK------   78 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-C---CeEEEEECCCCCHHHHHHHHc------
Confidence            468999999999999999999999999999999987655544444332 1   238889999999998877764      


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHH--HhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELA--VECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                       .+|+|||+|+.........                      ..+++.+  ...+++|+.++.++++++.+..   ..++
T Consensus        79 -~~d~Vih~A~~~~~~~~~~----------------------~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~  132 (353)
T PLN02896         79 -GCDGVFHVAASMEFDVSSD----------------------HNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKR  132 (353)
T ss_pred             -CCCEEEECCccccCCcccc----------------------ccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccE
Confidence             5899999999764321000                      0112221  3456778899999999987642   2469


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      +|++||..........      .++.....++..... ++          .....+....|+.||.+.+.+++.++.++ 
T Consensus       133 ~v~~SS~~vyg~~~~~------~~~~~~~~E~~~~p~-~~----------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-  194 (353)
T PLN02896        133 VVFTSSISTLTAKDSN------GRWRAVVDETCQTPI-DH----------VWNTKASGWVYVLSKLLTEEAAFKYAKEN-  194 (353)
T ss_pred             EEEEechhhccccccC------CCCCCccCcccCCcH-HH----------hhccCCCCccHHHHHHHHHHHHHHHHHHc-
Confidence            9999997655321000      000000000000000 00          00011234579999999999999988875 


Q ss_pred             CcEEEEeeCCeeecCC
Q 022357          243 KFCVNCVCPGFVKTDI  258 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~  258 (298)
                      ++++.++.|+.|..|.
T Consensus       195 ~~~~~~lR~~~vyGp~  210 (353)
T PLN02896        195 GIDLVSVITTTVAGPF  210 (353)
T ss_pred             CCeEEEEcCCcccCCC
Confidence            8999999998887763

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.74  E-value=1.2e-16  Score=152.11  Aligned_cols=200  Identities=19%  Similarity=0.088  Sum_probs=131.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhh----------------HHHHHHHHhcCCCCcceeEEEec
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG----------------LEAVEKLKASGVDPELLLFHQLD   66 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~D   66 (298)
                      .++++++|||||+|+||++++++|+++|++|++++|.....                ...+..+.....  ..+.++.+|
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~v~~v~~D  121 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSG--KEIELYVGD  121 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhC--CcceEEECC
Confidence            35778999999999999999999999999999987532110                011111111111  127889999


Q ss_pred             cCcHHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHH
Q 022357           67 ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQ  146 (298)
Q Consensus        67 ls~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~  146 (298)
                      +++.+.++++++..     ++|+|||+|+.....                        ....+++.+...+++|+.|+++
T Consensus       122 l~d~~~v~~~l~~~-----~~D~ViHlAa~~~~~------------------------~~~~~~~~~~~~~~~Nv~gt~n  172 (442)
T PLN02572        122 ICDFEFLSEAFKSF-----EPDAVVHFGEQRSAP------------------------YSMIDRSRAVFTQHNNVIGTLN  172 (442)
T ss_pred             CCCHHHHHHHHHhC-----CCCEEEECCCcccCh------------------------hhhcChhhHHHHHHHHHHHHHH
Confidence            99999998888753     689999999764321                        0112344556778999999999


Q ss_pred             HHHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcC---CCCCCCchh
Q 022357          147 TCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANR---GWCPHSSAY  223 (298)
Q Consensus       147 l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Y  223 (298)
                      +++++...-   -..++|++||...+.....+.      +.             .+......  ..+.   .+......|
T Consensus       173 lleaa~~~g---v~~~~V~~SS~~vYG~~~~~~------~E-------------~~i~~~~~--~~e~~~~~~~~P~s~Y  228 (442)
T PLN02572        173 VLFAIKEFA---PDCHLVKLGTMGEYGTPNIDI------EE-------------GYITITHN--GRTDTLPYPKQASSFY  228 (442)
T ss_pred             HHHHHHHhC---CCccEEEEecceecCCCCCCC------cc-------------cccccccc--cccccccCCCCCCCcc
Confidence            999986631   124899999976442110000      00             00000000  0000   122335689


Q ss_pred             hhHHHHHHHHHHHHHHhCCCcEEEEeeCCeeecCC
Q 022357          224 KVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       224 ~~sK~al~~l~~~la~e~~~i~vn~v~PG~v~t~~  258 (298)
                      +.||.+.+.+++.++..+ ++.+..+.|+.+..|.
T Consensus       229 g~SK~a~E~l~~~~~~~~-gl~~v~lR~~~vyGp~  262 (442)
T PLN02572        229 HLSKVHDSHNIAFTCKAW-GIRATDLNQGVVYGVR  262 (442)
T ss_pred             hhHHHHHHHHHHHHHHhc-CCCEEEEecccccCCC
Confidence            999999999999888774 8888888888887764

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.73  E-value=1.2e-16  Score=145.67  Aligned_cols=219  Identities=20%  Similarity=0.180  Sum_probs=144.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+|++|||||+|+||++++++|+++|++|++++|+....... ..+........++.++.+|+++.+++.++++      
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSFDSVVD------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchHHHHHc------
Confidence            468999999999999999999999999999999986543222 2222111111237889999999988877765      


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       .+|+|||+|+.....                            ..+...+.+++|+.++.++++++....   +..++|
T Consensus        76 -~~d~Vih~A~~~~~~----------------------------~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v  123 (322)
T PLN02662         76 -GCEGVFHTASPFYHD----------------------------VTDPQAELIDPAVKGTLNVLRSCAKVP---SVKRVV  123 (322)
T ss_pred             -CCCEEEEeCCcccCC----------------------------CCChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEE
Confidence             579999999864311                            001113678999999999999986532   335999


Q ss_pred             EEccCcccc-cCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCC------CCCchhhhHHHHHHHHHHHH
Q 022357          165 NLSSYVSAL-KDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC------PHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       165 ~vsS~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~Y~~sK~al~~l~~~l  237 (298)
                      ++||..+.. +..+....    .+                       +.+..+.      .....|+.+|.+.+.+++.+
T Consensus       124 ~~SS~~~~~y~~~~~~~~----~~-----------------------~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~  176 (322)
T PLN02662        124 VTSSMAAVAYNGKPLTPD----VV-----------------------VDETWFSDPAFCEESKLWYVLSKTLAEEAAWKF  176 (322)
T ss_pred             EccCHHHhcCCCcCCCCC----Cc-----------------------CCcccCCChhHhhcccchHHHHHHHHHHHHHHH
Confidence            999975421 11000000    00                       0000000      11247999999999999988


Q ss_pred             HHhCCCcEEEEeeCCeeecCCCCC-----------------------CCCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          238 AKRYPKFCVNCVCPGFVKTDINFH-----------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       238 a~e~~~i~vn~v~PG~v~t~~~~~-----------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +.++ +++++.+.|+.+.+|....                       ..+...++.++..+..+..+.  ..+.+++.
T Consensus       177 ~~~~-~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~~~~~  251 (322)
T PLN02662        177 AKEN-GIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQAFEIPS--ASGRYCLV  251 (322)
T ss_pred             HHHc-CCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcCcC--cCCcEEEe
Confidence            7774 8999999999998875321                       013456777777766665432  23445444

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.71  E-value=4.7e-16  Score=142.82  Aligned_cols=178  Identities=20%  Similarity=0.147  Sum_probs=120.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +++||||+|+||++++++|+++|++|++++|...........+......  .+.++.+|+++.+++.++++.     .++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~~~~~~~~-----~~~   74 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIRNEALLTEILHD-----HAI   74 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCC--CceEEEccCCCHHHHHHHHhc-----CCC
Confidence            6999999999999999999999999999887543333322333322221  267789999999988887753     369


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+|||+|+......                           ..+...+.+++|+.++.++++++..    .+.+++|++|
T Consensus        75 d~vvh~a~~~~~~~---------------------------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~S  123 (338)
T PRK10675         75 DTVIHFAGLKAVGE---------------------------SVQKPLEYYDNNVNGTLRLISAMRA----ANVKNLIFSS  123 (338)
T ss_pred             CEEEECCccccccc---------------------------hhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEec
Confidence            99999998753210                           1122345688999999999887643    3456899999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCC-CCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC-PHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      |....... +                              ...+.+..+. .....|+.+|.+.+.+++.++.+..++++
T Consensus       124 s~~~yg~~-~------------------------------~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~  172 (338)
T PRK10675        124 SATVYGDQ-P------------------------------KIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI  172 (338)
T ss_pred             cHHhhCCC-C------------------------------CCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcE
Confidence            96432111 0                              0001111111 23578999999999999999877666666


Q ss_pred             EEeeCCee
Q 022357          247 NCVCPGFV  254 (298)
Q Consensus       247 n~v~PG~v  254 (298)
                      ..+.|+.+
T Consensus       173 ~ilR~~~v  180 (338)
T PRK10675        173 ALLRYFNP  180 (338)
T ss_pred             EEEEeeee
Confidence            66654333

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.71  E-value=5.5e-16  Score=143.37  Aligned_cols=185  Identities=17%  Similarity=0.115  Sum_probs=128.8

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcC--CCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASG--VDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +++++++||||+|.||++++++|+++|++|++++|...........+....  ....++.++.+|+++.+++..+++   
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~---   89 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK---   89 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh---
Confidence            356899999999999999999999999999999986543222222222110  011237789999999888777765   


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                          .+|+|||.|+.....                           ...++..+.+++|+.|+.++++++..    .+..
T Consensus        90 ----~~d~ViHlAa~~~~~---------------------------~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~  134 (348)
T PRK15181         90 ----NVDYVLHQAALGSVP---------------------------RSLKDPIATNSANIDGFLNMLTAARD----AHVS  134 (348)
T ss_pred             ----CCCEEEECccccCch---------------------------hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCC
Confidence                589999999975422                           11223345789999999999998854    3346


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      ++|++||....... +.                              ....+..+......|+.||.+.+.+++.++..+
T Consensus       135 ~~v~~SS~~vyg~~-~~------------------------------~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~  183 (348)
T PRK15181        135 SFTYAASSSTYGDH-PD------------------------------LPKIEERIGRPLSPYAVTKYVNELYADVFARSY  183 (348)
T ss_pred             eEEEeechHhhCCC-CC------------------------------CCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHh
Confidence            99999986433211 00                              001111122335689999999999998887764


Q ss_pred             CCcEEEEeeCCeeecCC
Q 022357          242 PKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~  258 (298)
                       ++++..+.|+-+..|.
T Consensus       184 -~~~~~~lR~~~vyGp~  199 (348)
T PRK15181        184 -EFNAIGLRYFNVFGRR  199 (348)
T ss_pred             -CCCEEEEEecceeCcC
Confidence             8888888888887763

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.71  E-value=4.6e-16  Score=140.91  Aligned_cols=181  Identities=20%  Similarity=0.120  Sum_probs=126.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchh-hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKR-GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +++||||||+||++++++|+++|  ++|++.+|.... ..+..+.+...    ..+.++.+|+++.+++.++++..    
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~----   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDN----PRYRFVKGDIGDRELVSRLFTEH----   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccC----CCcEEEEcCCcCHHHHHHHHhhc----
Confidence            48999999999999999999987  789888764321 11122222111    13778899999999998887643    


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       ++|+|||+|+.....                           ...+.+...+++|+.++..+++++...+.   ..++|
T Consensus        73 -~~d~vi~~a~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i  121 (317)
T TIGR01181        73 -QPDAVVHFAAESHVD---------------------------RSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFH  121 (317)
T ss_pred             -CCCEEEEcccccCch---------------------------hhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEE
Confidence             589999999875321                           23345567799999999999998876542   34899


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCc
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF  244 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i  244 (298)
                      ++||.........                              .+...+..+......|+.+|.+.+.+++.++.++ ++
T Consensus       122 ~~Ss~~v~g~~~~------------------------------~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~  170 (317)
T TIGR01181       122 HISTDEVYGDLEK------------------------------GDAFTETTPLAPSSPYSASKAASDHLVRAYHRTY-GL  170 (317)
T ss_pred             EeeccceeCCCCC------------------------------CCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHh-CC
Confidence            9999553321100                              0001112222345689999999999999988775 78


Q ss_pred             EEEEeeCCeeecCC
Q 022357          245 CVNCVCPGFVKTDI  258 (298)
Q Consensus       245 ~vn~v~PG~v~t~~  258 (298)
                      ++..+.|+.+..+.
T Consensus       171 ~~~i~R~~~i~G~~  184 (317)
T TIGR01181       171 PALITRCSNNYGPY  184 (317)
T ss_pred             CeEEEEeccccCCC
Confidence            88888888777653

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.68  E-value=1.3e-15  Score=140.73  Aligned_cols=192  Identities=19%  Similarity=0.128  Sum_probs=121.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~-Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++|||||+|+||++++++|+++|+. |++.++... ........+.. .   ..+.++.+|+++.++++++++..     
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSD-S---ERYVFEHADICDRAELDRIFAQH-----   72 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhccc-C---CceEEEEecCCCHHHHHHHHHhc-----
Confidence            6999999999999999999999986 444554321 11111111111 1   12778899999999988888642     


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC-----CC
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-----DS  160 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~  160 (298)
                      .+|+|||+||.....                           ......++.+++|+.|+.++++++.+.|...     +.
T Consensus        73 ~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~  125 (352)
T PRK10084         73 QPDAVMHLAAESHVD---------------------------RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNA  125 (352)
T ss_pred             CCCEEEECCcccCCc---------------------------chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccc
Confidence            699999999865321                           0112235679999999999999998876432     22


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      .++|++||.........+..   ..+...                  ...+.+..+......|+.||.+.+.+++.++.+
T Consensus       126 ~~~i~~SS~~vyg~~~~~~~---~~~~~~------------------~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~  184 (352)
T PRK10084        126 FRFHHISTDEVYGDLPHPDE---VENSEE------------------LPLFTETTAYAPSSPYSASKASSDHLVRAWLRT  184 (352)
T ss_pred             eeEEEecchhhcCCCCcccc---cccccc------------------CCCccccCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence            48999999654321100000   000000                  000112223344578999999999999999887


Q ss_pred             CCCcEEEEeeCCeeecC
Q 022357          241 YPKFCVNCVCPGFVKTD  257 (298)
Q Consensus       241 ~~~i~vn~v~PG~v~t~  257 (298)
                      + ++.+..+.|+.|..|
T Consensus       185 ~-g~~~vilr~~~v~Gp  200 (352)
T PRK10084        185 Y-GLPTIVTNCSNNYGP  200 (352)
T ss_pred             h-CCCEEEEeccceeCC
Confidence            5 555555666555543

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.68  E-value=3.4e-15  Score=131.76  Aligned_cols=193  Identities=21%  Similarity=0.187  Sum_probs=124.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH-HHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~   82 (298)
                      ..+++++||||+|+||++++++|+++|++|+++.|+.++......    ..   ..+.++++|+++. +++.+.   +. 
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~---~~~~~~~~Dl~d~~~~l~~~---~~-   83 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QD---PSLQIVRADVTEGSDKLVEA---IG-   83 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cC---CceEEEEeeCCCCHHHHHHH---hh-
Confidence            457899999999999999999999999999999999765433211    11   1378899999983 332222   20 


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                        ..+|+||+|+|.......                               ...+++|+.++.++++++.    +.+.++
T Consensus        84 --~~~d~vi~~~g~~~~~~~-------------------------------~~~~~~n~~~~~~ll~a~~----~~~~~~  126 (251)
T PLN00141         84 --DDSDAVICATGFRRSFDP-------------------------------FAPWKVDNFGTVNLVEACR----KAGVTR  126 (251)
T ss_pred             --cCCCEEEECCCCCcCCCC-------------------------------CCceeeehHHHHHHHHHHH----HcCCCE
Confidence              269999999986421100                               0124678888888888874    345579


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh-C
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR-Y  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e-~  241 (298)
                      ||++||.......                                       ...+....|...|.....+...+..| +
T Consensus       127 iV~iSS~~v~g~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~k~~~e~~  167 (251)
T PLN00141        127 FILVSSILVNGAA---------------------------------------MGQILNPAYIFLNLFGLTLVAKLQAEKY  167 (251)
T ss_pred             EEEEccccccCCC---------------------------------------cccccCcchhHHHHHHHHHHHHHHHHHH
Confidence            9999997532111                                       00011233544444332222222222 1


Q ss_pred             ---CCcEEEEeeCCeeecCCCCC-----------CCCCChhhhhhhhhhhhccCCC
Q 022357          242 ---PKFCVNCVCPGFVKTDINFH-----------AGILSVEEGAESPVKLALLPDG  283 (298)
Q Consensus       242 ---~~i~vn~v~PG~v~t~~~~~-----------~~~~~~~~~a~~~~~~~~~~~~  283 (298)
                         .+++++.|.||++.++....           .++.++++.++..+..+..+..
T Consensus       168 l~~~gi~~~iirpg~~~~~~~~~~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~  223 (251)
T PLN00141        168 IRKSGINYTIVRPGGLTNDPPTGNIVMEPEDTLYEGSISRDQVAEVAVEALLCPES  223 (251)
T ss_pred             HHhcCCcEEEEECCCccCCCCCceEEECCCCccccCcccHHHHHHHHHHHhcChhh
Confidence               48999999999998764211           1357889999998888876553

>PLN02686 cinnamoyl-CoA reductase

Probab=99.68  E-value=1.5e-15  Score=141.46  Aligned_cols=196  Identities=14%  Similarity=0.139  Sum_probs=128.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCC---CCcceeEEEeccCcHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGV---DPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      ..++|++|||||+|+||++++++|+++|++|+++.|+.+....+ ..+...+.   ....+.++.+|+++.+++.++++ 
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~-  127 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD-  127 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH-
Confidence            35679999999999999999999999999999988886554433 23322110   01137788999999999888776 


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                            .+|.+||.|+........                           .......++|+.++.++++++...   .+
T Consensus       128 ------~~d~V~hlA~~~~~~~~~---------------------------~~~~~~~~~nv~gt~~llea~~~~---~~  171 (367)
T PLN02686        128 ------GCAGVFHTSAFVDPAGLS---------------------------GYTKSMAELEAKASENVIEACVRT---ES  171 (367)
T ss_pred             ------hccEEEecCeeecccccc---------------------------cccchhhhhhHHHHHHHHHHHHhc---CC
Confidence                  468999999875432100                           000133567899999999887542   12


Q ss_pred             CCcEEEEccCccc-ccCC-chHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSA-LKDL-PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       160 ~g~iv~vsS~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l  237 (298)
                      ..++|++||..+. .+.. +....... +...+.                    ...........|+.||.+.+.+++.+
T Consensus       172 v~r~V~~SS~~~~vyg~~~~~~~~~~i-~E~~~~--------------------~~~~~~~p~~~Y~~sK~~~E~~~~~~  230 (367)
T PLN02686        172 VRKCVFTSSLLACVWRQNYPHDLPPVI-DEESWS--------------------DESFCRDNKLWYALGKLKAEKAAWRA  230 (367)
T ss_pred             ccEEEEeccHHHhcccccCCCCCCccc-CCCCCC--------------------ChhhcccccchHHHHHHHHHHHHHHH
Confidence            3589999996421 1100 00000000 000000                    00011123457999999999999998


Q ss_pred             HHhCCCcEEEEeeCCeeecCC
Q 022357          238 AKRYPKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       238 a~e~~~i~vn~v~PG~v~t~~  258 (298)
                      +.++ +++++++.|+.|.+|.
T Consensus       231 ~~~~-gl~~v~lRp~~vyGp~  250 (367)
T PLN02686        231 ARGK-GLKLATICPALVTGPG  250 (367)
T ss_pred             HHhc-CceEEEEcCCceECCC
Confidence            8874 8999999999999984

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.68  E-value=1.4e-15  Score=138.20  Aligned_cols=179  Identities=22%  Similarity=0.148  Sum_probs=125.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      ++|||||+|+||++++++|+++|++|++.+|...........+....    .+..+.+|+++.++++++++.     +++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~-----~~~   71 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERIT----RVTFVEGDLRDRELLDRLFEE-----HKI   71 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcccc----ceEEEECCCCCHHHHHHHHHh-----CCC
Confidence            48999999999999999999999999988765433222222222111    277889999999998888763     379


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |++|||||......                           ..+...+.+.+|+.++..+++++..    .+.+++|++|
T Consensus        72 d~vv~~ag~~~~~~---------------------------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~s  120 (328)
T TIGR01179        72 DAVIHFAGLIAVGE---------------------------SVQDPLKYYRNNVVNTLNLLEAMQQ----TGVKKFIFSS  120 (328)
T ss_pred             cEEEECccccCcch---------------------------hhcCchhhhhhhHHHHHHHHHHHHh----cCCCEEEEec
Confidence            99999999753221                           1223346688999999999987643    3346899998


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVN  247 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn  247 (298)
                      |....... .                              .....+..+......|+.+|++.+.+++.++.+..++++.
T Consensus       121 s~~~~g~~-~------------------------------~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~  169 (328)
T TIGR01179       121 SAAVYGEP-S------------------------------SIPISEDSPLGPINPYGRSKLMSERILRDLSKADPGLSYV  169 (328)
T ss_pred             chhhcCCC-C------------------------------CCCccccCCCCCCCchHHHHHHHHHHHHHHHHhccCCCEE
Confidence            85433211 0                              0001112222345789999999999999998875688888


Q ss_pred             EeeCCeeecC
Q 022357          248 CVCPGFVKTD  257 (298)
Q Consensus       248 ~v~PG~v~t~  257 (298)
                      .+.|+.+..+
T Consensus       170 ilR~~~v~g~  179 (328)
T TIGR01179       170 ILRYFNVAGA  179 (328)
T ss_pred             EEecCcccCC
Confidence            8888766554

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.67  E-value=1e-15  Score=137.36  Aligned_cols=216  Identities=21%  Similarity=0.196  Sum_probs=144.5

Q ss_pred             EEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357           10 VVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus        10 lITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      |||||+|.||++++++|+++|  ++|.++++.+....  ...+....    ...++.+|+++.+++.++++       .+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~~----~~~~~~~Di~d~~~l~~a~~-------g~   67 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQKSG----VKEYIQGDITDPESLEEALE-------GV   67 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhccc----ceeEEEeccccHHHHHHHhc-------CC
Confidence            699999999999999999999  78988888765322  11122111    13489999999999999886       67


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+|||.|+......                            ....++.+++|+.|+-++++++..    .+-.++|++|
T Consensus        68 d~V~H~Aa~~~~~~----------------------------~~~~~~~~~vNV~GT~nvl~aa~~----~~VkrlVytS  115 (280)
T PF01073_consen   68 DVVFHTAAPVPPWG----------------------------DYPPEEYYKVNVDGTRNVLEAARK----AGVKRLVYTS  115 (280)
T ss_pred             ceEEEeCccccccC----------------------------cccHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEc
Confidence            99999999765431                            123456799999999999999875    3557999999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH---hC-CC
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK---RY-PK  243 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~---e~-~~  243 (298)
                      |...+......  +...+                       +......+......|+.||+..+.++.....   +. ..
T Consensus       116 S~~vv~~~~~~--~~~~~-----------------------~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~  170 (280)
T PF01073_consen  116 SISVVFDNYKG--DPIIN-----------------------GDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGR  170 (280)
T ss_pred             CcceeEeccCC--CCccc-----------------------CCcCCcccccccCchHHHHHHHHHHHHhhcccccccccc
Confidence            99877542100  00000                       0000001112466899999999999877654   11 35


Q ss_pred             cEEEEeeCCeeecCCCCC------------------------CCCCChhhhhhhhhhhhc---cC--CCCCcceEeccCc
Q 022357          244 FCVNCVCPGFVKTDINFH------------------------AGILSVEEGAESPVKLAL---LP--DGGPTGRFFLRKE  294 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~~------------------------~~~~~~~~~a~~~~~~~~---~~--~~~~~~~~~l~~~  294 (298)
                      ++..+|.|..|..|....                        ..+...++.|...+..+.   .+  .....|+.|..+|
T Consensus       171 l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd  250 (280)
T PF01073_consen  171 LRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITD  250 (280)
T ss_pred             eeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEEC
Confidence            788889999998874321                        113467888877655442   23  2445555555444


Q ss_pred             c
Q 022357          295 E  295 (298)
Q Consensus       295 ~  295 (298)
                      .
T Consensus       251 ~  251 (280)
T PF01073_consen  251 G  251 (280)
T ss_pred             C
Confidence            3

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.66  E-value=1.4e-15  Score=132.96  Aligned_cols=176  Identities=23%  Similarity=0.178  Sum_probs=127.7

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++|||||.|.||+++++.+.++.-  +|+.++.-.- ...+.++.+...    .+..+++.|++|.+.+.+++++-   
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~----~~~~fv~~DI~D~~~v~~~~~~~---   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDS----PRYRFVQGDICDRELVDRLFKEY---   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcC----CCceEEeccccCHHHHHHHHHhc---
Confidence            4689999999999999999998754  4666664321 111222222221    24899999999999988888743   


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        .+|+++|-|+-...                           +.++......+++|++|++.|++++.....+   -|+
T Consensus        74 --~~D~VvhfAAESHV---------------------------DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf  121 (340)
T COG1088          74 --QPDAVVHFAAESHV---------------------------DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRF  121 (340)
T ss_pred             --CCCeEEEechhccc---------------------------cccccChhhhhhcchHHHHHHHHHHHHhccc---ceE
Confidence              79999999986532                           2466666778999999999999999886532   489


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      +.||+-.-.            ++..                 ...+.+.+..+...++.|++||||...|+|++.+.| |
T Consensus       122 ~HISTDEVY------------G~l~-----------------~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TY-g  171 (340)
T COG1088         122 HHISTDEVY------------GDLG-----------------LDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTY-G  171 (340)
T ss_pred             EEecccccc------------cccc-----------------CCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc-C
Confidence            999984322            1110                 111246677888889999999999999999999998 5


Q ss_pred             cEEEEeeC
Q 022357          244 FCVNCVCP  251 (298)
Q Consensus       244 i~vn~v~P  251 (298)
                      +.++...+
T Consensus       172 lp~~Itrc  179 (340)
T COG1088         172 LPATITRC  179 (340)
T ss_pred             CceEEecC
Confidence            55544444

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.66  E-value=6.5e-15  Score=139.20  Aligned_cols=173  Identities=24%  Similarity=0.179  Sum_probs=140.5

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .++.||++|||||+|.||+++++++++.+. ++++.+|++.+.-....+++.... ..++.++-+|++|.+.+..+++..
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~~~~~~~igdVrD~~~~~~~~~~~  324 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-ELKLRFYIGDVRDRDRVERAMEGH  324 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC-CcceEEEecccccHHHHHHHHhcC
Confidence            457899999999999999999999999876 688999999888888888887533 234889999999999999988744


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                           ++|+|+|+|+.-..+                           .-...+.|.+.+|++|+.++++++..    ++-
T Consensus       325 -----kvd~VfHAAA~KHVP---------------------------l~E~nP~Eai~tNV~GT~nv~~aa~~----~~V  368 (588)
T COG1086         325 -----KVDIVFHAAALKHVP---------------------------LVEYNPEEAIKTNVLGTENVAEAAIK----NGV  368 (588)
T ss_pred             -----CCceEEEhhhhccCc---------------------------chhcCHHHHHHHhhHhHHHHHHHHHH----hCC
Confidence                 799999999864332                           12244557899999999999999976    455


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      .++|.+|+.-+..|                                             -+.|+++|...+.++++++..
T Consensus       369 ~~~V~iSTDKAV~P---------------------------------------------tNvmGaTKr~aE~~~~a~~~~  403 (588)
T COG1086         369 KKFVLISTDKAVNP---------------------------------------------TNVMGATKRLAEKLFQAANRN  403 (588)
T ss_pred             CEEEEEecCcccCC---------------------------------------------chHhhHHHHHHHHHHHHHhhc
Confidence            79999999666643                                             478999999999999999887


Q ss_pred             CC--CcEEEEeeCCeeec
Q 022357          241 YP--KFCVNCVCPGFVKT  256 (298)
Q Consensus       241 ~~--~i~vn~v~PG~v~t  256 (298)
                      ..  +-++.+|.=|=|..
T Consensus       404 ~~~~~T~f~~VRFGNVlG  421 (588)
T COG1086         404 VSGTGTRFCVVRFGNVLG  421 (588)
T ss_pred             cCCCCcEEEEEEecceec
Confidence            64  47777777775544

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.65  E-value=7.1e-15  Score=129.14  Aligned_cols=161  Identities=24%  Similarity=0.210  Sum_probs=125.9

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      +++|||||.|-||++++.+|++.|++|++.+.....-.+.+....        ..+++.|+.|.+-+.+++++-     +
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~--------~~f~~gDi~D~~~L~~vf~~~-----~   67 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ--------FKFYEGDLLDRALLTAVFEEN-----K   67 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc--------CceEEeccccHHHHHHHHHhc-----C
Confidence            479999999999999999999999999999977655444444432        478999999999988888754     8


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      ||.|||-||....+                           .+.+...+.++.|+.|+..|++++...    +..+|||-
T Consensus        68 idaViHFAa~~~Vg---------------------------ESv~~Pl~Yy~NNv~gTl~Ll~am~~~----gv~~~vFS  116 (329)
T COG1087          68 IDAVVHFAASISVG---------------------------ESVQNPLKYYDNNVVGTLNLIEAMLQT----GVKKFIFS  116 (329)
T ss_pred             CCEEEECccccccc---------------------------hhhhCHHHHHhhchHhHHHHHHHHHHh----CCCEEEEe
Confidence            99999999987654                           356667789999999999999988663    45678887


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      ||.+.....                               ..-.+.+..+......|+.||.+.+.+.+.+++-++
T Consensus       117 StAavYG~p-------------------------------~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         117 STAAVYGEP-------------------------------TTSPISETSPLAPINPYGRSKLMSEEILRDAAKANP  161 (329)
T ss_pred             cchhhcCCC-------------------------------CCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC
Confidence            775543211                               112245555555678899999999999999998874

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.62  E-value=1.1e-14  Score=132.76  Aligned_cols=171  Identities=20%  Similarity=0.075  Sum_probs=123.2

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++++||||+|+||+.+++.|+++|++|++++|++.....    +...     .+.++.+|+++.++++++++       .
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~-----~~~~~~~D~~~~~~l~~~~~-------~   64 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LEGL-----DVEIVEGDLRDPASLRKAVA-------G   64 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cccC-----CceEEEeeCCCHHHHHHHHh-------C
Confidence            369999999999999999999999999999998654321    1111     27789999999998888775       6


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+|||+|+.....                             .+...+.+++|+.++.++++++..    .+.+++|++
T Consensus        65 ~d~vi~~a~~~~~~-----------------------------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~  111 (328)
T TIGR03466        65 CRALFHVAADYRLW-----------------------------APDPEEMYAANVEGTRNLLRAALE----AGVERVVYT  111 (328)
T ss_pred             CCEEEEeceecccC-----------------------------CCCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEE
Confidence            79999999753211                             112345688999999999998764    234699999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCC---CCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC---PHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      ||..........                              ....+..+.   .....|+.+|.+.+.+++.++.++ +
T Consensus       112 SS~~~~~~~~~~------------------------------~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~  160 (328)
T TIGR03466       112 SSVATLGVRGDG------------------------------TPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEK-G  160 (328)
T ss_pred             echhhcCcCCCC------------------------------CCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhc-C
Confidence            997654321000                              000111111   113579999999999999988764 8


Q ss_pred             cEEEEeeCCeeecC
Q 022357          244 FCVNCVCPGFVKTD  257 (298)
Q Consensus       244 i~vn~v~PG~v~t~  257 (298)
                      +.+..+.|+.+..+
T Consensus       161 ~~~~ilR~~~~~G~  174 (328)
T TIGR03466       161 LPVVIVNPSTPIGP  174 (328)
T ss_pred             CCEEEEeCCccCCC
Confidence            88999999887664

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.61  E-value=2.6e-14  Score=124.13  Aligned_cols=174  Identities=25%  Similarity=0.238  Sum_probs=132.4

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCcc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~id   88 (298)
                      ||||||+|.||++++++|+++|+.|+.+.|............        .+.++.+|+.+.++++++++..     .+|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~--------~~~~~~~dl~~~~~~~~~~~~~-----~~d   67 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL--------NVEFVIGDLTDKEQLEKLLEKA-----NID   67 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT--------TEEEEESETTSHHHHHHHHHHH-----TES
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc--------eEEEEEeecccccccccccccc-----Cce
Confidence            799999999999999999999999998888766533322222        2899999999999999998866     799


Q ss_pred             EEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEcc
Q 022357           89 ILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  168 (298)
Q Consensus        89 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  168 (298)
                      .|||+|+.....                           ...+...+.+..|+.++.++++++...    +..++|++||
T Consensus        68 ~vi~~a~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~sS  116 (236)
T PF01370_consen   68 VVIHLAAFSSNP---------------------------ESFEDPEEIIEANVQGTRNLLEAAREA----GVKRFIFLSS  116 (236)
T ss_dssp             EEEEEBSSSSHH---------------------------HHHHSHHHHHHHHHHHHHHHHHHHHHH----TTSEEEEEEE
T ss_pred             EEEEeecccccc---------------------------ccccccccccccccccccccccccccc----cccccccccc
Confidence            999999875311                           133555677888998888888888653    3369999999


Q ss_pred             CcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEEE
Q 022357          169 YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNC  248 (298)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn~  248 (298)
                      ....... .                              ...+.+..+......|+.+|...+.+++.+.... ++++..
T Consensus       117 ~~~y~~~-~------------------------------~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~-~~~~~~  164 (236)
T PF01370_consen  117 ASVYGDP-D------------------------------GEPIDEDSPINPLSPYGASKRAAEELLRDYAKKY-GLRVTI  164 (236)
T ss_dssp             GGGGTSS-S------------------------------SSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH-TSEEEE
T ss_pred             ccccccc-c------------------------------cccccccccccccccccccccccccccccccccc-cccccc
Confidence            5433221 0                              0112222333446679999999999999998886 999999


Q ss_pred             eeCCeeecCC
Q 022357          249 VCPGFVKTDI  258 (298)
Q Consensus       249 v~PG~v~t~~  258 (298)
                      +.|+.+..+.
T Consensus       165 ~R~~~vyG~~  174 (236)
T PF01370_consen  165 LRPPNVYGPG  174 (236)
T ss_dssp             EEESEEESTT
T ss_pred             cccccccccc
Confidence            9999999987

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02427 UDP-apiose/xylose synthase

Probab=99.61  E-value=1.8e-14  Score=134.99  Aligned_cols=202  Identities=13%  Similarity=0.066  Sum_probs=122.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.++||||||+|.||++++++|+++ |++|++++|+..+....... .. .....++.++.+|++|.+.++++++     
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~-~~-~~~~~~~~~~~~Dl~d~~~l~~~~~-----   85 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEP-DT-VPWSGRIQFHRINIKHDSRLEGLIK-----   85 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcc-cc-ccCCCCeEEEEcCCCChHHHHHHhh-----
Confidence            4568999999999999999999998 59999999876543322111 00 0011238899999999988877765     


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        .+|+|||+|+...+..                           ......+.+..|+.++.++++++...    . .++
T Consensus        86 --~~d~ViHlAa~~~~~~---------------------------~~~~~~~~~~~n~~gt~~ll~aa~~~----~-~r~  131 (386)
T PLN02427         86 --MADLTINLAAICTPAD---------------------------YNTRPLDTIYSNFIDALPVVKYCSEN----N-KRL  131 (386)
T ss_pred             --cCCEEEEcccccChhh---------------------------hhhChHHHHHHHHHHHHHHHHHHHhc----C-CEE
Confidence              4799999999754310                           00111234567999999999887532    2 589


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCC-CCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGW-CPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      |++||......... .. ..+..+  +.. +     ..++...+........+ ....+.|+.||.+.+.+++.++.. .
T Consensus       132 v~~SS~~vYg~~~~-~~-~~e~~p--~~~-~-----~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~  200 (386)
T PLN02427        132 IHFSTCEVYGKTIG-SF-LPKDHP--LRQ-D-----PAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-N  200 (386)
T ss_pred             EEEeeeeeeCCCcC-CC-CCcccc--ccc-c-----cccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh-c
Confidence            99999754321100 00 000000  000 0     00000000000000000 012357999999999999887766 4


Q ss_pred             CcEEEEeeCCeeecCC
Q 022357          243 KFCVNCVCPGFVKTDI  258 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~  258 (298)
                      ++.+..+.|+.|..|.
T Consensus       201 g~~~~ilR~~~vyGp~  216 (386)
T PLN02427        201 GLEFTIVRPFNWIGPR  216 (386)
T ss_pred             CCceEEecccceeCCC
Confidence            8888889998887753

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.59  E-value=8.4e-15  Score=130.19  Aligned_cols=191  Identities=24%  Similarity=0.224  Sum_probs=129.6

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCC-Cc--ceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVD-PE--LLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~-~~--~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ||||||+|.||++++++|++.+. +|++++|++..+-....++...... .-  .+.++.+|++|.+.+..+++..    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            79999999999999999999874 7999999999988888888643322 11  1234578999999988887644    


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       ++|+|+|.|+.--.+                           .-.+...+.+++|+.|+.++++++...    +-.++|
T Consensus        77 -~pdiVfHaAA~KhVp---------------------------l~E~~p~eav~tNv~GT~nv~~aa~~~----~v~~~v  124 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVP---------------------------LMEDNPFEAVKTNVLGTQNVAEAAIEH----GVERFV  124 (293)
T ss_dssp             -T-SEEEE------HH---------------------------HHCCCHHHHHHHHCHHHHHHHHHHHHT----T-SEEE
T ss_pred             -CCCEEEEChhcCCCC---------------------------hHHhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEE
Confidence             899999999864322                           122345678999999999999999874    456999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++|+.-+..+                                             .+.|++||...+.++.+.+...  .
T Consensus       125 ~ISTDKAv~P---------------------------------------------tnvmGatKrlaE~l~~~~~~~~~~~  159 (293)
T PF02719_consen  125 FISTDKAVNP---------------------------------------------TNVMGATKRLAEKLVQAANQYSGNS  159 (293)
T ss_dssp             EEEECGCSS-----------------------------------------------SHHHHHHHHHHHHHHHHCCTSSSS
T ss_pred             EccccccCCC---------------------------------------------CcHHHHHHHHHHHHHHHHhhhCCCC
Confidence            9999665532                                             5889999999999999988877  4


Q ss_pred             CcEEEEeeCCeeecCCCCC-----------------C-----CCCChhhhhhhhhhhhcc
Q 022357          243 KFCVNCVCPGFVKTDINFH-----------------A-----GILSVEEGAESPVKLALL  280 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~-----------------~-----~~~~~~~~a~~~~~~~~~  280 (298)
                      +.++.+|.=|=|...-..-                 +     -.++.+++++-.+.....
T Consensus       160 ~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~  219 (293)
T PF02719_consen  160 DTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAAL  219 (293)
T ss_dssp             --EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH
T ss_pred             CcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhh
Confidence            5667777666543311100                 0     135788888777766654

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.58  E-value=6e-14  Score=124.44  Aligned_cols=170  Identities=22%  Similarity=0.222  Sum_probs=129.4

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +++||||||.|-||.+.+.+|.++|+.|++++.-.......+...+........+.+.+.|++|.+.++++++..     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            578999999999999999999999999999997655544445555543332345999999999999999998876     


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|.|+|-|+....+                           .+.+.....+..|+.|+++++..+..+    +-..+|+
T Consensus        77 ~fd~V~Hfa~~~~vg---------------------------eS~~~p~~Y~~nNi~gtlnlLe~~~~~----~~~~~V~  125 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVG---------------------------ESMENPLSYYHNNIAGTLNLLEVMKAH----NVKALVF  125 (343)
T ss_pred             CCceEEeehhhhccc---------------------------hhhhCchhheehhhhhHHHHHHHHHHc----CCceEEE
Confidence            799999999987665                           344555788999999999999988664    3468888


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCC-CCchhhhHHHHHHHHHHHHHHhCC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCP-HSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      .||......+ .                              .-.+.+..+-. ..+.|+.+|.+++...+.+..-++
T Consensus       126 sssatvYG~p-~------------------------------~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  126 SSSATVYGLP-T------------------------------KVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             ecceeeecCc-c------------------------------eeeccCcCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence            8886644321 0                              01122222223 467899999999999999988874

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.57  E-value=4e-14  Score=128.45  Aligned_cols=171  Identities=21%  Similarity=0.234  Sum_probs=114.0

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH--hcCC
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT--QFGK   86 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~--~~g~   86 (298)
                      +|||||+|.||++++++|+++|++++++.|+.......             .....+|+.|..+.+.+++.+.+  .+++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   68 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------------VNLVDLDIADYMDKEDFLAQIMAGDDFGD   68 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-------------HhhhhhhhhhhhhHHHHHHHHhcccccCC
Confidence            79999999999999999999999877766654321110             01234577776666666555542  3457


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+|||+|+.....                    .|      +.   ...++.|+.++.++++++..    .+ .++|++
T Consensus        69 ~d~Vih~A~~~~~~--------------------~~------~~---~~~~~~n~~~t~~ll~~~~~----~~-~~~i~~  114 (308)
T PRK11150         69 IEAIFHEGACSSTT--------------------EW------DG---KYMMDNNYQYSKELLHYCLE----RE-IPFLYA  114 (308)
T ss_pred             ccEEEECceecCCc--------------------CC------Ch---HHHHHHHHHHHHHHHHHHHH----cC-CcEEEE
Confidence            99999999864321                    00      11   24689999999999999854    23 379999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      ||.........                               ....+..+....+.|+.||.+.+.+++.++.+ .++.+
T Consensus       115 SS~~vyg~~~~-------------------------------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~  162 (308)
T PRK11150        115 SSAATYGGRTD-------------------------------DFIEEREYEKPLNVYGYSKFLFDEYVRQILPE-ANSQI  162 (308)
T ss_pred             cchHHhCcCCC-------------------------------CCCccCCCCCCCCHHHHHHHHHHHHHHHHHHH-cCCCE
Confidence            99754321100                               00111122233568999999999999988766 47778


Q ss_pred             EEeeCCeeecCC
Q 022357          247 NCVCPGFVKTDI  258 (298)
Q Consensus       247 n~v~PG~v~t~~  258 (298)
                      ..+.|+.+..+.
T Consensus       163 ~~lR~~~vyG~~  174 (308)
T PRK11150        163 CGFRYFNVYGPR  174 (308)
T ss_pred             EEEeeeeecCCC
Confidence            888887776653

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.56  E-value=1.3e-13  Score=127.09  Aligned_cols=181  Identities=18%  Similarity=0.125  Sum_probs=118.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhh---HHHHHHHHhcCC---C-C-cceeEEEeccCcHH------
Q 022357            8 YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRG---LEAVEKLKASGV---D-P-ELLLFHQLDISDLA------   71 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~---~~~~~~~~~~~~---~-~-~~~~~~~~Dls~~~------   71 (298)
                      +++||||||+||++++++|+++|  ++|+++.|+....   +...+.+.....   . . .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  7799999986532   122222222110   0 0 24889999998653      


Q ss_pred             HHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHH
Q 022357           72 SVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEAL  151 (298)
Q Consensus        72 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~  151 (298)
                      ....+.       ..+|++||||+.....                              ..+++..++|+.++..+++.+
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~------------------------------~~~~~~~~~nv~g~~~ll~~a  123 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV------------------------------YPYSELRAANVLGTREVLRLA  123 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC------------------------------CcHHHHhhhhhHHHHHHHHHH
Confidence            222222       3789999999975321                              112355789999999999887


Q ss_pred             hhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHH
Q 022357          152 IPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVIN  231 (298)
Q Consensus       152 ~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~  231 (298)
                      ...    +..+++++||...........  ....+                        ............|+.||.+.+
T Consensus       124 ~~~----~~~~~v~iSS~~v~~~~~~~~--~~~~~------------------------~~~~~~~~~~~~Y~~sK~~~E  173 (367)
T TIGR01746       124 ASG----RAKPLHYVSTISVLAAIDLST--VTEDD------------------------AIVTPPPGLAGGYAQSKWVAE  173 (367)
T ss_pred             hhC----CCceEEEEccccccCCcCCCC--ccccc------------------------cccccccccCCChHHHHHHHH
Confidence            652    334699999986653210000  00000                        000001122457999999999


Q ss_pred             HHHHHHHHhCCCcEEEEeeCCeeecC
Q 022357          232 AYTRILAKRYPKFCVNCVCPGFVKTD  257 (298)
Q Consensus       232 ~l~~~la~e~~~i~vn~v~PG~v~t~  257 (298)
                      .+++.++..  +++++.+.||.+.++
T Consensus       174 ~~~~~~~~~--g~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       174 LLVREASDR--GLPVTIVRPGRILGN  197 (367)
T ss_pred             HHHHHHHhc--CCCEEEECCCceeec
Confidence            999876554  899999999999875

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.56  E-value=7.1e-14  Score=129.10  Aligned_cols=178  Identities=13%  Similarity=0.043  Sum_probs=115.6

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccC-cHHHHHHHHHHHHHhc
Q 022357            7 KYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS-DLASVSSLADFIKTQF   84 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls-~~~~v~~~~~~~~~~~   84 (298)
                      ++++||||+|.||++++++|+++ |++|++++|+......    +...    ..+.++.+|++ +.+.+.++++      
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~~~----~~~~~~~~Dl~~~~~~~~~~~~------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LVNH----PRMHFFEGDITINKEWIEYHVK------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hccC----CCeEEEeCCCCCCHHHHHHHHc------
Confidence            46999999999999999999986 7999999987543221    1111    12888899998 5565555443      


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       .+|+|||+|+...+..                           ..+.....+++|+.++.++++++..    .+ .++|
T Consensus        68 -~~d~ViH~aa~~~~~~---------------------------~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v  114 (347)
T PRK11908         68 -KCDVILPLVAIATPAT---------------------------YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLV  114 (347)
T ss_pred             -CCCEEEECcccCChHH---------------------------hhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEE
Confidence             5899999998754320                           1122346688999999999988764    23 5999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCC-CCCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGW-CPHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      ++||.........        .+  ..+++               ......+ ......|+.||.+.+.+++.++... +
T Consensus       115 ~~SS~~vyg~~~~--------~~--~~ee~---------------~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~  168 (347)
T PRK11908        115 FPSTSEVYGMCPD--------EE--FDPEA---------------SPLVYGPINKPRWIYACSKQLMDRVIWAYGMEE-G  168 (347)
T ss_pred             EEecceeeccCCC--------cC--cCccc---------------cccccCcCCCccchHHHHHHHHHHHHHHHHHHc-C
Confidence            9999754321100        00  00000               0000000 0224579999999999999887764 6


Q ss_pred             cEEEEeeCCeeecC
Q 022357          244 FCVNCVCPGFVKTD  257 (298)
Q Consensus       244 i~vn~v~PG~v~t~  257 (298)
                      +.+..+.|+.+..|
T Consensus       169 ~~~~ilR~~~v~Gp  182 (347)
T PRK11908        169 LNFTLFRPFNWIGP  182 (347)
T ss_pred             CCeEEEeeeeeeCC
Confidence            66666666655443

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.54  E-value=9.1e-14  Score=138.85  Aligned_cols=174  Identities=12%  Similarity=0.012  Sum_probs=120.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHH-HHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLAS-VSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~-v~~~~~~~~~   82 (298)
                      .+++||||||+|.||++++++|+++ |++|++++|+......    ...  .  ..+.++.+|+++..+ ++++++    
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~--~--~~~~~~~gDl~d~~~~l~~~l~----  381 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FLG--H--PRFHFVEGDISIHSEWIEYHIK----  381 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hcC--C--CceEEEeccccCcHHHHHHHhc----
Confidence            4678999999999999999999986 7999999997643221    111  1  127888999998654 344332    


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                         .+|+|||+|+...+..                           ..+...+.+++|+.++..+++++...    + .+
T Consensus       382 ---~~D~ViHlAa~~~~~~---------------------------~~~~~~~~~~~Nv~~t~~ll~a~~~~----~-~~  426 (660)
T PRK08125        382 ---KCDVVLPLVAIATPIE---------------------------YTRNPLRVFELDFEENLKIIRYCVKY----N-KR  426 (660)
T ss_pred             ---CCCEEEECccccCchh---------------------------hccCHHHHHHhhHHHHHHHHHHHHhc----C-Ce
Confidence               6899999999764321                           11122356889999999999998752    2 58


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCC------CC-CCCchhhhHHHHHHHHHH
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRG------WC-PHSSAYKVSKAVINAYTR  235 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~Y~~sK~al~~l~~  235 (298)
                      +|++||.........                               ..+.+..      +. ...+.|+.||.+.+.+++
T Consensus       427 ~V~~SS~~vyg~~~~-------------------------------~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~  475 (660)
T PRK08125        427 IIFPSTSEVYGMCTD-------------------------------KYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIW  475 (660)
T ss_pred             EEEEcchhhcCCCCC-------------------------------CCcCccccccccCCCCCCccchHHHHHHHHHHHH
Confidence            999999643321100                               0000111      10 124579999999999999


Q ss_pred             HHHHhCCCcEEEEeeCCeeecC
Q 022357          236 ILAKRYPKFCVNCVCPGFVKTD  257 (298)
Q Consensus       236 ~la~e~~~i~vn~v~PG~v~t~  257 (298)
                      .++..+ ++++..+.|+.+..|
T Consensus       476 ~~~~~~-g~~~~ilR~~~vyGp  496 (660)
T PRK08125        476 AYGEKE-GLRFTLFRPFNWMGP  496 (660)
T ss_pred             HHHHhc-CCceEEEEEceeeCC
Confidence            988775 788888888877765

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.52  E-value=1.7e-13  Score=124.19  Aligned_cols=144  Identities=15%  Similarity=0.069  Sum_probs=102.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      ++|||||+|.||++++++|+++| +|++++|...                    .+..|++|.+.++++++..     ++
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~--------------------~~~~Dl~d~~~~~~~~~~~-----~~   55 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST--------------------DYCGDFSNPEGVAETVRKI-----RP   55 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc--------------------cccCCCCCHHHHHHHHHhc-----CC
Confidence            69999999999999999999999 7888887521                    2357999999988887643     68


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+|||+|+.....                           ...+.....+.+|+.++.++++++...    + .++|++|
T Consensus        56 D~Vih~Aa~~~~~---------------------------~~~~~~~~~~~~N~~~~~~l~~aa~~~----g-~~~v~~S  103 (299)
T PRK09987         56 DVIVNAAAHTAVD---------------------------KAESEPEFAQLLNATSVEAIAKAANEV----G-AWVVHYS  103 (299)
T ss_pred             CEEEECCccCCcc---------------------------hhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEc
Confidence            9999999976432                           011223455789999999999988652    2 4899999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |..-..+..                               .....+..++.....|+.||.+.+.+++.+..+
T Consensus       104 s~~Vy~~~~-------------------------------~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~  145 (299)
T PRK09987        104 TDYVFPGTG-------------------------------DIPWQETDATAPLNVYGETKLAGEKALQEHCAK  145 (299)
T ss_pred             cceEECCCC-------------------------------CCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence            865432210                               001122223344578999999999998776543

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.52  E-value=1.9e-13  Score=122.60  Aligned_cols=153  Identities=21%  Similarity=0.177  Sum_probs=110.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +++||||+|.||++++++|.++|++|++++|+                        .+|+.+.++++++++..     .+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------------~~d~~~~~~~~~~~~~~-----~~   51 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------------QLDLTDPEALERLLRAI-----RP   51 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------------ccCCCCHHHHHHHHHhC-----CC
Confidence            37999999999999999999999999999884                        36899999988887643     68


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+|||+||......                           ......+.+++|+.++..+++++..    .+ .++|++|
T Consensus        52 d~vi~~a~~~~~~~---------------------------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~S   99 (287)
T TIGR01214        52 DAVVNTAAYTDVDG---------------------------AESDPEKAFAVNALAPQNLARAAAR----HG-ARLVHIS   99 (287)
T ss_pred             CEEEECCccccccc---------------------------cccCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEe
Confidence            99999999753210                           1122345688999999999998754    22 4899999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVN  247 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn  247 (298)
                      |.....+..                               ...+.+..++.....|+.+|.+.+.+++.+     +..+.
T Consensus       100 s~~vy~~~~-------------------------------~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~-----~~~~~  143 (287)
T TIGR01214       100 TDYVFDGEG-------------------------------KRPYREDDATNPLNVYGQSKLAGEQAIRAA-----GPNAL  143 (287)
T ss_pred             eeeeecCCC-------------------------------CCCCCCCCCCCCcchhhHHHHHHHHHHHHh-----CCCeE
Confidence            965332110                               000111222233568999999999888765     34677


Q ss_pred             EeeCCeeecC
Q 022357          248 CVCPGFVKTD  257 (298)
Q Consensus       248 ~v~PG~v~t~  257 (298)
                      .+.|+.+..+
T Consensus       144 ilR~~~v~G~  153 (287)
T TIGR01214       144 IVRTSWLYGG  153 (287)
T ss_pred             EEEeeecccC
Confidence            7888877654

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.52  E-value=4.5e-13  Score=134.13  Aligned_cols=188  Identities=18%  Similarity=0.133  Sum_probs=124.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~--G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      ....++||||||+|.||++++++|+++  |++|++++|.... ... ..+.... ....+.++.+|+++.+.+..++.. 
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~~-~~l~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~-   78 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SNL-KNLNPSK-SSPNFKFVKGDIASADLVNYLLIT-   78 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-chh-hhhhhcc-cCCCeEEEECCCCChHHHHHHHhh-
Confidence            456789999999999999999999998  6889988875311 111 1111110 011388899999998877665432 


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                          ..+|+|||+|+.....                           .......+.+++|+.++..+++++...   ...
T Consensus        79 ----~~~D~ViHlAa~~~~~---------------------------~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~v  124 (668)
T PLN02260         79 ----EGIDTIMHFAAQTHVD---------------------------NSFGNSFEFTKNNIYGTHVLLEACKVT---GQI  124 (668)
T ss_pred             ----cCCCEEEECCCccCch---------------------------hhhhCHHHHHHHHHHHHHHHHHHHHhc---CCC
Confidence                2799999999976432                           111223466889999999999987542   224


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      .++|++||.......... .  .                        .+ ..+..+......|+.+|.+.+.+++.++.+
T Consensus       125 kr~I~~SS~~vyg~~~~~-~--~------------------------~~-~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~  176 (668)
T PLN02260        125 RRFIHVSTDEVYGETDED-A--D------------------------VG-NHEASQLLPTNPYSATKAGAEMLVMAYGRS  176 (668)
T ss_pred             cEEEEEcchHHhCCCccc-c--c------------------------cC-ccccCCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence            699999996533211000 0  0                        00 001111223567999999999999988877


Q ss_pred             CCCcEEEEeeCCeeecC
Q 022357          241 YPKFCVNCVCPGFVKTD  257 (298)
Q Consensus       241 ~~~i~vn~v~PG~v~t~  257 (298)
                      + ++.+..+.|+.|..+
T Consensus       177 ~-~l~~vilR~~~VyGp  192 (668)
T PLN02260        177 Y-GLPVITTRGNNVYGP  192 (668)
T ss_pred             c-CCCEEEECcccccCc
Confidence            5 777888888877665

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.51  E-value=4.8e-13  Score=125.62  Aligned_cols=162  Identities=19%  Similarity=0.113  Sum_probs=113.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH--HHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE--AVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++++||||||+||++++++|+++|++|++++|+..+...  ...++.....   .+.++++|++|.++++++++..  
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~---~v~~v~~Dl~d~~~l~~~~~~~--  133 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELP---GAEVVFGDVTDADSLRKVLFSE--  133 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcC---CceEEEeeCCCHHHHHHHHHHh--
Confidence            46799999999999999999999999999999998754321  1111211111   2788999999999998887643  


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                       .+++|+||||++.....                                ....+++|+.++.++++++..    .+.++
T Consensus       134 -~~~~D~Vi~~aa~~~~~--------------------------------~~~~~~vn~~~~~~ll~aa~~----~gv~r  176 (390)
T PLN02657        134 -GDPVDVVVSCLASRTGG--------------------------------VKDSWKIDYQATKNSLDAGRE----VGAKH  176 (390)
T ss_pred             -CCCCcEEEECCccCCCC--------------------------------CccchhhHHHHHHHHHHHHHH----cCCCE
Confidence             12699999999853210                                012356678888888877643    34579


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      +|++||.....                                             ....|..+|...+...+.   ...
T Consensus       177 ~V~iSS~~v~~---------------------------------------------p~~~~~~sK~~~E~~l~~---~~~  208 (390)
T PLN02657        177 FVLLSAICVQK---------------------------------------------PLLEFQRAKLKFEAELQA---LDS  208 (390)
T ss_pred             EEEEeeccccC---------------------------------------------cchHHHHHHHHHHHHHHh---ccC
Confidence            99999965321                                             123577788888776554   225


Q ss_pred             CcEEEEeeCCeeec
Q 022357          243 KFCVNCVCPGFVKT  256 (298)
Q Consensus       243 ~i~vn~v~PG~v~t  256 (298)
                      +++...|.|+.+..
T Consensus       209 gl~~tIlRp~~~~~  222 (390)
T PLN02657        209 DFTYSIVRPTAFFK  222 (390)
T ss_pred             CCCEEEEccHHHhc
Confidence            78888888876543

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.51  E-value=3.8e-13  Score=122.03  Aligned_cols=171  Identities=16%  Similarity=0.073  Sum_probs=112.5

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +|||||+|.||++++++|.++|+ .|++++|..... . ...+.        ...+..|+++.+.++.+.+.   .+.++
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~~--------~~~~~~d~~~~~~~~~~~~~---~~~~~   67 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K-FLNLA--------DLVIADYIDKEDFLDRLEKG---AFGKI   67 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h-hhhhh--------heeeeccCcchhHHHHHHhh---ccCCC
Confidence            68999999999999999999998 688887764321 1 11111        12456788877766655442   24589


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+|||+|+.....                             .++....+++|+.++..+++++...    + .++|++|
T Consensus        68 D~vvh~A~~~~~~-----------------------------~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~v~~S  113 (314)
T TIGR02197        68 EAIFHQGACSDTT-----------------------------ETDGEYMMENNYQYSKRLLDWCAEK----G-IPFIYAS  113 (314)
T ss_pred             CEEEECccccCcc-----------------------------ccchHHHHHHHHHHHHHHHHHHHHh----C-CcEEEEc
Confidence            9999999964211                             1223456889999999999987652    2 4899999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCC-CCCCchhhhHHHHHHHHHHHHHH-hCCCcE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGW-CPHSSAYKVSKAVINAYTRILAK-RYPKFC  245 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~sK~al~~l~~~la~-e~~~i~  245 (298)
                      |....... .                               +...+... ......|+.||.+.+.+++.... +..++.
T Consensus       114 S~~vy~~~-~-------------------------------~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~  161 (314)
T TIGR02197       114 SAATYGDG-E-------------------------------AGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQ  161 (314)
T ss_pred             cHHhcCCC-C-------------------------------CCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhccCCc
Confidence            96533211 0                               00111111 12356899999999999987443 334567


Q ss_pred             EEEeeCCeeecCC
Q 022357          246 VNCVCPGFVKTDI  258 (298)
Q Consensus       246 vn~v~PG~v~t~~  258 (298)
                      +..+.|+.+..+.
T Consensus       162 ~~~lR~~~vyG~~  174 (314)
T TIGR02197       162 VVGLRYFNVYGPR  174 (314)
T ss_pred             eEEEEEeeccCCC
Confidence            7777777666543

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.51  E-value=4.9e-13  Score=121.01  Aligned_cols=174  Identities=26%  Similarity=0.146  Sum_probs=123.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      .||||||+|.||++++.+|.++|++|+.++|.........          ..+.++.+|+++.+.+..+.+       ..
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~~~-------~~   64 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----------SGVEFVVLDLTDRDLVDELAK-------GV   64 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----------cccceeeecccchHHHHHHHh-------cC
Confidence            3999999999999999999999999999999866433322          127788999999866555554       33


Q ss_pred             -cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           88 -DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        88 -d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                       |++||+|+........                         .. ...+.+.+|+.++.++++++..    .+..++|+.
T Consensus        65 ~d~vih~aa~~~~~~~~-------------------------~~-~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~  114 (314)
T COG0451          65 PDAVIHLAAQSSVPDSN-------------------------AS-DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFA  114 (314)
T ss_pred             CCEEEEccccCchhhhh-------------------------hh-CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEe
Confidence             9999999987543110                         11 3446789999999999999977    345689996


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcC-CCCCCCchhhhHHHHHHHHHHHHHHhCCCcE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANR-GWCPHSSAYKVSKAVINAYTRILAKRYPKFC  245 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~  245 (298)
                      ||....... ...                             ..+.+. .++.....|+.||.+.+.+++..+. ..++.
T Consensus       115 ss~~~~~~~-~~~-----------------------------~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~-~~~~~  163 (314)
T COG0451         115 SSVSVVYGD-PPP-----------------------------LPIDEDLGPPRPLNPYGVSKLAAEQLLRAYAR-LYGLP  163 (314)
T ss_pred             CCCceECCC-CCC-----------------------------CCcccccCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCC
Confidence            664443321 000                             001111 1222233799999999999999988 56889


Q ss_pred             EEEeeCCeeecCCC
Q 022357          246 VNCVCPGFVKTDIN  259 (298)
Q Consensus       246 vn~v~PG~v~t~~~  259 (298)
                      +..+.|+.+..|..
T Consensus       164 ~~ilR~~~vyGp~~  177 (314)
T COG0451         164 VVILRPFNVYGPGD  177 (314)
T ss_pred             eEEEeeeeeeCCCC
Confidence            99999988877653

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.49  E-value=8.2e-13  Score=123.25  Aligned_cols=179  Identities=13%  Similarity=0.011  Sum_probs=120.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++++|||||+|.||+++++.|.++|++|++++|.....      +.....   ...++.+|+++.+.+..+++      
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~~~---~~~~~~~Dl~d~~~~~~~~~------   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSEDMF---CHEFHLVDLRVMENCLKVTK------   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccccc---cceEEECCCCCHHHHHHHHh------
Confidence            468999999999999999999999999999999864321      111100   14567899999887766653      


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       .+|+|||+|+.......                          ........+..|+.++.++++++..    .+..++|
T Consensus        85 -~~D~Vih~Aa~~~~~~~--------------------------~~~~~~~~~~~N~~~t~nll~aa~~----~~vk~~V  133 (370)
T PLN02695         85 -GVDHVFNLAADMGGMGF--------------------------IQSNHSVIMYNNTMISFNMLEAARI----NGVKRFF  133 (370)
T ss_pred             -CCCEEEEcccccCCccc--------------------------cccCchhhHHHHHHHHHHHHHHHHH----hCCCEEE
Confidence             58999999986532100                          0011123467799999999998754    2346999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcC--CCCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANR--GWCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      ++||...+..... .      +                   . ...+.+.  .+....+.|+.+|.+.+.+++.++..+ 
T Consensus       134 ~~SS~~vYg~~~~-~------~-------------------~-~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~-  185 (370)
T PLN02695        134 YASSACIYPEFKQ-L------E-------------------T-NVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF-  185 (370)
T ss_pred             EeCchhhcCCccc-c------C-------------------c-CCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence            9999643321100 0      0                   0 0001111  122346789999999999999887764 


Q ss_pred             CcEEEEeeCCeeecC
Q 022357          243 KFCVNCVCPGFVKTD  257 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~  257 (298)
                      ++++..+.|+.+..|
T Consensus       186 g~~~~ilR~~~vyGp  200 (370)
T PLN02695        186 GIECRIGRFHNIYGP  200 (370)
T ss_pred             CCCEEEEEECCccCC
Confidence            888888888877776

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.46  E-value=1.3e-12  Score=124.41  Aligned_cols=178  Identities=18%  Similarity=0.017  Sum_probs=114.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++++||||||+|.||++++++|+++|++|++++|............  ..  ..++.++..|+.+..     +       
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~--~~--~~~~~~i~~D~~~~~-----l-------  181 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHH--FS--NPNFELIRHDVVEPI-----L-------  181 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhh--cc--CCceEEEECCccChh-----h-------
Confidence            4588999999999999999999999999999987543222111110  11  112677788886642     1       


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      ..+|.|||+|+...+..                           ......+.+++|+.++.++++++...    + .++|
T Consensus       182 ~~~D~ViHlAa~~~~~~---------------------------~~~~p~~~~~~Nv~gt~nLleaa~~~----g-~r~V  229 (442)
T PLN02206        182 LEVDQIYHLACPASPVH---------------------------YKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFL  229 (442)
T ss_pred             cCCCEEEEeeeecchhh---------------------------hhcCHHHHHHHHHHHHHHHHHHHHHh----C-CEEE
Confidence            15899999998754310                           11123467899999999999988652    2 4899


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCc
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF  244 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i  244 (298)
                      ++||...+..... .. ..+..                        .....+......|+.||.+.+.+++.++..+ ++
T Consensus       230 ~~SS~~VYg~~~~-~p-~~E~~------------------------~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~-g~  282 (442)
T PLN02206        230 LTSTSEVYGDPLQ-HP-QVETY------------------------WGNVNPIGVRSCYDEGKRTAETLTMDYHRGA-NV  282 (442)
T ss_pred             EECChHHhCCCCC-CC-CCccc------------------------cccCCCCCccchHHHHHHHHHHHHHHHHHHh-CC
Confidence            9999654322100 00 00000                        0001122335789999999999998876664 67


Q ss_pred             EEEEeeCCeeecC
Q 022357          245 CVNCVCPGFVKTD  257 (298)
Q Consensus       245 ~vn~v~PG~v~t~  257 (298)
                      ++..+.|+.+..+
T Consensus       283 ~~~ilR~~~vyGp  295 (442)
T PLN02206        283 EVRIARIFNTYGP  295 (442)
T ss_pred             CeEEEEeccccCC
Confidence            7777666655543

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.44  E-value=1.3e-12  Score=118.10  Aligned_cols=164  Identities=16%  Similarity=0.113  Sum_probs=111.4

Q ss_pred             EEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCccE
Q 022357           10 VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDI   89 (298)
Q Consensus        10 lITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~id~   89 (298)
                      |||||+|.||+++++.|+++|+.|+++.+.                       ..+|+++.++++++++..     ++|+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------------~~~Dl~~~~~l~~~~~~~-----~~d~   52 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------------KELDLTRQADVEAFFAKE-----KPTY   52 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------------ccCCCCCHHHHHHHHhcc-----CCCE
Confidence            699999999999999999999998766432                       147999999888877643     6899


Q ss_pred             EEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEccC
Q 022357           90 LANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSY  169 (298)
Q Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~  169 (298)
                      |||+|+......                          ...+...+.+++|+.++..+++++...    +.+++|++||.
T Consensus        53 Vih~A~~~~~~~--------------------------~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~SS~  102 (306)
T PLN02725         53 VILAAAKVGGIH--------------------------ANMTYPADFIRENLQIQTNVIDAAYRH----GVKKLLFLGSS  102 (306)
T ss_pred             EEEeeeeecccc--------------------------hhhhCcHHHHHHHhHHHHHHHHHHHHc----CCCeEEEeCce
Confidence            999998753210                          011122356888999999999998652    34689999996


Q ss_pred             cccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEEEe
Q 022357          170 VSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCV  249 (298)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn~v  249 (298)
                      .-..+. +         ..+. .++               ........+....|+.||.+.+.+++.+..++ ++++..+
T Consensus       103 ~vyg~~-~---------~~~~-~E~---------------~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~  155 (306)
T PLN02725        103 CIYPKF-A---------PQPI-PET---------------ALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQY-GWDAISG  155 (306)
T ss_pred             eecCCC-C---------CCCC-CHH---------------HhccCCCCCCcchHHHHHHHHHHHHHHHHHHh-CCCEEEE
Confidence            532211 0         0000 000               00000111223469999999999998887664 7888888


Q ss_pred             eCCeeecCC
Q 022357          250 CPGFVKTDI  258 (298)
Q Consensus       250 ~PG~v~t~~  258 (298)
                      .|+.+..+.
T Consensus       156 R~~~vyG~~  164 (306)
T PLN02725        156 MPTNLYGPH  164 (306)
T ss_pred             EecceeCCC
Confidence            888887663

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.43  E-value=1.3e-12  Score=115.34  Aligned_cols=187  Identities=18%  Similarity=0.135  Sum_probs=102.4

Q ss_pred             EeCCCCchhHHHHHHHHHCCC--EEEEEecCchh---hHHHHHHHHhcCC-------CCcceeEEEeccCcHH-HH-HHH
Q 022357           11 VTGSNKGIGFETVRQLASKGI--TVVLTARDEKR---GLEAVEKLKASGV-------DPELLLFHQLDISDLA-SV-SSL   76 (298)
Q Consensus        11 ITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~---~~~~~~~~~~~~~-------~~~~~~~~~~Dls~~~-~v-~~~   76 (298)
                      ||||||.||+++..+|++++.  +|+++.|....   .+.+.+.+...+.       ...++.++..|++++. .+ ..-
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  99999998643   1222222221110       1235999999999864 11 111


Q ss_pred             HHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhc
Q 022357           77 ADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE  156 (298)
Q Consensus        77 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~  156 (298)
                      .+.+.+   .+|+|||||+..+...                              ..++..++|+.|+..+++.+..   
T Consensus        81 ~~~L~~---~v~~IiH~Aa~v~~~~------------------------------~~~~~~~~NV~gt~~ll~la~~---  124 (249)
T PF07993_consen   81 YQELAE---EVDVIIHCAASVNFNA------------------------------PYSELRAVNVDGTRNLLRLAAQ---  124 (249)
T ss_dssp             HHHHHH---H--EEEE--SS-SBS-------------------------------S--EEHHHHHHHHHHHHHHHTS---
T ss_pred             hhcccc---ccceeeecchhhhhcc------------------------------cchhhhhhHHHHHHHHHHHHHh---
Confidence            222322   5899999999876542                              2234688999999999998874   


Q ss_pred             cCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHH
Q 022357          157 LSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI  236 (298)
Q Consensus       157 ~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~  236 (298)
                       .+..+++++|| +...+.....       .......              ...............|..||...+.+++.
T Consensus       125 -~~~~~~~~iST-a~v~~~~~~~-------~~~~~~~--------------~~~~~~~~~~~~~~gY~~SK~~aE~~l~~  181 (249)
T PF07993_consen  125 -GKRKRFHYIST-AYVAGSRPGT-------IEEKVYP--------------EEEDDLDPPQGFPNGYEQSKWVAERLLRE  181 (249)
T ss_dssp             -SS---EEEEEE-GGGTTS-TTT---------SSS-H--------------HH--EEE--TTSEE-HHHHHHHHHHHHHH
T ss_pred             -ccCcceEEecc-ccccCCCCCc-------ccccccc--------------cccccchhhccCCccHHHHHHHHHHHHHH
Confidence             22249999999 3332211000       0000000              00000111224456899999999999998


Q ss_pred             HHHhCCCcEEEEeeCCeeecC
Q 022357          237 LAKRYPKFCVNCVCPGFVKTD  257 (298)
Q Consensus       237 la~e~~~i~vn~v~PG~v~t~  257 (298)
                      .+.+ .++.+..+.||.|-.+
T Consensus       182 a~~~-~g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  182 AAQR-HGLPVTIYRPGIIVGD  201 (249)
T ss_dssp             HHHH-H---EEEEEE-EEE-S
T ss_pred             HHhc-CCceEEEEecCccccc
Confidence            8876 4888999999999883

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.42  E-value=4.6e-12  Score=120.50  Aligned_cols=177  Identities=18%  Similarity=0.039  Sum_probs=113.5

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .++|+||||+|.||++++++|+++|++|++++|...........+.  .  ...+.++..|+.+..     +       .
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~--~--~~~~~~~~~Di~~~~-----~-------~  183 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF--G--NPRFELIRHDVVEPI-----L-------L  183 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc--c--CCceEEEECcccccc-----c-------c
Confidence            4689999999999999999999999999999986432111111111  1  113677788886542     1       2


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      .+|+|||+|+...+..                           ......+.+++|+.++.++++++...    + .++|+
T Consensus       184 ~~D~ViHlAa~~~~~~---------------------------~~~~p~~~~~~Nv~gT~nLleaa~~~----g-~r~V~  231 (436)
T PLN02166        184 EVDQIYHLACPASPVH---------------------------YKYNPVKTIKTNVMGTLNMLGLAKRV----G-ARFLL  231 (436)
T ss_pred             CCCEEEECceeccchh---------------------------hccCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEE
Confidence            5899999998754320                           01123467899999999999988653    2 48999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcE
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC  245 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~  245 (298)
                      +||.........        .  +...                .......+......|+.+|.+.+.+++.++..+ ++.
T Consensus       232 ~SS~~VYg~~~~--------~--p~~E----------------~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~-~l~  284 (436)
T PLN02166        232 TSTSEVYGDPLE--------H--PQKE----------------TYWGNVNPIGERSCYDEGKRTAETLAMDYHRGA-GVE  284 (436)
T ss_pred             ECcHHHhCCCCC--------C--CCCc----------------cccccCCCCCCCCchHHHHHHHHHHHHHHHHHh-CCC
Confidence            999653321100        0  0000                000001122335679999999999999887764 677


Q ss_pred             EEEeeCCeeecC
Q 022357          246 VNCVCPGFVKTD  257 (298)
Q Consensus       246 vn~v~PG~v~t~  257 (298)
                      +..+.|+.+..+
T Consensus       285 ~~ilR~~~vYGp  296 (436)
T PLN02166        285 VRIARIFNTYGP  296 (436)
T ss_pred             eEEEEEccccCC
Confidence            766666655554

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.37  E-value=7.9e-12  Score=112.64  Aligned_cols=154  Identities=23%  Similarity=0.231  Sum_probs=103.8

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      +++|||||+|.||.++++.|.++|++|+.++|.                        .+|+++.+++.++++..     +
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------------~~dl~d~~~~~~~~~~~-----~   51 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS------------------------DLDLTDPEAVAKLLEAF-----K   51 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------------CS-TTSHHHHHHHHHHH------
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------------hcCCCCHHHHHHHHHHh-----C
Confidence            379999999999999999999999999999776                        57999999999998776     7


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+|||+|+...+.                           ......+..+.+|+.++..|.+.+..     .+.++|++
T Consensus        52 pd~Vin~aa~~~~~---------------------------~ce~~p~~a~~iN~~~~~~la~~~~~-----~~~~li~~   99 (286)
T PF04321_consen   52 PDVVINCAAYTNVD---------------------------ACEKNPEEAYAINVDATKNLAEACKE-----RGARLIHI   99 (286)
T ss_dssp             -SEEEE------HH---------------------------HHHHSHHHHHHHHTHHHHHHHHHHHH-----CT-EEEEE
T ss_pred             CCeEeccceeecHH---------------------------hhhhChhhhHHHhhHHHHHHHHHHHH-----cCCcEEEe
Confidence            99999999986432                           23344567799999999999999875     24699999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      ||..-..+.-                               .+...+...+.....|+-+|...+..++...   +  +.
T Consensus       100 STd~VFdG~~-------------------------------~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~---~--~~  143 (286)
T PF04321_consen  100 STDYVFDGDK-------------------------------GGPYTEDDPPNPLNVYGRSKLEGEQAVRAAC---P--NA  143 (286)
T ss_dssp             EEGGGS-SST-------------------------------SSSB-TTS----SSHHHHHHHHHHHHHHHH----S--SE
T ss_pred             eccEEEcCCc-------------------------------ccccccCCCCCCCCHHHHHHHHHHHHHHHhc---C--CE
Confidence            9965443320                               0012223334557899999999998887622   2  44


Q ss_pred             EEeeCCeeecC
Q 022357          247 NCVCPGFVKTD  257 (298)
Q Consensus       247 n~v~PG~v~t~  257 (298)
                      ..+.++++..+
T Consensus       144 ~IlR~~~~~g~  154 (286)
T PF04321_consen  144 LILRTSWVYGP  154 (286)
T ss_dssp             EEEEE-SEESS
T ss_pred             EEEecceeccc
Confidence            55555665554

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.35  E-value=3.3e-11  Score=110.02  Aligned_cols=111  Identities=16%  Similarity=0.110  Sum_probs=83.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +++||||||.||++++++|+++|++|++++|+.++...    +...     .+.++.+|+++.+++.++++       .+
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~~-----~v~~v~~Dl~d~~~l~~al~-------g~   65 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKEW-----GAELVYGDLSLPETLPPSFK-------GV   65 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhhc-----CCEEEECCCCCHHHHHHHHC-------CC
Confidence            69999999999999999999999999999998654321    2211     17889999999998877765       68


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+|||+++....                                ......++|+.++.++++++..    .+..++|++|
T Consensus        66 d~Vi~~~~~~~~--------------------------------~~~~~~~~~~~~~~~l~~aa~~----~gvkr~I~~S  109 (317)
T CHL00194         66 TAIIDASTSRPS--------------------------------DLYNAKQIDWDGKLALIEAAKA----AKIKRFIFFS  109 (317)
T ss_pred             CEEEECCCCCCC--------------------------------CccchhhhhHHHHHHHHHHHHH----cCCCEEEEec
Confidence            999998763211                                0112456788888888887754    3446999999


Q ss_pred             cCc
Q 022357          168 SYV  170 (298)
Q Consensus       168 S~~  170 (298)
                      |..
T Consensus       110 s~~  112 (317)
T CHL00194        110 ILN  112 (317)
T ss_pred             ccc
Confidence            853

>PLN02996 fatty acyl-CoA reductase

Probab=99.34  E-value=4e-11  Score=115.73  Aligned_cols=129  Identities=16%  Similarity=0.085  Sum_probs=87.8

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCC---CEEEEEecCchh--hHHHH-HHH---------HhcCCC------CcceeE
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKG---ITVVLTARDEKR--GLEAV-EKL---------KASGVD------PELLLF   62 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G---~~Vii~~r~~~~--~~~~~-~~~---------~~~~~~------~~~~~~   62 (298)
                      +++|+++||||||.||+.++.+|++.+   .+|+++.|....  ..+.+ .++         ....+.      ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            578999999999999999999999864   368888887542  11111 111         110000      134899


Q ss_pred             EEeccCcH-------HHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHh
Q 022357           63 HQLDISDL-------ASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVE  135 (298)
Q Consensus        63 ~~~Dls~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (298)
                      +..|++.+       +.++.+++       .+|+|||+|+.....                              +....
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~------------------------------~~~~~  131 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFD------------------------------ERYDV  131 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCc------------------------------CCHHH
Confidence            99999843       33444443       689999999976421                              12346


Q ss_pred             hhhhhceeHHHHHHHHhhhhccCCCCcEEEEccCccc
Q 022357          136 CLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSA  172 (298)
Q Consensus       136 ~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~  172 (298)
                      .+.+|+.|+..+++++...   .+-.++|++||....
T Consensus       132 ~~~~Nv~gt~~ll~~a~~~---~~~k~~V~vST~~vy  165 (491)
T PLN02996        132 ALGINTLGALNVLNFAKKC---VKVKMLLHVSTAYVC  165 (491)
T ss_pred             HHHHHHHHHHHHHHHHHhc---CCCCeEEEEeeeEEe
Confidence            7899999999999988652   123589999987654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.32  E-value=5.1e-11  Score=119.01  Aligned_cols=176  Identities=18%  Similarity=0.088  Sum_probs=113.5

Q ss_pred             EEEEeCCCCchhHHHHHHHH--HCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHH--HHHHHHHHHHh
Q 022357            8 YAVVTGSNKGIGFETVRQLA--SKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLAS--VSSLADFIKTQ   83 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La--~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~--v~~~~~~~~~~   83 (298)
                      ++|||||||.||++++++|+  ++|++|++++|+...  .....+..... ..++.++.+|+++.+.  .....+.+   
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~--~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~l---   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL--SRLEALAAYWG-ADRVVPLVGDLTEPGLGLSEADIAEL---   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH--HHHHHHHHhcC-CCcEEEEecccCCccCCcCHHHHHHh---
Confidence            69999999999999999999  579999999996532  11122211111 1238889999998531  01112222   


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                       ..+|+|||+|+.....                              ....+..++|+.++..+++++..    .+..++
T Consensus        76 -~~~D~Vih~Aa~~~~~------------------------------~~~~~~~~~nv~gt~~ll~~a~~----~~~~~~  120 (657)
T PRK07201         76 -GDIDHVVHLAAIYDLT------------------------------ADEEAQRAANVDGTRNVVELAER----LQAATF  120 (657)
T ss_pred             -cCCCEEEECceeecCC------------------------------CCHHHHHHHHhHHHHHHHHHHHh----cCCCeE
Confidence             3789999999975321                              01134568899999998888754    234699


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      |++||.........           .....+                .  .........|+.||.+.+.+++.    ..+
T Consensus       121 v~~SS~~v~g~~~~-----------~~~e~~----------------~--~~~~~~~~~Y~~sK~~~E~~~~~----~~g  167 (657)
T PRK07201        121 HHVSSIAVAGDYEG-----------VFREDD----------------F--DEGQGLPTPYHRTKFEAEKLVRE----ECG  167 (657)
T ss_pred             EEEeccccccCccC-----------cccccc----------------c--hhhcCCCCchHHHHHHHHHHHHH----cCC
Confidence            99999765421100           000000                0  00012235799999999988763    358


Q ss_pred             cEEEEeeCCeeecC
Q 022357          244 FCVNCVCPGFVKTD  257 (298)
Q Consensus       244 i~vn~v~PG~v~t~  257 (298)
                      +.+..+.|+.|..+
T Consensus       168 ~~~~ilRp~~v~G~  181 (657)
T PRK07201        168 LPWRVYRPAVVVGD  181 (657)
T ss_pred             CcEEEEcCCeeeec
Confidence            88999999988764

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.30  E-value=1.1e-10  Score=106.24  Aligned_cols=185  Identities=17%  Similarity=0.173  Sum_probs=120.8

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhc--------CCCCcceeEEEeccCcHH------
Q 022357            7 KYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKAS--------GVDPELLLFHQLDISDLA------   71 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~--------~~~~~~~~~~~~Dls~~~------   71 (298)
                      +++++|||||.+|+.++++|+.+ .++|+...|-... +...+++++.        .....++.++..|++.++      
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~-E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~   79 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSD-EAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER   79 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCH-HHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence            57999999999999999999986 4599999986542 2222333221        123346999999999443      


Q ss_pred             HHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHH
Q 022357           72 SVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEAL  151 (298)
Q Consensus        72 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~  151 (298)
                      ..+.+.       ..+|.+||||+....-                              ...++....|+.|+..+++.+
T Consensus        80 ~~~~La-------~~vD~I~H~gA~Vn~v------------------------------~pYs~L~~~NVlGT~evlrLa  122 (382)
T COG3320          80 TWQELA-------ENVDLIIHNAALVNHV------------------------------FPYSELRGANVLGTAEVLRLA  122 (382)
T ss_pred             HHHHHh-------hhcceEEecchhhccc------------------------------CcHHHhcCcchHhHHHHHHHH
Confidence            222332       2689999999876532                              122356788999999988887


Q ss_pred             hhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHH
Q 022357          152 IPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVIN  231 (298)
Q Consensus       152 ~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~  231 (298)
                      .-    .+...+.++||++..-....   +....+..     .              .......+-.....|+-||.+.+
T Consensus       123 ~~----gk~Kp~~yVSsisv~~~~~~---~~~~~~~~-----~--------------~~~~~~~~~~~~~GY~~SKwvaE  176 (382)
T COG3320         123 AT----GKPKPLHYVSSISVGETEYY---SNFTVDFD-----E--------------ISPTRNVGQGLAGGYGRSKWVAE  176 (382)
T ss_pred             hc----CCCceeEEEeeeeecccccc---CCCccccc-----c--------------ccccccccCccCCCcchhHHHHH
Confidence            54    23345999999775432210   00000000     0              00000111133577999999999


Q ss_pred             HHHHHHHHhCCCcEEEEeeCCeeecC
Q 022357          232 AYTRILAKRYPKFCVNCVCPGFVKTD  257 (298)
Q Consensus       232 ~l~~~la~e~~~i~vn~v~PG~v~t~  257 (298)
                      .+++.....  |.++..+.||+|..+
T Consensus       177 ~Lvr~A~~r--GLpv~I~Rpg~I~gd  200 (382)
T COG3320         177 KLVREAGDR--GLPVTIFRPGYITGD  200 (382)
T ss_pred             HHHHHHhhc--CCCeEEEecCeeecc
Confidence            999876555  999999999999765

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.29  E-value=1.6e-11  Score=108.76  Aligned_cols=136  Identities=24%  Similarity=0.251  Sum_probs=107.2

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCcc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~id   88 (298)
                      +||||++|.+|.++++.|. .++.|+.++|..                        +|++|.+.+.+++.+.     ++|
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~------------------------~Ditd~~~v~~~i~~~-----~PD   52 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE------------------------LDITDPDAVLEVIRET-----RPD   52 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc------------------------ccccChHHHHHHHHhh-----CCC
Confidence            9999999999999999999 778999988763                        7999999999999877     899


Q ss_pred             EEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEcc
Q 022357           89 ILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  168 (298)
Q Consensus        89 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  168 (298)
                      +|||+|++....                           ....+.+..+.+|..|+.++.+++...     +..+|++|+
T Consensus        53 vVIn~AAyt~vD---------------------------~aE~~~e~A~~vNa~~~~~lA~aa~~~-----ga~lVhiST  100 (281)
T COG1091          53 VVINAAAYTAVD---------------------------KAESEPELAFAVNATGAENLARAAAEV-----GARLVHIST  100 (281)
T ss_pred             EEEECccccccc---------------------------cccCCHHHHHHhHHHHHHHHHHHHHHh-----CCeEEEeec
Confidence            999999987542                           233334677999999999999998653     468999999


Q ss_pred             CcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhh-hhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          169 YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG-EIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                      -.-..+.                                ++ .-.+.-.+.....|+.||.+-+..++...
T Consensus       101 DyVFDG~--------------------------------~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~  139 (281)
T COG1091         101 DYVFDGE--------------------------------KGGPYKETDTPNPLNVYGRSKLAGEEAVRAAG  139 (281)
T ss_pred             ceEecCC--------------------------------CCCCCCCCCCCCChhhhhHHHHHHHHHHHHhC
Confidence            6544332                                21 12223334557899999999999887665

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.27  E-value=5.9e-11  Score=108.68  Aligned_cols=184  Identities=17%  Similarity=0.097  Sum_probs=127.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++.+++||||+|.+|++++.+|.+++  .+|.+.+..+.......+....   ....+..+++|+.+..++..+++    
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~---~~~~v~~~~~D~~~~~~i~~a~~----   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF---RSGRVTVILGDLLDANSISNAFQ----   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc---cCCceeEEecchhhhhhhhhhcc----
Confidence            46799999999999999999999998  7888998876422222122111   22348999999999999888876    


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                         .. .+||+|....+..                           -..+.+..+++|+.|+-+++.++...    ...+
T Consensus        76 ---~~-~Vvh~aa~~~~~~---------------------------~~~~~~~~~~vNV~gT~nvi~~c~~~----~v~~  120 (361)
T KOG1430|consen   76 ---GA-VVVHCAASPVPDF---------------------------VENDRDLAMRVNVNGTLNVIEACKEL----GVKR  120 (361)
T ss_pred             ---Cc-eEEEeccccCccc---------------------------cccchhhheeecchhHHHHHHHHHHh----CCCE
Confidence               55 6677766543321                           11234567999999999999888763    5579


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      +|++||..-..+..+     +.+..                       .....+......|+.||+--+.+++..... .
T Consensus       121 lIYtSs~~Vvf~g~~-----~~n~~-----------------------E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~~-~  171 (361)
T KOG1430|consen  121 LIYTSSAYVVFGGEP-----IINGD-----------------------ESLPYPLKHIDPYGESKALAEKLVLEANGS-D  171 (361)
T ss_pred             EEEecCceEEeCCee-----cccCC-----------------------CCCCCccccccccchHHHHHHHHHHHhcCC-C
Confidence            999999887765422     11111                       111122244568999999999998876652 3


Q ss_pred             CcEEEEeeCCeeecCCC
Q 022357          243 KFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~  259 (298)
                      +....++.|-.|..|..
T Consensus       172 ~l~T~aLR~~~IYGpgd  188 (361)
T KOG1430|consen  172 DLYTCALRPPGIYGPGD  188 (361)
T ss_pred             CeeEEEEccccccCCCC
Confidence            56777888888877754

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.26  E-value=3.4e-10  Score=94.71  Aligned_cols=151  Identities=19%  Similarity=0.167  Sum_probs=107.4

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCcc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~id   88 (298)
                      |+|+||||.+|+.++++|+++|++|+++.|++++...        .   ..+.++++|+.+.+++.++++       ..|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~---~~~~~~~~d~~d~~~~~~al~-------~~d   62 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------S---PGVEIIQGDLFDPDSVKAALK-------GAD   62 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------C---TTEEEEESCTTCHHHHHHHHT-------TSS
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------c---cccccceeeehhhhhhhhhhh-------hcc
Confidence            6899999999999999999999999999999886555        1   129999999999988888775       789


Q ss_pred             EEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEcc
Q 022357           89 ILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS  168 (298)
Q Consensus        89 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS  168 (298)
                      .+|+++|...                              .          +    ...++.++..+++.+..++|++||
T Consensus        63 ~vi~~~~~~~------------------------------~----------~----~~~~~~~~~a~~~~~~~~~v~~s~   98 (183)
T PF13460_consen   63 AVIHAAGPPP------------------------------K----------D----VDAAKNIIEAAKKAGVKRVVYLSS   98 (183)
T ss_dssp             EEEECCHSTT------------------------------T----------H----HHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred             hhhhhhhhhc------------------------------c----------c----ccccccccccccccccccceeeec
Confidence            9999997531                              0          0    344555666666666679999999


Q ss_pred             CcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEEE
Q 022357          169 YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNC  248 (298)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn~  248 (298)
                      ..........                                ... ...+....|...|...+.+.+    + .+++...
T Consensus        99 ~~~~~~~~~~--------------------------------~~~-~~~~~~~~~~~~~~~~e~~~~----~-~~~~~~i  140 (183)
T PF13460_consen   99 AGVYRDPPGL--------------------------------FSD-EDKPIFPEYARDKREAEEALR----E-SGLNWTI  140 (183)
T ss_dssp             TTGTTTCTSE--------------------------------EEG-GTCGGGHHHHHHHHHHHHHHH----H-STSEEEE
T ss_pred             cccCCCCCcc--------------------------------ccc-ccccchhhhHHHHHHHHHHHH----h-cCCCEEE
Confidence            7654322100                                000 000112356666766554442    2 4889999


Q ss_pred             eeCCeeecCCC
Q 022357          249 VCPGFVKTDIN  259 (298)
Q Consensus       249 v~PG~v~t~~~  259 (298)
                      +.||++..+..
T Consensus       141 vrp~~~~~~~~  151 (183)
T PF13460_consen  141 VRPGWIYGNPS  151 (183)
T ss_dssp             EEESEEEBTTS
T ss_pred             EECcEeEeCCC
Confidence            99999988753

...

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.26  E-value=3.4e-11  Score=105.00  Aligned_cols=184  Identities=19%  Similarity=0.088  Sum_probs=134.4

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH-HHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE-AVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +|++||||-||.-|.-+++.|++.|+.|+.+.|.....+- ...-.+.......+++...+|++|..++.++++.+    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            6899999999999999999999999999999987443211 11212222223334889999999999999999887    


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       .+|-+.|.|+.+..+                           ++.+....+.+++..|+.+|+.++.-+=  .+.-|+.
T Consensus        78 -~PdEIYNLaAQS~V~---------------------------vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfY  127 (345)
T COG1089          78 -QPDEIYNLAAQSHVG---------------------------VSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFY  127 (345)
T ss_pred             -Cchhheecccccccc---------------------------ccccCcceeeeechhHHHHHHHHHHHhC--CcccEEE
Confidence             899999999876554                           4556666788999999999999986542  2234666


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC---
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY---  241 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~---  241 (298)
                      ..||+.-. +..                              ..-...+..++...+.|+++|.-...++...+-.|   
T Consensus       128 QAStSE~f-G~v------------------------------~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~  176 (345)
T COG1089         128 QASTSELY-GLV------------------------------QEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLF  176 (345)
T ss_pred             ecccHHhh-cCc------------------------------ccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCce
Confidence            66663311 110                              01123456778889999999999999998888877   


Q ss_pred             --CCcEEEEeeCCee
Q 022357          242 --PKFCVNCVCPGFV  254 (298)
Q Consensus       242 --~~i~vn~v~PG~v  254 (298)
                        .||-+|.=+|.-=
T Consensus       177 AcnGILFNHESP~Rg  191 (345)
T COG1089         177 ACNGILFNHESPLRG  191 (345)
T ss_pred             eecceeecCCCCCCc
Confidence              4788887777643

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.25  E-value=2.2e-10  Score=102.32  Aligned_cols=182  Identities=16%  Similarity=0.169  Sum_probs=134.9

Q ss_pred             CcEEEEeCC-CCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KKYAVVTGS-NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGa-s~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ..+|||.|. +.-|++.+|..|-++|+-|++++.+.++.+...++-   ..+   +..+..|..+..++...+..+.+..
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~d---I~~L~ld~~~~~~~~~~l~~f~~~L   76 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPD---IRPLWLDDSDPSSIHASLSRFASLL   76 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCC---CCCcccCCCCCcchHHHHHHHHHHh
Confidence            468899995 899999999999999999999999876533332221   122   7788888877777666666665543


Q ss_pred             C--------------CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHH
Q 022357           85 G--------------KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEA  150 (298)
Q Consensus        85 g--------------~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~  150 (298)
                      .              .+..||.......+.                      .+++..+.+.|...++.|+..++.+++.
T Consensus        77 ~~p~~p~~~~~~h~l~L~svi~~Psl~yp~----------------------gPie~i~~s~~~~~ln~~ll~~~~~~q~  134 (299)
T PF08643_consen   77 SRPHVPFPGAPPHHLQLKSVIFIPSLSYPT----------------------GPIETISPSSWADELNTRLLTPILTIQG  134 (299)
T ss_pred             cCCCCCCCCCCCceeEEEEEEEecCCCCCC----------------------CCccccCHHHHHHHHHHHHHHHHHHHHH
Confidence            2              234455444433222                      2344578899999999999999999999


Q ss_pred             HhhhhccC--CCCcEEEEc-cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHH
Q 022357          151 LIPLLELS--DSPRLVNLS-SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSK  227 (298)
Q Consensus       151 ~~~~~~~~--~~g~iv~vs-S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  227 (298)
                      ++|+|+.+  +..+||+++ |+.....                                          ++.++...+..
T Consensus       135 lLPlL~~~~~~~~~iil~~Psi~ssl~------------------------------------------~PfhspE~~~~  172 (299)
T PF08643_consen  135 LLPLLRSRSNQKSKIILFNPSISSSLN------------------------------------------PPFHSPESIVS  172 (299)
T ss_pred             HHHHHHhccCCCceEEEEeCchhhccC------------------------------------------CCccCHHHHHH
Confidence            99999872  245666555 4433332                                          37788999999


Q ss_pred             HHHHHHHHHHHHhC--CCcEEEEeeCCeeecC
Q 022357          228 AVINAYTRILAKRY--PKFCVNCVCPGFVKTD  257 (298)
Q Consensus       228 ~al~~l~~~la~e~--~~i~vn~v~PG~v~t~  257 (298)
                      .|+.+|++.|++|+  .+|.|..|..|.++-.
T Consensus       173 ~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  173 SALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             HHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            99999999999999  3899999999988765

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.24  E-value=6.5e-10  Score=108.97  Aligned_cols=210  Identities=11%  Similarity=0.096  Sum_probs=125.7

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC---EEEEEecCchh--hHHHH-HHH---------HhcCC------CCcceeE
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI---TVVLTARDEKR--GLEAV-EKL---------KASGV------DPELLLF   62 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~---~Vii~~r~~~~--~~~~~-~~~---------~~~~~------~~~~~~~   62 (298)
                      +.+|+++||||||.||+.++.+|++.+.   +|+++.|....  ..+.+ .++         ++..+      ...++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            5789999999999999999999998654   67888886432  22222 121         11111      1235899


Q ss_pred             EEeccCcHH------HHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhh
Q 022357           63 HQLDISDLA------SVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVEC  136 (298)
Q Consensus        63 ~~~Dls~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (298)
                      +..|+++++      ..+.+.+       .+|+|||+|+.....                              +..+..
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f~------------------------------~~~~~a  239 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTFD------------------------------ERYDVA  239 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECccccccc------------------------------cCHHHH
Confidence            999999873      3333322       589999999876421                              234567


Q ss_pred             hhhhceeHHHHHHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhc--c---------------CcCCCHHHHHHHH
Q 022357          137 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG--D---------------VENLTEERIEMVV  199 (298)
Q Consensus       137 ~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~--~---------------~~~~~~~~~~~~~  199 (298)
                      +++|+.|+.++++.+...   .+..++|++||.......-..-.-+.+.  +               ...+.++....+.
T Consensus       240 ~~vNV~GT~nLLelA~~~---~~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~  316 (605)
T PLN02503        240 IDINTRGPCHLMSFAKKC---KKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLA  316 (605)
T ss_pred             HHHHHHHHHHHHHHHHHc---CCCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHH
Confidence            899999999999988653   1224789988865432210000000111  0               0223444444443


Q ss_pred             HHHHH-hhh----hhh-----hhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEEEeeCCeeec
Q 022357          200 KDYFK-DYE----EGE-----IANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKT  256 (298)
Q Consensus       200 ~~~~~-~~~----~~~-----~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn~v~PG~v~t  256 (298)
                      .+... ...    ...     +.......+-..|.-+|+..+.+++..+   .++.+..|.|+.|.+
T Consensus       317 ~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~~~---~~LPv~IvRPsiV~s  380 (605)
T PLN02503        317 LDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSMR---GDIPVVIIRPSVIES  380 (605)
T ss_pred             HHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHHHhc---CCCCEEEEcCCEecc
Confidence            22222 000    001     0111122445789999999999997443   467788888888854

>PRK05865 hypothetical protein; Provisional

Probab=99.22  E-value=2.1e-10  Score=115.94  Aligned_cols=102  Identities=27%  Similarity=0.238  Sum_probs=81.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +++||||+|+||++++++|+++|++|++++|+....      ..   .   .+.++.+|+++.+++.++++       .+
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~~---~---~v~~v~gDL~D~~~l~~al~-------~v   62 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------WP---S---SADFIAADIRDATAVESAMT-------GA   62 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------cc---c---CceEEEeeCCCHHHHHHHHh-------CC
Confidence            699999999999999999999999999999975321      10   1   27788999999999887775       58


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+|||+|+....                                    .+++|+.++.++++++..    .+.+++|++|
T Consensus        63 D~VVHlAa~~~~------------------------------------~~~vNv~GT~nLLeAa~~----~gvkr~V~iS  102 (854)
T PRK05865         63 DVVAHCAWVRGR------------------------------------NDHINIDGTANVLKAMAE----TGTGRIVFTS  102 (854)
T ss_pred             CEEEECCCcccc------------------------------------hHHHHHHHHHHHHHHHHH----cCCCeEEEEC
Confidence            999999975321                                    257899998888776643    4457999999


Q ss_pred             c
Q 022357          168 S  168 (298)
Q Consensus       168 S  168 (298)
                      |
T Consensus       103 S  103 (854)
T PRK05865        103 S  103 (854)
T ss_pred             C
Confidence            9

>PLN02778 3,5-epimerase/4-reductase

Probab=99.20  E-value=3.6e-10  Score=102.41  Aligned_cols=151  Identities=19%  Similarity=0.111  Sum_probs=93.3

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .+++|||||+|.||+++++.|+++|++|+...                           .|+.+.+.+...++..     
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~---------------------------~~~~~~~~v~~~l~~~-----   56 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS---------------------------GRLENRASLEADIDAV-----   56 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec---------------------------CccCCHHHHHHHHHhc-----
Confidence            46899999999999999999999999987432                           1234444444444322     


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|+|||+||.......                  .      ...+...+.+++|+.++.++++++...    +. +.++
T Consensus        57 ~~D~ViH~Aa~~~~~~~------------------~------~~~~~p~~~~~~Nv~gt~~ll~aa~~~----gv-~~v~  107 (298)
T PLN02778         57 KPTHVFNAAGVTGRPNV------------------D------WCESHKVETIRANVVGTLTLADVCRER----GL-VLTN  107 (298)
T ss_pred             CCCEEEECCcccCCCCc------------------h------hhhhCHHHHHHHHHHHHHHHHHHHHHh----CC-CEEE
Confidence            68999999997643200                  0      012334567899999999999998653    22 3455


Q ss_pred             EccCcccccC--CchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhh-hhhcCC-CCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          166 LSSYVSALKD--LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG-EIANRG-WCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       166 vsS~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||.......  .+.                            .++ .+.+.. +.+..+.|+.||.+.+.+++.++..+
T Consensus       108 ~sS~~vy~~~~~~p~----------------------------~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~~~  159 (298)
T PLN02778        108 YATGCIFEYDDAHPL----------------------------GSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVC  159 (298)
T ss_pred             EecceEeCCCCCCCc----------------------------ccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhccE
Confidence            5543221110  000                            000 011111 11234689999999999998876433


Q ss_pred             CCcEE
Q 022357          242 PKFCV  246 (298)
Q Consensus       242 ~~i~v  246 (298)
                       ++|+
T Consensus       160 -~lr~  163 (298)
T PLN02778        160 -TLRV  163 (298)
T ss_pred             -Eeee
Confidence             4444

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.12  E-value=1.3e-08  Score=82.16  Aligned_cols=176  Identities=16%  Similarity=0.105  Sum_probs=114.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .++|+|-||-|.+|++++..|-++++-|.-++-.+.+-.           +  .-..+..|-+=.++-+.+.+++.+..+
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----------d--~sI~V~~~~swtEQe~~v~~~vg~sL~   69 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----------D--SSILVDGNKSWTEQEQSVLEQVGSSLQ   69 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----------c--ceEEecCCcchhHHHHHHHHHHHHhhc
Confidence            367999999999999999999999999987776543200           0  133444444444666667777766543


Q ss_pred             --CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           86 --KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        86 --~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        ++|.++|-||--.-...                  .-+++    ....+-++.-.+...-...+..-.+++  . |-+
T Consensus        70 gekvDav~CVAGGWAGGnA------------------ksKdl----~KNaDLMwKQSvwtSaIsa~lAt~HLK--~-GGL  124 (236)
T KOG4022|consen   70 GEKVDAVFCVAGGWAGGNA------------------KSKDL----VKNADLMWKQSVWTSAISAKLATTHLK--P-GGL  124 (236)
T ss_pred             ccccceEEEeeccccCCCc------------------chhhh----hhchhhHHHHHHHHHHHHHHHHHhccC--C-Cce
Confidence              79999999975432210                  00111    122233333334333333444444542  2 444


Q ss_pred             EEEcc-CcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          164 VNLSS-YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       164 v~vsS-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      +-++. -.+..+.                                          |++..|+++|+|++.++++|+.+. 
T Consensus       125 L~LtGAkaAl~gT------------------------------------------PgMIGYGMAKaAVHqLt~SLaak~S  162 (236)
T KOG4022|consen  125 LQLTGAKAALGGT------------------------------------------PGMIGYGMAKAAVHQLTSSLAAKDS  162 (236)
T ss_pred             eeecccccccCCC------------------------------------------CcccchhHHHHHHHHHHHHhccccc
Confidence            44444 3333222                                          788999999999999999999997 


Q ss_pred             ---CCcEEEEeeCCeeecCCCCC
Q 022357          242 ---PKFCVNCVCPGFVKTDINFH  261 (298)
Q Consensus       242 ---~~i~vn~v~PG~v~t~~~~~  261 (298)
                         +|-.+..|-|-..+|||++.
T Consensus       163 GlP~gsaa~~ilPVTLDTPMNRK  185 (236)
T KOG4022|consen  163 GLPDGSAALTILPVTLDTPMNRK  185 (236)
T ss_pred             CCCCCceeEEEeeeeccCccccc
Confidence               36678899999999999865

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.06  E-value=4e-09  Score=105.81  Aligned_cols=157  Identities=16%  Similarity=0.057  Sum_probs=100.7

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .+++|||||+|.||+++++.|.++|++|...                           ..|++|.+.+.+++...     
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~---------------------------~~~l~d~~~v~~~i~~~-----  427 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG---------------------------KGRLEDRSSLLADIRNV-----  427 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEee---------------------------ccccccHHHHHHHHHhh-----
Confidence            3579999999999999999999999887311                           13577777777766543     


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|+|||+|+.......                        +...+...+.+++|+.++.++++++...    + .+.++
T Consensus       428 ~pd~Vih~Aa~~~~~~~------------------------~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g-~~~v~  478 (668)
T PLN02260        428 KPTHVFNAAGVTGRPNV------------------------DWCESHKVETIRANVVGTLTLADVCREN----G-LLMMN  478 (668)
T ss_pred             CCCEEEECCcccCCCCC------------------------ChHHhCHHHHHHHHhHHHHHHHHHHHHc----C-CeEEE
Confidence            78999999997642100                        0122344577899999999999999753    2 35666


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhh-hhhcCCCC-CCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG-EIANRGWC-PHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      +||......... .+                         ...+ ...+...+ +....|+.||.+.+.+++.++ ....
T Consensus       479 ~Ss~~v~~~~~~-~~-------------------------~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~-~~~~  531 (668)
T PLN02260        479 FATGCIFEYDAK-HP-------------------------EGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYD-NVCT  531 (668)
T ss_pred             EcccceecCCcc-cc-------------------------cccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhh-hheE
Confidence            666332211000 00                         0000 01111111 234789999999999998774 3346


Q ss_pred             cEEEEee
Q 022357          244 FCVNCVC  250 (298)
Q Consensus       244 i~vn~v~  250 (298)
                      +|+..+.
T Consensus       532 ~r~~~~~  538 (668)
T PLN02260        532 LRVRMPI  538 (668)
T ss_pred             EEEEEec
Confidence            6766665

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.05  E-value=2.1e-09  Score=89.94  Aligned_cols=85  Identities=20%  Similarity=0.136  Sum_probs=70.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +++||||| |+|.+++++|+++|++|++++|++++.......+.. .   ..+.++++|++|.++++++++.+.+.++++
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~---~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i   76 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-P---ESITPLPLDYHDDDALKLAIKSTIEKNGPF   76 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-C---CcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            69999998 677779999999999999999998766655544432 1   238889999999999999999999989999


Q ss_pred             cEEEEccccC
Q 022357           88 DILANNAGIA   97 (298)
Q Consensus        88 d~lv~nAg~~   97 (298)
                      |.+|+..-..
T Consensus        77 d~lv~~vh~~   86 (177)
T PRK08309         77 DLAVAWIHSS   86 (177)
T ss_pred             eEEEEecccc
Confidence            9999887643

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.04  E-value=3.1e-09  Score=95.16  Aligned_cols=99  Identities=19%  Similarity=0.119  Sum_probs=66.0

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCcc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~id   88 (298)
                      +|||||+|.||++++++|+++|++|++++|+........    .       ..  ..|+.. ...       .+....+|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-------~~--~~~~~~-~~~-------~~~~~~~D   59 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----W-------EG--YKPWAP-LAE-------SEALEGAD   59 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----c-------ee--eecccc-cch-------hhhcCCCC
Confidence            689999999999999999999999999999876532211    0       01  112221 111       12234799


Q ss_pred             EEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhh
Q 022357           89 ILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP  153 (298)
Q Consensus        89 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  153 (298)
                      +|||+||......                   .      ...+...+.+++|+.++..+++++..
T Consensus        60 ~Vvh~a~~~~~~~-------------------~------~~~~~~~~~~~~n~~~~~~l~~a~~~   99 (292)
T TIGR01777        60 AVINLAGEPIADK-------------------R------WTEERKQEIRDSRIDTTRALVEAIAA   99 (292)
T ss_pred             EEEECCCCCcccc-------------------c------CCHHHHHHHHhcccHHHHHHHHHHHh
Confidence            9999999653210                   0      12233446678999999888888864

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.04  E-value=4.8e-09  Score=94.12  Aligned_cols=76  Identities=11%  Similarity=0.035  Sum_probs=60.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC-
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK-   86 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~-   86 (298)
                      +++||||||.||++++++|+++|++|.++.|++++..       ..     .+..+.+|+.|.+++..+++.. +.... 
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-------~~-----~~~~~~~d~~d~~~l~~a~~~~-~~~~g~   67 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-------GP-----NEKHVKFDWLDEDTWDNPFSSD-DGMEPE   67 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-------CC-----CCccccccCCCHHHHHHHHhcc-cCcCCc
Confidence            3899999999999999999999999999999986431       11     1556788999999998887543 22234 


Q ss_pred             ccEEEEcccc
Q 022357           87 LDILANNAGI   96 (298)
Q Consensus        87 id~lv~nAg~   96 (298)
                      +|.++++++.
T Consensus        68 ~d~v~~~~~~   77 (285)
T TIGR03649        68 ISAVYLVAPP   77 (285)
T ss_pred             eeEEEEeCCC
Confidence            8999998763

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.04  E-value=7.1e-09  Score=111.88  Aligned_cols=193  Identities=16%  Similarity=0.103  Sum_probs=117.5

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCC----CEEEEEecCchhhHH---HHHHHHhcCC----CCcceeEEEeccCcHHHH-
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKG----ITVVLTARDEKRGLE---AVEKLKASGV----DPELLLFHQLDISDLASV-   73 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G----~~Vii~~r~~~~~~~---~~~~~~~~~~----~~~~~~~~~~Dls~~~~v-   73 (298)
                      .++++||||+|.||.+++.+|++++    ++|+.+.|+......   ....+...+.    ...++.++..|++++.-- 
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            4789999999999999999999987    789999997543221   1111221111    012488899999855200 


Q ss_pred             -HHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHh
Q 022357           74 -SSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALI  152 (298)
Q Consensus        74 -~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~  152 (298)
                       ....+.+.   ..+|++||||+.....                           .+   .......|+.|+..+++.+.
T Consensus      1051 ~~~~~~~l~---~~~d~iiH~Aa~~~~~---------------------------~~---~~~~~~~nv~gt~~ll~~a~ 1097 (1389)
T TIGR03443      1051 SDEKWSDLT---NEVDVIIHNGALVHWV---------------------------YP---YSKLRDANVIGTINVLNLCA 1097 (1389)
T ss_pred             CHHHHHHHH---hcCCEEEECCcEecCc---------------------------cC---HHHHHHhHHHHHHHHHHHHH
Confidence             11112221   3689999999876421                           11   12334579999999998875


Q ss_pred             hhhccCCCCcEEEEccCcccccCC-chHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcC-----CCCCCCchhhhH
Q 022357          153 PLLELSDSPRLVNLSSYVSALKDL-PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANR-----GWCPHSSAYKVS  226 (298)
Q Consensus       153 ~~~~~~~~g~iv~vsS~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Y~~s  226 (298)
                      .    .+..+++++||........ .+..+...                   .....+ +.+.     ........|+.|
T Consensus      1098 ~----~~~~~~v~vSS~~v~~~~~~~~~~~~~~-------------------~~~~~~-~~e~~~~~~~~~~~~~~Y~~s 1153 (1389)
T TIGR03443      1098 E----GKAKQFSFVSSTSALDTEYYVNLSDELV-------------------QAGGAG-IPESDDLMGSSKGLGTGYGQS 1153 (1389)
T ss_pred             h----CCCceEEEEeCeeecCcccccchhhhhh-------------------hccCCC-CCcccccccccccCCCChHHH
Confidence            4    2345899999976543210 00000000                   000000 0000     111224569999


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEeeCCeeecC
Q 022357          227 KAVINAYTRILAKRYPKFCVNCVCPGFVKTD  257 (298)
Q Consensus       227 K~al~~l~~~la~e~~~i~vn~v~PG~v~t~  257 (298)
                      |.+.+.+++..+.  .++.+..+.||.|..+
T Consensus      1154 K~~aE~l~~~~~~--~g~~~~i~Rpg~v~G~ 1182 (1389)
T TIGR03443      1154 KWVAEYIIREAGK--RGLRGCIVRPGYVTGD 1182 (1389)
T ss_pred             HHHHHHHHHHHHh--CCCCEEEECCCccccC
Confidence            9999999987554  4899999999998664

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.03  E-value=5.8e-10  Score=97.04  Aligned_cols=101  Identities=17%  Similarity=0.163  Sum_probs=72.8

Q ss_pred             CCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCccEEEEc
Q 022357           14 SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANN   93 (298)
Q Consensus        14 as~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~id~lv~n   93 (298)
                      +|||||+++|++|+++|++|+++++...        +..       .....+|+++.++++.+++.+.+.++++|++|||
T Consensus        23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~-------~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnn   87 (227)
T TIGR02114        23 STGHLGKIITETFLSAGHEVTLVTTKRA--------LKP-------EPHPNLSIREIETTKDLLITLKELVQEHDILIHS   87 (227)
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc-------ccCCcceeecHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4789999999999999999999876311        110       0124589999999999999999999999999999


Q ss_pred             cccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhh
Q 022357           94 AGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL  155 (298)
Q Consensus        94 Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  155 (298)
                      ||+....                       ++...+.++|++.   +..+.|++.+-.-..+
T Consensus        88 Agv~d~~-----------------------~~~~~s~e~~~~~---~~~~~~~~~~~~~~Ki  123 (227)
T TIGR02114        88 MAVSDYT-----------------------PVYMTDLEQVQAS---DNLNEFLSKQNHEAKI  123 (227)
T ss_pred             CEecccc-----------------------chhhCCHHHHhhh---cchhhhhccccccCCc
Confidence            9976433                       2233566777655   4456666665333333

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.97  E-value=5.9e-09  Score=91.15  Aligned_cols=186  Identities=21%  Similarity=0.185  Sum_probs=122.2

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASK--GITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~--G~~Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      |+....+.++||||.|.||+..+..++..  .++.+.++.-.- .....+++...    ..+..+++.|+.+...+..++
T Consensus         1 ~~~~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n----~p~ykfv~~di~~~~~~~~~~   76 (331)
T KOG0747|consen    1 MATYKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRN----SPNYKFVEGDIADADLVLYLF   76 (331)
T ss_pred             CCCCccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhcc----CCCceEeeccccchHHHHhhh
Confidence            34445689999999999999999999975  455554443211 01122222222    123889999999998877766


Q ss_pred             HHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc
Q 022357           78 DFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL  157 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  157 (298)
                      .     ..++|.|+|-|+.....                           ...-+.-+.++.|++++..|++.+.-..  
T Consensus        77 ~-----~~~id~vihfaa~t~vd---------------------------~s~~~~~~~~~nnil~t~~Lle~~~~sg--  122 (331)
T KOG0747|consen   77 E-----TEEIDTVIHFAAQTHVD---------------------------RSFGDSFEFTKNNILSTHVLLEAVRVSG--  122 (331)
T ss_pred             c-----cCchhhhhhhHhhhhhh---------------------------hhcCchHHHhcCCchhhhhHHHHHHhcc--
Confidence            4     24899999999865431                           2223334678999999999999987754  


Q ss_pred             CCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH
Q 022357          158 SDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       158 ~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l  237 (298)
                       +-.++|++|+..-.....                              .+-...+...+-....|++||+|.+++.+++
T Consensus       123 -~i~~fvhvSTdeVYGds~------------------------------~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy  171 (331)
T KOG0747|consen  123 -NIRRFVHVSTDEVYGDSD------------------------------EDAVVGEASLLNPTNPYAASKAAAEMLVRSY  171 (331)
T ss_pred             -CeeEEEEecccceecCcc------------------------------ccccccccccCCCCCchHHHHHHHHHHHHHH
Confidence             335899999965443220                              0001112333344678999999999999999


Q ss_pred             HHhCCCcEEEEeeCCeeec
Q 022357          238 AKRYPKFCVNCVCPGFVKT  256 (298)
Q Consensus       238 a~e~~~i~vn~v~PG~v~t  256 (298)
                      ...| ++.|..+.-+-|..
T Consensus       172 ~~sy-~lpvv~~R~nnVYG  189 (331)
T KOG0747|consen  172 GRSY-GLPVVTTRMNNVYG  189 (331)
T ss_pred             hhcc-CCcEEEEeccCccC
Confidence            9998 44444444443333

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.93  E-value=9.6e-09  Score=89.86  Aligned_cols=168  Identities=20%  Similarity=0.120  Sum_probs=112.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ..+.+++||||.|.||+++|.+|..+|+.|++.+.-...-+..+.-+...    .++..+.-|+..+     ++.     
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~----~~fel~~hdv~~p-----l~~-----   90 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGH----PNFELIRHDVVEP-----LLK-----   90 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccC----cceeEEEeechhH-----HHH-----
Confidence            35689999999999999999999999999999986554333333322211    1255666666544     443     


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        .+|-++|.|..+++....                           ....+.+.+|+.++.+.+..+....     .|+
T Consensus        91 --evD~IyhLAapasp~~y~---------------------------~npvktIktN~igtln~lglakrv~-----aR~  136 (350)
T KOG1429|consen   91 --EVDQIYHLAAPASPPHYK---------------------------YNPVKTIKTNVIGTLNMLGLAKRVG-----ARF  136 (350)
T ss_pred             --HhhhhhhhccCCCCcccc---------------------------cCccceeeecchhhHHHHHHHHHhC-----ceE
Confidence              579999999988764211                           1112568999999999888876643     588


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      ++.|++.-+....              .+.    ...++        .+...+...++.|...|.+.+.|+.+..++. |
T Consensus       137 l~aSTseVYgdp~--------------~hp----q~e~y--------wg~vnpigpr~cydegKr~aE~L~~~y~k~~-g  189 (350)
T KOG1429|consen  137 LLASTSEVYGDPL--------------VHP----QVETY--------WGNVNPIGPRSCYDEGKRVAETLCYAYHKQE-G  189 (350)
T ss_pred             EEeecccccCCcc--------------cCC----Ccccc--------ccccCcCCchhhhhHHHHHHHHHHHHhhccc-C
Confidence            8888755443211              000    01111        1223444557889999999999999999986 5


Q ss_pred             cEE
Q 022357          244 FCV  246 (298)
Q Consensus       244 i~v  246 (298)
                      |-|
T Consensus       190 iE~  192 (350)
T KOG1429|consen  190 IEV  192 (350)
T ss_pred             cEE
Confidence            543

>PLN00016 RNA-binding protein; Provisional

Probab=98.87  E-value=4e-08  Score=91.97  Aligned_cols=78  Identities=24%  Similarity=0.294  Sum_probs=55.8

Q ss_pred             CCcEEEEe----CCCCchhHHHHHHHHHCCCEEEEEecCchhhHHH-------HHHHHhcCCCCcceeEEEeccCcHHHH
Q 022357            5 TKKYAVVT----GSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-------VEKLKASGVDPELLLFHQLDISDLASV   73 (298)
Q Consensus         5 ~~~~vlIT----Gas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Dls~~~~v   73 (298)
                      ..++||||    ||||.||++++++|+++|++|++++|+.......       ..++...     .+.++.+|+++   +
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~-----~v~~v~~D~~d---~  122 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSA-----GVKTVWGDPAD---V  122 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhc-----CceEEEecHHH---H
Confidence            45789999    9999999999999999999999999987542211       1122211     16788888876   3


Q ss_pred             HHHHHHHHHhcCCccEEEEccc
Q 022357           74 SSLADFIKTQFGKLDILANNAG   95 (298)
Q Consensus        74 ~~~~~~~~~~~g~id~lv~nAg   95 (298)
                      ++++.     ...+|+|||+++
T Consensus       123 ~~~~~-----~~~~d~Vi~~~~  139 (378)
T PLN00016        123 KSKVA-----GAGFDVVYDNNG  139 (378)
T ss_pred             Hhhhc-----cCCccEEEeCCC
Confidence            33321     136899999875

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.79  E-value=1.3e-07  Score=89.16  Aligned_cols=214  Identities=18%  Similarity=0.123  Sum_probs=126.7

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCC---CEEEEEecCch--hhHHH---------HHHHHhc-CCCCcceeEEEeccC
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKG---ITVVLTARDEK--RGLEA---------VEKLKAS-GVDPELLLFHQLDIS   68 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G---~~Vii~~r~~~--~~~~~---------~~~~~~~-~~~~~~~~~~~~Dls   68 (298)
                      +.+|+++||||||++|+-++.+|+..-   -++++.-|...  ...+.         .+.+.+. +..-.++..+..|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            578999999999999999999999752   26777777543  12222         2222222 222345888899999


Q ss_pred             cHHH-HHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHH
Q 022357           69 DLAS-VSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT  147 (298)
Q Consensus        69 ~~~~-v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l  147 (298)
                      +++- +...-.+  .....+|++||+|+...+                              .|..+..+.+|..|+.++
T Consensus        90 ~~~LGis~~D~~--~l~~eV~ivih~AAtvrF------------------------------de~l~~al~iNt~Gt~~~  137 (467)
T KOG1221|consen   90 EPDLGISESDLR--TLADEVNIVIHSAATVRF------------------------------DEPLDVALGINTRGTRNV  137 (467)
T ss_pred             CcccCCChHHHH--HHHhcCCEEEEeeeeecc------------------------------chhhhhhhhhhhHhHHHH
Confidence            7752 2211111  112379999999998643                              355567799999999999


Q ss_pred             HHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHH
Q 022357          148 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSK  227 (298)
Q Consensus       148 ~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  227 (298)
                      ++.+.....   -...+.+|+...- ........+.+....+..++.+..+..+...+..+-....... .+...|.-+|
T Consensus       138 l~lak~~~~---l~~~vhVSTAy~n-~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~-~~PNTYtfTK  212 (467)
T KOG1221|consen  138 LQLAKEMVK---LKALVHVSTAYSN-CNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLG-GWPNTYTFTK  212 (467)
T ss_pred             HHHHHHhhh---hheEEEeehhhee-cccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcC-CCCCceeehH
Confidence            998877553   2367888886655 3333233334444444444443333322221111110000000 2345688899


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEeeCCeeecC
Q 022357          228 AVINAYTRILAKRYPKFCVNCVCPGFVKTD  257 (298)
Q Consensus       228 ~al~~l~~~la~e~~~i~vn~v~PG~v~t~  257 (298)
                      +-.+++...-+..+   -+..+.|.+|...
T Consensus       213 al~E~~i~~~~~~l---PivIiRPsiI~st  239 (467)
T KOG1221|consen  213 ALAEMVIQKEAENL---PLVIIRPSIITST  239 (467)
T ss_pred             hhHHHHHHhhccCC---CeEEEcCCceecc
Confidence            98888776555444   5666666666553

>PRK12320 hypothetical protein; Provisional

Probab=98.79  E-value=4.5e-08  Score=97.36  Aligned_cols=104  Identities=19%  Similarity=0.193  Sum_probs=77.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      ++|||||+|.||++++.+|.++|++|++++|+....       .  .   ..+.++++|+++.. +.+++       ..+
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-------~--~---~~ve~v~~Dl~d~~-l~~al-------~~~   61 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-------L--D---PRVDYVCASLRNPV-LQELA-------GEA   61 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-------c--c---CCceEEEccCCCHH-HHHHh-------cCC
Confidence            699999999999999999999999999999875321       0  1   12788999999873 43333       268


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+|||+|+....                             .      ...+|+.++.++++++..    .+ .++|++|
T Consensus        62 D~VIHLAa~~~~-----------------------------~------~~~vNv~Gt~nLleAA~~----~G-vRiV~~S  101 (699)
T PRK12320         62 DAVIHLAPVDTS-----------------------------A------PGGVGITGLAHVANAAAR----AG-ARLLFVS  101 (699)
T ss_pred             CEEEEcCccCcc-----------------------------c------hhhHHHHHHHHHHHHHHH----cC-CeEEEEE
Confidence            999999985311                             0      124788999998888754    23 4899999


Q ss_pred             cCcc
Q 022357          168 SYVS  171 (298)
Q Consensus       168 S~~~  171 (298)
                      |..+
T Consensus       102 S~~G  105 (699)
T PRK12320        102 QAAG  105 (699)
T ss_pred             CCCC
Confidence            8643

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.73  E-value=7e-08  Score=87.08  Aligned_cols=84  Identities=20%  Similarity=0.263  Sum_probs=65.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCc---hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDE---KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~-Vii~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      .+++|+++|+|| ||+|++++..|++.|++ |++++|+.   ++++++.+++......   +.+..+|+++.++++..++
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~---~~~~~~d~~~~~~~~~~~~  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPE---CIVNVYDLNDTEKLKAEIA  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCC---ceeEEechhhhhHHHhhhc
Confidence            356899999999 69999999999999996 99999997   5677777777554332   4566788887777665543


Q ss_pred             HHHHhcCCccEEEEccccC
Q 022357           79 FIKTQFGKLDILANNAGIA   97 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~   97 (298)
                             ..|+||||..+.
T Consensus       199 -------~~DilINaTp~G  210 (289)
T PRK12548        199 -------SSDILVNATLVG  210 (289)
T ss_pred             -------cCCEEEEeCCCC
Confidence                   569999988543

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.70  E-value=5.5e-08  Score=91.25  Aligned_cols=81  Identities=16%  Similarity=0.237  Sum_probs=63.0

Q ss_pred             cCCCcEEEEeCC----------------CCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEec
Q 022357            3 EATKKYAVVTGS----------------NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD   66 (298)
Q Consensus         3 ~~~~~~vlITGa----------------s~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D   66 (298)
                      ++.||++|||||                ||++|+++|++|+++|++|++++++.. +.       ..      .....+|
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~~------~~~~~~d  250 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------TP------AGVKRID  250 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------CC------CCcEEEc
Confidence            367899999999                555999999999999999999998752 11       01      1134679


Q ss_pred             cCcHHHHHHHHHHHHHhcCCccEEEEccccCCcc
Q 022357           67 ISDLASVSSLADFIKTQFGKLDILANNAGIASVK  100 (298)
Q Consensus        67 ls~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~  100 (298)
                      +++.+++.+.+.   +.++++|++|||||+....
T Consensus       251 v~~~~~~~~~v~---~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        251 VESAQEMLDAVL---AALPQADIFIMAAAVADYR  281 (399)
T ss_pred             cCCHHHHHHHHH---HhcCCCCEEEEcccccccc
Confidence            999888776665   4578999999999987544

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.62  E-value=3.4e-07  Score=77.69  Aligned_cols=83  Identities=27%  Similarity=0.269  Sum_probs=66.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++++++|+||+|++|+.+++.|+++|++|++++|+.+++....+.+.....    .....+|..+.+++.+.++    
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~----~~~~~~~~~~~~~~~~~~~----   96 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFG----EGVGAVETSDDAARAAAIK----   96 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcC----CcEEEeeCCCHHHHHHHHh----
Confidence            45789999999999999999999999999999999998888877777753322    3455678888888776664    


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                         ..|++|++...
T Consensus        97 ---~~diVi~at~~  107 (194)
T cd01078          97 ---GADVVFAAGAA  107 (194)
T ss_pred             ---cCCEEEECCCC
Confidence               57988887653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.62  E-value=2.9e-07  Score=80.65  Aligned_cols=189  Identities=16%  Similarity=0.143  Sum_probs=106.8

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCcc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~id   88 (298)
                      ++||||||.||++++.+|.+.|++|+++.|++.+.......             .   +...+.+....+      ..+|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~-------------~---v~~~~~~~~~~~------~~~D   58 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP-------------N---VTLWEGLADALT------LGID   58 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc-------------c---ccccchhhhccc------CCCC
Confidence            58999999999999999999999999999998753332111             0   111222222211      1699


Q ss_pred             EEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC-CCCcEEEEc
Q 022357           89 ILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLVNLS  167 (298)
Q Consensus        89 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~vs  167 (298)
                      +|||.||..-.                   +.-|.+      +.=++.++    +-+..++.+..++.+. +..++.+-+
T Consensus        59 avINLAG~~I~-------------------~rrWt~------~~K~~i~~----SRi~~T~~L~e~I~~~~~~P~~~isa  109 (297)
T COG1090          59 AVINLAGEPIA-------------------ERRWTE------KQKEEIRQ----SRINTTEKLVELIAASETKPKVLISA  109 (297)
T ss_pred             EEEECCCCccc-------------------cccCCH------HHHHHHHH----HHhHHHHHHHHHHHhccCCCcEEEec
Confidence            99999996532                   222331      11122222    3344555555555533 345677777


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVN  247 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn  247 (298)
                      |..|+-+....                              -.+.+. .+++.  --.++.|...=-.++..+..++||.
T Consensus       110 SAvGyYG~~~~------------------------------~~~tE~-~~~g~--~Fla~lc~~WE~~a~~a~~~gtRvv  156 (297)
T COG1090         110 SAVGYYGHSGD------------------------------RVVTEE-SPPGD--DFLAQLCQDWEEEALQAQQLGTRVV  156 (297)
T ss_pred             ceEEEecCCCc------------------------------eeeecC-CCCCC--ChHHHHHHHHHHHHhhhhhcCceEE
Confidence            76666443100                              001111 11111  1123333322222333344699999


Q ss_pred             EeeCCeeecCCC----------------------CCCCCCChhhhhhhhhhhhccC
Q 022357          248 CVCPGFVKTDIN----------------------FHAGILSVEEGAESPVKLALLP  281 (298)
Q Consensus       248 ~v~PG~v~t~~~----------------------~~~~~~~~~~~a~~~~~~~~~~  281 (298)
                      .+.-|+|..+-.                      ...+|...+|..+.+++++.+.
T Consensus       157 llRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~  212 (297)
T COG1090         157 LLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENE  212 (297)
T ss_pred             EEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCc
Confidence            999999988521                      0124678888888888877653

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.59  E-value=1.5e-06  Score=75.70  Aligned_cols=75  Identities=25%  Similarity=0.292  Sum_probs=60.7

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCcc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~id   88 (298)
                      |+|+||||.+|+.+++.|++.+++|.++.|+..  ......++..+     +..+.+|..+.+++.++++       .+|
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~~g-----~~vv~~d~~~~~~l~~al~-------g~d   66 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQALG-----AEVVEADYDDPESLVAALK-------GVD   66 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHHTT-----TEEEES-TT-HHHHHHHHT-------TCS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhccc-----ceEeecccCCHHHHHHHHc-------CCc
Confidence            689999999999999999999999999999983  23344555544     5677999999999888886       789


Q ss_pred             EEEEccccC
Q 022357           89 ILANNAGIA   97 (298)
Q Consensus        89 ~lv~nAg~~   97 (298)
                      .|+++.+..
T Consensus        67 ~v~~~~~~~   75 (233)
T PF05368_consen   67 AVFSVTPPS   75 (233)
T ss_dssp             EEEEESSCS
T ss_pred             eEEeecCcc
Confidence            999988754

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.55  E-value=3.7e-06  Score=80.69  Aligned_cols=80  Identities=23%  Similarity=0.255  Sum_probs=62.1

Q ss_pred             CCCcEEEEeCCC-CchhHHHHHHHHHCCCEEEEEecCch-hhHHHHHHH-HhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSN-KGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKL-KASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         4 ~~~~~vlITGas-~gIG~a~a~~La~~G~~Vii~~r~~~-~~~~~~~~~-~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      ..++++|||||+ +.||.+++.+|++.|++||++..+-. +..+....+ ..++..+..+.++..++++..+|+.+++.+
T Consensus       394 y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewI  473 (866)
T COG4982         394 YGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWI  473 (866)
T ss_pred             cccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHh
Confidence            356899999988 67999999999999999999876543 333344333 334444556899999999999999999988


Q ss_pred             HHh
Q 022357           81 KTQ   83 (298)
Q Consensus        81 ~~~   83 (298)
                      -++
T Consensus       474 g~e  476 (866)
T COG4982         474 GDE  476 (866)
T ss_pred             ccc
Confidence            653

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.52  E-value=1.9e-06  Score=82.47  Aligned_cols=62  Identities=18%  Similarity=0.143  Sum_probs=49.8

Q ss_pred             HHHHHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhh
Q 022357          145 KQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYK  224 (298)
Q Consensus       145 ~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  224 (298)
                      +.+++..++.|.  +.|+||+++|..+..                                             ....|+
T Consensus       103 ~~~~~~~l~~l~--~~griv~i~s~~~~~---------------------------------------------~~~~~~  135 (450)
T PRK08261        103 YEFFHPVLRSLA--PCGRVVVLGRPPEAA---------------------------------------------ADPAAA  135 (450)
T ss_pred             HHHHHHHHHhcc--CCCEEEEEccccccC---------------------------------------------CchHHH
Confidence            456677777774  458999999965431                                             234699


Q ss_pred             hHHHHHHHHHHHHHHhC-CCcEEEEeeCCe
Q 022357          225 VSKAVINAYTRILAKRY-PKFCVNCVCPGF  253 (298)
Q Consensus       225 ~sK~al~~l~~~la~e~-~~i~vn~v~PG~  253 (298)
                      ++|+|+.+|+|+++.|+ .++++|.|.|+.
T Consensus       136 ~akaal~gl~rsla~E~~~gi~v~~i~~~~  165 (450)
T PRK08261        136 AAQRALEGFTRSLGKELRRGATAQLVYVAP  165 (450)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCEEEEEecCC
Confidence            99999999999999999 589999999986

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.49  E-value=1.2e-06  Score=77.02  Aligned_cols=173  Identities=16%  Similarity=0.178  Sum_probs=115.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +.+|-++-|.||||.+|+-++.+|++.|-.|++.+|-.+.......-+.+.+    .+.+...|+.|+++|+++++    
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLG----Qvl~~~fd~~DedSIr~vvk----  129 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLG----QVLFMKFDLRDEDSIRAVVK----  129 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccccc----ceeeeccCCCCHHHHHHHHH----
Confidence            4567789999999999999999999999999999997665444333333333    38999999999999999997    


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                         .-++|||.-|--....                              .+ ..-++|+.++-.|.+.+..    .+.-+
T Consensus       130 ---~sNVVINLIGrd~eTk------------------------------nf-~f~Dvn~~~aerlAricke----~GVer  171 (391)
T KOG2865|consen  130 ---HSNVVINLIGRDYETK------------------------------NF-SFEDVNVHIAERLARICKE----AGVER  171 (391)
T ss_pred             ---hCcEEEEeeccccccC------------------------------Cc-ccccccchHHHHHHHHHHh----hChhh
Confidence               4589999988543221                              00 2346788888777777644    23458


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHh-hhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKD-YEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      +|.+|+..+....                  -.+++..-...+ ...+.+.+.........|+.--.-++-++.-+.+
T Consensus       172 fIhvS~Lganv~s------------------~Sr~LrsK~~gE~aVrdafPeAtIirPa~iyG~eDrfln~ya~~~rk  231 (391)
T KOG2865|consen  172 FIHVSCLGANVKS------------------PSRMLRSKAAGEEAVRDAFPEATIIRPADIYGTEDRFLNYYASFWRK  231 (391)
T ss_pred             eeehhhccccccC------------------hHHHHHhhhhhHHHHHhhCCcceeechhhhcccchhHHHHHHHHHHh
Confidence            8999886643221                  112222222111 2223344555555667787777777776655554

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.48  E-value=2.2e-06  Score=75.82  Aligned_cols=74  Identities=22%  Similarity=0.168  Sum_probs=62.5

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      +++|||||||.+|++++++|.++|++|.+..|+++.+....       .   .+.+...|+.++.++...++       .
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~---~v~~~~~d~~~~~~l~~a~~-------G   63 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------G---GVEVVLGDLRDPKSLVAGAK-------G   63 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------C---CcEEEEeccCCHhHHHHHhc-------c
Confidence            36999999999999999999999999999999987655543       1   18889999999999888876       6


Q ss_pred             ccEEEEccccC
Q 022357           87 LDILANNAGIA   97 (298)
Q Consensus        87 id~lv~nAg~~   97 (298)
                      +|.+++..+..
T Consensus        64 ~~~~~~i~~~~   74 (275)
T COG0702          64 VDGVLLISGLL   74 (275)
T ss_pred             ccEEEEEeccc
Confidence            78887777754

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.45  E-value=4.9e-07  Score=78.81  Aligned_cols=99  Identities=15%  Similarity=0.146  Sum_probs=60.1

Q ss_pred             EEEEeCCC-CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            8 YAVVTGSN-KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         8 ~vlITGas-~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      +-.||..| |+||+++|++|+++|++|++++|....        ......  .+.++.++     +.....+.+.+.++.
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~--------~~~~~~--~v~~i~v~-----s~~~m~~~l~~~~~~   81 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV--------KPEPHP--NLSIIEIE-----NVDDLLETLEPLVKD   81 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccc--------cCCCCC--CeEEEEEe-----cHHHHHHHHHHHhcC
Confidence            44556544 559999999999999999999876421        000001  14455432     222233333344567


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeH
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGT  144 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~  144 (298)
                      +|+||||||+....+                       ....+.+.+.+++++|.+..
T Consensus        82 ~DivIh~AAvsd~~~-----------------------~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         82 HDVLIHSMAVSDYTP-----------------------VYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             CCEEEeCCccCCcee-----------------------hhhhhhhhhhhhhhhhhhhc
Confidence            999999999864321                       12246677777777766443

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.42  E-value=9.3e-06  Score=67.13  Aligned_cols=184  Identities=19%  Similarity=0.104  Sum_probs=120.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      ++.|.||||-+|+.++++..+||++|..+.||+.+....    +       .+.+++.|+.++.++.+.+.       ..
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----~-------~~~i~q~Difd~~~~a~~l~-------g~   63 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----Q-------GVTILQKDIFDLTSLASDLA-------GH   63 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----c-------cceeecccccChhhhHhhhc-------CC
Confidence            578999999999999999999999999999998765443    1       16788999999998876665       78


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+||..-|...+.                            ..+.           .....+.++..++.....|+++++
T Consensus        64 DaVIsA~~~~~~~----------------------------~~~~-----------~~k~~~~li~~l~~agv~RllVVG  104 (211)
T COG2910          64 DAVISAFGAGASD----------------------------NDEL-----------HSKSIEALIEALKGAGVPRLLVVG  104 (211)
T ss_pred             ceEEEeccCCCCC----------------------------hhHH-----------HHHHHHHHHHHHhhcCCeeEEEEc
Confidence            9999988765221                            0011           111245666666655668999998


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVN  247 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn  247 (298)
                      ...+.--.                                +|.-..+.+...-..|..+++.-+. ...|..+. ++...
T Consensus       105 GAGSL~id--------------------------------~g~rLvD~p~fP~ey~~~A~~~ae~-L~~Lr~~~-~l~WT  150 (211)
T COG2910         105 GAGSLEID--------------------------------EGTRLVDTPDFPAEYKPEALAQAEF-LDSLRAEK-SLDWT  150 (211)
T ss_pred             CccceEEc--------------------------------CCceeecCCCCchhHHHHHHHHHHH-HHHHhhcc-CcceE
Confidence            75543111                                0001111221222334555544443 45677774 47788


Q ss_pred             EeeCCeeecCCCCC----------------CCCCChhhhhhhhhhhhccCC
Q 022357          248 CVCPGFVKTDINFH----------------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       248 ~v~PG~v~t~~~~~----------------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      .|+|.....|..+.                .+..+.++.|-.++.-+..|.
T Consensus       151 fvSPaa~f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~  201 (211)
T COG2910         151 FVSPAAFFEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQ  201 (211)
T ss_pred             EeCcHHhcCCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhccc
Confidence            89998887773221                135678888888777776554

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.35  E-value=1.3e-06  Score=81.77  Aligned_cols=81  Identities=16%  Similarity=0.230  Sum_probs=61.6

Q ss_pred             cCCCcEEEEeCC---------------CCc-hhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEec
Q 022357            3 EATKKYAVVTGS---------------NKG-IGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD   66 (298)
Q Consensus         3 ~~~~~~vlITGa---------------s~g-IG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D   66 (298)
                      .+.||++|||||               |+| +|.++|++|..+|++|+++++.....         ..     .....+|
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~-----~~~~~~~  247 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TP-----PGVKSIK  247 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CC-----CCcEEEE
Confidence            367899999999               666 99999999999999999988665321         11     1224689


Q ss_pred             cCcHHHH-HHHHHHHHHhcCCccEEEEccccCCcc
Q 022357           67 ISDLASV-SSLADFIKTQFGKLDILANNAGIASVK  100 (298)
Q Consensus        67 ls~~~~v-~~~~~~~~~~~g~id~lv~nAg~~~~~  100 (298)
                      +++.+++ +.+.+..   ++.+|++|+|||+.-..
T Consensus       248 v~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~  279 (390)
T TIGR00521       248 VSTAEEMLEAALNEL---AKDFDIFISAAAVADFK  279 (390)
T ss_pred             eccHHHHHHHHHHhh---cccCCEEEEcccccccc
Confidence            9999888 5455333   46899999999997554

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.22  E-value=5.2e-06  Score=77.16  Aligned_cols=77  Identities=22%  Similarity=0.316  Sum_probs=64.9

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +.+||.|| |+||+.+|..|+++| .+|++.+|+.++..++.+....      ++.+.++|+.+.+.+.++++       
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~------~v~~~~vD~~d~~al~~li~-------   67 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGG------KVEALQVDAADVDALVALIK-------   67 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccc------cceeEEecccChHHHHHHHh-------
Confidence            56899999 999999999999999 8999999998877776555433      38999999999999888876       


Q ss_pred             CccEEEEccccC
Q 022357           86 KLDILANNAGIA   97 (298)
Q Consensus        86 ~id~lv~nAg~~   97 (298)
                      ..|++|+++...
T Consensus        68 ~~d~VIn~~p~~   79 (389)
T COG1748          68 DFDLVINAAPPF   79 (389)
T ss_pred             cCCEEEEeCCch
Confidence            449999998754

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.20  E-value=2.9e-06  Score=73.09  Aligned_cols=183  Identities=20%  Similarity=0.114  Sum_probs=117.4

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH-HHHHHH-hc-CCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE-AVEKLK-AS-GVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~-~~~~~~-~~-~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +|++||||-+|.=|+-++.-|++.|++|..+-|.....+- .++.+- .+ .....+....-.|++|...+.+++..+  
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i--  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI--  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence            5799999999999999999999999999988876554322 222221 11 111234777789999999999998876  


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                         +++-+.|.|+.....                           ++.+..+-.-++...|++.|+.++...-... +-+
T Consensus       106 ---kPtEiYnLaAQSHVk---------------------------vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~-~Vr  154 (376)
T KOG1372|consen  106 ---KPTEVYNLAAQSHVK---------------------------VSFDLPEYTAEVDAVGTLRLLDAIRACRLTE-KVR  154 (376)
T ss_pred             ---CchhhhhhhhhcceE---------------------------EEeecccceeeccchhhhhHHHHHHhcCccc-cee
Confidence               678888888766443                           2333344456778899999998886532211 123


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      +--.|++. ..+..                              .+-+..+..++...+.|+++|-.-..++-.++--| 
T Consensus       155 fYQAstSE-lyGkv------------------------------~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYn  203 (376)
T KOG1372|consen  155 FYQASTSE-LYGKV------------------------------QEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYN  203 (376)
T ss_pred             EEecccHh-hcccc------------------------------cCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhc
Confidence            33333321 11110                              01112345677778999999977665554444444 


Q ss_pred             ----CCcEEEEeeCC
Q 022357          242 ----PKFCVNCVCPG  252 (298)
Q Consensus       242 ----~~i~vn~v~PG  252 (298)
                          .||-+|.=+|-
T Consensus       204 mfAcNGILFNHESPR  218 (376)
T KOG1372|consen  204 MFACNGILFNHESPR  218 (376)
T ss_pred             ceeeccEeecCCCCc
Confidence                46777776665

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.18  E-value=1.9e-05  Score=80.49  Aligned_cols=185  Identities=17%  Similarity=0.200  Sum_probs=132.2

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCchh---hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKR---GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~-Vii~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      -|.++|+||-||.|.+++..|..+|++ +++++|+.=+   -...+...+..+.+   +.+-..|++.....+.++++..
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVq---V~vsT~nitt~~ga~~Li~~s~ 1844 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQ---VQVSTSNITTAEGARGLIEESN 1844 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeE---EEEecccchhhhhHHHHHHHhh
Confidence            478999999999999999999999996 7778887432   23345566666654   5555667777777777765443


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                       +.+.+..++|.|.+....                       -+++++++.|+..-+..+.|+.+|-+.-...-.+  -.
T Consensus      1845 -kl~~vGGiFnLA~VLRD~-----------------------LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~--Ld 1898 (2376)
T KOG1202|consen 1845 -KLGPVGGIFNLAAVLRDG-----------------------LIENQTPKNFKDVAKPKYSGTINLDRVSREICPE--LD 1898 (2376)
T ss_pred             -hcccccchhhHHHHHHhh-----------------------hhcccChhHHHhhhccceeeeeehhhhhhhhCcc--cc
Confidence             347889999999876433                       2234688888888999999999977665443211  14


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      -+|..||+..-+++                                          .+++.|+-+..|++-++.--+.+-
T Consensus      1899 yFv~FSSvscGRGN------------------------------------------~GQtNYG~aNS~MERiceqRr~~G 1936 (2376)
T KOG1202|consen 1899 YFVVFSSVSCGRGN------------------------------------------AGQTNYGLANSAMERICEQRRHEG 1936 (2376)
T ss_pred             eEEEEEeecccCCC------------------------------------------CcccccchhhHHHHHHHHHhhhcC
Confidence            67888887655544                                          778999999999999987555553


Q ss_pred             -CCcEEEEee---CCeeecCCCCC
Q 022357          242 -PKFCVNCVC---PGFVKTDINFH  261 (298)
Q Consensus       242 -~~i~vn~v~---PG~v~t~~~~~  261 (298)
                       ||+.|-+=+   .|.+...|.++
T Consensus      1937 fPG~AiQWGAIGDvGlilEnmgdN 1960 (2376)
T KOG1202|consen 1937 FPGTAIQWGAIGDVGLILENMGDN 1960 (2376)
T ss_pred             CCcceeeeecccceeeeeeecCCC
Confidence             787776533   45666666544

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.13  E-value=1.3e-05  Score=64.04  Aligned_cols=79  Identities=18%  Similarity=0.247  Sum_probs=59.2

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~-Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .++++++++|.|+ ||.|++++..|++.|++ |+++.|+.++++++.+.+....     +.++  ++.+   +.....  
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~-----~~~~--~~~~---~~~~~~--   74 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVN-----IEAI--PLED---LEEALQ--   74 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCS-----EEEE--EGGG---HCHHHH--
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccc-----ccee--eHHH---HHHHHh--
Confidence            3578999999998 99999999999999997 9999999999988888882211     3333  3333   333333  


Q ss_pred             HHhcCCccEEEEccccCC
Q 022357           81 KTQFGKLDILANNAGIAS   98 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~   98 (298)
                           ..|++|++.+...
T Consensus        75 -----~~DivI~aT~~~~   87 (135)
T PF01488_consen   75 -----EADIVINATPSGM   87 (135)
T ss_dssp             -----TESEEEE-SSTTS
T ss_pred             -----hCCeEEEecCCCC
Confidence                 6899999987653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.09  E-value=1.6e-05  Score=76.10  Aligned_cols=79  Identities=23%  Similarity=0.293  Sum_probs=59.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++++|+++|+|+++ +|.++|+.|+++|++|++.+++. +...+..+++...+     +.++..|..+.           
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~-----------   64 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG-----IELVLGEYPEE-----------   64 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC-----CEEEeCCcchh-----------
Confidence            57789999999877 99999999999999999999985 34444455554433     55677777651           


Q ss_pred             HhcCCccEEEEccccCCc
Q 022357           82 TQFGKLDILANNAGIASV   99 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~   99 (298)
                       ..+.+|+||+++|....
T Consensus        65 -~~~~~d~vv~~~g~~~~   81 (450)
T PRK14106         65 -FLEGVDLVVVSPGVPLD   81 (450)
T ss_pred             -HhhcCCEEEECCCCCCC
Confidence             12478999999997543

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.04  E-value=1.9e-05  Score=74.10  Aligned_cols=76  Identities=28%  Similarity=0.376  Sum_probs=58.8

Q ss_pred             EEEeCCCCchhHHHHHHHHHCC-C-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            9 AVVTGSNKGIGFETVRQLASKG-I-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G-~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      |+|.|| |.+|+.+++.|++++ . +|++.+|+.++++...+++.     ..++.+.++|+.|.++++++++       .
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~l~~~~~-------~   67 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLL-----GDRVEAVQVDVNDPESLAELLR-------G   67 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--T-----TTTEEEEE--TTTHHHHHHHHT-------T
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhcc-----ccceeEEEEecCCHHHHHHHHh-------c
Confidence            689999 999999999999986 4 89999999998888777651     1239999999999999888876       5


Q ss_pred             ccEEEEccccC
Q 022357           87 LDILANNAGIA   97 (298)
Q Consensus        87 id~lv~nAg~~   97 (298)
                      .|+|||++|..
T Consensus        68 ~dvVin~~gp~   78 (386)
T PF03435_consen   68 CDVVINCAGPF   78 (386)
T ss_dssp             SSEEEE-SSGG
T ss_pred             CCEEEECCccc
Confidence            69999999865

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK09620 hypothetical protein; Provisional

Probab=98.01  E-value=9e-06  Score=70.79  Aligned_cols=85  Identities=18%  Similarity=0.060  Sum_probs=52.0

Q ss_pred             CCCcEEEEeCCC----------------CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEecc
Q 022357            4 ATKKYAVVTGSN----------------KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI   67 (298)
Q Consensus         4 ~~~~~vlITGas----------------~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl   67 (298)
                      +.||+||||+|.                |.+|+++|++|+++|++|+++++.......   ..    .....+..+..| 
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~----~~~~~~~~V~s~-   72 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI----NNQLELHPFEGI-   72 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc----CCceeEEEEecH-
Confidence            468999999886                999999999999999999988754221100   00    001012333331 


Q ss_pred             CcHHHHHHHHHHHHHhcCCccEEEEccccCCcc
Q 022357           68 SDLASVSSLADFIKTQFGKLDILANNAGIASVK  100 (298)
Q Consensus        68 s~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~  100 (298)
                         .++...+.++.+. ..+|++||+|++.-..
T Consensus        73 ---~d~~~~l~~~~~~-~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         73 ---IDLQDKMKSIITH-EKVDAVIMAAAGSDWV  101 (229)
T ss_pred             ---HHHHHHHHHHhcc-cCCCEEEECcccccee
Confidence               1222222222221 2689999999986544

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.99  E-value=8.8e-05  Score=69.26  Aligned_cols=128  Identities=21%  Similarity=0.208  Sum_probs=80.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHH-HHHhcCCCCcceeEEEeccCcHH-HHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVE-KLKASGVDPELLLFHQLDISDLA-SVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dls~~~-~v~~~~~~~~~   82 (298)
                      +..+|+|+||||++|+-+++.|.++|+.|..+.|+.++...... .....+     ...+..|..... ....+++.+  
T Consensus        78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~-----~~~v~~~~~~~~d~~~~~~~~~--  150 (411)
T KOG1203|consen   78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLG-----LQNVEADVVTAIDILKKLVEAV--  150 (411)
T ss_pred             CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccc-----cceeeeccccccchhhhhhhhc--
Confidence            44689999999999999999999999999999999887666554 111111     333344444333 333333222  


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                       --...+++.++|..+..-                              +..--..+.+.|+.++++++..    .+-.|
T Consensus       151 -~~~~~~v~~~~ggrp~~e------------------------------d~~~p~~VD~~g~knlvdA~~~----aGvk~  195 (411)
T KOG1203|consen  151 -PKGVVIVIKGAGGRPEEE------------------------------DIVTPEKVDYEGTKNLVDACKK----AGVKR  195 (411)
T ss_pred             -cccceeEEecccCCCCcc------------------------------cCCCcceecHHHHHHHHHHHHH----hCCce
Confidence             012456666666543210                              1111235677888899999843    34569


Q ss_pred             EEEEccCccccc
Q 022357          163 LVNLSSYVSALK  174 (298)
Q Consensus       163 iv~vsS~~~~~~  174 (298)
                      ++++||+.+...
T Consensus       196 ~vlv~si~~~~~  207 (411)
T KOG1203|consen  196 VVLVGSIGGTKF  207 (411)
T ss_pred             EEEEEeecCccc
Confidence            999999776543

>PLN00106 malate dehydrogenase

Probab=97.95  E-value=7.1e-05  Score=68.49  Aligned_cols=160  Identities=14%  Similarity=0.071  Sum_probs=92.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .++|+|||++|.||..++..|+.++.  +++++++++  ....+..+......   .  ...++++.+++...++     
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~---~--~i~~~~~~~d~~~~l~-----   85 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTP---A--QVRGFLGDDQLGDALK-----   85 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcC---c--eEEEEeCCCCHHHHcC-----
Confidence            46899999999999999999997654  799999887  22222233322211   1  1223333434444333     


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        ..|++|+.||....+                             -..+++.+..|+.....+.+.+    ++....++
T Consensus        86 --~aDiVVitAG~~~~~-----------------------------g~~R~dll~~N~~i~~~i~~~i----~~~~p~ai  130 (323)
T PLN00106         86 --GADLVIIPAGVPRKP-----------------------------GMTRDDLFNINAGIVKTLCEAV----AKHCPNAL  130 (323)
T ss_pred             --CCCEEEEeCCCCCCC-----------------------------CCCHHHHHHHHHHHHHHHHHHH----HHHCCCeE
Confidence              789999999986431                             1123455677776554444444    43444567


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      ++++|.=...                 -...+-+.            +.....++....|+.++.-..-|-..+|.++
T Consensus       131 vivvSNPvD~-----------------~~~i~t~~------------~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~l  179 (323)
T PLN00106        131 VNIISNPVNS-----------------TVPIAAEV------------LKKAGVYDPKKLFGVTTLDVVRANTFVAEKK  179 (323)
T ss_pred             EEEeCCCccc-----------------cHHHHHHH------------HHHcCCCCcceEEEEecchHHHHHHHHHHHh
Confidence            7777632210                 00000000            0112334567889999866666777778877

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.92  E-value=4.8e-05  Score=69.85  Aligned_cols=74  Identities=27%  Similarity=0.330  Sum_probs=54.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHC-C-CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASK-G-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~-G-~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .+.+|+++||||+|.||+.+|++|+++ | .+|++..|+..++..+..++..            .|+.   ++.++    
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~------------~~i~---~l~~~----  212 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG------------GKIL---SLEEA----  212 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc------------ccHH---hHHHH----
Confidence            467899999999999999999999865 5 5899999998777666554421            1222   22222    


Q ss_pred             HHhcCCccEEEEccccCC
Q 022357           81 KTQFGKLDILANNAGIAS   98 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~   98 (298)
                         ....|++|+.++...
T Consensus       213 ---l~~aDiVv~~ts~~~  227 (340)
T PRK14982        213 ---LPEADIVVWVASMPK  227 (340)
T ss_pred             ---HccCCEEEECCcCCc
Confidence               246899999998754

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.82  E-value=8e-05  Score=67.52  Aligned_cols=86  Identities=21%  Similarity=0.241  Sum_probs=72.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHH----CCCEEEEEecCchhhHHHHHHHHhcCCC-CcceeEEEeccCcHHHHHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLAS----KGITVVLTARDEKRGLEAVEKLKASGVD-PELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~----~G~~Vii~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      --++|-||||.-|.-++.++++    .|..+.+.+||++++.+.++++....+. -....++.||.+|++++.+.++   
T Consensus         6 yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak---   82 (423)
T KOG2733|consen    6 YDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK---   82 (423)
T ss_pred             eeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh---
Confidence            3589999999999999999999    7889999999999999999988865432 1223388899999999999887   


Q ss_pred             HhcCCccEEEEccccCCc
Q 022357           82 TQFGKLDILANNAGIASV   99 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~   99 (298)
                          +..+|+||+|....
T Consensus        83 ----~~~vivN~vGPyR~   96 (423)
T KOG2733|consen   83 ----QARVIVNCVGPYRF   96 (423)
T ss_pred             ----hhEEEEecccccee
Confidence                45899999997654

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.80  E-value=5.4e-05  Score=69.44  Aligned_cols=79  Identities=11%  Similarity=0.063  Sum_probs=48.5

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCC-------CEEEEEecCchh--hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKG-------ITVVLTARDEKR--GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G-------~~Vii~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      -+++||||+|.||.+++..|+.++       .+|+++++++..  +.....++...      ...+..|++...+..+.+
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~------~~~~~~~~~~~~~~~~~l   76 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC------AFPLLKSVVATTDPEEAF   76 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc------cccccCCceecCCHHHHh
Confidence            369999999999999999999844       589999996531  22211111110      001112333223322222


Q ss_pred             HHHHHhcCCccEEEEccccCC
Q 022357           78 DFIKTQFGKLDILANNAGIAS   98 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~~   98 (298)
                             ...|+|||.||...
T Consensus        77 -------~~aDiVI~tAG~~~   90 (325)
T cd01336          77 -------KDVDVAILVGAMPR   90 (325)
T ss_pred             -------CCCCEEEEeCCcCC
Confidence                   37899999999864

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.78  E-value=0.00012  Score=66.88  Aligned_cols=119  Identities=15%  Similarity=0.036  Sum_probs=72.6

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++.+++.|+|++|.||..++..|+.++  .++++++++  .....+..+.....     .....+.++..+..+.++   
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~-----~~~v~~~td~~~~~~~l~---   75 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDT-----PAKVTGYADGELWEKALR---   75 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCc-----CceEEEecCCCchHHHhC---
Confidence            456789999999999999999999654  589999983  23333334433221     112334555444333332   


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                          ..|+||++||.....                             -..+...+..|+...-    .+.+.|++....
T Consensus        76 ----gaDvVVitaG~~~~~-----------------------------~~tR~dll~~N~~i~~----~i~~~i~~~~~~  118 (321)
T PTZ00325         76 ----GADLVLICAGVPRKP-----------------------------GMTRDDLFNTNAPIVR----DLVAAVASSAPK  118 (321)
T ss_pred             ----CCCEEEECCCCCCCC-----------------------------CCCHHHHHHHHHHHHH----HHHHHHHHHCCC
Confidence                689999999975321                             1123345667765554    444444444556


Q ss_pred             cEEEEccC
Q 022357          162 RLVNLSSY  169 (298)
Q Consensus       162 ~iv~vsS~  169 (298)
                      ++|+++|.
T Consensus       119 ~iviv~SN  126 (321)
T PTZ00325        119 AIVGIVSN  126 (321)
T ss_pred             eEEEEecC
Confidence            78887773

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.64  E-value=0.00072  Score=64.69  Aligned_cols=81  Identities=20%  Similarity=0.264  Sum_probs=55.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++.+|+++|||+++ +|.++|+.|+++|++|++.+++........+++...+     +.++...  +..++   .+    
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g-----~~~~~~~--~~~~~---~~----   66 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEG-----IKVICGS--HPLEL---LD----   66 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcC-----CEEEeCC--CCHHH---hc----
Confidence            46789999999976 9999999999999999999987654444445555443     2222111  11111   11    


Q ss_pred             hcCCccEEEEccccCCcc
Q 022357           83 QFGKLDILANNAGIASVK  100 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~  100 (298)
                        ..+|+||+++|+....
T Consensus        67 --~~~d~vV~s~gi~~~~   82 (447)
T PRK02472         67 --EDFDLMVKNPGIPYTN   82 (447)
T ss_pred             --CcCCEEEECCCCCCCC
Confidence              1489999999987544

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.62  E-value=0.00091  Score=57.30  Aligned_cols=165  Identities=16%  Similarity=0.142  Sum_probs=97.2

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC---EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI---TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~---~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ++++|||++|-+|+++.+.+..+|.   +.+..+..                        .+|+++..+.+++++..   
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk------------------------d~DLt~~a~t~~lF~~e---   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK------------------------DADLTNLADTRALFESE---   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc------------------------cccccchHHHHHHHhcc---
Confidence            6899999999999999999999875   22222211                        37999999999998765   


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        ++-.|||.|+..+--...-                      ....    ..+..|+.-.-++++.+..+    +-.++
T Consensus        55 --kPthVIhlAAmVGGlf~N~----------------------~ynl----dF~r~Nl~indNVlhsa~e~----gv~K~  102 (315)
T KOG1431|consen   55 --KPTHVIHLAAMVGGLFHNN----------------------TYNL----DFIRKNLQINDNVLHSAHEH----GVKKV  102 (315)
T ss_pred             --CCceeeehHhhhcchhhcC----------------------CCch----HHHhhcceechhHHHHHHHh----chhhh
Confidence              6778888886543211100                      0112    23445555455556655542    22355


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      |+..|..=.....++           -.+               ..-+..+.+.+..--|+-+|..+.-..++.+.++ |
T Consensus       103 vsclStCIfPdkt~y-----------PId---------------Etmvh~gpphpsN~gYsyAKr~idv~n~aY~~qh-g  155 (315)
T KOG1431|consen  103 VSCLSTCIFPDKTSY-----------PID---------------ETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQH-G  155 (315)
T ss_pred             hhhcceeecCCCCCC-----------CCC---------------HHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHh-C
Confidence            555443221111000           000               0112333455667789999988887778888886 4


Q ss_pred             cEEEEeeCCeeecC
Q 022357          244 FCVNCVCPGFVKTD  257 (298)
Q Consensus       244 i~vn~v~PG~v~t~  257 (298)
                      -...++.|-=+..|
T Consensus       156 ~~~tsviPtNvfGp  169 (315)
T KOG1431|consen  156 RDYTSVIPTNVFGP  169 (315)
T ss_pred             CceeeeccccccCC
Confidence            44555555444443

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.53  E-value=0.00051  Score=61.36  Aligned_cols=74  Identities=15%  Similarity=0.312  Sum_probs=54.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+|+++|+|+ ||+|++++..|++.|++|.+.+|+.++.+++.+++...+.    ......|     +.         ..
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~----~~~~~~~-----~~---------~~  176 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGE----IQAFSMD-----EL---------PL  176 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCc----eEEechh-----hh---------cc
Confidence            4789999999 7999999999999999999999998888877777654321    2222111     10         11


Q ss_pred             CCccEEEEccccC
Q 022357           85 GKLDILANNAGIA   97 (298)
Q Consensus        85 g~id~lv~nAg~~   97 (298)
                      ...|+||++.+..
T Consensus       177 ~~~DivInatp~g  189 (270)
T TIGR00507       177 HRVDLIINATSAG  189 (270)
T ss_pred             cCccEEEECCCCC
Confidence            3689999999764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.51  E-value=0.00054  Score=55.54  Aligned_cols=75  Identities=19%  Similarity=0.319  Sum_probs=54.4

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +.+++++|+|+ |++|+++++.|++.| ++|++.+|+.++..+..+++....        +..+.++..++         
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~~---------   78 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG--------IAIAYLDLEEL---------   78 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc--------cceeecchhhc---------
Confidence            45689999998 899999999999996 789999999887777666654321        12233333322         


Q ss_pred             hcCCccEEEEccccC
Q 022357           83 QFGKLDILANNAGIA   97 (298)
Q Consensus        83 ~~g~id~lv~nAg~~   97 (298)
                       ....|+||++....
T Consensus        79 -~~~~Dvvi~~~~~~   92 (155)
T cd01065          79 -LAEADLIINTTPVG   92 (155)
T ss_pred             -cccCCEEEeCcCCC
Confidence             23789999998754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.50  E-value=0.001  Score=54.90  Aligned_cols=79  Identities=16%  Similarity=0.122  Sum_probs=57.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +++.++|.||||-.|+.+.+++++.+-  +|+++.|.+.-..+.        .+  .+.-...|.+..++.....+    
T Consensus        17 q~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at--------~k--~v~q~~vDf~Kl~~~a~~~q----   82 (238)
T KOG4039|consen   17 QNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT--------DK--VVAQVEVDFSKLSQLATNEQ----   82 (238)
T ss_pred             hccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc--------cc--eeeeEEechHHHHHHHhhhc----
Confidence            467899999999999999999999874  799988874221111        11  15556677777666554443    


Q ss_pred             hcCCccEEEEccccCCcc
Q 022357           83 QFGKLDILANNAGIASVK  100 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~  100 (298)
                         ..|+++|+-|...-.
T Consensus        83 ---g~dV~FcaLgTTRgk   97 (238)
T KOG4039|consen   83 ---GPDVLFCALGTTRGK   97 (238)
T ss_pred             ---CCceEEEeecccccc
Confidence               789999999876543

>cd00704 MDH Malate dehydrogenase

Probab=97.46  E-value=0.00075  Score=61.85  Aligned_cols=74  Identities=18%  Similarity=0.187  Sum_probs=48.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecCc--hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHH--H--
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDE--KRGLEAVEKLKASGVDPELLLFHQLDISDLASV--S--   74 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~-------~Vii~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v--~--   74 (298)
                      ++.||||+|.||..++..|+.+|.       .+++.++++  +.                 ......|+.+....  .  
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~-----------------~~g~~~Dl~d~~~~~~~~~   64 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKA-----------------LEGVVMELQDCAFPLLKGV   64 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCc-----------------cceeeeehhhhcccccCCc
Confidence            589999999999999999998653       589999886  33                 33344444444100  0  


Q ss_pred             HHHHHHHHhcCCccEEEEccccCC
Q 022357           75 SLADFIKTQFGKLDILANNAGIAS   98 (298)
Q Consensus        75 ~~~~~~~~~~g~id~lv~nAg~~~   98 (298)
                      .+.....+.+...|++|+.||...
T Consensus        65 ~i~~~~~~~~~~aDiVVitAG~~~   88 (323)
T cd00704          65 VITTDPEEAFKDVDVAILVGAFPR   88 (323)
T ss_pred             EEecChHHHhCCCCEEEEeCCCCC
Confidence            000112223347899999999753

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.45  E-value=0.00019  Score=61.64  Aligned_cols=167  Identities=17%  Similarity=0.139  Sum_probs=101.8

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHC-CC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASK-GI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~-G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ..++||||+-|.+|..+|..|-.+ |- .|++.+--......         ..+  --++-.|+-|..++++++-.    
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V---------~~~--GPyIy~DILD~K~L~eIVVn----  108 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV---------TDV--GPYIYLDILDQKSLEEIVVN----  108 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh---------ccc--CCchhhhhhccccHHHhhcc----
Confidence            368999999999999999988875 65 46665532221000         000  22456788888888877642    


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                       .+||-+||-.+..+.-                            ......-..++|+.|.-++++....+     +-+|
T Consensus       109 -~RIdWL~HfSALLSAv----------------------------GE~NVpLA~~VNI~GvHNil~vAa~~-----kL~i  154 (366)
T KOG2774|consen  109 -KRIDWLVHFSALLSAV----------------------------GETNVPLALQVNIRGVHNILQVAAKH-----KLKV  154 (366)
T ss_pred             -cccceeeeHHHHHHHh----------------------------cccCCceeeeecchhhhHHHHHHHHc-----CeeE
Confidence             3899999987654321                            11112234789999999988877553     2344


Q ss_pred             EEEccCcccccCCc--hHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          164 VNLSSYVSALKDLP--EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      .+-|.+.+..+.-|  +++                                +...-.....|+.||.-.+.+-+.+..++
T Consensus       155 FVPSTIGAFGPtSPRNPTP--------------------------------dltIQRPRTIYGVSKVHAEL~GEy~~hrF  202 (366)
T KOG2774|consen  155 FVPSTIGAFGPTSPRNPTP--------------------------------DLTIQRPRTIYGVSKVHAELLGEYFNHRF  202 (366)
T ss_pred             eecccccccCCCCCCCCCC--------------------------------CeeeecCceeechhHHHHHHHHHHHHhhc
Confidence            44444444433211  111                                11111347899999998888887777765


Q ss_pred             CCcEEEEee-CCee
Q 022357          242 PKFCVNCVC-PGFV  254 (298)
Q Consensus       242 ~~i~vn~v~-PG~v  254 (298)
                       ++.+.+.. ||.+
T Consensus       203 -g~dfr~~rfPg~i  215 (366)
T KOG2774|consen  203 -GVDFRSMRFPGII  215 (366)
T ss_pred             -CccceecccCccc
Confidence             44444432 5544

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.42  E-value=0.00026  Score=59.59  Aligned_cols=81  Identities=12%  Similarity=0.132  Sum_probs=48.5

Q ss_pred             CCCcEEEEeCC----------------CCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEecc
Q 022357            4 ATKKYAVVTGS----------------NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI   67 (298)
Q Consensus         4 ~~~~~vlITGa----------------s~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl   67 (298)
                      |.||+||||+|                ||-.|.++|.++..+|++|+++..... +..       ..    .+..  .++
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~-------p~----~~~~--i~v   66 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP-------PP----GVKV--IRV   66 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS------------T----TEEE--EE-
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc-------cc----cceE--EEe
Confidence            56899999986                688999999999999999998876632 110       10    1433  345


Q ss_pred             CcHHHHHHHHHHHHHhcCCccEEEEccccCCccc
Q 022357           68 SDLASVSSLADFIKTQFGKLDILANNAGIASVKF  101 (298)
Q Consensus        68 s~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~  101 (298)
                      .+.+++.+.+.   +.+..-|++|++|++.-..+
T Consensus        67 ~sa~em~~~~~---~~~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   67 ESAEEMLEAVK---ELLPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             SSHHHHHHHHH---HHGGGGSEEEE-SB--SEEE
T ss_pred             cchhhhhhhhc---cccCcceeEEEecchhheee
Confidence            55555555444   33445699999999876543

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK06849 hypothetical protein; Provisional

Probab=97.27  E-value=0.0028  Score=59.56  Aligned_cols=83  Identities=18%  Similarity=0.115  Sum_probs=53.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +.++|||||++..+|..+++.|.++|++|++++.++............       ...+...-.+.+...+.+..+.++.
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~-------~~~~p~p~~d~~~~~~~L~~i~~~~   75 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVDG-------FYTIPSPRWDPDAYIQALLSIVQRE   75 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhh-------eEEeCCCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999886543221111111       2222212233433333333444443


Q ss_pred             CCccEEEEccc
Q 022357           85 GKLDILANNAG   95 (298)
Q Consensus        85 g~id~lv~nAg   95 (298)
                       ++|+||....
T Consensus        76 -~id~vIP~~e   85 (389)
T PRK06849         76 -NIDLLIPTCE   85 (389)
T ss_pred             -CCCEEEECCh
Confidence             5899998775

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.20  E-value=0.00049  Score=58.71  Aligned_cols=46  Identities=20%  Similarity=0.309  Sum_probs=39.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK   49 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~   49 (298)
                      ++++|+++|+|. |.+|+.+++.|.+.|++|++.+++.+++....+.
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            467899999999 4899999999999999999999987766665544

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK05086 malate dehydrogenase; Provisional

Probab=97.19  E-value=0.00079  Score=61.46  Aligned_cols=35  Identities=23%  Similarity=0.210  Sum_probs=28.5

Q ss_pred             cEEEEeCCCCchhHHHHHHHHH---CCCEEEEEecCch
Q 022357            7 KYAVVTGSNKGIGFETVRQLAS---KGITVVLTARDEK   41 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~---~G~~Vii~~r~~~   41 (298)
                      ++++|.||+|+||++++..|..   .++.+++.+|++.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~   38 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV   38 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence            4689999999999999998865   2457888888743

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.07  E-value=0.0024  Score=58.61  Aligned_cols=76  Identities=17%  Similarity=0.149  Sum_probs=48.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHH-H-HH-
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVS-S-LA-   77 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~-------~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~-~-~~-   77 (298)
                      ++.|+|++|.+|..++..|+.+|.       .+++.++++...               .......|+.+..... . .. 
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~---------------~a~g~~~Dl~d~~~~~~~~~~~   65 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK---------------VLEGVVMELMDCAFPLLDGVVP   65 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc---------------ccceeEeehhcccchhcCceec
Confidence            478999999999999999998554       589999865420               0233445555544110 0 00 


Q ss_pred             -HHHHHhcCCccEEEEccccCC
Q 022357           78 -DFIKTQFGKLDILANNAGIAS   98 (298)
Q Consensus        78 -~~~~~~~g~id~lv~nAg~~~   98 (298)
                       ....+.+...|++|+.||...
T Consensus        66 ~~~~~~~~~~aDiVVitAG~~~   87 (324)
T TIGR01758        66 THDPAVAFTDVDVAILVGAFPR   87 (324)
T ss_pred             cCChHHHhCCCCEEEEcCCCCC
Confidence             011223347899999999753

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.07  E-value=0.0013  Score=59.04  Aligned_cols=47  Identities=17%  Similarity=0.241  Sum_probs=41.7

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLK   51 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~~~~~   51 (298)
                      +.+++++|+|+ ||+|++++..|++.| .+|++.+|+.++.+++.+++.
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            56789999997 999999999999999 789999999988877777665

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.07  E-value=0.0066  Score=55.50  Aligned_cols=83  Identities=17%  Similarity=0.211  Sum_probs=59.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      |+.-.++++.|+|+ |.+|.+++..|+..|.  ++++.+++++.++..+.++.....-...+....   .+.   +.   
T Consensus         1 ~~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~---~~---   70 (315)
T PRK00066          1 MMKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDY---SD---   70 (315)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCH---HH---
Confidence            55666789999998 9999999999999887  799999999888888888875431101122221   121   11   


Q ss_pred             HHHHhcCCccEEEEccccCC
Q 022357           79 FIKTQFGKLDILANNAGIAS   98 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~   98 (298)
                           +..-|++|..||...
T Consensus        71 -----~~~adivIitag~~~   85 (315)
T PRK00066         71 -----CKDADLVVITAGAPQ   85 (315)
T ss_pred             -----hCCCCEEEEecCCCC
Confidence                 126799999999753

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.06  E-value=0.0053  Score=49.31  Aligned_cols=77  Identities=19%  Similarity=0.281  Sum_probs=54.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCC-CCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++.|.|++|.+|.+++..|...+  .++++.+++++.++..+.++..... .........   .+.++           +
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~-----------~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA-----------L   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc-----------c
Confidence            68999999999999999999985  4799999998887777777764311 111122222   22222           1


Q ss_pred             CCccEEEEccccCC
Q 022357           85 GKLDILANNAGIAS   98 (298)
Q Consensus        85 g~id~lv~nAg~~~   98 (298)
                      ...|++|..||...
T Consensus        68 ~~aDivvitag~~~   81 (141)
T PF00056_consen   68 KDADIVVITAGVPR   81 (141)
T ss_dssp             TTESEEEETTSTSS
T ss_pred             ccccEEEEeccccc
Confidence            26799999999753

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.05  E-value=0.009  Score=57.95  Aligned_cols=84  Identities=18%  Similarity=0.210  Sum_probs=54.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH-------------H
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-------------A   71 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-------------~   71 (298)
                      .+.+|+|+|+ |.+|...+.-+...|++|+++++++++++... ++   +     ..++..|..+.             +
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-sl---G-----A~~v~i~~~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SM---G-----AEFLELDFEEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---C-----CeEEEeccccccccccchhhhcchh
Confidence            4679999998 89999999999999999999999887644332 22   3     22232333221             1


Q ss_pred             HHHHHHHHHHHhcCCccEEEEccccCC
Q 022357           72 SVSSLADFIKTQFGKLDILANNAGIAS   98 (298)
Q Consensus        72 ~v~~~~~~~~~~~g~id~lv~nAg~~~   98 (298)
                      ..++..+.+.+..+..|++|.++|...
T Consensus       234 ~~~~~~~~~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        234 FIKAEMALFAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             HHHHHHHHHHhccCCCCEEEECCCCCc
Confidence            112222222233357999999999754

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.04  E-value=0.0068  Score=56.70  Aligned_cols=77  Identities=13%  Similarity=0.102  Sum_probs=52.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+++++|.|+ |.+|+.+++.+...|++|++.+|+.++++.....+    +.     .+..+..+.+.+.+.+      
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~----g~-----~v~~~~~~~~~l~~~l------  228 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF----GG-----RIHTRYSNAYEIEDAV------  228 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc----Cc-----eeEeccCCHHHHHHHH------
Confidence            35567899988 89999999999999999999999876654433322    11     1223444555544443      


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                       ...|++|+++++.
T Consensus       229 -~~aDvVI~a~~~~  241 (370)
T TIGR00518       229 -KRADLLIGAVLIP  241 (370)
T ss_pred             -ccCCEEEEccccC
Confidence             3679999988653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.03  E-value=0.0026  Score=55.27  Aligned_cols=76  Identities=22%  Similarity=0.243  Sum_probs=59.1

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++++|.|+ |-+|+.+|+.|.+.|++|++++++++..++......       ....+.+|-++.+.++++-      ...
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~-------~~~~v~gd~t~~~~L~~ag------i~~   66 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADEL-------DTHVVIGDATDEDVLEEAG------IDD   66 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhc-------ceEEEEecCCCHHHHHhcC------CCc
Confidence            45777777 889999999999999999999999887666443211       1788999999998877762      126


Q ss_pred             ccEEEEcccc
Q 022357           87 LDILANNAGI   96 (298)
Q Consensus        87 id~lv~nAg~   96 (298)
                      .|++|...|-
T Consensus        67 aD~vva~t~~   76 (225)
T COG0569          67 ADAVVAATGN   76 (225)
T ss_pred             CCEEEEeeCC
Confidence            7888887764

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.03  E-value=0.0013  Score=64.47  Aligned_cols=46  Identities=28%  Similarity=0.344  Sum_probs=40.4

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL   50 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~   50 (298)
                      +.+|+++|+|+ ||+|++++..|+++|++|++++|+.++.+.+.+++
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            56789999999 69999999999999999999999987777766654

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.98  E-value=0.0046  Score=56.01  Aligned_cols=80  Identities=23%  Similarity=0.322  Sum_probs=55.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++++|+|+++++|.+++..+...|++|++++++.++...+    ...+..      ..+|..+.+..+.+.+....  
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~~~~------~~~~~~~~~~~~~~~~~~~~--  233 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA----KELGAD------YVIDYRKEDFVREVRELTGK--  233 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCC------eEEecCChHHHHHHHHHhCC--
Confidence            467999999999999999999999999999999887654332    222211      12355555555544433221  


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      ..+|++++++|.
T Consensus       234 ~~~d~~i~~~g~  245 (342)
T cd08266         234 RGVDVVVEHVGA  245 (342)
T ss_pred             CCCcEEEECCcH
Confidence            369999999874

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.97  E-value=0.0033  Score=56.55  Aligned_cols=48  Identities=21%  Similarity=0.212  Sum_probs=41.7

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKA   52 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~   52 (298)
                      +.+++++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+++++.+..
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~  171 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQ  171 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhh
Confidence            56789999987 9999999999999997 699999999888888777653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.94  E-value=0.0057  Score=55.08  Aligned_cols=49  Identities=22%  Similarity=0.331  Sum_probs=43.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhc
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKAS   53 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~   53 (298)
                      ..+++++|.|+ ||.|++++..|++.|+ +|++++|+.++.+.+.+.+...
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~  174 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR  174 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence            45789999998 8899999999999998 7999999999888888887653

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.93  E-value=0.0024  Score=57.66  Aligned_cols=84  Identities=18%  Similarity=0.201  Sum_probs=64.6

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |.+..-..++|-||+|..|.-+|.+|+++|.+-.+.+||..++..+...+...      ...+++++  +..+++.++  
T Consensus         1 ~~~e~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~------~~~~p~~~--p~~~~~~~~--   70 (382)
T COG3268           1 MPMEREYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPE------AAVFPLGV--PAALEAMAS--   70 (382)
T ss_pred             CCCCcceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcc------ccccCCCC--HHHHHHHHh--
Confidence            45555568999999999999999999999999999999999888877776532      33334433  555555544  


Q ss_pred             HHhcCCccEEEEccccCCc
Q 022357           81 KTQFGKLDILANNAGIASV   99 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~   99 (298)
                           ..++|+||+|....
T Consensus        71 -----~~~VVlncvGPyt~   84 (382)
T COG3268          71 -----RTQVVLNCVGPYTR   84 (382)
T ss_pred             -----cceEEEeccccccc
Confidence                 67999999998754

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.89  E-value=0.0064  Score=54.71  Aligned_cols=48  Identities=19%  Similarity=0.325  Sum_probs=41.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKA   52 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~   52 (298)
                      ..+|+++|.|+ ||-|++++..|++.|+ +|++..|+.++.+++.+.+..
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~  173 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN  173 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence            45789999998 9999999999999997 689999999888888877654

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.88  E-value=0.015  Score=52.88  Aligned_cols=77  Identities=19%  Similarity=0.262  Sum_probs=53.2

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCC-CCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++.|.|+ |++|++++..|+..|  .+|++.+++++..+.....+..... .........   .+.++           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH-----------
Confidence            36888896 999999999999999  5899999999888777777764321 000112211   12211           


Q ss_pred             cCCccEEEEccccCC
Q 022357           84 FGKLDILANNAGIAS   98 (298)
Q Consensus        84 ~g~id~lv~nAg~~~   98 (298)
                      ....|++|+++|...
T Consensus        66 l~~aDIVIitag~~~   80 (306)
T cd05291          66 CKDADIVVITAGAPQ   80 (306)
T ss_pred             hCCCCEEEEccCCCC
Confidence            136899999999753

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.88  E-value=0.004  Score=55.88  Aligned_cols=76  Identities=21%  Similarity=0.346  Sum_probs=56.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+++++|.|| ||-+++++..|++.|. +|+++.|+.++++++++.+...+..   +  ...+..+.+..+         
T Consensus       125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~---~--~~~~~~~~~~~~---------  189 (283)
T COG0169         125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAA---V--EAAALADLEGLE---------  189 (283)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccc---c--cccccccccccc---------
Confidence            4688999998 8999999999999995 7999999999999999888865431   1  112222222211         


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                        ..|++||+....
T Consensus       190 --~~dliINaTp~G  201 (283)
T COG0169         190 --EADLLINATPVG  201 (283)
T ss_pred             --ccCEEEECCCCC
Confidence              469999998654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.87  E-value=0.014  Score=66.57  Aligned_cols=180  Identities=12%  Similarity=0.026  Sum_probs=104.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++.++|++.+++++.+++.+|.++|++|+++..... ...   .......   .+..+.+.--+..++..+++.+....
T Consensus      1754 ~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 1826 (2582)
T TIGR02813      1754 SGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSH---SASPLAS---AIASVTLGTIDDTSIEAVIKDIEEKT 1826 (2582)
T ss_pred             cCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-ccc---ccccccc---ccccccccccchHHHHHHHHhhhccc
Confidence            4677888888899999999999999999987742211 000   0000000   12233444445567777777777767


Q ss_pred             CCccEEEEccccCCcccc-cccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           85 GKLDILANNAGIASVKFD-MDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      +.++.+||..+....... .+.                        . ...+.-...+...|.+.|.+.+.+...+.+.+
T Consensus      1827 ~~~~g~i~l~~~~~~~~~~~~~------------------------~-~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~ 1881 (2582)
T TIGR02813      1827 AQIDGFIHLQPQHKSVADKVDA------------------------I-ELPEAAKQSLMLAFLFAKLLNVKLATNARASF 1881 (2582)
T ss_pred             cccceEEEeccccccccccccc------------------------c-ccchhhHHHHHHHHHHHHhhchhhccCCCeEE
Confidence            789999998775432100 000                        0 00000112234467788887777665555688


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCc-hhhhHHHHHHHHHHHHHHhCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSS-AYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~al~~l~~~la~e~~  242 (298)
                      +.+|...|-.+....                                   ........ --....+++.+|+|+++.|||
T Consensus      1882 ~~vsr~~G~~g~~~~-----------------------------------~~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P 1926 (2582)
T TIGR02813      1882 VTVSRIDGGFGYSNG-----------------------------------DADSGTQQVKAELNQAALAGLTKTLNHEWN 1926 (2582)
T ss_pred             EEEEecCCccccCCc-----------------------------------cccccccccccchhhhhHHHHHHhHHHHCC
Confidence            888887765442100                                   00000000 012357899999999999999


Q ss_pred             CcEEEEeeC
Q 022357          243 KFCVNCVCP  251 (298)
Q Consensus       243 ~i~vn~v~P  251 (298)
                      ++.+..|.-
T Consensus      1927 ~~~~r~vDl 1935 (2582)
T TIGR02813      1927 AVFCRALDL 1935 (2582)
T ss_pred             CCeEEEEeC
Confidence            877665554

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.85  E-value=0.0043  Score=55.64  Aligned_cols=80  Identities=14%  Similarity=0.158  Sum_probs=54.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++++|+|+++++|.++++.+...|++|++++++.++.+.. .   ..+.+      ..+|..+.+..+.+.+.. . .
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~~g~~------~~~~~~~~~~~~~~~~~~-~-~  211 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-R---QAGAD------AVFNYRAEDLADRILAAT-A-G  211 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---HcCCC------EEEeCCCcCHHHHHHHHc-C-C
Confidence            578999999999999999999999999999999987654433 2   22211      123445444444433222 1 1


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      ..+|.+++++|.
T Consensus       212 ~~~d~vi~~~~~  223 (325)
T cd08253         212 QGVDVIIEVLAN  223 (325)
T ss_pred             CceEEEEECCch
Confidence            369999999874

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.81  E-value=0.011  Score=54.70  Aligned_cols=82  Identities=17%  Similarity=0.335  Sum_probs=56.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc---------------------hhhHHHHHHHHhcCCCCccee
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE---------------------KRGLEAVEKLKASGVDPELLL   61 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~---------------------~~~~~~~~~~~~~~~~~~~~~   61 (298)
                      +++++|+|.|+ ||+|..++..|+..|. ++.+++++.                     .+.+...+.++..... -.+.
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~-v~i~   99 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSE-VEIV   99 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCC-cEEE
Confidence            56788999998 8899999999999998 788898863                     2344455566654332 2366


Q ss_pred             EEEeccCcHHHHHHHHHHHHHhcCCccEEEEccc
Q 022357           62 FHQLDISDLASVSSLADFIKTQFGKLDILANNAG   95 (298)
Q Consensus        62 ~~~~Dls~~~~v~~~~~~~~~~~g~id~lv~nAg   95 (298)
                      .+..|++. +.++.++       ...|++|.+..
T Consensus       100 ~~~~~~~~-~~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475        100 PVVTDVTV-EELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             EEeccCCH-HHHHHHh-------cCCCEEEEcCC
Confidence            66667753 3444443       26788888764

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.79  E-value=0.0055  Score=58.11  Aligned_cols=77  Identities=14%  Similarity=0.218  Sum_probs=56.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+.+++++|.|+ ||.|+.++..|+++|. +++++.|+.++...+.+++..       ...     ...+++...+    
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~-------~~~-----~~~~~l~~~l----  240 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN-------ASA-----HYLSELPQLI----  240 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC-------CeE-----ecHHHHHHHh----
Confidence            467899999999 9999999999999996 699999998877776665431       111     1223333333    


Q ss_pred             HhcCCccEEEEccccCCc
Q 022357           82 TQFGKLDILANNAGIASV   99 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~   99 (298)
                         ...|+||++.+...+
T Consensus       241 ---~~aDiVI~aT~a~~~  255 (414)
T PRK13940        241 ---KKADIIIAAVNVLEY  255 (414)
T ss_pred             ---ccCCEEEECcCCCCe
Confidence               368999999987554

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.77  E-value=0.0058  Score=56.05  Aligned_cols=81  Identities=19%  Similarity=0.156  Sum_probs=51.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .|.+++|+||+|++|..++..+...|++|+.++++.++.+...+.+   +.+    .+  .|..+.++..+.+..+..  
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~----~v--i~~~~~~~~~~~i~~~~~--  219 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFD----DA--FNYKEEPDLDAALKRYFP--  219 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCc----ee--EEcCCcccHHHHHHHhCC--
Confidence            4689999999999999988777678999999998876544443222   211    11  222222233333333221  


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|+++.+.|.
T Consensus       220 ~gvd~v~d~~g~  231 (338)
T cd08295         220 NGIDIYFDNVGG  231 (338)
T ss_pred             CCcEEEEECCCH
Confidence            369999998873

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.75  E-value=0.0094  Score=50.91  Aligned_cols=83  Identities=17%  Similarity=0.284  Sum_probs=54.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhhHHHHHHHHhcCCCCcceeE
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLF   62 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   62 (298)
                      .+.+++|+|.|+ ||+|.++++.|+..|. ++.+.+.+.                   .+.+...+.++...... .+..
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v-~i~~   95 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDI-QVTA   95 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCC-EEEE
Confidence            356788999986 8999999999999997 799988762                   23444555565543321 2444


Q ss_pred             EEeccCcHHHHHHHHHHHHHhcCCccEEEEccc
Q 022357           63 HQLDISDLASVSSLADFIKTQFGKLDILANNAG   95 (298)
Q Consensus        63 ~~~Dls~~~~v~~~~~~~~~~~g~id~lv~nAg   95 (298)
                      +..++.. +++.+++       ...|++|.+..
T Consensus        96 ~~~~i~~-~~~~~~~-------~~~D~Vi~~~d  120 (202)
T TIGR02356        96 LKERVTA-ENLELLI-------NNVDLVLDCTD  120 (202)
T ss_pred             ehhcCCH-HHHHHHH-------hCCCEEEECCC
Confidence            4444432 3333333       36899988864

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.71  E-value=0.0039  Score=55.23  Aligned_cols=77  Identities=13%  Similarity=0.119  Sum_probs=54.9

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++++|+|||+- |+.++.+|.++|++|++..++........    ..+     ...+..+.-+.+++.+++.+-     .
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~~g-----~~~v~~g~l~~~~l~~~l~~~-----~   65 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----IHQ-----ALTVHTGALDPQELREFLKRH-----S   65 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----ccC-----CceEEECCCCHHHHHHHHHhc-----C
Confidence            36999999998 99999999999999999998875422221    111     223445566677766666432     7


Q ss_pred             ccEEEEccccCC
Q 022357           87 LDILANNAGIAS   98 (298)
Q Consensus        87 id~lv~nAg~~~   98 (298)
                      +|+||..+..+.
T Consensus        66 i~~VIDAtHPfA   77 (256)
T TIGR00715        66 IDILVDATHPFA   77 (256)
T ss_pred             CCEEEEcCCHHH
Confidence            999999886544

This enzyme was found to be a monomer by gel filtration.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.69  E-value=0.0058  Score=56.04  Aligned_cols=156  Identities=15%  Similarity=0.064  Sum_probs=91.8

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecCchh--hHHHHHHHHhcCCC-CcceeEEEeccCcHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDEKR--GLEAVEKLKASGVD-PELLLFHQLDISDLASVSS   75 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~-------~Vii~~r~~~~--~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~v~~   75 (298)
                      .+++.|+|++|.||..++..|+.+|.       ++++.+.++..  +...+..+...... ...+.     ++. ++-  
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~~-~~~--   73 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-----ITD-DPN--   73 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-----Eec-CcH--
Confidence            35899999999999999999998875       79999985432  45555555432110 00011     111 111  


Q ss_pred             HHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhh
Q 022357           76 LADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL  155 (298)
Q Consensus        76 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  155 (298)
                            +.+..-|++|..||....+.                          ++.   .+.+..|+    .+++.+.+.+
T Consensus        74 ------~~~~daDivvitaG~~~k~g--------------------------~tR---~dll~~N~----~i~~~i~~~i  114 (322)
T cd01338          74 ------VAFKDADWALLVGAKPRGPG--------------------------MER---ADLLKANG----KIFTAQGKAL  114 (322)
T ss_pred             ------HHhCCCCEEEEeCCCCCCCC--------------------------CcH---HHHHHHHH----HHHHHHHHHH
Confidence                  11236799999999753210                          111   13344454    5667777777


Q ss_pred             ccCC--CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHH
Q 022357          156 ELSD--SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAY  233 (298)
Q Consensus       156 ~~~~--~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l  233 (298)
                      .+..  .+.++++|-..-....                       ..   ..       ..+.++....|+.++.--.-|
T Consensus       115 ~~~~~~~~iiivvsNPvD~~t~-----------------------~~---~k-------~sg~~p~~~ViG~t~LDs~Rl  161 (322)
T cd01338         115 NDVASRDVKVLVVGNPCNTNAL-----------------------IA---MK-------NAPDIPPDNFTAMTRLDHNRA  161 (322)
T ss_pred             HhhCCCCeEEEEecCcHHHHHH-----------------------HH---HH-------HcCCCChHheEEehHHHHHHH
Confidence            6543  5666666642211100                       00   00       011235567899999998899


Q ss_pred             HHHHHHhC
Q 022357          234 TRILAKRY  241 (298)
Q Consensus       234 ~~~la~e~  241 (298)
                      ...++..+
T Consensus       162 ~~~la~~l  169 (322)
T cd01338         162 KSQLAKKA  169 (322)
T ss_pred             HHHHHHHh
Confidence            99999887

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.67  E-value=0.0094  Score=53.27  Aligned_cols=80  Identities=15%  Similarity=0.251  Sum_probs=53.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++++|+|++++||..++..+...|++|++++++.++.+.. .+   .+.+      ..+|..+.+..+.+.+ .... 
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~g~~------~~~~~~~~~~~~~~~~-~~~~-  206 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RA---LGAD------VAINYRTEDFAEEVKE-ATGG-  206 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HH---cCCC------EEEeCCchhHHHHHHH-HhCC-
Confidence            468999999999999999999999999999999886654433 22   2211      1233333333233222 2111 


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|.+++++|.
T Consensus       207 ~~~d~vi~~~g~  218 (323)
T cd05276         207 RGVDVILDMVGG  218 (323)
T ss_pred             CCeEEEEECCch
Confidence            369999999884

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.65  E-value=0.0098  Score=53.85  Aligned_cols=41  Identities=20%  Similarity=0.343  Sum_probs=35.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE   45 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~   45 (298)
                      .+.+++|+||++++|.++++.+...|++|+.+.++.++.+.
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~  202 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI  202 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            46789999999999999999999999999999887655333

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.61  E-value=0.0098  Score=54.66  Aligned_cols=77  Identities=19%  Similarity=0.324  Sum_probs=50.4

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +.++||+||+||+|...++-....|++++++..+.++.+    .+++.+.+    +  ..|..+.+    +.+.+.+..+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~----~~~~lGAd----~--vi~y~~~~----~~~~v~~~t~  208 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE----LLKELGAD----H--VINYREED----FVEQVRELTG  208 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH----HHHhcCCC----E--EEcCCccc----HHHHHHHHcC
Confidence            789999999999999888877778977777666654433    33444433    1  22233333    3444444333


Q ss_pred             --CccEEEEcccc
Q 022357           86 --KLDILANNAGI   96 (298)
Q Consensus        86 --~id~lv~nAg~   96 (298)
                        .+|+++..-|.
T Consensus       209 g~gvDvv~D~vG~  221 (326)
T COG0604         209 GKGVDVVLDTVGG  221 (326)
T ss_pred             CCCceEEEECCCH
Confidence              59999999885

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.60  E-value=0.016  Score=52.33  Aligned_cols=47  Identities=21%  Similarity=0.290  Sum_probs=38.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc---hhhHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE---KRGLEAVEKLK   51 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~---~~~~~~~~~~~   51 (298)
                      +.+|+++|.|+ ||-+++++..|+..|+ +|.+..|+.   ++.+.+.+.+.
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            46789999998 6779999999999997 799999995   36666666654

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.55  E-value=0.0067  Score=54.70  Aligned_cols=41  Identities=20%  Similarity=0.221  Sum_probs=36.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL   44 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~   44 (298)
                      .+.+++++|.|. |++|+++++.|...|++|++..|++++..
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~  188 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA  188 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            467899999999 77999999999999999999999876543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.53  E-value=0.031  Score=54.22  Aligned_cols=83  Identities=18%  Similarity=0.200  Sum_probs=54.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccC-------------cHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS-------------DLA   71 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls-------------~~~   71 (298)
                      .+.+++|.|+ |.+|...+..+...|+.|++.+++..+++...    ..+     ..++..|..             +.+
T Consensus       163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~----~lG-----a~~v~v~~~e~g~~~~gYa~~~s~~  232 (511)
T TIGR00561       163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ----SMG-----AEFLELDFKEEGGSGDGYAKVMSEE  232 (511)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcC-----CeEEeccccccccccccceeecCHH
Confidence            3568999997 99999999999999999999999877543322    222     233344432             123


Q ss_pred             HHHHHHHHHHHhcCCccEEEEccccC
Q 022357           72 SVSSLADFIKTQFGKLDILANNAGIA   97 (298)
Q Consensus        72 ~v~~~~~~~~~~~g~id~lv~nAg~~   97 (298)
                      ..+...+.+.+.....|++|+++-+.
T Consensus       233 ~~~~~~~~~~e~~~~~DIVI~Talip  258 (511)
T TIGR00561       233 FIAAEMELFAAQAKEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECcccC
Confidence            33333344444556899999999443

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.52  E-value=0.0098  Score=54.14  Aligned_cols=80  Identities=18%  Similarity=0.154  Sum_probs=51.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|+||+|++|..+++.+...|++|++++++.++.+..    ++.+.+    .+  .|..+.+...+.+.....  
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~----~~lGa~----~v--i~~~~~~~~~~~~~~~~~--  205 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL----KKLGFD----VA--FNYKTVKSLEETLKKASP--  205 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCC----EE--EeccccccHHHHHHHhCC--
Confidence            467999999999999998876667799999999887653333    223321    11  222332233333333311  


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|+++.+.|.
T Consensus       206 ~gvdvv~d~~G~  217 (325)
T TIGR02825       206 DGYDCYFDNVGG  217 (325)
T ss_pred             CCeEEEEECCCH
Confidence            369999998874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.51  E-value=0.013  Score=52.40  Aligned_cols=78  Identities=27%  Similarity=0.310  Sum_probs=53.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHH-CCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLAS-KGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~-~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .|.+++|++|+|.+|.- |-++++ .|++|+.++-..++..-+.+++   +.+.      ..|-...    .+.+.+.+.
T Consensus       150 ~GetvvVSaAaGaVGsv-vgQiAKlkG~rVVGiaGg~eK~~~l~~~l---GfD~------~idyk~~----d~~~~L~~a  215 (340)
T COG2130         150 AGETVVVSAAAGAVGSV-VGQIAKLKGCRVVGIAGGAEKCDFLTEEL---GFDA------GIDYKAE----DFAQALKEA  215 (340)
T ss_pred             CCCEEEEEecccccchH-HHHHHHhhCCeEEEecCCHHHHHHHHHhc---CCce------eeecCcc----cHHHHHHHH
Confidence            47899999999999965 555666 5999999987776655444433   2221      1233333    345556666


Q ss_pred             cC-CccEEEEcccc
Q 022357           84 FG-KLDILANNAGI   96 (298)
Q Consensus        84 ~g-~id~lv~nAg~   96 (298)
                      ++ .||+.+-|.|-
T Consensus       216 ~P~GIDvyfeNVGg  229 (340)
T COG2130         216 CPKGIDVYFENVGG  229 (340)
T ss_pred             CCCCeEEEEEcCCc
Confidence            66 79999999984

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.47  E-value=0.013  Score=55.70  Aligned_cols=75  Identities=17%  Similarity=0.274  Sum_probs=53.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+.+++++|.|+ |.+|+.+++.|...| .+|++.+|+.++.....+++..        ..+.     .+++.+.+.   
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~--------~~i~-----~~~l~~~l~---  239 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG--------EAVK-----FEDLEEYLA---  239 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC--------eEee-----HHHHHHHHh---
Confidence            467899999997 999999999999999 6899999998776655554321        1111     123333332   


Q ss_pred             HhcCCccEEEEccccCC
Q 022357           82 TQFGKLDILANNAGIAS   98 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~   98 (298)
                          ..|++|.+.+...
T Consensus       240 ----~aDvVi~aT~s~~  252 (417)
T TIGR01035       240 ----EADIVISSTGAPH  252 (417)
T ss_pred             ----hCCEEEECCCCCC
Confidence                5799999876544

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK14968 putative methyltransferase; Provisional

Probab=96.47  E-value=0.055  Score=44.91  Aligned_cols=79  Identities=16%  Similarity=0.106  Sum_probs=53.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++++|-.|++.|.   ++..|++++.+|+.+++++.......+.+...+..+..+.++.+|+.+.         +.+  
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~--   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG--   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc--
Confidence            56788988877775   6666777799999999998766665555554332222266777876432         111  


Q ss_pred             CCccEEEEccccC
Q 022357           85 GKLDILANNAGIA   97 (298)
Q Consensus        85 g~id~lv~nAg~~   97 (298)
                      ..+|+++.|....
T Consensus        89 ~~~d~vi~n~p~~  101 (188)
T PRK14968         89 DKFDVILFNPPYL  101 (188)
T ss_pred             cCceEEEECCCcC
Confidence            2689999987654

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.46  E-value=0.012  Score=54.36  Aligned_cols=81  Identities=17%  Similarity=0.133  Sum_probs=51.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|+||+|++|..++..+...|++|+.++++.++.+....++   +.+    ..  .|-.+.+++.+.+.....  
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~----~v--i~~~~~~~~~~~i~~~~~--  226 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD----EA--FNYKEEPDLDAALKRYFP--  226 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCC----EE--EECCCcccHHHHHHHHCC--
Confidence            4689999999999999988777778999999888776543332222   221    11  222222233333332221  


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|+++.+.|.
T Consensus       227 ~gvD~v~d~vG~  238 (348)
T PLN03154        227 EGIDIYFDNVGG  238 (348)
T ss_pred             CCcEEEEECCCH
Confidence            369999999873

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.45  E-value=0.025  Score=52.22  Aligned_cols=36  Identities=22%  Similarity=0.457  Sum_probs=32.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~   39 (298)
                      .+.+++|+|.|+ ||||..++..|+..|. ++.+++.+
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            356788999999 8999999999999998 89999886

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.41  E-value=0.012  Score=53.60  Aligned_cols=45  Identities=16%  Similarity=0.177  Sum_probs=35.1

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCE--EEEEecCc--hhhHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGIT--VVLTARDE--KRGLEAVEKLK   51 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~--Vii~~r~~--~~~~~~~~~~~   51 (298)
                      +++.|+|++|.+|..++..|+..|..  |++++|++  +.++.....+.
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~   49 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIY   49 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhh
Confidence            36899999999999999999999864  99999965  44444444443

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.27  E-value=0.014  Score=55.82  Aligned_cols=38  Identities=18%  Similarity=0.341  Sum_probs=33.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~   46 (298)
                      +++|.|+ |.+|+++++.|.++|+.|++++++++..+..
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~   39 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRL   39 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHH
Confidence            5888888 9999999999999999999999988765544

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.25  E-value=0.016  Score=53.01  Aligned_cols=78  Identities=18%  Similarity=0.152  Sum_probs=49.7

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .+++|+||+|++|..++..+...|+ +|+.+++++++.+.+.+++   +.+    .+  .|..+ .++.+.+..+..  +
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~----~v--i~~~~-~~~~~~i~~~~~--~  223 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFD----AA--INYKT-DNVAERLRELCP--E  223 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCc----EE--EECCC-CCHHHHHHHHCC--C
Confidence            7999999999999998876666798 7999988876544433332   221    11  22222 223333333321  3


Q ss_pred             CccEEEEcccc
Q 022357           86 KLDILANNAGI   96 (298)
Q Consensus        86 ~id~lv~nAg~   96 (298)
                      .+|+++.+.|.
T Consensus       224 gvd~vid~~g~  234 (345)
T cd08293         224 GVDVYFDNVGG  234 (345)
T ss_pred             CceEEEECCCc
Confidence            69999998874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.23  E-value=0.044  Score=47.62  Aligned_cols=82  Identities=20%  Similarity=0.282  Sum_probs=53.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC-------------------chhhHHHHHHHHhcCCCCcceeEE
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD-------------------EKRGLEAVEKLKASGVDPELLLFH   63 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~   63 (298)
                      +.+++|+|.|+ ||+|.++++.|+..|. ++++.+.+                   ..+.+...+.+++..... .+..+
T Consensus        19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~-~i~~~   96 (228)
T cd00757          19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDV-EIEAY   96 (228)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCC-EEEEe
Confidence            56788999996 8999999999999998 56676532                   123455555666544331 25555


Q ss_pred             EeccCcHHHHHHHHHHHHHhcCCccEEEEccc
Q 022357           64 QLDISDLASVSSLADFIKTQFGKLDILANNAG   95 (298)
Q Consensus        64 ~~Dls~~~~v~~~~~~~~~~~g~id~lv~nAg   95 (298)
                      ..+++ .+++.++++       ..|++|.+..
T Consensus        97 ~~~i~-~~~~~~~~~-------~~DvVi~~~d  120 (228)
T cd00757          97 NERLD-AENAEELIA-------GYDLVLDCTD  120 (228)
T ss_pred             cceeC-HHHHHHHHh-------CCCEEEEcCC
Confidence            55553 334444432       6899998875

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.23  E-value=0.024  Score=54.07  Aligned_cols=75  Identities=21%  Similarity=0.312  Sum_probs=52.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+.+++++|.|+ |.+|+.+++.|...|+ +|++.+|+.++......++.   .     ..     .+.+++...+    
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g---~-----~~-----~~~~~~~~~l----  240 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG---G-----EA-----IPLDELPEAL----  240 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC---C-----cE-----eeHHHHHHHh----
Confidence            367899999987 9999999999999997 79999999877666655532   1     11     1123332222    


Q ss_pred             HhcCCccEEEEccccCC
Q 022357           82 TQFGKLDILANNAGIAS   98 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~   98 (298)
                         ...|++|.+.|...
T Consensus       241 ---~~aDvVI~aT~s~~  254 (423)
T PRK00045        241 ---AEADIVISSTGAPH  254 (423)
T ss_pred             ---ccCCEEEECCCCCC
Confidence               25799998887544

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.20  E-value=0.011  Score=56.68  Aligned_cols=80  Identities=15%  Similarity=0.191  Sum_probs=53.8

Q ss_pred             cCCCcEEEEeCC----------------CCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEec
Q 022357            3 EATKKYAVVTGS----------------NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD   66 (298)
Q Consensus         3 ~~~~~~vlITGa----------------s~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D   66 (298)
                      +|.||++|||+|                ||-.|.++|+.+..+|++|++++-...        +...  .  .+..+.  
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~~~p--~--~v~~i~--  318 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------LADP--Q--GVKVIH--  318 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------CCCC--C--CceEEE--
Confidence            478999999987                688999999999999999988763211        0011  1  133333  


Q ss_pred             cCcHHHHHHHHHHHHHhcCCccEEEEccccCCcc
Q 022357           67 ISDLASVSSLADFIKTQFGKLDILANNAGIASVK  100 (298)
Q Consensus        67 ls~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~  100 (298)
                      +.+..++.+.   +.+.+. .|++|++|++.-+.
T Consensus       319 V~ta~eM~~a---v~~~~~-~Di~I~aAAVaDyr  348 (475)
T PRK13982        319 VESARQMLAA---VEAALP-ADIAIFAAAVADWR  348 (475)
T ss_pred             ecCHHHHHHH---HHhhCC-CCEEEEecccccee
Confidence            3444444444   444443 69999999987554

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.20  E-value=0.027  Score=49.09  Aligned_cols=78  Identities=21%  Similarity=0.275  Sum_probs=50.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|+|+++ +|.+++..+...|.+|+++++++++.+.. .   ..+..    ..  +|..+.+....+.   ....
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~~g~~----~~--~~~~~~~~~~~~~---~~~~  199 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-K---ELGAD----HV--IDYKEEDLEEELR---LTGG  199 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-H---HhCCc----ee--ccCCcCCHHHHHH---HhcC
Confidence            467999999988 99999988888899999999887553332 2   22211    11  2333333333332   2223


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|+++++++.
T Consensus       200 ~~~d~vi~~~~~  211 (271)
T cd05188         200 GGADVVIDAVGG  211 (271)
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.19  E-value=0.12  Score=50.04  Aligned_cols=78  Identities=19%  Similarity=0.147  Sum_probs=52.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +.+++++|.|+ |++|.++|..|+++|++|.+.+++.. ......+.+++.+     +.+...+-..      .      
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~g-----v~~~~~~~~~------~------   75 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALG-----ATVRLGPGPT------L------   75 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcC-----CEEEECCCcc------c------
Confidence            45789999997 88999999999999999999986543 3333445555543     3333221111      0      


Q ss_pred             hcCCccEEEEccccCCcc
Q 022357           83 QFGKLDILANNAGIASVK  100 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~  100 (298)
                       ....|++|...|+.+..
T Consensus        76 -~~~~D~Vv~s~Gi~~~~   92 (480)
T PRK01438         76 -PEDTDLVVTSPGWRPDA   92 (480)
T ss_pred             -cCCCCEEEECCCcCCCC
Confidence             12589999999987544

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.18  E-value=0.065  Score=42.43  Aligned_cols=80  Identities=23%  Similarity=0.340  Sum_probs=54.0

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhhHHHHHHHHhcCCCCcceeEEEe
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLFHQL   65 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~   65 (298)
                      .++++|.|+ ||+|..+++.|+..|. ++.+.+.+.                   .+.+...+.+++..... .+..+..
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~-~v~~~~~   79 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDV-EVEAIPE   79 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTS-EEEEEES
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCce-eeeeeec
Confidence            467888888 8999999999999998 688887531                   23355555666543322 2667777


Q ss_pred             ccCcHHHHHHHHHHHHHhcCCccEEEEccc
Q 022357           66 DISDLASVSSLADFIKTQFGKLDILANNAG   95 (298)
Q Consensus        66 Dls~~~~v~~~~~~~~~~~g~id~lv~nAg   95 (298)
                      +++ .+....+++       ..|++|.+..
T Consensus        80 ~~~-~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   80 KID-EENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             HCS-HHHHHHHHH-------TSSEEEEESS
T ss_pred             ccc-ccccccccc-------CCCEEEEecC
Confidence            773 344455553       6799988764

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.16  E-value=0.028  Score=52.05  Aligned_cols=80  Identities=24%  Similarity=0.353  Sum_probs=50.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .|+.+||.||+||+|.+.++-....|+..+++.++.+. .++.+   ..+.+      ...|..+++-++...+..   .
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~-~~l~k---~lGAd------~vvdy~~~~~~e~~kk~~---~  223 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK-LELVK---KLGAD------EVVDYKDENVVELIKKYT---G  223 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch-HHHHH---HcCCc------EeecCCCHHHHHHHHhhc---C
Confidence            57899999999999999888777789555555554433 22222   23322      235666644433333222   4


Q ss_pred             CCccEEEEccccC
Q 022357           85 GKLDILANNAGIA   97 (298)
Q Consensus        85 g~id~lv~nAg~~   97 (298)
                      +.+|+|+-|.|-.
T Consensus       224 ~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  224 KGVDVVLDCVGGS  236 (347)
T ss_pred             CCccEEEECCCCC
Confidence            5899999999864

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.14  E-value=0.029  Score=52.56  Aligned_cols=82  Identities=21%  Similarity=0.303  Sum_probs=53.7

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC-------------------chhhHHHHHHHHhcCCCCcceeEE
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD-------------------EKRGLEAVEKLKASGVDPELLLFH   63 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~   63 (298)
                      +.+++|+|.|+ ||+|.+++..|+..|. ++++++++                   ..+.+...+.+.+..... .+..+
T Consensus       133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v-~v~~~  210 (376)
T PRK08762        133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDV-QVEAV  210 (376)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCC-EEEEE
Confidence            56678888866 8999999999999998 68898887                   234555566665543321 13344


Q ss_pred             EeccCcHHHHHHHHHHHHHhcCCccEEEEccc
Q 022357           64 QLDISDLASVSSLADFIKTQFGKLDILANNAG   95 (298)
Q Consensus        64 ~~Dls~~~~v~~~~~~~~~~~g~id~lv~nAg   95 (298)
                      ...++. +++..+++       ..|+||++..
T Consensus       211 ~~~~~~-~~~~~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVTS-DNVEALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             eccCCh-HHHHHHHh-------CCCEEEECCC
Confidence            433432 23333332       5788888875

>PLN00203 glutamyl-tRNA reductase

Probab=96.11  E-value=0.024  Score=55.28  Aligned_cols=78  Identities=22%  Similarity=0.348  Sum_probs=55.0

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +.+++++|.|+ |++|+.+++.|..+|+ +|++..|+.++...+.+++..  ..   +.+     ...++....+     
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g--~~---i~~-----~~~~dl~~al-----  327 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPD--VE---IIY-----KPLDEMLACA-----  327 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCC--Cc---eEe-----ecHhhHHHHH-----
Confidence            67899999999 9999999999999997 699999998887776665431  10   111     1222333333     


Q ss_pred             hcCCccEEEEccccCCc
Q 022357           83 QFGKLDILANNAGIASV   99 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~   99 (298)
                        ...|+||.+.+...+
T Consensus       328 --~~aDVVIsAT~s~~p  342 (519)
T PLN00203        328 --AEADVVFTSTSSETP  342 (519)
T ss_pred             --hcCCEEEEccCCCCC
Confidence              267999988765543

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.08  E-value=0.016  Score=47.97  Aligned_cols=38  Identities=21%  Similarity=0.245  Sum_probs=34.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      ++.+++++|.|++.-+|..+++.|.++|++|.++.|+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            57899999999966689999999999999999999874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.04  E-value=0.042  Score=47.29  Aligned_cols=36  Identities=25%  Similarity=0.367  Sum_probs=31.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecC
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARD   39 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~-Vii~~r~   39 (298)
                      .+.+++|+|.|+ ||+|..+++.|+..|.. +.+.+.+
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            356788999997 89999999999999984 8888876

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.03  E-value=0.014  Score=56.42  Aligned_cols=45  Identities=13%  Similarity=0.243  Sum_probs=38.6

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK   49 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~   49 (298)
                      +.+++++|+|+ ||+|++++..|++.|++|++.+|+.++.+...+.
T Consensus       330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            46789999996 7999999999999999999999988776665544

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.02  E-value=0.037  Score=49.18  Aligned_cols=79  Identities=20%  Similarity=0.191  Sum_probs=53.9

Q ss_pred             EEEeCCCCchhHHHHHHHHHCC----CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            9 AVVTGSNKGIGFETVRQLASKG----ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G----~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +.|.||+|.+|..++..|+..|    .+|++.++++++++....+++.....    . ....++-.++....+       
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~----~-~~~~i~~~~d~~~~~-------   68 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEP----L-ADIKVSITDDPYEAF-------   68 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhh----c-cCcEEEECCchHHHh-------
Confidence            4689998899999999999988    78999999988877777777653221    0 011122112222222       


Q ss_pred             CCccEEEEccccCCc
Q 022357           85 GKLDILANNAGIASV   99 (298)
Q Consensus        85 g~id~lv~nAg~~~~   99 (298)
                      ...|++|..+|....
T Consensus        69 ~~aDiVv~t~~~~~~   83 (263)
T cd00650          69 KDADVVIITAGVGRK   83 (263)
T ss_pred             CCCCEEEECCCCCCC
Confidence            267999999987543

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.00  E-value=0.042  Score=50.44  Aligned_cols=73  Identities=26%  Similarity=0.419  Sum_probs=49.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .|++++|+|++ |+|...++-....|++|++++|++++++... ++   +.+    +  ..+-++.+.++.+.+      
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~l---GAd----~--~i~~~~~~~~~~~~~------  228 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KL---GAD----H--VINSSDSDALEAVKE------  228 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-Hh---CCc----E--EEEcCCchhhHHhHh------
Confidence            47899999998 9998776666668999999999987654432 22   221    2  223334555444433      


Q ss_pred             CCccEEEEccc
Q 022357           85 GKLDILANNAG   95 (298)
Q Consensus        85 g~id~lv~nAg   95 (298)
                       .+|++|..++
T Consensus       229 -~~d~ii~tv~  238 (339)
T COG1064         229 -IADAIIDTVG  238 (339)
T ss_pred             -hCcEEEECCC
Confidence             2899999998

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.00  E-value=0.033  Score=50.85  Aligned_cols=73  Identities=22%  Similarity=0.320  Sum_probs=52.4

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +.+++++|.|+ |.+|+.+++.|...| .+|++++|++++..+..+++..        ...     +.+++.+.+.    
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~--------~~~-----~~~~~~~~l~----  237 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG--------NAV-----PLDELLELLN----  237 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC--------eEE-----eHHHHHHHHh----
Confidence            56889999988 999999999999876 5788999998777666665421        111     2233333332    


Q ss_pred             hcCCccEEEEccccC
Q 022357           83 QFGKLDILANNAGIA   97 (298)
Q Consensus        83 ~~g~id~lv~nAg~~   97 (298)
                         ..|++|.+.+..
T Consensus       238 ---~aDvVi~at~~~  249 (311)
T cd05213         238 ---EADVVISATGAP  249 (311)
T ss_pred             ---cCCEEEECCCCC
Confidence               579999998854

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.97  E-value=0.025  Score=59.28  Aligned_cols=76  Identities=22%  Similarity=0.231  Sum_probs=59.8

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHC-CCE-------------EEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASK-GIT-------------VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLA   71 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~-G~~-------------Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~   71 (298)
                      .|+|+|.|+ |.||+..+..|++. ++.             |++.+++.++++.+.+.+.       .+.++++|++|.+
T Consensus       569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~-------~~~~v~lDv~D~e  640 (1042)
T PLN02819        569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE-------NAEAVQLDVSDSE  640 (1042)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC-------CCceEEeecCCHH
Confidence            578999997 99999999999975 333             7888888777666555432       1678899999998


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcccc
Q 022357           72 SVSSLADFIKTQFGKLDILANNAGI   96 (298)
Q Consensus        72 ~v~~~~~~~~~~~g~id~lv~nAg~   96 (298)
                      ++.++++       .+|+||++...
T Consensus       641 ~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        641 SLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHHHhhc-------CCCEEEECCCc
Confidence            8877765       58999999865

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.96  E-value=0.034  Score=49.87  Aligned_cols=42  Identities=17%  Similarity=0.332  Sum_probs=36.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~   46 (298)
                      ++++++|+|+++++|.+++..+...|++|+.++++.++...+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            467899999999999999999999999999999887654433

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.96  E-value=0.085  Score=46.42  Aligned_cols=82  Identities=18%  Similarity=0.225  Sum_probs=52.4

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhhHHHHHHHHhcCCCCcceeEE
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLFH   63 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   63 (298)
                      +.+++|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+...+.+++..... .+..+
T Consensus        30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v-~i~~~  107 (245)
T PRK05690         30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHI-AIETI  107 (245)
T ss_pred             hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCC-EEEEE
Confidence            56789999998 9999999999999997 677776532                   12334445555443321 24555


Q ss_pred             EeccCcHHHHHHHHHHHHHhcCCccEEEEccc
Q 022357           64 QLDISDLASVSSLADFIKTQFGKLDILANNAG   95 (298)
Q Consensus        64 ~~Dls~~~~v~~~~~~~~~~~g~id~lv~nAg   95 (298)
                      ...++. +++..++       ...|++|.+..
T Consensus       108 ~~~i~~-~~~~~~~-------~~~DiVi~~~D  131 (245)
T PRK05690        108 NARLDD-DELAALI-------AGHDLVLDCTD  131 (245)
T ss_pred             eccCCH-HHHHHHH-------hcCCEEEecCC
Confidence            544442 2333333       36788888864

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.95  E-value=0.026  Score=50.73  Aligned_cols=37  Identities=27%  Similarity=0.242  Sum_probs=33.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~   39 (298)
                      .+.||.++|.|+++-+|+.++..|.++|++|.++.|.
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            4678999999998889999999999999999988873

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=95.94  E-value=0.038  Score=49.48  Aligned_cols=40  Identities=20%  Similarity=0.340  Sum_probs=34.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL   44 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~   44 (298)
                      .+++++|+|+++++|.+++..+...|++|+++.+++++.+
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  178 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA  178 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            4689999999999999998888889999999998876544

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.91  E-value=0.054  Score=51.06  Aligned_cols=76  Identities=21%  Similarity=0.295  Sum_probs=58.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++.++++||.|+ |-+|.-+|++|+++| ..|+++.|+.++..+++.++..             +....+++.....   
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~-------------~~~~l~el~~~l~---  237 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGA-------------EAVALEELLEALA---  237 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCC-------------eeecHHHHHHhhh---
Confidence            478899999999 789999999999999 5789999999988888877651             1223344444443   


Q ss_pred             HhcCCccEEEEccccCCc
Q 022357           82 TQFGKLDILANNAGIASV   99 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~   99 (298)
                          ..|++|.+.|...+
T Consensus       238 ----~~DvVissTsa~~~  251 (414)
T COG0373         238 ----EADVVISSTSAPHP  251 (414)
T ss_pred             ----hCCEEEEecCCCcc
Confidence                67999988876544

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=95.91  E-value=0.013  Score=41.42  Aligned_cols=33  Identities=21%  Similarity=0.327  Sum_probs=21.9

Q ss_pred             cEEEEeCCCCchhHHHHHHHH-HCCCEEEEEecC
Q 022357            7 KYAVVTGSNKGIGFETVRQLA-SKGITVVLTARD   39 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La-~~G~~Vii~~r~   39 (298)
                      |+|||+|+|+|.|.+-...++ ..|+..+.+...
T Consensus        40 K~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE   73 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE   73 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred             ceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence            899999999999999444444 568888777654

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.91  E-value=0.024  Score=51.39  Aligned_cols=38  Identities=24%  Similarity=0.302  Sum_probs=34.3

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR   42 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~   42 (298)
                      +.+++++|.|. |++|+.++..|...|++|++.+|++++
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~  187 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH  187 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            46899999998 789999999999999999999999654

>PRK05442 malate dehydrogenase; Provisional

Probab=95.90  E-value=0.031  Score=51.37  Aligned_cols=46  Identities=22%  Similarity=0.204  Sum_probs=34.8

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecCch--hhHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDEK--RGLEAVEKLK   51 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~-------~Vii~~r~~~--~~~~~~~~~~   51 (298)
                      .+++.|+|++|.+|..++..|+..|.       ++++.+.++.  ++...+..+.
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~   58 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELD   58 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhh
Confidence            35899999999999999999998764       6899998543  3444444444

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.84  E-value=0.044  Score=52.28  Aligned_cols=76  Identities=14%  Similarity=0.049  Sum_probs=53.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC-------CC--EEEEEecCchhhHHHHHHHHhcCCC-CcceeEEEeccCcHHHHHHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASK-------GI--TVVLTARDEKRGLEAVEKLKASGVD-PELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~-------G~--~Vii~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      +|.|+|++|.+|.+++..|+..       |.  ++++.+++++.++..+-+++..... ...+.+. .  .+.++     
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~--~~ye~-----  173 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-I--DPYEV-----  173 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-c--CCHHH-----
Confidence            6899999999999999999987       54  7999999999888888887754211 0011111 1  12211     


Q ss_pred             HHHHHhcCCccEEEEccccC
Q 022357           78 DFIKTQFGKLDILANNAGIA   97 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~   97 (298)
                            +...|++|..||..
T Consensus       174 ------~kdaDiVVitAG~p  187 (444)
T PLN00112        174 ------FQDAEWALLIGAKP  187 (444)
T ss_pred             ------hCcCCEEEECCCCC
Confidence                  23679999999975

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.84  E-value=0.065  Score=49.85  Aligned_cols=83  Identities=16%  Similarity=0.186  Sum_probs=52.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhhHHHHHHHHhcCCCCcceeE
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLF   62 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   62 (298)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+..++.++...... .+..
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v-~v~~  102 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDV-KVTV  102 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCc-EEEE
Confidence            356789999998 8999999999999997 678887653                   23455566666544332 2455


Q ss_pred             EEeccCcHHHHHHHHHHHHHhcCCccEEEEccc
Q 022357           63 HQLDISDLASVSSLADFIKTQFGKLDILANNAG   95 (298)
Q Consensus        63 ~~~Dls~~~~v~~~~~~~~~~~g~id~lv~nAg   95 (298)
                      +...++.. +...++.       ..|+||.+..
T Consensus       103 ~~~~i~~~-~~~~~~~-------~~DvVvd~~d  127 (355)
T PRK05597        103 SVRRLTWS-NALDELR-------DADVILDGSD  127 (355)
T ss_pred             EEeecCHH-HHHHHHh-------CCCEEEECCC
Confidence            55555432 2222222       4566666653

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.81  E-value=0.048  Score=46.51  Aligned_cols=36  Identities=25%  Similarity=0.412  Sum_probs=32.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~   39 (298)
                      .+..++|+|.|+ ||+|..++..|++.|. +|++.+++
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            466788999998 8999999999999999 69999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.80  E-value=0.046  Score=50.27  Aligned_cols=76  Identities=20%  Similarity=0.210  Sum_probs=49.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+++|+|+ |++|...+.-+...|+ +|+++++++++++.. .   +.+.+    .  ..|..+. ++.+    +.+.
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~---~lGa~----~--vi~~~~~-~~~~----~~~~  232 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-R---EMGAD----K--LVNPQND-DLDH----YKAE  232 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-H---HcCCc----E--EecCCcc-cHHH----Hhcc
Confidence            5789999986 9999999877777898 588888887664432 2   23321    1  1233332 2222    2222


Q ss_pred             cCCccEEEEcccc
Q 022357           84 FGKLDILANNAGI   96 (298)
Q Consensus        84 ~g~id~lv~nAg~   96 (298)
                      .+.+|++|.++|.
T Consensus       233 ~g~~D~vid~~G~  245 (343)
T PRK09880        233 KGYFDVSFEVSGH  245 (343)
T ss_pred             CCCCCEEEECCCC
Confidence            3569999999984

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.71  E-value=0.046  Score=49.52  Aligned_cols=79  Identities=18%  Similarity=0.182  Sum_probs=50.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|+||+|++|..++..+...|++|+.++++.++.+.+    ++.+.+    .+  .|-.+.+ +.+.+..+..  
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l----~~~Ga~----~v--i~~~~~~-~~~~v~~~~~--  209 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL----KELGFD----AV--FNYKTVS-LEEALKEAAP--  209 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCC----EE--EeCCCcc-HHHHHHHHCC--
Confidence            467999999999999988777777899999998887653333    233321    11  2333322 2222222211  


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|+++.+.|.
T Consensus       210 ~gvd~vld~~g~  221 (329)
T cd08294         210 DGIDCYFDNVGG  221 (329)
T ss_pred             CCcEEEEECCCH
Confidence            368999998873

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.71  E-value=0.068  Score=48.99  Aligned_cols=43  Identities=21%  Similarity=0.151  Sum_probs=37.4

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGL   44 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~   44 (298)
                      |.+.+.+++.|.|+ |.+|..++..++.+|. .|++.+.+++.+.
T Consensus         1 ~~~~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~   44 (321)
T PTZ00082          1 MTMIKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQ   44 (321)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhh
Confidence            77888889999995 8899999999999995 8999999987543

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.62  E-value=0.026  Score=51.42  Aligned_cols=77  Identities=16%  Similarity=0.093  Sum_probs=47.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            8 YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++.|+|++|.+|.++|..|+.+|  .++++.+.+  .++..+-.+......   .....+.  ..+++       .+.+.
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~---~~i~~~~--~~~~~-------y~~~~   67 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTP---AKVTGYL--GPEEL-------KKALK   67 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCc---ceEEEec--CCCch-------HHhcC
Confidence            68899999999999999999888  479999987  433333344432110   1111110  11111       11223


Q ss_pred             CccEEEEccccCC
Q 022357           86 KLDILANNAGIAS   98 (298)
Q Consensus        86 ~id~lv~nAg~~~   98 (298)
                      ..|++|..||...
T Consensus        68 daDivvitaG~~~   80 (310)
T cd01337          68 GADVVVIPAGVPR   80 (310)
T ss_pred             CCCEEEEeCCCCC
Confidence            6899999999753

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.60  E-value=0.11  Score=44.53  Aligned_cols=38  Identities=16%  Similarity=0.289  Sum_probs=33.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      ++.+|++||.|| |.+|..-++.|++.|++|++++.+..
T Consensus         6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            578999999998 88999999999999999999987654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.58  E-value=0.11  Score=43.30  Aligned_cols=32  Identities=25%  Similarity=0.365  Sum_probs=27.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE   40 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~   40 (298)
                      +|+|.|+ ||+|..+++.|++.|. ++++.+.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3778886 9999999999999998 599998775

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.58  E-value=0.052  Score=51.94  Aligned_cols=39  Identities=36%  Similarity=0.533  Sum_probs=34.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~   46 (298)
                      ++.|.||+|.+|.++++.|.++|++|++.+|+++...+.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~   40 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV   40 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence            689999999999999999999999999999987654333

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.56  E-value=0.097  Score=48.98  Aligned_cols=36  Identities=31%  Similarity=0.541  Sum_probs=31.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~   39 (298)
                      .+.+.+|+|.|+ ||+|..++..|+..|. ++++++.+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            356788999988 8999999999999997 78888865

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.55  E-value=0.082  Score=48.04  Aligned_cols=80  Identities=19%  Similarity=0.167  Sum_probs=50.9

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++|.|+|+ |+||.+++..|+.++  ..+++.+.+++..+.....+.....-...-..+..| .+.++           +
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~-----------~   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYED-----------L   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhh-----------h
Confidence            36899999 999999999998875  379999999766666555555432110000111111 11111           2


Q ss_pred             CCccEEEEccccCCc
Q 022357           85 GKLDILANNAGIASV   99 (298)
Q Consensus        85 g~id~lv~nAg~~~~   99 (298)
                      ..-|++|..||....
T Consensus        68 ~~aDiVvitAG~prK   82 (313)
T COG0039          68 KGADIVVITAGVPRK   82 (313)
T ss_pred             cCCCEEEEeCCCCCC
Confidence            367999999997643

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.54  E-value=0.07  Score=48.30  Aligned_cols=80  Identities=20%  Similarity=0.187  Sum_probs=51.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|.|+++++|.+++..+.+.|++|+.++++.++.+...+.+   +..    .+  .|..+.+..+.+. ....  
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~----~~--~~~~~~~~~~~v~-~~~~--  212 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFD----AA--INYKTPDLAEALK-EAAP--  212 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCc----eE--EecCChhHHHHHH-Hhcc--
Confidence            4679999999999999999888889999999988876544332212   211    11  1222322222222 2221  


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|+++.+.|.
T Consensus       213 ~~~d~vi~~~g~  224 (329)
T cd05288         213 DGIDVYFDNVGG  224 (329)
T ss_pred             CCceEEEEcchH
Confidence            469999998873

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.52  E-value=0.4  Score=45.85  Aligned_cols=79  Identities=27%  Similarity=0.298  Sum_probs=51.2

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|+++|+|.+ ++|.++|+.|+++|++|.+.+.+...  ...++++.... .  +.++..... ..    ..      
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~--~~~~~l~~~~~-g--i~~~~g~~~-~~----~~------   65 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKP--ERVAQIGKMFD-G--LVFYTGRLK-DA----LD------   65 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCc--hhHHHHhhccC-C--cEEEeCCCC-HH----HH------
Confidence            568899999985 99999999999999999999876542  11223332110 1  333322211 11    11      


Q ss_pred             cCCccEEEEccccCCcc
Q 022357           84 FGKLDILANNAGIASVK  100 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~  100 (298)
                       ...|+||...|+....
T Consensus        66 -~~~d~vv~spgi~~~~   81 (445)
T PRK04308         66 -NGFDILALSPGISERQ   81 (445)
T ss_pred             -hCCCEEEECCCCCCCC
Confidence             2679999999987543

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.49  E-value=0.11  Score=40.73  Aligned_cols=77  Identities=14%  Similarity=0.258  Sum_probs=55.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHH-CCCEEE-EEecCc----------------------hhhHHHHHHHHhcCCCCcceeEE
Q 022357            8 YAVVTGSNKGIGFETVRQLAS-KGITVV-LTARDE----------------------KRGLEAVEKLKASGVDPELLLFH   63 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~-~G~~Vi-i~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~~   63 (298)
                      +++|.|++|-.|+.+++.+.+ .+++++ +++|++                      .++++..+.     .+      +
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D------V   70 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD------V   70 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S------E
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC------E
Confidence            689999999999999999999 688866 456665                      112222222     11      4


Q ss_pred             EeccCcHHHHHHHHHHHHHhcCCccEEEEccccC
Q 022357           64 QLDISDLASVSSLADFIKTQFGKLDILANNAGIA   97 (298)
Q Consensus        64 ~~Dls~~~~v~~~~~~~~~~~g~id~lv~nAg~~   97 (298)
                      -.|.|.++.+...++.+.++  ++.+|+-..|..
T Consensus        71 vIDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~~  102 (124)
T PF01113_consen   71 VIDFTNPDAVYDNLEYALKH--GVPLVIGTTGFS  102 (124)
T ss_dssp             EEEES-HHHHHHHHHHHHHH--T-EEEEE-SSSH
T ss_pred             EEEcCChHHhHHHHHHHHhC--CCCEEEECCCCC
Confidence            57899999999998888777  789999998864

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.39  E-value=0.097  Score=47.96  Aligned_cols=42  Identities=19%  Similarity=0.083  Sum_probs=34.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAV   47 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~   47 (298)
                      +++++.|.|| |.+|..++..++..| ++|++.+++++.+....
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~   46 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKA   46 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHH
Confidence            4568999997 899999999999988 78999999887654433

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.36  E-value=0.045  Score=47.21  Aligned_cols=42  Identities=26%  Similarity=0.327  Sum_probs=36.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK   49 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~   49 (298)
                      ++.|.||+|.+|.+++..|++.|++|++.+|++++.+...+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            588999999999999999999999999999998776665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK08223 hypothetical protein; Validated

Probab=95.34  E-value=0.086  Score=47.39  Aligned_cols=36  Identities=22%  Similarity=0.303  Sum_probs=30.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~   39 (298)
                      .+++.+|+|.|+ ||+|..++..|+..|. ++.+++.+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            356788999988 8999999999999997 67788765

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.31  E-value=0.035  Score=50.70  Aligned_cols=33  Identities=21%  Similarity=0.146  Sum_probs=29.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDE   40 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~   40 (298)
                      ++.|+|++|.||.++|..|+.++.  ++++.++++
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~   35 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG   35 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence            378999999999999999998875  799999876

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.30  E-value=0.094  Score=47.92  Aligned_cols=78  Identities=17%  Similarity=0.239  Sum_probs=49.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~-Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+++|+|+ |++|..++..+...|++ |+++++++++.+.. .++   +.+    .  .+|..+.+ .+++.+ +.. 
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~---ga~----~--~i~~~~~~-~~~~~~-~~~-  228 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL---GAD----F--VINSGQDD-VQEIRE-LTS-  228 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCC----E--EEcCCcch-HHHHHH-HhC-
Confidence            4789999986 89999998888788998 99998887654332 332   211    1  22333333 333322 211 


Q ss_pred             cCCccEEEEcccc
Q 022357           84 FGKLDILANNAGI   96 (298)
Q Consensus        84 ~g~id~lv~nAg~   96 (298)
                      -..+|++|.+.|.
T Consensus       229 ~~~~d~vid~~g~  241 (339)
T cd08239         229 GAGADVAIECSGN  241 (339)
T ss_pred             CCCCCEEEECCCC
Confidence            1269999999874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.29  E-value=0.082  Score=47.63  Aligned_cols=80  Identities=19%  Similarity=0.197  Sum_probs=51.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|+|+++++|.+++..+...|++|+.++++.++.+.+ .+   .+.+    ..  .|..+.+..+.+.+ ... .
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~---~g~~----~~--~~~~~~~~~~~~~~-~~~-~  209 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RA---LGAD----VA--VDYTRPDWPDQVRE-ALG-G  209 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH---cCCC----EE--EecCCccHHHHHHH-HcC-C
Confidence            467899999999999999888888999999999887654332 22   2211    11  23333333333221 111 1


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      ..+|+++++.|.
T Consensus       210 ~~~d~vl~~~g~  221 (324)
T cd08244         210 GGVTVVLDGVGG  221 (324)
T ss_pred             CCceEEEECCCh
Confidence            259999999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.27  E-value=0.19  Score=44.06  Aligned_cols=35  Identities=23%  Similarity=0.409  Sum_probs=29.6

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~   39 (298)
                      +++.+|+|.|+ ||+|..++..|+..|. ++++++.+
T Consensus        22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            56778999987 8999999999999996 67777754

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.21  E-value=0.056  Score=45.22  Aligned_cols=44  Identities=20%  Similarity=0.228  Sum_probs=35.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHh
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA   52 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~   52 (298)
                      +|.|.|+ |-+|+.+|..++..|++|.+.+++++.++...+.++.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4678888 9999999999999999999999999877666665553

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.19  E-value=0.081  Score=40.40  Aligned_cols=71  Identities=30%  Similarity=0.333  Sum_probs=52.0

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCcc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~id   88 (298)
                      ++|.|. |.+|+.+++.|.+.+.+|++++++++..+.    +...+     +.++..|.++++.++++-      ..+.+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~----~~~~~-----~~~i~gd~~~~~~l~~a~------i~~a~   64 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEE----LREEG-----VEVIYGDATDPEVLERAG------IEKAD   64 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHH----HHHTT-----SEEEES-TTSHHHHHHTT------GGCES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHH----HHhcc-----cccccccchhhhHHhhcC------ccccC
Confidence            567777 589999999999977799999999765333    33333     678889999998877662      12678


Q ss_pred             EEEEccc
Q 022357           89 ILANNAG   95 (298)
Q Consensus        89 ~lv~nAg   95 (298)
                      .+|....
T Consensus        65 ~vv~~~~   71 (116)
T PF02254_consen   65 AVVILTD   71 (116)
T ss_dssp             EEEEESS
T ss_pred             EEEEccC
Confidence            8887765

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.16  E-value=0.17  Score=46.37  Aligned_cols=46  Identities=22%  Similarity=0.208  Sum_probs=36.6

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecCc--hhhHHHHHHHHh
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDE--KRGLEAVEKLKA   52 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~-------~Vii~~r~~--~~~~~~~~~~~~   52 (298)
                      -++.|+|++|.+|.+++..|+.+|.       ++++.+.++  +.+...+..+..
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~   58 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELED   58 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhh
Confidence            3689999999999999999998874       799999865  345666666654

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK04148 hypothetical protein; Provisional

Probab=95.16  E-value=0.056  Score=42.90  Aligned_cols=56  Identities=25%  Similarity=0.259  Sum_probs=43.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLA   71 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~   71 (298)
                      +++++++.|.+  -|.++|..|++.|++|++++.++...+..    +..+     +.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a----~~~~-----~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKA----KKLG-----LNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHH----HHhC-----CeEEECcCCCCC
Confidence            45789999986  78889999999999999999998753333    2222     677888888765

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.12  E-value=0.28  Score=44.81  Aligned_cols=79  Identities=15%  Similarity=0.169  Sum_probs=53.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ..++.|+|+ |.+|.+++..|+..|.  ++++.+.+++.+...+.++.....-.........  .+.+   . +      
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~---~-~------   69 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS---V-T------   69 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH---H-h------
Confidence            357899996 9999999999998764  7999999988777777777654211000111111  1221   1 1      


Q ss_pred             cCCccEEEEccccCC
Q 022357           84 FGKLDILANNAGIAS   98 (298)
Q Consensus        84 ~g~id~lv~nAg~~~   98 (298)
                       ...|++|..||...
T Consensus        70 -~~adivvitaG~~~   83 (312)
T cd05293          70 -ANSKVVIVTAGARQ   83 (312)
T ss_pred             -CCCCEEEECCCCCC
Confidence             26799999999764

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.07  E-value=0.14  Score=44.76  Aligned_cols=36  Identities=25%  Similarity=0.350  Sum_probs=30.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~   39 (298)
                      .+.+.+|+|.|+ ||+|.++++.|+..|. ++++++.+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            466788999988 8999999999999997 68888754

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.05  E-value=0.17  Score=45.16  Aligned_cols=36  Identities=25%  Similarity=0.261  Sum_probs=30.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecC
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARD   39 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~   39 (298)
                      .+.+.+|+|.|+ ||+|.+++..|+..| -++.+++.+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            467788999987 899999999999999 478888754

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.00  E-value=0.075  Score=50.79  Aligned_cols=77  Identities=23%  Similarity=0.305  Sum_probs=57.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ..+.++|.|+ |.+|+.+++.|.++|+.|++++++++..+...+..    ..   +..+..|.++.+.++++-      .
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~----~~---~~~i~gd~~~~~~L~~~~------~  295 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL----PN---TLVLHGDGTDQELLEEEG------I  295 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC----CC---CeEEECCCCCHHHHHhcC------C
Confidence            3578999999 99999999999999999999999987554443321    11   567888999887765542      1


Q ss_pred             CCccEEEEccc
Q 022357           85 GKLDILANNAG   95 (298)
Q Consensus        85 g~id~lv~nAg   95 (298)
                      ...|.+|....
T Consensus       296 ~~a~~vi~~~~  306 (453)
T PRK09496        296 DEADAFIALTN  306 (453)
T ss_pred             ccCCEEEECCC
Confidence            36787776543

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=94.99  E-value=0.21  Score=45.35  Aligned_cols=76  Identities=20%  Similarity=0.219  Sum_probs=51.3

Q ss_pred             EEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            9 AVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      +.|.|+ |++|..++..|+..|  .++++.+++++.+.....++..............+  .+.   +. +       ..
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~---~~-l-------~~   66 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDY---AD-A-------AD   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCH---HH-h-------CC
Confidence            357787 789999999999988  68999999988888877777754321111122111  111   11 1       36


Q ss_pred             ccEEEEccccCC
Q 022357           87 LDILANNAGIAS   98 (298)
Q Consensus        87 id~lv~nAg~~~   98 (298)
                      -|++|.++|...
T Consensus        67 aDiVIitag~p~   78 (300)
T cd00300          67 ADIVVITAGAPR   78 (300)
T ss_pred             CCEEEEcCCCCC
Confidence            799999999753

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.98  E-value=0.076  Score=42.60  Aligned_cols=38  Identities=21%  Similarity=0.152  Sum_probs=34.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      ++.||.++|.|.|.-+|+.++..|.++|++|.++.++.
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t   62 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT   62 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence            46899999999999999999999999999999887653

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK08328 hypothetical protein; Provisional

Probab=94.93  E-value=0.065  Score=46.73  Aligned_cols=37  Identities=24%  Similarity=0.398  Sum_probs=31.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE   40 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~   40 (298)
                      .+.+++|+|.|+ ||+|.++++.|+..|. ++++++.+.
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            356788999988 7999999999999997 688887654

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=94.90  E-value=0.17  Score=47.13  Aligned_cols=79  Identities=18%  Similarity=0.168  Sum_probs=49.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCc-HHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~v~~~~~~~~~   82 (298)
                      .+.+++|+|+ |+||..++..+...|+ +|++++++.++++.. .++   +.+    .  ..|..+ ..++.+.+.++..
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~---Ga~----~--~i~~~~~~~~~~~~v~~~~~  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL---GAT----D--CVNPNDYDKPIQEVIVEITD  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCC----e--EEcccccchhHHHHHHHHhC
Confidence            4679999985 9999998887777898 799998887654433 222   221    1  123332 1233333333322


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                        +.+|++|.++|.
T Consensus       254 --~g~d~vid~~G~  265 (368)
T TIGR02818       254 --GGVDYSFECIGN  265 (368)
T ss_pred             --CCCCEEEECCCC
Confidence              369999999884

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=94.90  E-value=0.13  Score=46.28  Aligned_cols=42  Identities=17%  Similarity=0.234  Sum_probs=35.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~   46 (298)
                      .+.+++|.|+++++|.+++......|++|+++.++.++....
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~  180 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL  180 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            468999999999999999888888899999998877654333

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=94.87  E-value=0.31  Score=38.84  Aligned_cols=79  Identities=18%  Similarity=0.222  Sum_probs=48.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhhHHHHHHHHhcCCCCcceeEEEecc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLFHQLDI   67 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl   67 (298)
                      +++|.|+ ||+|.++++.|+..|. ++.+.+.+.                   .+.+...+.++..... -.+..+..++
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~-v~i~~~~~~~   78 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPG-VNVTAVPEGI   78 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCC-cEEEEEeeec
Confidence            3788887 9999999999999998 688887541                   1234444555544332 1244455444


Q ss_pred             CcHHHHHHHHHHHHHhcCCccEEEEcccc
Q 022357           68 SDLASVSSLADFIKTQFGKLDILANNAGI   96 (298)
Q Consensus        68 s~~~~v~~~~~~~~~~~g~id~lv~nAg~   96 (298)
                      .+... ..+       +.+.|++|.+...
T Consensus        79 ~~~~~-~~~-------~~~~diVi~~~d~   99 (143)
T cd01483          79 SEDNL-DDF-------LDGVDLVIDAIDN   99 (143)
T ss_pred             ChhhH-HHH-------hcCCCEEEECCCC
Confidence            43321 111       2478888888753

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=94.85  E-value=0.31  Score=44.36  Aligned_cols=76  Identities=17%  Similarity=0.166  Sum_probs=50.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            8 YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++.|.|+ |.+|..++..|+.+|  .+|++.++++++....+..+.....-........   .+.+   .        +.
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~---~--------l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYA---D--------CK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHH---H--------hC
Confidence            4888898 899999999999999  6899999998776655555553321100111111   1211   1        23


Q ss_pred             CccEEEEccccCC
Q 022357           86 KLDILANNAGIAS   98 (298)
Q Consensus        86 ~id~lv~nAg~~~   98 (298)
                      ..|++|.++|...
T Consensus        67 ~aDiViita~~~~   79 (308)
T cd05292          67 GADVVVITAGANQ   79 (308)
T ss_pred             CCCEEEEccCCCC
Confidence            6899999999753

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=94.83  E-value=0.16  Score=48.06  Aligned_cols=88  Identities=9%  Similarity=0.076  Sum_probs=49.7

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC---EEEEEecCchhhHHHHHHHHhcCCC-CcceeEEEeccCcHHHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI---TVVLTARDEKRGLEAVEKLKASGVD-PELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~---~Vii~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +.+++|.||+|+||..++..+...|+   +|++++++.++++...+.+...... .  ......|..+.+++.+.+..+.
T Consensus       176 g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~G--a~~~~i~~~~~~~~~~~v~~~t  253 (410)
T cd08238         176 GGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRG--IELLYVNPATIDDLHATLMELT  253 (410)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccC--ceEEEECCCccccHHHHHHHHh
Confidence            57899999999999998775555554   7999999887755443321110000 0  1111223333223333333322


Q ss_pred             HhcCCccEEEEcccc
Q 022357           82 TQFGKLDILANNAGI   96 (298)
Q Consensus        82 ~~~g~id~lv~nAg~   96 (298)
                      .. ..+|.+|.+.|.
T Consensus       254 ~g-~g~D~vid~~g~  267 (410)
T cd08238         254 GG-QGFDDVFVFVPV  267 (410)
T ss_pred             CC-CCCCEEEEcCCC
Confidence            11 258999998874

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.81  E-value=0.08  Score=47.60  Aligned_cols=37  Identities=24%  Similarity=0.287  Sum_probs=34.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~   39 (298)
                      .+.||.++|.|.|.-+|+-++..|.++|++|+++.+.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~  191 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR  191 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            4789999999999999999999999999999998864

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=94.79  E-value=0.18  Score=47.31  Aligned_cols=78  Identities=15%  Similarity=0.043  Sum_probs=50.8

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC-E----EEE----EecCchhhHHHHHHHHhcCCC-CcceeEEEeccCcHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI-T----VVL----TARDEKRGLEAVEKLKASGVD-PELLLFHQLDISDLASVSSL   76 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~-~----Vii----~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~v~~~   76 (298)
                      -++.|+|++|.+|.++|..|+.+|. .    |.+    .+++++.++..+-++...... ...+.+     +. ++-+. 
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i-----~~-~~y~~-  117 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSI-----GI-DPYEV-  117 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEE-----ec-CCHHH-
Confidence            3799999999999999999998764 2    333    488888887777777754211 000111     11 11111 


Q ss_pred             HHHHHHhcCCccEEEEccccCC
Q 022357           77 ADFIKTQFGKLDILANNAGIAS   98 (298)
Q Consensus        77 ~~~~~~~~g~id~lv~nAg~~~   98 (298)
                             +...|++|..||...
T Consensus       118 -------~kdaDIVVitAG~pr  132 (387)
T TIGR01757       118 -------FEDADWALLIGAKPR  132 (387)
T ss_pred             -------hCCCCEEEECCCCCC
Confidence                   236799999999753

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PLN02602 lactate dehydrogenase

Probab=94.77  E-value=0.21  Score=46.32  Aligned_cols=78  Identities=12%  Similarity=0.120  Sum_probs=52.6

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +++.|+|+ |.||.+++..|+..|.  ++++.+.+++.+...+..+.....-....     .++...+.+.        +
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-----~i~~~~dy~~--------~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-----KILASTDYAV--------T  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-----EEEeCCCHHH--------h
Confidence            58999996 9999999999998764  69999999887777777776532110001     1211111111        1


Q ss_pred             CCccEEEEccccCC
Q 022357           85 GKLDILANNAGIAS   98 (298)
Q Consensus        85 g~id~lv~nAg~~~   98 (298)
                      ..-|++|..||...
T Consensus       104 ~daDiVVitAG~~~  117 (350)
T PLN02602        104 AGSDLCIVTAGARQ  117 (350)
T ss_pred             CCCCEEEECCCCCC
Confidence            36799999999753

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=94.74  E-value=0.53  Score=42.86  Aligned_cols=75  Identities=17%  Similarity=0.165  Sum_probs=51.6

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCC-CC-cceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGV-DP-ELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~-~~-~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +.|.|+ |.||..+|..|+.+|.  ++++.+.+++.++..+..+..... .. ..+.....   +.++           +
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~y~~-----------~   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---DYDD-----------C   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---CHHH-----------h
Confidence            678898 9999999999998875  799999998877777777765321 10 11233222   2211           1


Q ss_pred             CCccEEEEccccCC
Q 022357           85 GKLDILANNAGIAS   98 (298)
Q Consensus        85 g~id~lv~nAg~~~   98 (298)
                      ..-|++|..||...
T Consensus        67 ~~aDivvitaG~~~   80 (307)
T cd05290          67 ADADIIVITAGPSI   80 (307)
T ss_pred             CCCCEEEECCCCCC
Confidence            36799999999753

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.73  E-value=0.066  Score=47.91  Aligned_cols=44  Identities=25%  Similarity=0.333  Sum_probs=37.4

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKL   50 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~   50 (298)
                      +++++|.|+ ||-+++++..|++.|+ +|.++.|+.++.+++++.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            468999997 9999999999999998 5999999988777666543

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=94.72  E-value=0.17  Score=46.97  Aligned_cols=79  Identities=14%  Similarity=0.150  Sum_probs=51.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH-HHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~   82 (298)
                      .+.+++|.|+ |+||..++..+...|+ +|+.++++.++.+.. .+   .+.+    .+  .|..+. +++.+.+.++..
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~---lGa~----~~--i~~~~~~~~~~~~v~~~~~  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KK---FGAT----DC--VNPKDHDKPIQQVLVEMTD  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HH---cCCC----EE--EcccccchHHHHHHHHHhC
Confidence            4689999975 9999999888888899 699999887765433 22   2221    11  233332 234444444432


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                        +.+|+++.+.|.
T Consensus       255 --~g~d~vid~~g~  266 (368)
T cd08300         255 --GGVDYTFECIGN  266 (368)
T ss_pred             --CCCcEEEECCCC
Confidence              369999999874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.67  E-value=0.23  Score=44.89  Aligned_cols=41  Identities=12%  Similarity=0.225  Sum_probs=34.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE   45 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~   45 (298)
                      .+.+++|+|+++++|.+++..+...|++++++.++.++...
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  180 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDF  180 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            46799999999999999999888899998888887655433

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=94.62  E-value=0.15  Score=45.54  Aligned_cols=40  Identities=23%  Similarity=0.370  Sum_probs=34.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL   44 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~   44 (298)
                      .+.+++|+|+++++|.+++..+...|+.|+.++++.++.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  178 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLA  178 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH
Confidence            4689999999999999999988889999999988865533

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK06223 malate dehydrogenase; Reviewed

Probab=94.61  E-value=0.21  Score=45.29  Aligned_cols=44  Identities=23%  Similarity=0.174  Sum_probs=35.2

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLK   51 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~   51 (298)
                      +++.|.|+ |-+|..++..++..|. +|++.+++++.+......+.
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~   47 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIA   47 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHH
Confidence            47899999 9999999999999875 99999998876655443333

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=94.61  E-value=0.35  Score=39.58  Aligned_cols=88  Identities=17%  Similarity=0.083  Sum_probs=53.9

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCC----CcceeEEEeccCcHHHHHHHHHH--H
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD----PELLLFHQLDISDLASVSSLADF--I   80 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~v~~~~~~--~   80 (298)
                      +++-+.|- |-.|+.++++|+++|++|++.+|++++.+.+.+.--....+    ......+-.=+.+.++++.++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            35677776 89999999999999999999999987766654331000000    00123444457888888888776  5


Q ss_pred             HHhcCCccEEEEccc
Q 022357           81 KTQFGKLDILANNAG   95 (298)
Q Consensus        81 ~~~~g~id~lv~nAg   95 (298)
                      .....+=.++|.+..
T Consensus        81 ~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   81 LAGLRPGKIIIDMST   95 (163)
T ss_dssp             GGGS-TTEEEEE-SS
T ss_pred             hhccccceEEEecCC
Confidence            554333345555544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=94.60  E-value=0.074  Score=45.36  Aligned_cols=43  Identities=19%  Similarity=0.157  Sum_probs=32.8

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hhHHHHHHHH
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLK   51 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~-~~~~~~~~~~   51 (298)
                      .+..||+|-||.+++++|++.|++|++..|+.+ +.+...+++.
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~   46 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALG   46 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhc
Confidence            455677899999999999999999999866554 4555555443

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=94.58  E-value=0.22  Score=45.93  Aligned_cols=40  Identities=23%  Similarity=0.256  Sum_probs=34.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE   45 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~   45 (298)
                      .+.+++|.|+ |+||..++..+...|++|+++++++++++.
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~  205 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEM  205 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence            4789999999 999999888888889999999988776543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=94.57  E-value=0.049  Score=44.10  Aligned_cols=41  Identities=17%  Similarity=0.259  Sum_probs=33.4

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHH
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK   51 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~   51 (298)
                      |+.+|+++.+|+++|..|.++|.+|+++  ++++.+.+..++.
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~   41 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAP   41 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcC
Confidence            5789999999999999999999999999  4445555555543

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.54  E-value=0.69  Score=44.75  Aligned_cols=39  Identities=21%  Similarity=0.230  Sum_probs=33.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR   42 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~   42 (298)
                      .+.+++++|.| .||.|+++++.|++.|+.|.+.+++...
T Consensus        12 ~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~   50 (473)
T PRK00141         12 QELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETA   50 (473)
T ss_pred             cccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHH
Confidence            45678899999 5899999999999999999999986543

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=94.52  E-value=0.19  Score=42.65  Aligned_cols=35  Identities=23%  Similarity=0.413  Sum_probs=28.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~   39 (298)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.+.+.+
T Consensus        19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            56778999986 6699999999999998 57787654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PLN02740 Alcohol dehydrogenase-like

Probab=94.52  E-value=0.19  Score=47.06  Aligned_cols=79  Identities=14%  Similarity=0.208  Sum_probs=50.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH-HHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~   82 (298)
                      .+.+++|.|+ |+||..++..+...|+ +|+++++++++++.. .+   .+.+    .+  .|..+. +++.+.+.++..
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~---~Ga~----~~--i~~~~~~~~~~~~v~~~~~  266 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KE---MGIT----DF--INPKDSDKPVHERIREMTG  266 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HH---cCCc----EE--EecccccchHHHHHHHHhC
Confidence            4679999986 9999999887777899 699998887654443 22   2221    12  233332 123333333322


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                        +.+|++|.+.|.
T Consensus       267 --~g~dvvid~~G~  278 (381)
T PLN02740        267 --GGVDYSFECAGN  278 (381)
T ss_pred             --CCCCEEEECCCC
Confidence              269999999984

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.51  E-value=0.23  Score=45.03  Aligned_cols=63  Identities=22%  Similarity=0.341  Sum_probs=44.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccC-cHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS-DLASVSSLAD   78 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls-~~~~v~~~~~   78 (298)
                      .|+++.|+|+.| ||. ++-++++. |++|+++++...+-++....+.   .+      .-+|.+ +.+.++++.+
T Consensus       181 pG~~vgI~GlGG-LGh-~aVq~AKAMG~rV~vis~~~~kkeea~~~LG---Ad------~fv~~~~d~d~~~~~~~  245 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGH-MAVQYAKAMGMRVTVISTSSKKKEEAIKSLG---AD------VFVDSTEDPDIMKAIMK  245 (360)
T ss_pred             CCcEEEEecCcc-cch-HHHHHHHHhCcEEEEEeCCchhHHHHHHhcC---cc------eeEEecCCHHHHHHHHH
Confidence            689999999977 995 55566665 9999999999766566555443   32      124566 7777777765

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.48  E-value=0.11  Score=40.88  Aligned_cols=92  Identities=16%  Similarity=0.143  Sum_probs=52.6

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhhHHHHHHHHhcC-----CCCcceeEEEeccCcHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASG-----VDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~-r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      +.++-|.|+ |-+|.++++.|.+.|+.|..++ |+....+.....+....     ........+-+-+.|. .+..+.++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~   87 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQ   87 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHH
Confidence            457888998 8999999999999999998765 65544444444432210     0001123333334443 78888888


Q ss_pred             HHHh--cCCccEEEEccccCCc
Q 022357           80 IKTQ--FGKLDILANNAGIASV   99 (298)
Q Consensus        80 ~~~~--~g~id~lv~nAg~~~~   99 (298)
                      +...  +.+=.+|+|++|..+.
T Consensus        88 La~~~~~~~g~iVvHtSGa~~~  109 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGALGS  109 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS--G
T ss_pred             HHHhccCCCCcEEEECCCCChH
Confidence            8765  3334599999997654

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=94.44  E-value=0.42  Score=40.63  Aligned_cols=35  Identities=17%  Similarity=0.377  Sum_probs=28.7

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecC
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARD   39 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~-Vii~~r~   39 (298)
                      +++.+|+|.|+ ||+|.++++.|+..|.. +.+++.+
T Consensus        17 L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          17 LRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            55678899987 55999999999999984 7787754

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.42  E-value=0.22  Score=44.54  Aligned_cols=39  Identities=21%  Similarity=0.398  Sum_probs=34.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG   43 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~   43 (298)
                      .+.+++|.|+++++|.+++......|++|+.+.+++++.
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~  180 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERA  180 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            467999999999999999888888899999998887553

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=94.41  E-value=0.28  Score=44.70  Aligned_cols=84  Identities=23%  Similarity=0.279  Sum_probs=51.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH--HHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL--ASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~--~~v~~~~~~~~~   82 (298)
                      .+++++|.|+++++|.++++.+...|++|+++.++.+...+..+.+...+.+    .++.  ....  .+....+.....
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~----~~~~--~~~~~~~~~~~~i~~~~~  219 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGAD----HVLT--EEELRSLLATELLKSAPG  219 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCC----EEEe--CcccccccHHHHHHHHcC
Confidence            4689999999999999998888889999998887654322333333333322    1111  1111  022222222221


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                        +.+|.++.+.|.
T Consensus       220 --~~~d~vld~~g~  231 (341)
T cd08290         220 --GRPKLALNCVGG  231 (341)
T ss_pred             --CCceEEEECcCc
Confidence              158999998874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.36  E-value=0.16  Score=45.90  Aligned_cols=43  Identities=21%  Similarity=0.182  Sum_probs=37.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE   45 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~   45 (298)
                      ++.||.+.|.|.++-+|+.++..|.++|++|.+..|......+
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e  198 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKA  198 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence            4689999999999999999999999999999999877654443

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=94.34  E-value=0.24  Score=44.58  Aligned_cols=40  Identities=10%  Similarity=0.200  Sum_probs=34.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL   44 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~   44 (298)
                      .+.+++|.|+++++|.+++..+...|++|+++.++.++.+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~  177 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVE  177 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHH
Confidence            4679999999999999998888889999999988876533

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=94.33  E-value=0.29  Score=44.62  Aligned_cols=30  Identities=27%  Similarity=0.491  Sum_probs=25.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEec
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTAR   38 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~-~Vii~~r   38 (298)
                      +|+|.|+ ||||.++++.|+..|. ++.+++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~   31 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDL   31 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcC
Confidence            3788887 9999999999999997 5778774

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=94.24  E-value=0.23  Score=45.10  Aligned_cols=78  Identities=19%  Similarity=0.156  Sum_probs=46.0

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++++++||+|++|..++......|++|+++++++++.+...    +.+.+    .++  |..+.+-.+. +.++... ..
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~----~~g~~----~~i--~~~~~~~~~~-v~~~~~~-~~  212 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK----KIGAE----YVL--NSSDPDFLED-LKELIAK-LN  212 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCc----EEE--ECCCccHHHH-HHHHhCC-CC
Confidence            45555699999999988766667999999988876544332    22321    222  2222222222 2222111 25


Q ss_pred             ccEEEEcccc
Q 022357           87 LDILANNAGI   96 (298)
Q Consensus        87 id~lv~nAg~   96 (298)
                      +|+++.+.|.
T Consensus       213 ~d~vid~~g~  222 (324)
T cd08291         213 ATIFFDAVGG  222 (324)
T ss_pred             CcEEEECCCc
Confidence            8999998873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=94.24  E-value=0.23  Score=44.13  Aligned_cols=41  Identities=20%  Similarity=0.237  Sum_probs=34.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE   45 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~   45 (298)
                      .+.+++|.|+++++|.+++..+...|++|+.+++++++.+.
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  176 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAEL  176 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            46899999999999999988888889999999887765433

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=94.23  E-value=0.21  Score=45.23  Aligned_cols=79  Identities=15%  Similarity=0.135  Sum_probs=50.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|.|+++++|.+++......|++|+.+.+++++...+ .+   .+.+    ..+  |..+. +..+.+.....  
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~----~v~--~~~~~-~~~~~~~~~~~--  205 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KS---LGCD----RPI--NYKTE-DLGEVLKKEYP--  205 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HH---cCCc----eEE--eCCCc-cHHHHHHHhcC--
Confidence            467899999999999998887778899999998876654333 22   2211    112  22222 22222322221  


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      ..+|.++++.|.
T Consensus       206 ~~vd~v~~~~g~  217 (329)
T cd08250         206 KGVDVVYESVGG  217 (329)
T ss_pred             CCCeEEEECCcH
Confidence            368999998773

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=94.22  E-value=0.23  Score=45.87  Aligned_cols=34  Identities=26%  Similarity=0.366  Sum_probs=29.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~   39 (298)
                      .+.+++|+|+ |+||...+.-+...|++|++++|+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            5789999986 999999987777789999999984

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=94.21  E-value=0.28  Score=45.53  Aligned_cols=79  Identities=16%  Similarity=0.209  Sum_probs=49.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH-HHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~   82 (298)
                      .+.+++|.|+ |+||..++..+...|+ +|++++++.++.+..    ++.+..    .+  .|..+. +++.+.+..+..
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~----~~~Ga~----~~--i~~~~~~~~~~~~v~~~~~  255 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA----KKFGVT----EF--VNPKDHDKPVQEVIAEMTG  255 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCc----eE--EcccccchhHHHHHHHHhC
Confidence            4679999985 9999998887777898 799999887654432    222321    11  122221 234343333332


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                        +.+|+++.+.|.
T Consensus       256 --~~~d~vid~~G~  267 (369)
T cd08301         256 --GGVDYSFECTGN  267 (369)
T ss_pred             --CCCCEEEECCCC
Confidence              269999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.21  E-value=0.1  Score=42.84  Aligned_cols=38  Identities=26%  Similarity=0.296  Sum_probs=30.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      ++.||+++|.|.|.-+|+-++..|.++|++|.+.....
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T   70 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT   70 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC
Confidence            36899999999999999999999999999999887654

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=94.20  E-value=0.24  Score=35.93  Aligned_cols=35  Identities=34%  Similarity=0.423  Sum_probs=30.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHC-CCEEEEEec
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTAR   38 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r   38 (298)
                      ++.+++++|.|+ |+.|+.++..|.+. +.+|.+.+|
T Consensus        20 ~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          20 SLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            356899999999 99999999999998 567777776

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=94.11  E-value=0.22  Score=38.67  Aligned_cols=66  Identities=26%  Similarity=0.402  Sum_probs=43.4

Q ss_pred             chhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC--CccEEEEcc
Q 022357           17 GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG--KLDILANNA   94 (298)
Q Consensus        17 gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g--~id~lv~nA   94 (298)
                      |||...+.-+...|++|+++++++.+.+.    +++.+..    .+  +|-++.+    +.+++.+.++  .+|++|.+.
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~----~~~~Ga~----~~--~~~~~~~----~~~~i~~~~~~~~~d~vid~~   66 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLEL----AKELGAD----HV--IDYSDDD----FVEQIRELTGGRGVDVVIDCV   66 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHH----HHHTTES----EE--EETTTSS----HHHHHHHHTTTSSEEEEEESS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHH----HHhhccc----cc--ccccccc----cccccccccccccceEEEEec
Confidence            68988888888889999999998766433    2333321    12  3444443    3444444443  699999999


Q ss_pred             cc
Q 022357           95 GI   96 (298)
Q Consensus        95 g~   96 (298)
                      |.
T Consensus        67 g~   68 (130)
T PF00107_consen   67 GS   68 (130)
T ss_dssp             SS
T ss_pred             Cc
Confidence            84

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.11  E-value=0.15  Score=45.93  Aligned_cols=49  Identities=18%  Similarity=0.289  Sum_probs=38.6

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK   51 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~   51 (298)
                      |++-. ++|.|.|+ |-+|..+|..|+..|+.|++.+++++.++...+.+.
T Consensus         1 ~~~~~-~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~   49 (286)
T PRK07819          1 MSDAI-QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIE   49 (286)
T ss_pred             CCCCc-cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHH
Confidence            44433 46777777 899999999999999999999999988766554443

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=94.10  E-value=0.3  Score=46.44  Aligned_cols=83  Identities=20%  Similarity=0.279  Sum_probs=57.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.++||.|| ||||-++.+.|+-.|. .|.+++-+.=++-.+          ++.+.+-+-|+....+  ..+.++..+
T Consensus        11 ~~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNL----------NRQFLFrkkhVgqsKA--~vA~~~v~~   77 (603)
T KOG2013|consen   11 KSGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNL----------NRQFLFRKKHVGQSKA--TVAAKAVKQ   77 (603)
T ss_pred             ccCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccch----------hhhheeehhhcCchHH--HHHHHHHHH
Confidence            4678999998 8999999999999998 588888764332221          1126666667776543  222333334


Q ss_pred             -cCCccEEEEccccCCcc
Q 022357           84 -FGKLDILANNAGIASVK  100 (298)
Q Consensus        84 -~g~id~lv~nAg~~~~~  100 (298)
                       +++++++-..|.+..+.
T Consensus        78 Fnpn~~l~~yhanI~e~~   95 (603)
T KOG2013|consen   78 FNPNIKLVPYHANIKEPK   95 (603)
T ss_pred             hCCCCceEeccccccCcc
Confidence             46899999999988664

>cd05295 MDH_like Malate dehydrogenase-like

Probab=94.10  E-value=0.17  Score=48.34  Aligned_cols=77  Identities=9%  Similarity=0.075  Sum_probs=50.1

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHC---CC----EEEEEec--CchhhHHHHHHHHhcCCC-CcceeEEEeccCcHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASK---GI----TVVLTAR--DEKRGLEAVEKLKASGVD-PELLLFHQLDISDLASVSSL   76 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~---G~----~Vii~~r--~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~v~~~   76 (298)
                      -+|+||||+|.||.++.-.+++-   |.    .+++++.  +.+.++..+-+++..... ...+.+     +. +. ...
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i-----~~-~~-~ea  196 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISV-----TT-DL-DVA  196 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEE-----EE-CC-HHH
Confidence            47999999999999999999972   42    2667777  566777777777753211 000211     21 11 111


Q ss_pred             HHHHHHhcCCccEEEEccccC
Q 022357           77 ADFIKTQFGKLDILANNAGIA   97 (298)
Q Consensus        77 ~~~~~~~~g~id~lv~nAg~~   97 (298)
                      +       ...|++|..||..
T Consensus       197 ~-------~daDvvIitag~p  210 (452)
T cd05295         197 F-------KDAHVIVLLDDFL  210 (452)
T ss_pred             h-------CCCCEEEECCCCC
Confidence            2       3689999999975

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=94.01  E-value=0.13  Score=42.76  Aligned_cols=41  Identities=27%  Similarity=0.259  Sum_probs=35.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL   44 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~   44 (298)
                      .+.++++.|.|. |.||+++|+.|..-|++|+..+|......
T Consensus        33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            468999999987 99999999999999999999999976433

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=93.99  E-value=0.049  Score=41.16  Aligned_cols=37  Identities=19%  Similarity=0.270  Sum_probs=32.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      +++++++||.|| |.+|..=++.|++.|++|++++...
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            578999999999 9999999999999999999999885

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=93.98  E-value=0.16  Score=37.34  Aligned_cols=41  Identities=17%  Similarity=0.311  Sum_probs=32.9

Q ss_pred             EEEeCCCCchhHHHHHHHHHCC---CEEEEE-ecCchhhHHHHHHH
Q 022357            9 AVVTGSNKGIGFETVRQLASKG---ITVVLT-ARDEKRGLEAVEKL   50 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G---~~Vii~-~r~~~~~~~~~~~~   50 (298)
                      +.|. |+|.+|.++++.|+++|   .+|++. .|++++..+..++.
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            3344 67999999999999999   999955 89988777766553

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=93.93  E-value=0.65  Score=43.76  Aligned_cols=80  Identities=15%  Similarity=0.204  Sum_probs=45.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+++|. |+|+||..++..+...|++++++ +++.++++. +.   +.+.     .  .+|.+...++.+.+.++...
T Consensus       185 ~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~-a~---~~Ga-----~--~v~~~~~~~~~~~v~~~~~~  252 (393)
T TIGR02819       185 PGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQ-AR---SFGC-----E--TVDLSKDATLPEQIEQILGE  252 (393)
T ss_pred             CCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHH-HH---HcCC-----e--EEecCCcccHHHHHHHHcCC
Confidence            46789994 56999999888777789986554 455433222 22   2221     1  12332222233323322211


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                       ..+|++|.+.|..
T Consensus       253 -~g~Dvvid~~G~~  265 (393)
T TIGR02819       253 -PEVDCAVDCVGFE  265 (393)
T ss_pred             -CCCcEEEECCCCc
Confidence             2589999999964

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=93.92  E-value=0.3  Score=45.43  Aligned_cols=78  Identities=21%  Similarity=0.266  Sum_probs=48.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+++|+|+ |+||..++..+...|+ +|+++++++++++.. ++   .+.+    .  ..|..+.+..+. +..+.. 
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~---~Ga~----~--~i~~~~~~~~~~-i~~~~~-  257 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RE---LGAT----A--TVNAGDPNAVEQ-VRELTG-  257 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HH---cCCc----e--EeCCCchhHHHH-HHHHhC-
Confidence            4679999985 8999988777777899 688888887664432 22   2221    1  123333322222 222211 


Q ss_pred             cCCccEEEEcccc
Q 022357           84 FGKLDILANNAGI   96 (298)
Q Consensus        84 ~g~id~lv~nAg~   96 (298)
                       +.+|++|.+.|.
T Consensus       258 -~g~d~vid~~G~  269 (371)
T cd08281         258 -GGVDYAFEMAGS  269 (371)
T ss_pred             -CCCCEEEECCCC
Confidence             268999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=93.90  E-value=0.26  Score=45.60  Aligned_cols=79  Identities=16%  Similarity=0.212  Sum_probs=47.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~-Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+++|.|+ |+||..++..+...|++ |+++++++++.+.. ++   .+.+    .+  .|..+.+..+.+ ..+...
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~---~Ga~----~~--i~~~~~~~~~~i-~~~~~~  243 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-RE---FGAT----HT--VNSSGTDPVEAI-RALTGG  243 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---cCCc----eE--EcCCCcCHHHHH-HHHhCC
Confidence            4689999985 99999988877778985 88888887654443 22   2221    11  233333222222 222111


Q ss_pred             cCCccEEEEcccc
Q 022357           84 FGKLDILANNAGI   96 (298)
Q Consensus        84 ~g~id~lv~nAg~   96 (298)
                       ..+|++|.+.|.
T Consensus       244 -~g~d~vid~~g~  255 (358)
T TIGR03451       244 -FGADVVIDAVGR  255 (358)
T ss_pred             -CCCCEEEECCCC
Confidence             158999999884

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=93.88  E-value=0.39  Score=43.84  Aligned_cols=76  Identities=24%  Similarity=0.360  Sum_probs=48.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|+|+++++|.+++......|++|+++.++ ++ ...++++   +..    .  .+|..+.+..+.+    .. .
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~-~~~~~~~---g~~----~--~~~~~~~~~~~~l----~~-~  225 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DA-IPLVKSL---GAD----D--VIDYNNEDFEEEL----TE-R  225 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-ch-HHHHHHh---CCc----e--EEECCChhHHHHH----Hh-c
Confidence            37899999999999999988888889999888764 22 2222222   211    1  1233333222222    22 2


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|+++.+.|.
T Consensus       226 ~~vd~vi~~~g~  237 (350)
T cd08248         226 GKFDVILDTVGG  237 (350)
T ss_pred             CCCCEEEECCCh
Confidence            469999998873

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=93.87  E-value=0.13  Score=43.83  Aligned_cols=37  Identities=16%  Similarity=0.245  Sum_probs=33.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      ++.+|.+||.|| |.+|...++.|.+.|++|+++.+..
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            578999999999 9999999999999999999998754

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=93.87  E-value=0.29  Score=44.96  Aligned_cols=77  Identities=26%  Similarity=0.401  Sum_probs=48.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+++|+|+ +++|..++..+...|+ +|++++++.++.+.. .+   .+.+   .   ..|..+.+-.+    .+.+.
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~---~ga~---~---~i~~~~~~~~~----~l~~~  236 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EE---LGAT---I---VLDPTEVDVVA----EVRKL  236 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HH---hCCC---E---EECCCccCHHH----HHHHH
Confidence            4679999985 8999999888888899 788888877654332 22   2221   1   12333332222    22222


Q ss_pred             c--CCccEEEEcccc
Q 022357           84 F--GKLDILANNAGI   96 (298)
Q Consensus        84 ~--g~id~lv~nAg~   96 (298)
                      .  ..+|+++.+.|.
T Consensus       237 ~~~~~~d~vid~~g~  251 (351)
T cd08233         237 TGGGGVDVSFDCAGV  251 (351)
T ss_pred             hCCCCCCEEEECCCC
Confidence            2  249999999874

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PRK07411 hypothetical protein; Validated

Probab=93.77  E-value=0.49  Score=44.63  Aligned_cols=82  Identities=13%  Similarity=0.148  Sum_probs=50.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhhHHHHHHHHhcCCCCcceeEE
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLFH   63 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   63 (298)
                      ++..+|+|.|+ ||+|..+++.|+..|. ++++++.+.                   .+.+..++.++...... .+..+
T Consensus        36 L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v-~v~~~  113 (390)
T PRK07411         36 LKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYC-QVDLY  113 (390)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCC-eEEEE
Confidence            56678999988 8999999999999997 577776531                   12344555555543321 25555


Q ss_pred             EeccCcHHHHHHHHHHHHHhcCCccEEEEccc
Q 022357           64 QLDISDLASVSSLADFIKTQFGKLDILANNAG   95 (298)
Q Consensus        64 ~~Dls~~~~v~~~~~~~~~~~g~id~lv~nAg   95 (298)
                      ...++.. ...+++.       ..|+||.+..
T Consensus       114 ~~~~~~~-~~~~~~~-------~~D~Vvd~~d  137 (390)
T PRK07411        114 ETRLSSE-NALDILA-------PYDVVVDGTD  137 (390)
T ss_pred             ecccCHH-hHHHHHh-------CCCEEEECCC
Confidence            5555542 2333322       5677776643

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=93.76  E-value=0.39  Score=45.15  Aligned_cols=39  Identities=13%  Similarity=0.193  Sum_probs=32.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG   43 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~   43 (298)
                      .+.+++|+|++|++|.+++..+...|++++++.++.++.
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~  227 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKA  227 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHH
Confidence            467999999999999999888778899998887776543

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK14851 hypothetical protein; Provisional

Probab=93.71  E-value=0.5  Score=47.70  Aligned_cols=35  Identities=14%  Similarity=0.245  Sum_probs=29.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEec
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTAR   38 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r   38 (298)
                      .+.+.+|+|.|+ ||+|..++..|+..|. ++++++.
T Consensus        40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~   75 (679)
T PRK14851         40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADF   75 (679)
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcC
Confidence            356789999995 8999999999999997 5777764

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=93.69  E-value=0.17  Score=41.48  Aligned_cols=40  Identities=30%  Similarity=0.302  Sum_probs=31.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhh
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG   43 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~   43 (298)
                      ++.||+++|.|= |.+|+.+|+.|...|++|+++..++-++
T Consensus        20 ~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~a   59 (162)
T PF00670_consen   20 MLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRA   59 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHH
T ss_pred             eeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHH
Confidence            467899999987 8999999999999999999999998543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=93.64  E-value=0.43  Score=43.42  Aligned_cols=37  Identities=30%  Similarity=0.210  Sum_probs=30.6

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGL   44 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~   44 (298)
                      +++.|.|+ |-+|..+|..|+.+|. +|++.+.+++...
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~   39 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQ   39 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhH
Confidence            46888897 8899999999999886 8999999766433

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=93.63  E-value=0.6  Score=40.82  Aligned_cols=30  Identities=30%  Similarity=0.553  Sum_probs=25.3

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC-EEEEEecC
Q 022357            9 AVVTGSNKGIGFETVRQLASKGI-TVVLTARD   39 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~-~Vii~~r~   39 (298)
                      ++|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus         2 VlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D   32 (234)
T cd01484           2 VLLVGA-GGIGCELLKNLALMGFGQIHVIDMD   32 (234)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            677775 8999999999999997 57787764

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=93.60  E-value=0.43  Score=43.47  Aligned_cols=40  Identities=18%  Similarity=0.361  Sum_probs=34.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL   44 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~   44 (298)
                      .+.+++|.|+++++|.+++..+.+.|++|+.+.+++++.+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~  204 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLE  204 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            4679999999999999999888889999999998876543

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=93.59  E-value=0.39  Score=45.29  Aligned_cols=34  Identities=26%  Similarity=0.386  Sum_probs=29.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEec
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTAR   38 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r   38 (298)
                      +.+.+|+|.|+ ||+|..+++.|+..|. ++.+++.
T Consensus        40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~   74 (392)
T PRK07878         40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEF   74 (392)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            46778999988 8999999999999997 5777764

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=93.58  E-value=0.38  Score=45.05  Aligned_cols=41  Identities=15%  Similarity=0.249  Sum_probs=34.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE   45 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~   45 (298)
                      .+.+++|+|++|+||.+++..+...|+++++++++.++.+.
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~  233 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEY  233 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            36799999999999999987777789999888887665443

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.56  E-value=0.29  Score=44.23  Aligned_cols=78  Identities=17%  Similarity=0.072  Sum_probs=51.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+.||.++|.|-++-+|+.+|..|+++|++|.+.. |+. .+.+..+   .       ..++.+=+.+.+.++...    
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~-~l~e~~~---~-------ADIVIsavg~~~~v~~~~----  219 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR-DLPAVCR---R-------ADILVAAVGRPEMVKGDW----  219 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC-CHHHHHh---c-------CCEEEEecCChhhcchhe----
Confidence            46899999999999999999999999999999985 554 2222221   1       223333345555444332    


Q ss_pred             HhcCCccEEEEccccCC
Q 022357           82 TQFGKLDILANNAGIAS   98 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~   98 (298)
                         -+...+|...|+..
T Consensus       220 ---lk~GavVIDvGin~  233 (296)
T PRK14188        220 ---IKPGATVIDVGINR  233 (296)
T ss_pred             ---ecCCCEEEEcCCcc
Confidence               24456677777653

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=93.55  E-value=0.47  Score=44.49  Aligned_cols=72  Identities=18%  Similarity=0.201  Sum_probs=50.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .++++|+|++ .+|+.+++.+.+.|++|++++.++........           -..+..|..|.+.+.+++++.     
T Consensus        12 ~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a-----------d~~~~~~~~d~~~l~~~~~~~-----   74 (395)
T PRK09288         12 ATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-----------HRSHVIDMLDGDALRAVIERE-----   74 (395)
T ss_pred             CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh-----------hheEECCCCCHHHHHHHHHHh-----
Confidence            4689999874 69999999999999999999987643111110           123566777777766665432     


Q ss_pred             CccEEEEcc
Q 022357           86 KLDILANNA   94 (298)
Q Consensus        86 ~id~lv~nA   94 (298)
                      .+|.++...
T Consensus        75 ~id~vi~~~   83 (395)
T PRK09288         75 KPDYIVPEI   83 (395)
T ss_pred             CCCEEEEee
Confidence            688887654

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.53  E-value=0.22  Score=44.74  Aligned_cols=36  Identities=19%  Similarity=0.228  Sum_probs=32.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR   38 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r   38 (298)
                      ++.||.++|.|.|.-+|+-++..|.++|++|.++..
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs  189 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI  189 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC
Confidence            367999999999999999999999999999988753

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=93.49  E-value=0.33  Score=45.00  Aligned_cols=75  Identities=24%  Similarity=0.387  Sum_probs=46.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++++|.|+ |+||..++..+...|++|++++.+.++....+.++   +.+    .+  .|..+.+.+.+       ..
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~---Ga~----~v--i~~~~~~~~~~-------~~  245 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL---GAD----SF--LVSTDPEKMKA-------AI  245 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC---CCc----EE--EcCCCHHHHHh-------hc
Confidence            4779999775 99999988877778999988877765443333332   221    11  12233222222       12


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|++|.+.|.
T Consensus       246 ~~~D~vid~~g~  257 (360)
T PLN02586        246 GTMDYIIDTVSA  257 (360)
T ss_pred             CCCCEEEECCCC
Confidence            468999999883

>PLN02827 Alcohol dehydrogenase-like

Probab=93.49  E-value=0.46  Score=44.43  Aligned_cols=79  Identities=16%  Similarity=0.262  Sum_probs=48.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH-HHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~-Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~   82 (298)
                      .+.+++|.|+ |+||..++..+...|++ |+++++++++.+.. .+   .+.+    .+  .|..+. ++..+.+.++..
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~---lGa~----~~--i~~~~~~~~~~~~v~~~~~  261 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KT---FGVT----DF--INPNDLSEPIQQVIKRMTG  261 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HH---cCCc----EE--EcccccchHHHHHHHHHhC
Confidence            4789999985 99999988877778985 67777776554322 22   2221    11  233321 233333333322


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                        +.+|++|.+.|.
T Consensus       262 --~g~d~vid~~G~  273 (378)
T PLN02827        262 --GGADYSFECVGD  273 (378)
T ss_pred             --CCCCEEEECCCC
Confidence              269999999985

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=93.48  E-value=0.41  Score=44.12  Aligned_cols=38  Identities=21%  Similarity=0.264  Sum_probs=31.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRG   43 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~   43 (298)
                      .+.++||+| +|++|.+++..+...|+ +|+++++++++.
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~  215 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERL  215 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            577899997 59999999887777899 899998876654

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=93.40  E-value=1.3  Score=39.21  Aligned_cols=80  Identities=15%  Similarity=0.117  Sum_probs=48.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.++|..|+++|+-..++.+......+|+.++.++..++...+.....+..  ++.++..|+.+..        +  .-
T Consensus        77 ~g~~VLDiG~G~G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~--~v~~~~~d~~~l~--------~--~~  144 (272)
T PRK11873         77 PGETVLDLGSGGGFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYT--NVEFRLGEIEALP--------V--AD  144 (272)
T ss_pred             CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCC--CEEEEEcchhhCC--------C--CC
Confidence            4679999998887544333333333457999999887666655544443332  2667776664321        0  11


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|+++.|...
T Consensus       145 ~~fD~Vi~~~v~  156 (272)
T PRK11873        145 NSVDVIISNCVI  156 (272)
T ss_pred             CceeEEEEcCcc
Confidence            368999887643

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=93.38  E-value=0.19  Score=47.63  Aligned_cols=41  Identities=29%  Similarity=0.383  Sum_probs=35.8

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE   45 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~   45 (298)
                      +.|++|+|.|+ |.||+.+++.+...|++|+++++++.++..
T Consensus       200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~  240 (413)
T cd00401         200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQ  240 (413)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHH
Confidence            46899999998 689999999999999999999998766443

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=93.33  E-value=0.24  Score=43.07  Aligned_cols=35  Identities=20%  Similarity=0.287  Sum_probs=30.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEE-EEec
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVV-LTAR   38 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vi-i~~r   38 (298)
                      .+.+++++|-| .|.+|+.+++.|.+.|++|+ +.+.
T Consensus        28 ~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~   63 (227)
T cd01076          28 GLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS   63 (227)
T ss_pred             CccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence            46788999987 69999999999999999998 5555

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional

Probab=93.31  E-value=1.5  Score=42.16  Aligned_cols=78  Identities=18%  Similarity=0.170  Sum_probs=52.1

Q ss_pred             CCcCCCcEEEEeCCCCchhHH-HHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFE-TVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a-~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |...++++++|.|. |+.|.+ +|+.|.++|++|.+.+.+...   ..+++.+.+     +.++.. - +.+.    +  
T Consensus         2 ~~~~~~~~v~viG~-G~sG~s~~a~~L~~~G~~V~~~D~~~~~---~~~~l~~~g-----i~~~~~-~-~~~~----~--   64 (461)
T PRK00421          2 PELRRIKRIHFVGI-GGIGMSGLAEVLLNLGYKVSGSDLKESA---VTQRLLELG-----AIIFIG-H-DAEN----I--   64 (461)
T ss_pred             CCcCCCCEEEEEEE-chhhHHHHHHHHHhCCCeEEEECCCCCh---HHHHHHHCC-----CEEeCC-C-CHHH----C--
Confidence            55667889999998 579999 799999999999999976543   123344332     222211 1 1111    1  


Q ss_pred             HHHhcCCccEEEEccccCCcc
Q 022357           80 IKTQFGKLDILANNAGIASVK  100 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~  100 (298)
                           ..+|.||...|+....
T Consensus        65 -----~~~d~vv~spgi~~~~   80 (461)
T PRK00421         65 -----KDADVVVYSSAIPDDN   80 (461)
T ss_pred             -----CCCCEEEECCCCCCCC
Confidence                 2579999999987543

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.31  E-value=0.26  Score=44.41  Aligned_cols=42  Identities=21%  Similarity=0.182  Sum_probs=35.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK   49 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~   49 (298)
                      +++.|.|+ |-+|..+|..|+.+|++|++.+++++.++...+.
T Consensus         5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (292)
T PRK07530          5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLAT   46 (292)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence            56778877 8999999999999999999999998876654443

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=93.30  E-value=0.38  Score=43.64  Aligned_cols=42  Identities=19%  Similarity=0.368  Sum_probs=36.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~   46 (298)
                      .+.+++|.|+++.+|.+++..+...|++|+.++++.++.+..
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            467999999999999999988888999999999887665443

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=93.30  E-value=0.18  Score=47.91  Aligned_cols=39  Identities=26%  Similarity=0.315  Sum_probs=35.2

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG   43 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~   43 (298)
                      +.|++++|.|. |.||+.++..|...|++|+++++++.+.
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra  248 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA  248 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence            47899999997 7999999999999999999999987653

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=93.15  E-value=0.14  Score=41.82  Aligned_cols=35  Identities=20%  Similarity=0.338  Sum_probs=31.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR   38 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r   38 (298)
                      ++.||+++|.|| |.+|...++.|++.|++|++++.
T Consensus        10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719         10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            468999999998 89999999999999999998853

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=93.13  E-value=0.63  Score=42.83  Aligned_cols=39  Identities=18%  Similarity=0.213  Sum_probs=34.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR   42 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~   42 (298)
                      .+.++++.|.|. |.||+++|+.|...|++|++.+|++..
T Consensus       143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            467889999987 889999999999999999999988654

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=93.12  E-value=0.45  Score=44.48  Aligned_cols=75  Identities=24%  Similarity=0.407  Sum_probs=47.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|.|+ |+||..++......|++|++++++.++..+.+.+   .+.+    .+  .|..+.+.+.+       ..
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~---lGa~----~~--i~~~~~~~v~~-------~~  240 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDR---LGAD----SF--LVTTDSQKMKE-------AV  240 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHh---CCCc----EE--EcCcCHHHHHH-------hh
Confidence            4689999986 8999998887777899999988775443333222   2221    11  22233222221       12


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|+++.+.|.
T Consensus       241 ~~~D~vid~~G~  252 (375)
T PLN02178        241 GTMDFIIDTVSA  252 (375)
T ss_pred             CCCcEEEECCCc
Confidence            468999999874

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=93.09  E-value=3.5  Score=36.49  Aligned_cols=78  Identities=23%  Similarity=0.262  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .|-++||--|.||+|..+++.|-..|+++|.+..+.++.+..++.    + .   -+.  .|-+.+|-+    +++.+..
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken----G-~---~h~--I~y~~eD~v----~~V~kiT  211 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN----G-A---EHP--IDYSTEDYV----DEVKKIT  211 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc----C-C---cce--eeccchhHH----HHHHhcc
Confidence            467999999999999999999999999999998876654443322    1 1   222  344444433    3333322


Q ss_pred             -C-CccEEEEcccc
Q 022357           85 -G-KLDILANNAGI   96 (298)
Q Consensus        85 -g-~id~lv~nAg~   96 (298)
                       | .+|++.-.-|.
T Consensus       212 ngKGVd~vyDsvG~  225 (336)
T KOG1197|consen  212 NGKGVDAVYDSVGK  225 (336)
T ss_pred             CCCCceeeeccccc
Confidence             3 58888877764

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=93.05  E-value=0.24  Score=45.73  Aligned_cols=35  Identities=20%  Similarity=0.294  Sum_probs=28.4

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCE---EEEEecCch
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGIT---VVLTARDEK   41 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~---Vii~~r~~~   41 (298)
                      .+++|.||||.+|+++++.|+++|+.   +..+.+...
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~   39 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARS   39 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcccc
Confidence            47999999999999999999998775   455655543

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.99  E-value=0.27  Score=44.14  Aligned_cols=37  Identities=27%  Similarity=0.247  Sum_probs=33.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~   39 (298)
                      ++.||.++|.|-|.-+|+-++..|.++|++|.++.+.
T Consensus       156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~  192 (285)
T PRK10792        156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF  192 (285)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC
Confidence            3679999999999999999999999999999998765

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=92.96  E-value=0.73  Score=41.63  Aligned_cols=30  Identities=27%  Similarity=0.488  Sum_probs=25.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEec
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTAR   38 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~-~Vii~~r   38 (298)
                      +|+|.|+ ||+|.++++.|+..|. ++.+++.
T Consensus         1 kVlVVGa-GGlG~eilknLal~Gvg~I~IvD~   31 (291)
T cd01488           1 KILVIGA-GGLGCELLKNLALSGFRNIHVIDM   31 (291)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            3678875 8999999999999997 5777764

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	298
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		9e-81
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		7e-42
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		1e-40
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		6e-39
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		4e-38
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		4e-15
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-11
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		4e-11
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		9e-11
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-10
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		3e-10
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		2e-09
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		3e-09
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		3e-09
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		5e-09
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		5e-09
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		5e-09
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		5e-09
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		6e-09
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		6e-09
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		6e-09
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		6e-09
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		7e-09
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		7e-09
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		7e-09
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		1e-08
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		1e-08
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-08
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-08
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		2e-08
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		2e-08
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		3e-08
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		3e-08
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		3e-08
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		4e-08
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		4e-08
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		4e-08
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		9e-08
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		1e-07
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		1e-07
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-07
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		3e-07
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		3e-07
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		3e-07
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		6e-07
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		6e-07
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		6e-07
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		6e-07
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		8e-07
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		8e-07
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		8e-07
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		8e-07
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		8e-07
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		1e-06
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		1e-06
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-06
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		1e-06
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		2e-06
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		3e-06
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		3e-06
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		3e-06
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		3e-06
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		3e-06
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-06
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		4e-06
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		5e-06
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		5e-06
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-06
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		7e-06
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-06
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		8e-06
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		8e-06
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		1e-05
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		2e-05
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		3e-05
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		3e-05
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-05
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		4e-05
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		4e-05
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		5e-05
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		5e-05
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		5e-05
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		6e-05
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		7e-05
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		8e-05
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		8e-05
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		9e-05
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		9e-05
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		1e-04
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		1e-04
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		1e-04
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		1e-04
1yo6_A	250	Crystal Structure Of The Putative Carbonyl Reductas		1e-04
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		1e-04
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		1e-04
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-04
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-04
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		2e-04
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		2e-04
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		3e-04
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-04
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		3e-04
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		3e-04
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		4e-04
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-04
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		5e-04
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-04
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		6e-04
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		6e-04
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		6e-04
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		6e-04
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		7e-04
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		7e-04
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		7e-04

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score =  296 bits (758), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 159/302 (52%), Positives = 204/302 (67%), Gaps = 11/302 (3%)
Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           ++ AVVTG NKGIGFE  +QL+S GI VVLT RD  +G EAVEKLK S  + E ++FHQL
Sbjct: 12  RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS--NHENVVFHQL 69
Query: 66  DISD-LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAF-------ADSGYQITKGD 117
           D++D +A++SSLADFIKT FGKLDIL NNAG+A    D D F        +   ++ K  
Sbjct: 70  DVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIY 129
Query: 118 AEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
            + +  ++  +TYELA ECLK NY G K   E LIPLL+LSDSPR+VN+SS   +LK + 
Sbjct: 130 EKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVS 189
Query: 178 -EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI 236
            E A  +LGD + LTEERI+MVV    KD++E  I   GW    +AY  SKA +NAYTR+
Sbjct: 190 NETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV 249
Query: 237 LAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEA 296
           LA + PKF VNCVCPG VKT++N+  G  + EEGAE  V++AL PD GP+G F+   E +
Sbjct: 250 LANKIPKFQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVVRIALFPDDGPSGFFYDCSELS 309
Query: 297 PF 298
            F
Sbjct: 310 AF 311

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score =  167 bits (422), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 118/300 (39%), Positives = 162/300 (54%), Gaps = 50/300 (16%)
Query: 9   AVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
           A+VTG NKGIG   VR L       VVLTARD  RG  AV++L+A G+ P    FHQLDI
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPR---FHQLDI 63
Query: 68  SDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCY 127
            DL S+ +L DF++ ++G LD+L NNAGIA    D   F           AEV       
Sbjct: 64  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQ--------AEV------- 108
Query: 128 QTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS--ALK----DLPEKAR 181
                    +KTN++GT+  C  L+PL++     R+VN+SS +S  ALK    +L +K R
Sbjct: 109 --------TMKTNFFGTRDVCTELLPLIKPQG--RVVNVSSIMSVRALKSCSPELQQKFR 158
Query: 182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 241
           +     E +TEE +  ++  + +D ++G     GW   SSAY V+K  +   +RI A++ 
Sbjct: 159 S-----ETITEEELVGLMNKFVEDTKKGVHQKEGW--PSSAYGVTKIGVTVLSRIHARKL 211
Query: 242 P------KFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRK 293
                  K  +N  CPG+V+TD+       S EEGAE+PV LALLP    GP G+F   K
Sbjct: 212 SEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK 271

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score =  162 bits (411), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/300 (39%), Positives = 161/300 (53%), Gaps = 50/300 (16%)
Query: 9   AVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
           A+VTG NKGIG   VR L       VVLTARD  RG  AV++L+A G+ P    FHQLDI
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPR---FHQLDI 63
Query: 68  SDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCY 127
            DL S+ +L DF++ ++G LD+L NNAGIA    D   F           AEV       
Sbjct: 64  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQ--------AEV------- 108
Query: 128 QTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS--ALK----DLPEKAR 181
                    +KTN++GT+     L+PL++     R+VN+SS +S  ALK    +L +K R
Sbjct: 109 --------TMKTNFFGTRDVXTELLPLIKPQG--RVVNVSSIMSVRALKSCSPELQQKFR 158
Query: 182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 241
           +     E +TEE +  ++  + +D ++G     GW   SSAY V+K  +   +RI A++ 
Sbjct: 159 S-----ETITEEELVGLMNKFVEDTKKGVHQKEGWP--SSAYGVTKIGVTVLSRIHARKL 211
Query: 242 P------KFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRK 293
                  K  +N  CPG+V+TD+       S EEGAE+PV LALLP    GP G+F   K
Sbjct: 212 SEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK 271

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score =  157 bits (397), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/303 (37%), Positives = 163/303 (53%), Gaps = 44/303 (14%)
Query: 4   ATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +  + A+VTG+NKGIGF  VR L  +    VVLTARD  RG  AV++L+A G+ P    F
Sbjct: 2   SNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPR---F 58
Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDW 122
           HQLDI DL S+ +L DF++ ++G LD+L NNA IA   F +D    + + I    AE+  
Sbjct: 59  HQLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIA---FQLD--NPTPFHI---QAEL-- 108
Query: 123 SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSY--VSALKDL-PEK 179
                         +KTN+ GT+  C  L+PL++     R+VN+SS   V AL +  PE 
Sbjct: 109 -------------TMKTNFMGTRNVCTELLPLIKPQG--RVVNVSSTEGVRALNECSPEL 153
Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
            +      E +TEE +  ++  + +D + G     GW    S Y V+K  ++  +RI A+
Sbjct: 154 QQKF--KSETITEEELVGLMNKFVEDTKNGVHRKEGW--SDSTYGVTKIGVSVLSRIYAR 209
Query: 240 RY------PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFL 291
           +        K  +N  CPG+V+TD+       S E GAE+PV LALLP    GP G+F  
Sbjct: 210 KLREQRAGDKILLNACCPGWVRTDMGGPKAPKSPEVGAETPVYLALLPSDAEGPHGQFVT 269
Query: 292 RKE 294
            K+
Sbjct: 270 DKK 272

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score =  154 bits (390), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/288 (36%), Positives = 155/288 (53%), Gaps = 48/288 (16%)
Query: 7   KYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           + A+VTG+N+GIG    R+L  +    VVLTARD  RG  AV++L+A G+ P    FHQL
Sbjct: 3   RVALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPR---FHQL 59
Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           DI DL S+ +L DF++ ++G L++L NNA +A    D   F D   ++T           
Sbjct: 60  DIDDLQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPF-DIKAEMT----------- 107
Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS------YVSALKDLPEK 179
                      LKTN++ T+  C  L+P+++     R+VN+SS      + +  +DL E+
Sbjct: 108 -----------LKTNFFATRNMCNELLPIMK--PHGRVVNISSLQCLRAFENCSEDLQER 154
Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
             +     E LTE  +  ++K + +D +       GW   +S Y VSK  +   +RILA+
Sbjct: 155 FHS-----ETLTEGDLVDLMKKFVEDTKNEVHEREGW--PNSPYGVSKLGVTVLSRILAR 207
Query: 240 RY------PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLP 281
           R        +  VN  CPG VKTD++    I +VEEGAE+PV LALLP
Sbjct: 208 RLDEKRKADRILVNACCPGPVKTDMDGKDSIRTVEEGAETPVYLALLP 255

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 78/260 (30%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-GVDPELLLFHQL 65
           + A+VTG ++G+GF   + LA  G +VV+ +R+ +   EA +KL    GV+    +  + 
Sbjct: 22  RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVET---MAFRC 78
Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGI----ASVKFDMDAFADSGYQITKGDAEVD 121
           D+S+   V  L + +K +FGKLD + N AGI     + +F +D F               
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFR-------------- 124
Query: 122 WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR 181
                        + ++ N +GT   C     LL  SD+P ++N+ S             
Sbjct: 125 -------------QVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS------------- 158
Query: 182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 241
                   LT E + M                    P+ SAY  SK  + + T+ LAK +
Sbjct: 159 --------LTVEEVTM--------------------PNISAYAASKGGVASLTKALAKEW 190
Query: 242 PKFC--VNCVCPGFVKTDIN 259
            ++   VN + PG+ +T + 
Sbjct: 191 GRYGIRVNVIAPGWYRTKMT 210

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 98/258 (37%), Gaps = 73/258 (28%)
Query: 2   AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLL 61
           AE   K A++TG+  GIG ET R LA  G  VVL    E     A   +    V      
Sbjct: 7   AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAV------ 60
Query: 62  FHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVD 121
            H +D+++  SV +L DF    FG+LDI+ NNA          A +D    +        
Sbjct: 61  HHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNA----------AHSDPADML-------- 102
Query: 122 WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVS-ALKDLPEKA 180
              V   T ++  +    N  GT   C+  IP L  +    +VN+SS  + A  D+    
Sbjct: 103 ---VTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDM---- 155
Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                                                  S+AY  +KA I   TR +A +
Sbjct: 156 ---------------------------------------STAYACTKAAIETLTRYVATQ 176
Query: 241 YPKFCVNC--VCPGFVKT 256
           Y +  V C  + PG V+T
Sbjct: 177 YGRHGVRCNAIAPGLVRT 194

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 98/255 (38%), Gaps = 71/255 (27%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
           K A+VTG+++GIG     QLA +G  V +     K   EAV E++KA GVD   +   Q 
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI---QA 67
Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           +++D   V ++   + +QFG LD+L NNAGI      M               E +W  V
Sbjct: 68  NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRM------------KEQEWDDV 115
Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      + TN  G     +   P +    S  ++NLSS V A+ +          
Sbjct: 116 -----------IDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN---------- 154
Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK-- 243
                                           P  + Y  +KA +   T+  A+      
Sbjct: 155 --------------------------------PGQANYVATKAGVIGLTKSAARELASRG 182
Query: 244 FCVNCVCPGFVKTDI 258
             VN V PGF+ +D+
Sbjct: 183 ITVNAVAPGFIVSDM 197

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 12/103 (11%)
Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           ++  V+TG+N G+G  T R+LA +G TV++  RD ++G EA  +  A  V+       +L
Sbjct: 16  QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKG-EAAARTMAGQVE-----VREL 69
Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDM--DAF 106
           D+ DL+SV   AD +       D+L NNAGI +V + +  D F
Sbjct: 70  DLQDLSSVRRFADGVS----GADVLINNAGIMAVPYALTVDGF 108

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 102/256 (39%), Gaps = 72/256 (28%)
Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQ 64
           K+ A+VTG+++GIG     +LA +G  V+ TA  E  G E +    K +G++    +   
Sbjct: 28  KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEA-GAEGIGAAFKQAGLEGRGAV--- 83
Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           L+++D  +V +L +    +FG L++L NNAGI   +  M    D            +W  
Sbjct: 84  LNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDD------------EWDA 131
Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           V           + TN     +   A++  +  +   R+VN++S              V+
Sbjct: 132 V-----------IDTNLKAVFRLSRAVLRPMMKARGGRIVNITS--------------VV 166
Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK- 243
           G   N                            P    Y  +KA +   TR LA+     
Sbjct: 167 GSAGN----------------------------PGQVNYAAAKAGVAGMTRALAREIGSR 198
Query: 244 -FCVNCVCPGFVKTDI 258
              VNCV PGF+ TD+
Sbjct: 199 GITVNCVAPGFIDTDM 214

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-LKASGVDPEL 59
           M+  + + AVVTG+++GIG    R+L S G  VVLTARD ++ L AVE+ + A+G + E 
Sbjct: 24  MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEK-LRAVEREIVAAGGEAE- 81
Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGI 96
              H  D+S   ++++ A  +    G+ D+L NNAG+
Sbjct: 82  --SHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGV 116

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 97/254 (38%), Gaps = 71/254 (27%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
           K A+VTG+++GIG     QLA +G  V +     K   EAV E++KA GVD   +   Q 
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI---QA 61
Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           +++D   V +    + +QFG LD+L NNAGI           D+     K   E +W  V
Sbjct: 62  NVADADEVKAXIKEVVSQFGSLDVLVNNAGITR---------DNLLXRXK---EQEWDDV 109
Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      + TN  G     +   P      S  ++NLSS V A+ +          
Sbjct: 110 -----------IDTNLKGVFNCIQKATPQXLRQRSGAIINLSSVVGAVGN---------- 148
Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK-- 243
                                           P  + Y  +KA +   T+  A+      
Sbjct: 149 --------------------------------PGQANYVATKAGVIGLTKSAARELASRG 176
Query: 244 FCVNCVCPGFVKTD 257
             VN V PGF+ +D
Sbjct: 177 ITVNAVAPGFIVSD 190

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 108/264 (40%), Gaps = 76/264 (28%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 21  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD-- 78
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D+  +  + +L   +  ++G +D+L NNAG                    G A  
Sbjct: 79  -GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPG-----------------GGATA 120
Query: 121 DWSKVCYQTYELAVECLKTNYYG----TKQTCEALIPLLELSDSPRLVNLSSYVSALKDL 176
           + +       EL ++ ++TN  G    TKQ  +A   +LE   + R+VN++S        
Sbjct: 121 ELAD------ELWLDVVETNLTGVFRVTKQVLKAG-GMLE-RGTGRIVNIAST------- 165
Query: 177 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI 236
                   G  + L                            H++ Y  SK  +  +T+ 
Sbjct: 166 --------GGKQGLV---------------------------HAAPYSASKHGVVGFTKA 190
Query: 237 LAKRYPK--FCVNCVCPGFVKTDI 258
           L     +    VN VCPGFV+T +
Sbjct: 191 LGLELARTGITVNAVCPGFVETPM 214

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
          +K A+VTG+++GIGFE    LASKG TVV TA  +    +     K  G     L+   L
Sbjct: 5  EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLV---L 61
Query: 66 DISDLASVSSLADFIKTQFGKLDILANNAGI 96
          +ISD+ S+ +    IK +   +DIL NNAGI
Sbjct: 62 NISDIESIQNFFAEIKAENLAIDILVNNAGI 92

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 113/268 (42%), Gaps = 79/268 (29%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA++G  V+ TA  E  G +A+      G + + L+   L+
Sbjct: 6   KIALVTGASRGIGRAIAETLAARGAKVIGTATSEN-GAQAISDYL--GANGKGLM---LN 59
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++D AS+ S+ + I+ +FG++DIL NNAGI      M               + +W+   
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRM------------KDEEWN--- 104
Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                   + ++TN     +  +A++  +      R++ + S V                
Sbjct: 105 --------DIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVV---------------- 140
Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--F 244
                                 G + N G   +++A    KA +  +++ LA+       
Sbjct: 141 ----------------------GTMGNGGQANYAAA----KAGLIGFSKSLAREVASRGI 174
Query: 245 CVNCVCPGFVKTDI------NFHAGILS 266
            VN V PGF++TD+      +  AGIL+
Sbjct: 175 TVNVVAPGFIETDMTRALSDDQRAGILA 202

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 100/258 (38%), Gaps = 63/258 (24%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M   + K  ++TGS+ GIG  T    A +G  V +T R  +R  E  + +  SGV  + +
Sbjct: 1   MPRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQV 60
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D++       + +    QFGK+D+L NNAG A      DAF  +G          
Sbjct: 61  NSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIP----DAFGTTGTD-------- 108
Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
                  Q  ++  + LK N     +  + + P L ++    +VN+SS V+  +  P   
Sbjct: 109 -------QGIDIYHKTLKLNLQAVIEMTKKVKPHL-VASKGEIVNVSSIVAGPQAQP--- 157
Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                               D+                    Y ++KA ++ YTR  A  
Sbjct: 158 --------------------DFLY------------------YAIAKAALDQYTRSTAID 179
Query: 241 YPKFC--VNCVCPGFVKT 256
             KF   VN V PG V+T
Sbjct: 180 LAKFGIRVNSVSPGMVET 197

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 102/257 (39%), Gaps = 73/257 (28%)
Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVE-KLKASGVDPELLLFH 63
           T K A+VTG+++GIG     +LAS G TVV+    +    E V  K++A+G      L  
Sbjct: 26  TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKA---LTA 82
Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWS 123
           Q D+SD A+V  L    +  FG +D+L NNAGI      +   A++      GDA  D  
Sbjct: 83  QADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXP----LTTIAET------GDAVFD-- 130
Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV 183
                        +  N  GT  T                         L++  ++ R V
Sbjct: 131 -----------RVIAVNLKGTFNT-------------------------LREAAQRLR-V 153
Query: 184 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK--RY 241
            G + N +  ++ ++                   P    Y  +KA + A T +L+K  R 
Sbjct: 154 GGRIINXSTSQVGLL------------------HPSYGIYAAAKAGVEAXTHVLSKELRG 195
Query: 242 PKFCVNCVCPGFVKTDI 258
               VN V PG   TD+
Sbjct: 196 RDITVNAVAPGPTATDL 212

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 103/271 (38%), Gaps = 72/271 (26%)
Query: 2   AEATKKYAVVTGSNKGIGFETVRQLASKGITV-VLTARDEKRGLEAVEKLKASGVDPELL 60
           + A  +  +VTG++KGIG    RQLA+ G  + V   RD     E +  + A+G +  LL
Sbjct: 22  SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLL 81
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
            F   D+++      + +    Q G    + +NAGIA          D+ +     D   
Sbjct: 82  SF---DVANREQCREVLEHEIAQHGAWYGVVSNAGIAR---------DAAFPALSND--- 126
Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
           DW  V +   +        ++Y   Q C  ++P++      R++ LSS            
Sbjct: 127 DWDAVIHTNLD--------SFYNVIQPC--IMPMIGARQGGRIITLSSV----------- 165
Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                                       G + NRG   +S+A         A    LAKR
Sbjct: 166 ---------------------------SGVMGNRGQVNYSAAKAGIIGATKALAIELAKR 198
Query: 241 YPKFCVNCVCPGFVKTDINFHAGILSVEEGA 271
             K  VNC+ PG + T      G++ +EE A
Sbjct: 199 --KITVNCIAPGLIDT------GMIEMEESA 221

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 109/264 (41%), Gaps = 76/264 (28%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 21  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD-- 78
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D+  +  + +L   +  ++G +D+L NNAG                    G A  
Sbjct: 79  -GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPG-----------------GGATA 120
Query: 121 DWSKVCYQTYELAVECLKTNYYG----TKQTCEALIPLLELSDSPRLVNLSSYVSALKDL 176
           + +       EL ++ ++TN  G    TKQ  +A   +LE   + R+VN++S        
Sbjct: 121 ELAD------ELWLDVVETNLTGVFRVTKQVLKAG-GMLE-RGTGRIVNIAS-------- 164
Query: 177 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI 236
                                         ++G +       H++ Y  SK  +  +T+ 
Sbjct: 165 ---------------------------TGGKQGVV-------HAAPYSASKHGVVGFTKA 190
Query: 237 LAKRYPK--FCVNCVCPGFVKTDI 258
           L     +    VN VCPGFV+T +
Sbjct: 191 LGLELARTGITVNAVCPGFVETPM 214

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 106/264 (40%), Gaps = 76/264 (28%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 21  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD-- 78
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D+  +  + +L   +  ++G +D+L NNAG    +    A A+            
Sbjct: 79  -GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG----RLGGGATAE------------ 121
Query: 121 DWSKVCYQTYELAVECLKTNYYG----TKQTCEALIPLLELSDSPRLVNLSSYVSALKDL 176
                     EL ++ ++TN  G    TKQ  +A   +LE   + R+VN++S        
Sbjct: 122 -------LADELWLDVVETNLTGVFRVTKQVLKAG-GMLE-RGTGRIVNIAS-------- 164
Query: 177 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI 236
                                                +    H++ Y  SK  +  +T+ 
Sbjct: 165 ----------------------------------TGGKQGVVHAAPYSASKHGVVGFTKA 190
Query: 237 LAKRYPK--FCVNCVCPGFVKTDI 258
           L     +    VN VCPGFV+T +
Sbjct: 191 LGLELARTGITVNAVCPGFVETPM 214

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 109/264 (41%), Gaps = 76/264 (28%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 21  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD-- 78
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D+  +  + +L   +  ++G +D+L NNAG                    G A  
Sbjct: 79  -GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPG-----------------GGATA 120
Query: 121 DWSKVCYQTYELAVECLKTNYYG----TKQTCEALIPLLELSDSPRLVNLSSYVSALKDL 176
           + +       EL ++ ++TN  G    TKQ  +A   +LE   + R+VN++S        
Sbjct: 121 ELAD------ELWLDVVETNLTGVFRVTKQVLKAG-GMLE-RGTGRIVNIAS-------- 164
Query: 177 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI 236
                                         ++G +       H++ Y  SK  +  +T+ 
Sbjct: 165 ---------------------------TGGKQGVV-------HAAPYSASKHGVVGFTKA 190
Query: 237 LAKRYPK--FCVNCVCPGFVKTDI 258
           L     +    VN VCPGFV+T +
Sbjct: 191 LGLELARTGITVNAVCPGFVETPM 214

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 106/264 (40%), Gaps = 76/264 (28%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 17  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD-- 74
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D+  +  + +L   +  ++G +D+L NNAG    +    A A+            
Sbjct: 75  -GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG----RLGGGATAE------------ 117
Query: 121 DWSKVCYQTYELAVECLKTNYYG----TKQTCEALIPLLELSDSPRLVNLSSYVSALKDL 176
                     EL ++ ++TN  G    TKQ  +A   +LE   + R+VN++S        
Sbjct: 118 -------LADELWLDVVETNLTGVFRVTKQVLKAG-GMLE-RGTGRIVNIAS-------- 160
Query: 177 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI 236
                                                +    H++ Y  SK  +  +T+ 
Sbjct: 161 ----------------------------------TGGKQGVVHAAPYSASKHGVVGFTKA 186
Query: 237 LAKRYPK--FCVNCVCPGFVKTDI 258
           L     +    VN VCPGFV+T +
Sbjct: 187 LGLELARTGITVNAVCPGFVETPM 210

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 109/264 (41%), Gaps = 76/264 (28%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 17  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD-- 74
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D+  +  + +L   +  ++G +D+L NNAG                    G A  
Sbjct: 75  -GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPG-----------------GGATA 116
Query: 121 DWSKVCYQTYELAVECLKTNYYG----TKQTCEALIPLLELSDSPRLVNLSSYVSALKDL 176
           + +       EL ++ ++TN  G    TKQ  +A   +LE   + R+VN++S        
Sbjct: 117 ELAD------ELWLDVVETNLTGVFRVTKQVLKAG-GMLE-RGTGRIVNIAS-------- 160
Query: 177 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI 236
                                         ++G +       H++ Y  SK  +  +T+ 
Sbjct: 161 ---------------------------TGGKQGVV-------HAAPYSASKHGVVGFTKA 186
Query: 237 LAKRYPK--FCVNCVCPGFVKTDI 258
           L     +    VN VCPGFV+T +
Sbjct: 187 LGLELARTGITVNAVCPGFVETPM 210

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 106/264 (40%), Gaps = 76/264 (28%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 1   MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD-- 58
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D+  +  + +L   +  ++G +D+L NNAG                    G A  
Sbjct: 59  -GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPG-----------------GGATA 100
Query: 121 DWSKVCYQTYELAVECLKTNYYG----TKQTCEALIPLLELSDSPRLVNLSSYVSALKDL 176
           + +       EL ++ ++TN  G    TKQ  +A   +LE   + R+VN++S        
Sbjct: 101 ELAD------ELWLDVVETNLTGVFRVTKQVLKAG-GMLE-RGTGRIVNIAS-------- 144
Query: 177 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI 236
                                                +    H++ Y  SK  +  +T+ 
Sbjct: 145 ----------------------------------TGGKQGVVHAAPYSASKHGVVGFTKA 170
Query: 237 LAKRYPK--FCVNCVCPGFVKTDI 258
           L     +    VN VCPGFV+T +
Sbjct: 171 LGLELARTGITVNAVCPGFVETPM 194

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 43/182 (23%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV--EKLKASGVDPELLLFHQ 64
           K  ++TG++ GIG    R+L   G  ++L AR + R +EA+  E   A G      L   
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQAR-IEAIATEIRDAGGT----ALAQV 59
Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGI------ASVKFDMDAFADSGYQITKGDA 118
           LD++D  SV++ A      +G++D+L NNAG+      A+VK D                
Sbjct: 60  LDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVD---------------- 103
Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
             +W ++           +  N  G      A++P++E   S +++N+ S + AL  +P 
Sbjct: 104 --EWERM-----------IDVNIKGVLWGIGAVLPIMEAQRSGQIINIGS-IGALSVVPT 149
Query: 179 KA 180
            A
Sbjct: 150 AA 151

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 104/258 (40%), Gaps = 77/258 (29%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
           K A+VTGS++G+G     +L + G  +VL        L+A  E+ KA+G++   ++  + 
Sbjct: 6   KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGIN---VVVAKG 62
Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIA--SVKFDMDAFADSGYQITKGDAEVDWS 123
           D+ +   V ++       FG++DIL NNAGI   ++   M              +E DW 
Sbjct: 63  DVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKM--------------SEKDWD 108
Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV 183
            V           LK+ Y  TK   + ++       S +++N++S               
Sbjct: 109 DVLNTN-------LKSAYLCTKAVSKIMLK----QKSGKIINITSIA------------- 144
Query: 184 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK 243
                                    G I N G     + Y  SKA +  +T+ +AK +  
Sbjct: 145 -------------------------GIIGNAG----QANYAASKAGLIGFTKSIAKEFAA 175
Query: 244 ---FCVNCVCPGFVKTDI 258
              +C N V PG +KTD+
Sbjct: 176 KGIYC-NAVAPGIIKTDM 192

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 79/268 (29%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA++G  V+ TA  E  G +A+      G + + L+   L+
Sbjct: 6   KIALVTGASRGIGRAIAETLAARGAKVIGTATSEN-GAQAISDYL--GANGKGLM---LN 59
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++D AS+ S+ + I+ +FG++DIL NNAGI      M               + +W+   
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRM------------KDEEWN--- 104
Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                   + ++TN     +  +A++  +      R++ + S V                
Sbjct: 105 --------DIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVV---------------- 140
Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--F 244
                                 G + N G    ++A    KA +  +++ LA+       
Sbjct: 141 ----------------------GTMGNGGQANFAAA----KAGLIGFSKSLAREVASRGI 174
Query: 245 CVNCVCPGFVKTDI------NFHAGILS 266
            VN V PGF++TD+      +  AGIL+
Sbjct: 175 TVNVVAPGFIETDMTRALSDDQRAGILA 202

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-GVDPELLLFH 63
           + K AV+TGS+ GIG       A +G  +VL AR   R  EA   LK   GV    +L  
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVR---VLEV 62
Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQ 112
            +D++    V ++ + +++ FG  DIL NNAG  S +  M+A AD  +Q
Sbjct: 63  AVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEA-ADEKWQ 110

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-GVDPELLLFH 63
           + K AV+TGS+ GIG       A +G  +VL AR   R  EA   LK   GV    +L  
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVR---VLEV 62
Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQ 112
            +D++    V ++ + +++ FG  DIL NNAG  S +  M+A AD  +Q
Sbjct: 63  AVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEA-ADEKWQ 110

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 109/264 (41%), Gaps = 76/264 (28%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 21  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEAD-- 78
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D+  +  + +L   +  ++G +D+L NNAG                    G A  
Sbjct: 79  -GRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPG-----------------GGATA 120
Query: 121 DWSKVCYQTYELAVECLKTNYYG----TKQTCEALIPLLELSDSPRLVNLSSYVSALKDL 176
           + +       EL ++ ++TN  G    TKQ  +A   +LE   + R+VN++S        
Sbjct: 121 ELAD------ELWLDVVETNLTGVFRVTKQVLKAG-GMLE-RGTGRIVNIAS-------- 164
Query: 177 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI 236
                                         ++G +       H++ Y  SK  +  +T+ 
Sbjct: 165 ---------------------------TGGKQGVV-------HAAPYSASKHGVVGFTKA 190
Query: 237 LAKRYPK--FCVNCVCPGFVKTDI 258
           L     +    VN VCPG+V+T +
Sbjct: 191 LGLELARTGITVNAVCPGWVETPM 214

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTG+++GIG      LA++G  V+ TA  E  G +A+      G + + L+   L+
Sbjct: 6  KIALVTGASRGIGRAIAETLAARGAKVIGTATSEN-GAQAISDYL--GANGKGLM---LN 59
Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGI 96
          ++D AS+ S+ + I+ +FG++DIL NNAGI
Sbjct: 60 VTDPASIESVLEKIRAEFGEVDILVNNAGI 89

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 78/179 (43%), Gaps = 36/179 (20%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA  + K  ++TGS+ GIG       A +G  V +T R+E R  E  +++  +GV  E +
Sbjct: 21  MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKI 80
Query: 61  LFHQLDISDLASVSSLADFIKT---QFGKLDILANNAGIASVKFDMDAFADSGYQITKGD 117
                 ++D+   S   D I T   +FGK+DIL NNA               G  +  G 
Sbjct: 81  ---NAVVADVTEASGQDDIINTTLAKFGKIDILVNNA---------------GANLADGT 122
Query: 118 AEVDWSKVCYQTYELAVECLKTNYYG----TKQTCEALIPLLELSDSPRLVNLSSYVSA 172
           A  D      Q  EL  +  K N+      T++T E LI          +VN+SS V+ 
Sbjct: 123 ANTD------QPVELYQKTFKLNFQAVIEMTQKTKEHLI-----KTKGEIVNVSSIVAG 170

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 99/258 (38%), Gaps = 63/258 (24%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M    +K A++TGS+ GIG  T    A +G  V +T R  +R  E  +++ A+GV  + +
Sbjct: 1   MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNV 60
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D++  A    +      +FGKLDIL NNAG         A  DS  Q   G A+ 
Sbjct: 61  NSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGA--------AIPDS--QSKTGTAQ- 109
Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
                  ++Y+     L  N        +  +P L  S    +VN+SS  S L   P+  
Sbjct: 110 -----SIESYD---ATLNLNLRSVIALTKKAVPHLS-STKGEIVNISSIASGLHATPD-- 158
Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                                                P+   Y ++KA I+ YTR  A  
Sbjct: 159 ------------------------------------FPY---YSIAKAAIDQYTRNTAID 179
Query: 241 YPKFC--VNCVCPGFVKT 256
             +    VN + PG V T
Sbjct: 180 LIQHGIRVNSISPGLVAT 197

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV--EKLKASGVDPELLLFHQ 64
           K AV+TG+++GIG    R LA  G  + L AR   R LE +  E ++  GV+   + +H 
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVDR-LEKIAHELMQEQGVE---VFYHH 58
Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVK 100
           LD+S   SV   +  +  +FG +D++  NAG+   K
Sbjct: 59  LDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFK 94

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 98/254 (38%), Gaps = 70/254 (27%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG     +L   G  V+ TA       +  E LKA+GV+   L+   LD
Sbjct: 28  KVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLV---LD 84
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +S   SV++  + I+   G+  I+ NNAGI      +    D            +W    
Sbjct: 85  VSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDD------------EW---- 128
Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                   + + TN     +  +A++  +  +   R++N+ S V A+ +  +        
Sbjct: 129 -------FDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQ-------- 173
Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--F 244
                                             + Y  +KA +  +TR LA+       
Sbjct: 174 ----------------------------------TNYAAAKAGLEGFTRALAREVGSRAI 199
Query: 245 CVNCVCPGFVKTDI 258
            VN V PGF+ TD+
Sbjct: 200 TVNAVAPGFIDTDM 213

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV--EKLKASGVDPELLLFHQ 64
           K AV+TG+++GIG    R LA  G  + L AR   R LE +  E ++  GV+   + +H 
Sbjct: 25  KVAVITGASRGIGEAIARALARDGYALALGARSVDR-LEKIAHELMQEQGVE---VFYHH 80
Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVK 100
           LD+S   SV   +  +  +FG +D++  NAG+   K
Sbjct: 81  LDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFK 116

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 94/256 (36%), Gaps = 77/256 (30%)
Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           A+VTG +KGIG+  V +LA  G  V   +R+EK   E +E  +  G++ E        + 
Sbjct: 24  ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVE------GSVC 77
Query: 69  DLASVSSLADFIKTQF----GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           DL S +     ++T      GKL+IL NNAG+   K   D F +  Y I  G        
Sbjct: 78  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKD-FTEKDYNIIMG-------- 128
Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
                         TN+       +   PLL+ S +  ++ LSS                
Sbjct: 129 --------------TNFEAAYHLSQIAYPLLKASQNGNVIFLSS---------------- 158
Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK- 243
                                     IA     P  S Y  SK  IN  T+ LA  + K 
Sbjct: 159 --------------------------IAGFSALPSVSLYSASKGAINQMTKSLACEWAKD 192
Query: 244 -FCVNCVCPGFVKTDI 258
              VN V PG + T +
Sbjct: 193 NIRVNSVAPGVILTPL 208

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 99/255 (38%), Gaps = 71/255 (27%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A+VTG+++GIG      LA +G  VV+  A +E++  E V+++K  G D    +  + 
Sbjct: 5   KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDA---IAVRA 61
Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D+++   V+++       FG++DIL NNAG+      M               E +W  V
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRM------------KEEEWDTV 109
Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      + TN  G     +A+   +      R+VN++S V            V G
Sbjct: 110 -----------INTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVV-----------GVTG 147
Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--K 243
           +                               P  + Y  +KA +   T+  AK      
Sbjct: 148 N-------------------------------PGQANYVAAKAGVIGLTKTSAKELASRN 176
Query: 244 FCVNCVCPGFVKTDI 258
             VN + PGF+ TD+
Sbjct: 177 ITVNAIAPGFIATDM 191

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 100/260 (38%), Gaps = 81/260 (31%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL------KASGVDPELL 60
           K ++VTGS +GIG     +LAS G TV++T    +R     E++      KA GV+  LL
Sbjct: 8   KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLL 67
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
               ++      + +L D I       DIL NNAGI   K  +              + +
Sbjct: 68  SEESIN-KAFEEIYNLVDGI-------DILVNNAGITRDKLFLRM------------SLL 107
Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
           DW            E LK N  GT    +  +  +      R+VN+SS V          
Sbjct: 108 DWE-----------EVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVV---------- 146
Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                                       G   N G   +S+    +KA +  +T+ LAK 
Sbjct: 147 ----------------------------GFTGNVGQVNYST----TKAGLIGFTKSLAKE 174
Query: 241 Y-PK-FCVNCVCPGFVKTDI 258
             P+   VN V PGF++TD+
Sbjct: 175 LAPRNVLVNAVAPGFIETDM 194

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTGS  GIG    + LA  G  +VL    +     A+ ++   GV     + H  D
Sbjct: 5  KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKA---VHHPAD 59
Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGIASV 99
          +SD+A + +L    + +FG +DIL NNAGI  V
Sbjct: 60 LSDVAQIEALFALAEREFGGVDILVNNAGIQHV 92

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          + A VTG   G+G   VRQL ++G  V +    +    +A+  L+A G  PE++   QLD
Sbjct: 9  RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGV-QLD 67
Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGI 96
          ++        AD ++ +FG + IL NNAG+
Sbjct: 68 VASREGFKMAADEVEARFGPVSILCNNAGV 97

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 95/266 (35%), Gaps = 79/266 (29%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL- 65
           K A+V G   G G  TVR+L   G  V+LT R+E       E+       P +   H L 
Sbjct: 9   KKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRV---HALR 60
Query: 66  -DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            DI+DL  ++ L        G +D+L  NAG++ ++                     + +
Sbjct: 61  SDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELE--------------------PFDQ 100
Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           V   +Y+        N  G   T + L PL+    S  +V  SS                
Sbjct: 101 VSEASYD---RQFAVNTKGAFFTVQRLTPLIREGGS--IVFTSS---------------- 139
Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR-YPK 243
                                     +A+ G  P  S Y  SKA + ++  +LA    P+
Sbjct: 140 --------------------------VADEGGHPGXSVYSASKAALVSFASVLAAELLPR 173
Query: 244 -FCVNCVCPGFVKTDINFHAGILSVE 268
              VN V PGF+ T     AGI   E
Sbjct: 174 GIRVNSVSPGFIDTPTKGVAGITEAE 199

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 95/266 (35%), Gaps = 79/266 (29%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL- 65
           K A+V G   G G  TVR+L   G  V+LT R+E       E+       P +   H L 
Sbjct: 8   KKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRV---HALR 59
Query: 66  -DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            DI+DL  ++ L        G +D+L  NAG++ ++                     + +
Sbjct: 60  SDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELE--------------------PFDQ 99
Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           V   +Y+        N  G   T + L PL+    S  +V  SS                
Sbjct: 100 VSEASYD---RQFAVNTKGAFFTVQRLTPLIREGGS--IVFTSS---------------- 138
Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR-YPK 243
                                     +A+ G  P  S Y  SKA + ++  +LA    P+
Sbjct: 139 --------------------------VADEGGHPGXSVYSASKAALVSFASVLAAELLPR 172
Query: 244 -FCVNCVCPGFVKTDINFHAGILSVE 268
              VN V PGF+ T     AGI   E
Sbjct: 173 GIRVNSVSPGFIDTPTKGVAGITEAE 198

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 40/218 (18%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT---ARDEKRGLEAVEKLKASGVDPELLLFH 63
           K AV+TGS  GIG    R LA  G  +VL    A DE R +      + +G+    +L H
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTD----EVAGLSSGTVLHH 81
Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVK----FDMDAF-------ADSGYQ 112
             D +  + ++     +  +FG  DIL NNAG+  V+    F ++ +         S + 
Sbjct: 82  PADXTKPSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFH 141
Query: 113 ITKG----DAEVDWSKV--CYQTYELAVECLKTNYYGTKQTCEALIPL--LELSDSPRLV 164
             +G      +  W ++      + L     K+ Y   K     L     LE+++S   V
Sbjct: 142 TIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESGVTV 201
Query: 165 N-------LSSYVSALKDLPEKARAVLGDVENLTEERI 195
           N       L+  V   K +P++AR        +TEE++
Sbjct: 202 NSICPGYVLTPLVE--KQIPDQAR-----TRGITEEQV 232

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           A+VTG ++GIG+  V +LAS G +V   +R++K   + + + ++ G   E  +    D+S
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV---CDLS 67
Query: 69  DLASVSSLADFIKTQF-GKLDILANNAGIASVK 100
             +    L + +   F GKL+IL NNAGI   K
Sbjct: 68  SRSERQELMNTVANHFHGKLNILVNNAGIVIYK 100

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 95/270 (35%), Gaps = 79/270 (29%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M E T K A+VTG + GIG   V  L   G  VV  + DEK  +   +  K         
Sbjct: 9   MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK--------- 59
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
               +D+++   V    +    ++G++DIL NNAGI                        
Sbjct: 60  ----IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIE----------------------- 92
Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
            +S +     E+    +  N  G+    +  IP++       ++N++S            
Sbjct: 93  QYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIAS------------ 140
Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                             V+ Y                +++AY  SK  +   TR +A  
Sbjct: 141 ------------------VQSYAA------------TKNAAAYVTSKHALLGLTRSVAID 170
Query: 241 Y-PKFCVNCVCPGFVKTDINFHAGILSVEE 269
           Y PK   N VCPG + T +   A  + V E
Sbjct: 171 YAPKIRCNAVCPGTIMTPMVIKAAKMEVGE 200

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           A+VTG ++GIG+  V +LAS G +V   +R++K   + + + ++ G   E  +    D+S
Sbjct: 12  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV---CDLS 68
Query: 69  DLASVSSLADFIKTQF-GKLDILANNAGIASVK 100
             +    L + +   F GKL+IL NNAGI   K
Sbjct: 69  SRSERQELMNTVANHFHGKLNILVNNAGIVIYK 101

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 98/254 (38%), Gaps = 73/254 (28%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA +G  V+ TA  E       + L  +G          L+
Sbjct: 13  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------MALN 66
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +++  S+ ++   I  +FG +DIL NNAGI      M               E +WS + 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRM------------KEEEWSDI- 113
Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     ++TN     +  +A++  +      R++N+ S V                
Sbjct: 114 ----------METNLTSIFRLSKAVLRGMMKKRQGRIINVGSVV---------------- 147
Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--F 244
                                 G + N G   +++A    KA +  +T+ +A+       
Sbjct: 148 ----------------------GTMGNAGQANYAAA----KAGVIGFTKSMAREVASRGV 181
Query: 245 CVNCVCPGFVKTDI 258
            VN V PGF++TD+
Sbjct: 182 TVNTVAPGFIETDM 195

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTG++ GIG    R L  +G+ VV  AR      E   + K++G  P  L+ ++ D
Sbjct: 33  RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY-PGTLIPYRCD 91
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIA 97
           +S+   + S+   I++Q   +DI  NNAG+A
Sbjct: 92  LSNEEDILSMFSAIRSQHSGVDICINNAGLA 122

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS--GVDPELLLFHQ 64
          K AVVTGS  GIG      LA++G  +VL    +   +E V    A+  GV    +L+  
Sbjct: 5  KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK---VLYDG 61
Query: 65 LDISDLASVSSLADFIKTQFGKLDILANNAGI 96
           D+S   +V  L D    Q G++DIL NNAGI
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI 93

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS--GVDPELLLFHQ 64
          K AVVTGS  GIG      LA++G  +VL    +   +E V    A+  GV    +L+  
Sbjct: 5  KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK---VLYDG 61
Query: 65 LDISDLASVSSLADFIKTQFGKLDILANNAGI 96
           D+S   +V  L D    Q G++DIL NNAGI
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI 93

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/286 (20%), Positives = 101/286 (35%), Gaps = 75/286 (26%)
Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
            + A+VTG  + IG   V  LA  G  V++   DE    +AVE L+  G D   ++   +
Sbjct: 13  NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVV---M 69
Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D+++  SV +    +  Q G++DIL   AGI   +   +   D             W K 
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDG-----------QWLK- 117
Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      +  N  G  ++C+A+  ++       +V + S    + + P++      
Sbjct: 118 ----------QVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQ------ 161
Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC 245
                                              +AY  SKA ++ Y R LA  +    
Sbjct: 162 ----------------------------------QAAYNASKAGVHQYIRSLAAEWAPHG 187
Query: 246 V--NCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
           +  N V P +++T +           G E P        G P GR 
Sbjct: 188 IRANAVAPTYIETTLTRF--------GMEKPELYDAWIAGTPMGRV 225

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS--GVDPELLLFHQ 64
          K AVVTGS  GIG      LA++G  +VL    +   +E V    A+  GV    +L+  
Sbjct: 5  KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK---VLYDG 61
Query: 65 LDISDLASVSSLADFIKTQFGKLDILANNAGI 96
           D+S   +V  L D    Q G++DIL NNAGI
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI 93

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 3   EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           E  K   ++TG+++GIG  T R L +KG  V L ARDEKR       L+A   + E  L 
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKR-------LQALAAELEGALP 54
Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVK 100
              D+ +    +     ++  FG+L  L NNAG+  +K
Sbjct: 55  LPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMK 92

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+ +GIG E  + LA     V+  +R +K     V+++K+ G +      +  D
Sbjct: 45  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESS---GYAGD 101
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +S    +S + + I T+   +DIL NNAGI           D+ +   K D   +W  V 
Sbjct: 102 VSKKEEISEVINKILTEHKNVDILVNNAGITR---------DNLFLRMKND---EWEDVL 149
Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     L + +Y T+   + +I     +   R++N+SS V                
Sbjct: 150 RTN-------LNSLFYITQPISKRMIN----NRYGRIINISSIV---------------- 182
Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KF 244
                                 G   N G   +SS    SKA +  +T+ LAK       
Sbjct: 183 ----------------------GLTGNVGQANYSS----SKAGVIGFTKSLAKELASRNI 216
Query: 245 CVNCVCPGFVKTDI 258
            VN + PGF+ +D+
Sbjct: 217 TVNAIAPGFISSDM 230

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 97/254 (38%), Gaps = 73/254 (28%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA +G  V+ TA  E       + L  +G          L+
Sbjct: 13  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------MALN 66
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +++  S+ ++   I  +FG +DIL NNAGI      M               E +WS   
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRM------------KEEEWS--- 111
Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                   + ++TN     +  +A++  +      R++N+ S V                
Sbjct: 112 --------DIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVV---------------- 147
Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--F 244
                                 G + N G    ++A    KA +  +T+ +A+       
Sbjct: 148 ----------------------GTMGNAGQANFAAA----KAGVIGFTKSMAREVASRGV 181
Query: 245 CVNCVCPGFVKTDI 258
            VN V PGF++TD+
Sbjct: 182 TVNTVAPGFIETDM 195

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG+  GIG E     A+ G +VV++  +       V++++  G         + D
Sbjct: 12  KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQA---FACRCD 68
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK-FDM 103
           I+    +S+LADF  ++ GK+DIL NNAG    K FDM
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDM 106

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A VTG + GIG    R LA++GI V   ARD K    AV+ L+A+G D +       D
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVD---GSSCD 81
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAG 95
           ++    V +       +FG + IL N+AG
Sbjct: 82  VTSTDEVHAAVAAAVERFGPIGILVNSAG 110

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K A+VTG  +GIG     +LA+ G  I V    + E++  E ++ ++A+    +  +F  
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA---DQKAVFVG 59
Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVK 100
           LD++D A+  S  D    + G  D+L NNAGIA +K
Sbjct: 60  LDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIK 95

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A++TG   GIG     +   +G  V++T R    G +A + +      P+ + F Q D
Sbjct: 7  KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT----PDQIQFFQHD 62
Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGIA 97
           SD    + L D  +  FG +  L NNAGIA
Sbjct: 63 SSDEDGWTKLFDATEKAFGPVSTLVNNAGIA 93

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+ +GIG      L  KG  V L   + + G++    L     +P+  LF Q D
Sbjct: 8   KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ-FEPQKTLFIQCD 66
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK 100
           ++D   +      +   FG+LDIL NNAG+ + K
Sbjct: 67  VADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEK 100

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 102/264 (38%), Gaps = 83/264 (31%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASG-----VDPELL 60
           K A+VTG+++GIG    ++LA+ G  V +   + K    E V +++++G     +   L 
Sbjct: 8   KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLE 67
Query: 61  LFHQLDISDLASVSSLADFIKTQFG--KLDILANNAGIASVKFDMDAFADSGYQITKGDA 118
             H ++    A  SSL + ++ + G  K DIL NNAGI    F                 
Sbjct: 68  SLHGVE----ALYSSLDNELQNRTGSTKFDILINNAGIGPGAF----------------- 106
Query: 119 EVDWSKVCYQTYELAVEC-LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
                +   Q ++  V    K  ++  +Q       L  L D+ R++N+SS  +      
Sbjct: 107 ---IEETTEQFFDRXVSVNAKAPFFIIQQ------ALSRLRDNSRIINISSAAT------ 151
Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
                           RI +                    P   AY  +K  IN  T  L
Sbjct: 152 ----------------RISL--------------------PDFIAYSXTKGAINTXTFTL 175
Query: 238 AKRYPK--FCVNCVCPGFVKTDIN 259
           AK+       VN + PGFVKTD N
Sbjct: 176 AKQLGARGITVNAILPGFVKTDXN 199

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 100/264 (37%), Gaps = 78/264 (29%)
Query: 6   KKYAVVTGSNKGIGFETVRQL--ASKG-ITVVLTARDEKRGLEAVEKLKASGVDPEL--- 59
           KK  ++TG++ GIG  T  +   AS G + ++L AR     LE +E+LK + +D E    
Sbjct: 33  KKTVLITGASAGIGKATALEYLEASNGDMKLILAARR----LEKLEELKKT-IDQEFPNA 87
Query: 60  -LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA 118
            +   QLDI+    +    + +  +F  +DIL NNAG A         +D   QI   D 
Sbjct: 88  KVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKA-------LGSDRVGQIATEDI 140
Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
           +               +   TN        +A++P+ +  +S  +VNL            
Sbjct: 141 Q---------------DVFDTNVTALINITQAVLPIFQAKNSGDIVNL------------ 173
Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
                                         G IA R   P  S Y  SK  + A+T  L 
Sbjct: 174 ------------------------------GSIAGRDAYPTGSIYCASKFAVGAFTDSLR 203
Query: 239 KRY--PKFCVNCVCPGFVKTDINF 260
           K     K  V  + PG V+T+ + 
Sbjct: 204 KELINTKIRVILIAPGLVETEFSL 227

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 97/254 (38%), Gaps = 73/254 (28%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA +G  V+ TA  E       + L  +G          L+
Sbjct: 13  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------MALN 66
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +++  S+ ++   I  +FG +DIL NNA I      M               E +WS   
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRM------------KEEEWS--- 111
Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                   + ++TN     +  +A++  +      R++N+ S V                
Sbjct: 112 --------DIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVV---------------- 147
Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--F 244
                                 G + N G   +++A    KA +  +T+ +A+       
Sbjct: 148 ----------------------GTMGNAGQANYAAA----KAGVIGFTKSMAREVASRGV 181
Query: 245 CVNCVCPGFVKTDI 258
            VN V PGF++TD+
Sbjct: 182 TVNTVAPGFIETDM 195

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/258 (22%), Positives = 99/258 (38%), Gaps = 76/258 (29%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTGS++G+G      LA  G  +++   D  R  + V++ +  G D E + F   D
Sbjct: 27  RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAF---D 83
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV---DWS 123
           ++  + +      +  Q   +DIL NNAGI               Q  K   E+   DW 
Sbjct: 84  VTSESEIIEAFARLDEQGIDVDILVNNAGI---------------QFRKPMIELETADWQ 128
Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV 183
           +V           L + +   ++  + +IP        ++VN+ S  S      E ARA 
Sbjct: 129 RVIDTN-------LTSAFMIGREAAKRMIP----RGYGKIVNIGSLTS------ELARAT 171
Query: 184 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK 243
           +                                    + Y V+K  I   TR +A  + +
Sbjct: 172 V------------------------------------APYTVAKGGIKMLTRAMAAEWAQ 195
Query: 244 FCV--NCVCPGFVKTDIN 259
           + +  N + PG++ TD+N
Sbjct: 196 YGIQANAIGPGYMLTDMN 213

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
          K A+VTGS++G+G     +LA  G  +V+  AR +K  LE  E+++  GV    +L  + 
Sbjct: 5  KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK---VLVVKA 61
Query: 66 DISDLASVSSLADFIKTQFGKLDILANNA 94
          ++   A +  +   I   FG+LD+  NNA
Sbjct: 62 NVGQPAKIKEMFQQIDETFGRLDVFVNNA 90

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A++TG   GIG     +   +G  V++T R    G +A + +      P+ + F Q D
Sbjct: 7  KVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGT----PDQIQFFQHD 62
Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGIA 97
           SD    + L D  +  FG +  L NNAGIA
Sbjct: 63 SSDEDGWTKLFDATEKAFGPVSTLVNNAGIA 93

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 97/254 (38%), Gaps = 73/254 (28%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA +G  V+ TA  E       + L  +G          L+
Sbjct: 13  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------MALN 66
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +++  S+ ++   I  +FG +DIL NNA I      M               E +WS + 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNADITRDNLLMRM------------KEEEWSDI- 113
Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     ++TN     +  +A++  +      R++N+ S V                
Sbjct: 114 ----------METNLTSIFRLSKAVLRGMMKKRQGRIINVGSVV---------------- 147
Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--F 244
                                 G + N G   +++A    KA +  +T+ +A+       
Sbjct: 148 ----------------------GTMGNAGQANYAAA----KAGVIGFTKSMAREVASRGV 181
Query: 245 CVNCVCPGFVKTDI 258
            VN V PGF++TD+
Sbjct: 182 TVNTVAPGFIETDM 195

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 98/261 (37%), Gaps = 74/261 (28%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTG ++GIG    + L   G  V + ARD +   +   +L A G D + +     D
Sbjct: 30  RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAI---PAD 85
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +S  A    LA  +     +LDIL NNAG  S    ++++  SG           W KV 
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAGT-SWGAALESYPVSG-----------WEKVM 133
Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDS----PRLVNLSSYVSALKDLPEKARA 182
                    C++            L+PLL  S S     R++N+ S V+ +  + E+A  
Sbjct: 134 QLNVTSVFSCIQQ-----------LLPLLRRSASAENPARVINIGS-VAGISAMGEQAY- 180
Query: 183 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY- 241
                                                  AY  SKA ++  +R+LAK   
Sbjct: 181 ---------------------------------------AYGPSKAALHQLSRMLAKELV 201
Query: 242 -PKFCVNCVCPGFVKTDINFH 261
                VN + PG   + +  H
Sbjct: 202 GEHINVNVIAPGRFPSRMTRH 222

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 97/254 (38%), Gaps = 73/254 (28%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA +G  V+ TA  E       + L  +G          L+
Sbjct: 13  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------MALN 66
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +++  S+ ++   I  +FG +DIL NNAGI      M               E +WS + 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRM------------KEEEWSDI- 113
Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     ++TN     +  +A++  +      R++N+ S V                
Sbjct: 114 ----------METNLTSIFRLSKAVLRGMMKKRQGRIINVGSVV---------------- 147
Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--F 244
                                 G + N G   +++A    KA +  +T+ +A+       
Sbjct: 148 ----------------------GTMGNAGQANYAAA----KAGVIGFTKSMAREVASRGV 181
Query: 245 CVNCVCPGFVKTDI 258
            VN V PG ++TD+
Sbjct: 182 TVNTVAPGAIETDM 195

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD-PELLLFHQL 65
          ++A++T   KG+G +   +L +KG +V +T   +     A+E +K +  D  E L F Q 
Sbjct: 8  RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTT---AMETMKETYKDVEERLQFVQA 64
Query: 66 DISDLASVSSLADFIKTQFGKLDILANNAG 95
          D++    +  + +   + FGK+D L NNAG
Sbjct: 65 DVTKKEDLHKIVEEAMSHFGKIDFLINNAG 94

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK---RGLEAVEKLKASGVDPELLLFH 63
           K A+VTG++ GIGF      A  G T+V    +++   RG+ A    KA+G++      +
Sbjct: 35  KIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAA---YKAAGINAH---GY 88
Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGI 96
             D++D   + ++   I+++ G +DIL NNAGI
Sbjct: 89  VCDVTDEDGIQAMVAQIESEVGIIDILVNNAGI 121

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 27/180 (15%)
Query: 3   EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +  +  A+VTG  +GIG    R LA+ G  + +T   +  G+  V   + SG+   ++ F
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIA-ELSGLGARVI-F 83
Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDW 122
            + D++DL+S  +  D +  +FG++D L NNAGIAS+  D                  D+
Sbjct: 84  LRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRD------------------DF 125
Query: 123 SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---SPRLVNLSSYVSALKDLPEK 179
             +  + ++  V     N  GT    +A++     SD   S  ++N++S VSA+   PE+
Sbjct: 126 LDLKPENFDTIV---GVNLRGTVFFTQAVLKAXLASDARASRSIINITS-VSAVXTSPER 181

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 97/260 (37%), Gaps = 77/260 (29%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK--ASGVDPE 58
           M + T + A+VTG+  GIG    R   ++G  V L    E       +KLK  A+ +  +
Sbjct: 22  MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTRE-------DKLKEIAADLGKD 74
Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA 118
           + +F   ++SD  S+  LA+  + +   +DIL NNAGI             G  +   D 
Sbjct: 75  VFVFSA-NLSDRKSIKQLAEVAEREMEGIDILVNNAGITR----------DGLFVRMQDQ 123
Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
             DW  V           L  N          LI  +      R++N++S V        
Sbjct: 124 --DWDDV-----------LAVNLTAASTLTRELIHSMMRRRYGRIINITSIV-------- 162
Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
               V+G+                               P  + Y  +KA +  +++ LA
Sbjct: 163 ---GVVGN-------------------------------PGQTNYCAAKAGLIGFSKALA 188
Query: 239 KRYP--KFCVNCVCPGFVKT 256
           +        VNC+ PGF+K+
Sbjct: 189 QEIASRNITVNCIAPGFIKS 208

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 97/255 (38%), Gaps = 69/255 (27%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VT S  GIGF   R+LA  G  VV+++R ++   +AV  L+  G+     + H   
Sbjct: 16  KVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGK 75
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
             D   +  +A  +K   G +DIL +NA +       + F  S   +T+   EV W K  
Sbjct: 76  AEDRERL--VATAVKLH-GGIDILVSNAAV-------NPFFGSIMDVTE---EV-WDKT- 120
Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     L  N        +A++P +E      +V +SS                  
Sbjct: 121 ----------LDINVKAPALMTKAVVPEMEKRGGGSVVIVSS------------------ 152
Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA-KRYPK-F 244
                                   IA     P  S Y VSK  +   T+ LA +  P+  
Sbjct: 153 ------------------------IAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNI 188
Query: 245 CVNCVCPGFVKTDIN 259
            VNC+ PG +KT  +
Sbjct: 189 RVNCLAPGLIKTSFS 203

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + AVVTG   GIG  T  + A +G  +VL+  D+    +AV  L+  G D   ++    D
Sbjct: 32  RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVV---CD 88
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGI 96
           +  L  +  LAD      G +D++ +NAGI
Sbjct: 89  VRHLDEMVRLADEAFRLLGGVDVVFSNAGI 118

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 110/306 (35%), Gaps = 93/306 (30%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-----------ARDEKRGL-EAVE 48
           M     K A +TG+ +G G     +LA  G  +V             A+     L E V 
Sbjct: 41  MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVR 100
Query: 49  KLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFAD 108
            ++  G     ++  Q D+ DLAS+ ++ D    +FG +DIL +N GI          ++
Sbjct: 101 LVEEQG---RRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGI----------SN 147
Query: 109 SGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLS 167
            G  ++  D +  WS +           L+TN  G    C A++P ++E      ++ +S
Sbjct: 148 QGEVVSLTDQQ--WSDI-----------LQTNLIGAWHACRAVLPSMIERGQGGSVIFVS 194
Query: 168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSK 227
           S V                                           RG  P  S Y  SK
Sbjct: 195 STVGL-----------------------------------------RG-APGQSHYAASK 212
Query: 228 AVINAYTRILAKRYPKFC--VNCVCPGFVKTDINFHAGILSV----------EEGAESPV 275
             +      LA    +    VN V PG V T++  +  +L +          E+ AE   
Sbjct: 213 HGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFS 272
Query: 276 KLALLP 281
           +L LLP
Sbjct: 273 QLTLLP 278

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 11  VTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL 70
           +TG+  G G    R+ A  G ++VLT R E+R      +L A       +L   LD+ D 
Sbjct: 26  ITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK----TRVLPLTLDVRDR 81
Query: 71  ASVSSLADFIKTQFGKLDILANNAGIA 97
           A+ S+  D +  +F  L  L NNAG+A
Sbjct: 82  AAXSAAVDNLPEEFATLRGLINNAGLA 108

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTGS  GIG      L ++G  V++  R E+   E +++++A   D  L    Q  
Sbjct: 11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAIL----QPV 66
Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGI 96
          ++DL +     D I+ ++ K+DIL NN GI
Sbjct: 67 VADLGTEQGCQDVIE-KYPKVDILINNLGI 95

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 94/257 (36%), Gaps = 69/257 (26%)
Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           T + A+VTG+++GIG     +LA+ G  V +          A E + A           +
Sbjct: 27  TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAG--AADEVVAAIAAAGGEAFAVK 84
Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            D+S  + V +L   +  ++G+LD+L NNAGI           D+     K D   DW  
Sbjct: 85  ADVSQESEVEALFAAVIERWGRLDVLVNNAGITR---------DTLLLRMKRD---DWQS 132
Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           V           L  N  G      A   ++    S R++N++S V              
Sbjct: 133 V-----------LDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVV-------------- 167
Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK- 243
                                   GE+ N    P  + Y  +KA +   T+ +AK     
Sbjct: 168 ------------------------GEMGN----PGQANYSAAKAGVIGLTKTVAKELASR 199
Query: 244 -FCVNCVCPGFVKTDIN 259
              VN V PGF+ TD+ 
Sbjct: 200 GITVNAVAPGFIATDMT 216

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          ++  AVVTG + GIG  TV  L   G  V   ARD +R L A E           L    
Sbjct: 7  SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGER-LRAAESALRQRFPGARLFASV 65
Query: 65 LDISDLASVSSLADFIKTQFGKLDILANNAG 95
           D+ D   V + A+  +   G   IL NNAG
Sbjct: 66 CDVLDALQVRAFAEACERTLGCASILVNNAG 96

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 99/259 (38%), Gaps = 75/259 (28%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD-PEL 59
           M + T + A+VTG+  G+G    R L ++G  V L    E       EKLK    +  E 
Sbjct: 5   MFDLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTRE-------EKLKELAAELGER 57
Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAE 119
           +     ++SD  +V +L    + + G +DIL NNAGI             G  +   D  
Sbjct: 58  IFVFPANLSDREAVKALGQKAEEEMGGVDILVNNAGITR----------DGLFVRMSDE- 106
Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK 179
            DW  V   T  L      T+ +    T E   P++   +  R++N++S V         
Sbjct: 107 -DWDAVL--TVNL------TSVF--NLTRELTHPMMRRRNG-RIINITSIV--------- 145
Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
              V G+                               P  + Y  SKA +  +++ LA+
Sbjct: 146 --GVTGN-------------------------------PGQANYCASKAGLIGFSKSLAQ 172
Query: 240 RYP--KFCVNCVCPGFVKT 256
                   VNC+ PGF+++
Sbjct: 173 EIASRNVTVNCIAPGFIES 191

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 99/259 (38%), Gaps = 75/259 (28%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD-PEL 59
           M + T + A+VTG+  G+G    R L ++G  V L    E       EKLK    +  E 
Sbjct: 2   MFDLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTRE-------EKLKELAAELGER 54
Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAE 119
           +     ++SD  +V +L    + + G +DIL NNAGI             G  +   D  
Sbjct: 55  IFVFPANLSDREAVKALGQKAEEEMGGVDILVNNAGITR----------DGLFVRMSDE- 103
Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK 179
            DW  V   T  L      T+ +    T E   P++   +  R++N++S V         
Sbjct: 104 -DWDAVL--TVNL------TSVF--NLTRELTHPMMRRRNG-RIINITSIV--------- 142
Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
              V G+                               P  + Y  SKA +  +++ LA+
Sbjct: 143 --GVTGN-------------------------------PGQANYCASKAGLIGFSKSLAQ 169
Query: 240 RYP--KFCVNCVCPGFVKT 256
                   VNC+ PGF+++
Sbjct: 170 EIASRNVTVNCIAPGFIES 188

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/258 (20%), Positives = 99/258 (38%), Gaps = 73/258 (28%)
Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFH 63
           +++ A VTG   GIG    ++L   G  VV     +  R ++ +E  KA G D       
Sbjct: 12  SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFD---FYAS 68
Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWS 123
           + ++ D  S     D +K + G++D+L NNAGI                      +V + 
Sbjct: 69  EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITR--------------------DVVFR 108
Query: 124 KVCYQTYELAVECLKTNYYG-TKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA 182
           K+  + ++  ++   T+ +  TKQ  + ++         R++N+SS              
Sbjct: 109 KMTREDWQAVIDTNLTSLFNVTKQVIDGMVE----RGWGRIINISSV------------- 151
Query: 183 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP 242
                                 + ++G+          + Y  +KA I+ +T  LA+   
Sbjct: 152 ----------------------NGQKGQFGQ-------TNYSTAKAGIHGFTMSLAQEVA 182
Query: 243 K--FCVNCVCPGFVKTDI 258
                VN V PG++ TD+
Sbjct: 183 TKGVTVNTVSPGYIGTDM 200

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          T K A+VTGS +G+GF     LA+ G  V+L         E+V+ L   G D   + F  
Sbjct: 8  TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF-- 65
Query: 65 LDISDLASVSSLADFIKTQFGKLDILANNAGI 96
           D++D  ++ +    +  +   +DIL NNAGI
Sbjct: 66 -DVTDELAIEAAFSKLDAEGIHVDILINNAGI 96

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 69/177 (38%), Gaps = 25/177 (14%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M + + +  +VTG  KGIG       A  G  V + AR  +       +L   G     +
Sbjct: 36  MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGN--V 93
Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
           +  +LD+SD  S +  A  +   FG LD++  NAGI         F +            
Sbjct: 94  IGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGI---------FPE------------ 132
Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
             +++   T E   E L  N  GT  T +A +  L  S   R++  SS    +   P
Sbjct: 133 --ARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYP 187

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A+VTGS +GIG      L   G  VV+  A   K   + V ++KA G D   +   + 
Sbjct: 19  KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAI---KA 75
Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIAS 98
           DI  +  +  L D     FG LDI  +N+G+ S
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS 108

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A+VTGS +GIG      L   G  VV+  A   K   + V ++KA G D   +   + 
Sbjct: 19  KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAI---KA 75
Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIAS 98
           DI  +  +  L D     FG LDI  +N+G+ S
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS 108

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTG   G+G E V+ L  +G  V  +  +E  G +   +L       E  +F + D
Sbjct: 7  KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG------ERSMFVRHD 60
Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGI 96
          +S  A  + +   ++ + G L++L NNAGI
Sbjct: 61 VSSEADWTLVMAAVQRRLGTLNVLVNNAGI 90

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A+VTG+ +GIG E   +L  +G  V++  A   +   E V  +K +G D   +  +  
Sbjct: 30  KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG 89
Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIAS 98
            + D+  V    + +K  FGKLDI+ +N+G+ S
Sbjct: 90  VVEDI--VRMFEEAVKI-FGKLDIVCSNSGVVS 119

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A+VTG+ +GIG E   +L  +G  V++  A   +   E V  +K +G D   +  +  
Sbjct: 30  KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG 89
Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIAS 98
            + D+  V    + +K  FGKLDI+ +N+G+ S
Sbjct: 90  VVEDI--VRMFEEAVKI-FGKLDIVCSNSGVVS 119

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
            K  +VTGS  GIG      LA +G  VV+ A       EAV K   +  D    +   +
Sbjct: 9   NKVGIVTGSGGGIGQAYAEALAREGAAVVV-ADINAEAAEAVAKQIVA--DGGTAISVAV 65
Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGI-ASVKFD 102
           D+SD  S  ++AD    +FG +D L NNA I   +K D
Sbjct: 66  DVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLD 103

>pdb|1YO6|A Chain A, Crystal Structure Of The Putative Carbonyl Reductase Sniffer Of Caenorhabditis Elegans Length = 250

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 222 AYKVSKAVINAYTRILA---KRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLA 278
           AY++SKA IN + R LA   K      VN  CPG+V+T++      L+VE+     +   
Sbjct: 171 AYRMSKAAINMFGRTLAVDLKDDNVLVVN-FCPGWVQTNLGGKNAALTVEQSTAELISSF 229
Query: 279 LLPDGGPTGRFFLRK 293
              D    GRFF+R 
Sbjct: 230 NKLDNSHNGRFFMRN 244

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 3  EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLL 61
          E  K  A++TG+++GIG      LA+ G  VVL AR  K+ LE V +++  S    +  +
Sbjct: 4  EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIAR-SKQNLEKVHDEIXRSNKHVQEPI 62
Query: 62 FHQLDISDLASVSSLADFIKTQFGKLDILANNA 94
             LDI+D     +    I  ++G +DIL N A
Sbjct: 63 VLPLDITDCTKADTEIKDIHQKYGAVDILVNAA 95

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTG+++GIG      LA +G  V+ TA  E       + L  +G          L+
Sbjct: 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG------XALN 63
Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGI 96
          +++  S+ ++   I  +FG +DIL NNAGI
Sbjct: 64 VTNPESIEAVLKAITDEFGGVDILVNNAGI 93

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K AV+TG   GIG     + A +G  + +   D     EA   ++  G     +L  + D
Sbjct: 8   KLAVITGGANGIGRAIAERFAVEGADIAIA--DLVPAPEAEAAIRNLG---RRVLTVKCD 62
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIAS-VKFDMDAF----------ADSGYQITK 115
           +S    V +    + + FG+ DIL NNAGI   + FD   F           DSG+ + K
Sbjct: 63  VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 122
Query: 116 ----GDAEVDWSKV---CYQTYELAVECLKTNYYGTK 145
               G     W ++      TY L +E   T+Y  TK
Sbjct: 123 AFVPGMKRNGWGRIINLTSTTYWLKIEAY-THYISTK 158

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A++TG+  G G    ++ A  G  VV+  RD K G E V     +G   +  L    D
Sbjct: 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD-KAGAERV-----AGEIGDAALAVAAD 63
Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGIA 97
          IS  A V +  +   ++FGK+DIL NNAGI 
Sbjct: 64 ISKEADVDAAVEAALSKFGKVDILVNNAGIG 94

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 92/252 (36%), Gaps = 68/252 (26%)
Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           + + A+VTG +KGIG    R L   G TV +   D       V  L+  G   E      
Sbjct: 11  SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVE------ 64
Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           +D++  ASV +         G  D+L  NAG+++++  +D        IT  D E D++ 
Sbjct: 65  VDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVD--------IT--DEEWDFN- 113
Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
                                              + R V L++ ++    L    + V+
Sbjct: 114 --------------------------------FDVNARGVFLANQIACRHFLASNTKGVI 141
Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
            +  +L  +    V       Y   + A  GW               A  R +A +  + 
Sbjct: 142 VNTASLAAK----VGAPLLAHYSASKFAVFGWT-------------QALAREMAPKNIR- 183
Query: 245 CVNCVCPGFVKT 256
            VNCVCPGFVKT
Sbjct: 184 -VNCVCPGFVKT 194

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 10 VVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD 69
          +VTG+  G G    R+   +G  V+ T R ++R  E  ++L  +      L   QLD+ +
Sbjct: 4  LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDN------LYIAQLDVRN 57
Query: 70 LASVSSLADFIKTQFGKLDILANNAGIA 97
           A++  +   +  ++  +DIL NNAG+A
Sbjct: 58 RAAIEEMLASLPAEWCNIDILVNNAGLA 85

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 97/252 (38%), Gaps = 70/252 (27%)
Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           T K  V++G    +G    R+ A +G  +VL AR  +R  +  +++  +G      L   
Sbjct: 10  TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG---RRALSVG 66
Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            DI+D A V+ L D     +G++D++ NNA        M  FA++               
Sbjct: 67  TDITDDAQVAHLVDETMKAYGRVDVVINNAFRVP---SMKPFANT--------------- 108
Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
               T+E   + ++   +G  +  +   P LE S    +VN++S                
Sbjct: 109 ----TFEHMRDAIELTVFGALRLIQGFTPALEESKGA-VVNVNS---------------- 147
Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK- 243
                       MVV+     Y               AYK++K+ + A ++ LA    + 
Sbjct: 148 ------------MVVRHSQAKY--------------GAYKMAKSALLAMSQTLATELGEK 181
Query: 244 -FCVNCVCPGFV 254
              VN V PG++
Sbjct: 182 GIRVNSVLPGYI 193

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 215 GWCPHSSAYKVSKAVINAYTRILAKRY-PKFCVNCVCPGFVKTDINFH 261
           G  P + AY  SK  +  +TR LAK   PK  VN VCPG + T   FH
Sbjct: 150 GGGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMIST--TFH 195

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A +TG   GIGF         G   V+ +R   R L A  KL  +G      L   +D
Sbjct: 28  KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKL--AGATGRRCLPLSMD 85
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNA 94
           +    +V +  D    +FG++DIL N A
Sbjct: 86  VRAPPAVMAAVDQALKEFGRIDILINCA 113

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 29/169 (17%)
Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           + K  +VTG++ G G        + G TV+ TAR      EA++ L A+   P+      
Sbjct: 4   SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARR----TEALDDLVAA--YPDRAEAIS 57
Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           LD++D   +  +A  +  ++G++D+L NNAG   V                G  E    +
Sbjct: 58  LDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQV----------------GAFEETTER 101
Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSAL 173
                +EL V       +G  +   AL+P      S  +VN+SS+   L
Sbjct: 102 ELRDLFELHV-------FGPARLTRALLPQXRERGSGSVVNISSFGGQL 143

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           A++TG+  GIG  T   LA+ G+TV    R      E  +++  +G     L   + D+S
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIAL---EADVS 87
Query: 69  D-LASVSSLADFIKTQFGKLDILANNAGIASVKFDMD 104
           D L   +++ D +  +FG LDI+  NAGI  V   +D
Sbjct: 88  DELQXRNAVRDLV-LKFGHLDIVVANAGINGVWAPID 123

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 27/128 (21%)
Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVL---------------TARD-EKRGL 44
           M     K  +VTG  +G G     +LA +G  ++L               T+RD E+ GL
Sbjct: 5   MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGL 64
Query: 45  EAVEKLKASGVDPELLLFHQLDISDLASVS-SLADFIKTQFGKLDILANNAGIASV--KF 101
           E VEK        E+      D+ D A+VS  LA+ +  +FGKLD++  NAGI  +    
Sbjct: 65  E-VEKTGRKAYTAEV------DVRDRAAVSRELANAV-AEFGKLDVVVANAGICPLGAHL 116
Query: 102 DMDAFADS 109
            + AFAD+
Sbjct: 117 PVQAFADA 124

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 93/255 (36%), Gaps = 70/255 (27%)
Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQ 64
            + A+VTG++ G G     +  ++G  V   A D     LE   +        ++L   +
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRV--AALDLSAETLEETARTHWHAYADKVLRV-R 58
Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            D++D   V++       QFG +D+L NNAGI                   G++E   + 
Sbjct: 59  ADVADEGDVNAAIAATMEQFGAIDVLVNNAGI------------------TGNSE---AG 97
Query: 125 VCYQT-YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV 183
           V + T  E   + +  N  G    C A++P + L  +  +VN++S  S +          
Sbjct: 98  VLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA--------- 148
Query: 184 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK 243
                                             P  SAY  SK  +   T+ +A  Y  
Sbjct: 149 ---------------------------------FPGRSAYTTSKGAVLQLTKSVAVDYAG 175
Query: 244 FCVNC--VCPGFVKT 256
             + C  VCPG ++T
Sbjct: 176 SGIRCNAVCPGMIET 190

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 1  MAEATKKY----AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD 56
          MA A +      AV+TG   G+G  T ++L  +G T VL       G    +KL  +   
Sbjct: 1  MAAAVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGN--- 57
Query: 57 PELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIA 97
              +F   +++    V +     K +FG++D+  N AGIA
Sbjct: 58 ---CIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIA 95

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 9  AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
          AV+TG   G+G  T ++L  +G T VL       G    +KL  +       +F   +++
Sbjct: 12 AVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGN------CIFAPANVT 65
Query: 69 DLASVSSLADFIKTQFGKLDILANNAGIA 97
              V +     K +FG++D+  N AGIA
Sbjct: 66 SEKEVQAALTLAKEKFGRIDVAVNCAGIA 94

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 1  MAEATKKY----AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD 56
          MA A +      AV+TG   G+G  T ++L  +G T VL       G    +KL  +   
Sbjct: 1  MAAAVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGN--- 57
Query: 57 PELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIA 97
              +F   +++    V +     K +FG++D+  N AGIA
Sbjct: 58 ---CIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIA 95

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 87/255 (34%), Gaps = 81/255 (31%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG N+GIG    R  A  G  V +T R              SG  PE  L  + D
Sbjct: 22  RSVLVTGGNRGIGLAIARAFADAGDKVAITYR--------------SGEPPEGFLAVKCD 67
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           I+D   V      I+   G +++L  NAG+   +  M              +E D++ V 
Sbjct: 68  ITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRM------------SEEDFTSV- 114
Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     ++TN  GT +  +     +  +   R+V +SS V  L    +        
Sbjct: 115 ----------VETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQ-------- 156
Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--KF 244
                                    AN         Y  SKA +  + R LA+       
Sbjct: 157 -------------------------AN---------YAASKAGLVGFARSLARELGSRNI 182
Query: 245 CVNCVCPGFVKTDIN 259
             N V PGFV TD+ 
Sbjct: 183 TFNVVAPGFVDTDMT 197

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 94/254 (37%), Gaps = 71/254 (27%)
Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFHQ 64
           K+ A VTG   G+G    R+L   G+ V ++  +    +   +   + +G D +    + 
Sbjct: 25  KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKA---YA 81
Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           +D++D  S    A+ +   FGK+D+L NNAGI       DA   +  ++TKG    DW  
Sbjct: 82  VDVADFESCERCAEKVLADFGKVDVLINNAGITR-----DA---TFMKMTKG----DWDA 129
Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           V           L   +  TKQ    ++         R+VN+ S           +R   
Sbjct: 130 VMRTD-------LDAMFNVTKQFIAGMVE----RRFGRIVNIGSV--------NGSRGAF 170
Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK- 243
           G                                     Y  +KA I+ +T+ LA    K 
Sbjct: 171 GQAN----------------------------------YASAKAGIHGFTKTLALETAKR 196
Query: 244 -FCVNCVCPGFVKT 256
              VN V PG++ T
Sbjct: 197 GITVNTVSPGYLAT 210

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 39/194 (20%)
Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           KK  V+TG++ GIG    R+ + +G  ++L AR        VE+LKA  + P  L   Q+
Sbjct: 16  KKLVVITGASSGIGEAIARRFSEEGHPLLLLARR-------VERLKALNL-PNTLC-AQV 66
Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D++D  +  +     +  +G  D + NNAG+  +            QI   +A  +W ++
Sbjct: 67  DVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLG-----------QIDTQEAN-EWQRM 114
Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR---- 181
                         N  G     +A++  ++  +   ++N+SS ++  K  P+ A     
Sbjct: 115 -----------FDVNVLGLLNGMQAVLAPMKARNCGTIINISS-IAGKKTFPDHAAYCGT 162
Query: 182 --AVLGDVENLTEE 193
             AV    EN+ EE
Sbjct: 163 KFAVHAISENVREE 176

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 95/255 (37%), Gaps = 68/255 (26%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A++TG+++GIG     +LA  G  + +     +   E V +       P L+     +
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSP-LVAVLGAN 60
Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           + +  + ++L        G LD L NNAGI           D+     K +   DW  V 
Sbjct: 61  LLEAEAATALVHQAAEVLGGLDTLVNNAGITR---------DTLLVRMKDE---DWEAV- 107
Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     L+ N     +T    + L+  +   R+VN++S V            +LG+
Sbjct: 108 ----------LEANLSAVFRTTREAVKLMMKARFGRIVNITSVVG-----------ILGN 146
Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK--F 244
                                          P  + Y  SKA +  +TR +AK Y +   
Sbjct: 147 -------------------------------PGQANYVASKAGLIGFTRAVAKEYAQRGI 175
Query: 245 CVNCVCPGFVKTDIN 259
            VN V PGF++T++ 
Sbjct: 176 TVNAVAPGFIETEMT 190

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 27/189 (14%)
Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS--GVDPELLLFHQ 64
           + A+VTG   GIG   V++L   G  VV+ +R  +R   A ++L+A+        ++  Q
Sbjct: 19  QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQ 78
Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQI-TKGDAEVDWS 123
            +I +   V++L       FGK++ L NN G          F      I +KG     W 
Sbjct: 79  CNIRNEEEVNNLVKSTLDTFGKINFLVNNGG--------GQFLSPAEHISSKG-----WH 125
Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV 183
            V           L+TN  GT   C+A+           +VN+     A   L   + A 
Sbjct: 126 AV-----------LETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAA 174
Query: 184 LGDVENLTE 192
              V NLT+
Sbjct: 175 RAGVYNLTK 183

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	298
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-121
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-108
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	2e-54
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	4e-46
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-38
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	4e-38
1xkq_A	280	Short-chain reductase family member (5D234); parra	6e-38
1spx_A	278	Short-chain reductase family member (5L265); paral	7e-38
1xhl_A	297	Short-chain dehydrogenase/reductase family member	4e-36
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	3e-35
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	5e-34
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	3e-33
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	5e-33
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	6e-33
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	5e-32
1xq1_A	266	Putative tropinone reducatse; structural genomics,	6e-32
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	7e-32
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	1e-31
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-31
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-31
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-31
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	3e-31
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	3e-31
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	4e-31
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	4e-31
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	5e-31
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	5e-31
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	8e-31
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	9e-31
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	1e-30
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	1e-30
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	1e-30
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-30
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	2e-30
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	3e-30
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	3e-30
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	8e-30
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	9e-30
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-29
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-29
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-29
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-29
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-29
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	2e-29
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	2e-29
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-29
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-29
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	3e-29
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	3e-29
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	3e-29
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	3e-29
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	3e-29
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	4e-29
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	5e-29
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	5e-29
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	6e-29
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	7e-29
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	9e-29
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-28
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-28
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-28
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-28
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	2e-28
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-28
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	2e-28
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-28
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-28
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-28
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-28
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	2e-28
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	3e-28
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	4e-28
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	5e-28
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	6e-28
4dqx_A	277	Probable oxidoreductase protein; structural genomi	6e-28
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-28
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	8e-28
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	8e-28
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	1e-27
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	1e-27
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-27
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-27
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-27
3rih_A	293	Short chain dehydrogenase or reductase; structural	2e-27
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-27
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-27
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	3e-27
3imf_A	257	Short chain dehydrogenase; structural genomics, in	4e-27
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	4e-27
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	5e-27
4e4y_A	244	Short chain dehydrogenase family protein; structur	7e-27
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	8e-27
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	8e-27
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	9e-27
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-26
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-26
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-26
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	1e-26
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	3e-26
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	3e-26
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	5e-26
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	7e-26
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	7e-26
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	8e-26
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-25
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	2e-25
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	2e-25
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-25
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-25
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	3e-25
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	3e-25
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	3e-25
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	5e-25
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	9e-25
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	1e-24
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-24
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	2e-24
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-24
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-24
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	4e-24
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	7e-24
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	7e-24
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	8e-24
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	8e-24
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	1e-23
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-23
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-23
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-23
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	3e-23
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	3e-23
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-23
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	9e-23
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-22
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	1e-22
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-22
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	2e-22
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-22
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	3e-22
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	3e-22
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	4e-22
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	5e-22
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	7e-22
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	8e-22
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-21
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-21
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-21
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-21
3cxt_A	291	Dehydrogenase with different specificities; rossma	2e-21
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	2e-21
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	3e-21
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-21
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	4e-21
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	5e-21
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	5e-21
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	7e-21
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-21
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	9e-21
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	1e-20
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-20
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-20
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-20
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-20
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	3e-20
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	3e-20
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	4e-20
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	5e-20
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	1e-19
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	1e-19
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-19
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	5e-19
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	3e-18
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	4e-18
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	4e-18
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	4e-18
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	5e-17
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	1e-16
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	1e-16
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	1e-16
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	3e-16
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	2e-15
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	9e-13
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	3e-12
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-09
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-06
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	2e-09
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-09
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	1e-08
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	2e-08
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	3e-05
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	3e-05
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	4e-05
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	6e-05
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	7e-05
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	1e-04
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	1e-04
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	1e-04
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	1e-04
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	1e-04
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	1e-04
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	2e-04
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	2e-04

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  348 bits (895), Expect = e-121
 Identities = 159/303 (52%), Positives = 203/303 (66%), Gaps = 11/303 (3%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            ++ AVVTG NKGIGFE  +QL+S GI VVLT RD  +G EAVEKLK S    E ++FHQ
Sbjct: 11  KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN--HENVVFHQ 68

Query: 65  LDISD-LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFA-------DSGYQITKG 116
           LD++D +A++SSLADFIKT FGKLDIL NNAG+A    D D F        +   ++ K 
Sbjct: 69  LDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKI 128

Query: 117 DAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDL 176
             + +  ++  +TYELA ECLK NY G K   E LIPLL+LSDSPR+VN+SS   +LK +
Sbjct: 129 YEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYV 188

Query: 177 -PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTR 235
             E A  +LGD + LTEERI+MVV    KD++E  I   GW    +AY  SKA +NAYTR
Sbjct: 189 SNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR 248

Query: 236 ILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEE 295
           +LA + PKF VNCVCPG VKT++N+  G  + EEGAE  V++AL PD GP+G F+   E 
Sbjct: 249 VLANKIPKFQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVVRIALFPDDGPSGFFYDCSEL 308

Query: 296 APF 298
           + F
Sbjct: 309 SAF 311

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  314 bits (807), Expect = e-108
 Identities = 109/305 (35%), Positives = 153/305 (50%), Gaps = 40/305 (13%)

Query: 4   ATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +    A+VTG NKGIG   VR L       VVLTARD  RG  AV++L+A G+ P    F
Sbjct: 2   SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPR---F 58

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDW 122
           HQLDI DL S+ +L DF++ ++G LD+L NNAGIA    D   F                
Sbjct: 59  HQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPF---------------- 102

Query: 123 SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK-DLPEKAR 181
                  +  A   +KTN++GT+  C  L+PL  +    R+VN+SS +S           
Sbjct: 103 -------HIQAEVTMKTNFFGTRDVCTELLPL--IKPQGRVVNVSSIMSVRALKSCSPEL 153

Query: 182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 241
                 E +TEE +  ++  + +D ++G     GW   SSAY V+K  +   +RI A++ 
Sbjct: 154 QQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWP--SSAYGVTKIGVTVLSRIHARKL 211

Query: 242 PK------FCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRK 293
            +        +N  CPG+V+TD+       S EEGAE+PV LALLP    GP G+F   K
Sbjct: 212 SEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK 271

Query: 294 EEAPF 298
               +
Sbjct: 272 RVEQW 276

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  176 bits (448), Expect = 2e-54
 Identities = 61/303 (20%), Positives = 102/303 (33%), Gaps = 80/303 (26%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +    VVTG+N+GIG   V+QL        ++ TARD ++  E  + +K S V       
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-KSIKDSRVH-----V 55

Query: 63  HQLDISDLASVSSLADFIKTQFG--KLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
             L ++   S+ +    +    G   L +L NNAG+           +            
Sbjct: 56  LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLL---SYGTNTEP----------- 101

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-----------DSPRLVNLSSY 169
                      +  E L  N        + L+PLL+ +               ++ +SS 
Sbjct: 102 --------NRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSG 153

Query: 170 VSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAV 229
           + ++                                    +  +        AY++SKA 
Sbjct: 154 LGSI-----------------------------------TDNTSGSAQFPVLAYRMSKAA 178

Query: 230 INAYTRILAKRYPK--FCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTG 287
           IN + R LA         V   CPG+V+T++      L+VE+     +      D    G
Sbjct: 179 INMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNG 238

Query: 288 RFF 290
           RFF
Sbjct: 239 RFF 241

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  155 bits (394), Expect = 4e-46
 Identities = 52/302 (17%), Positives = 101/302 (33%), Gaps = 83/302 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLAS---KGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
              ++TG N+G+G   V+ L +       +  T R+ ++  + +E L  +  +   +   
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA-KELEDLAKNHSN---IHIL 77

Query: 64  QLDISDLASVSSLADFIKTQFG--KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVD 121
           ++D+ +  +   L   I+       L++L NNAGI                         
Sbjct: 78  EIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGI-------------------APKSAR 118

Query: 122 WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP-----------RLVNLSSYV 170
            + V     +  ++ L+TN        +A +PLL+ +               ++N+SS +
Sbjct: 119 ITAV---RSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL 175

Query: 171 SALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVI 230
            +++                                      N        AY+ SK+ +
Sbjct: 176 GSIQG-------------------------------------NTD--GGMYAYRTSKSAL 196

Query: 231 NAYTRILAKRYPK--FCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGR 288
           NA T+ L+            + PG+VKTD+   +  L V       V+          G 
Sbjct: 197 NAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGG 256

Query: 289 FF 290
           F 
Sbjct: 257 FV 258

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  134 bits (340), Expect = 2e-38
 Identities = 55/253 (21%), Positives = 83/253 (32%), Gaps = 65/253 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG++ GIG E     A  G TV+L  R+E++  +    +              L 
Sbjct: 13  RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLL 72

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
                +   LA  I   + +LD + +NAG+      M                  W  V 
Sbjct: 73  TCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQ-----------VWQDV- 120

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                + V  +   +  T+    AL+PLL  SD+  LV  SS V                
Sbjct: 121 -----MQV-NVNATFMLTQ----ALLPLLLKSDAGSLVFTSSSV---------------- 154

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFC 245
                                 G      W     AY  SK       ++LA  Y  +  
Sbjct: 155 ----------------------GRQGRANW----GAYAASKFATEGMMQVLADEYQQRLR 188

Query: 246 VNCVCPGFVKTDI 258
           VNC+ PG  +T +
Sbjct: 189 VNCINPGGTRTAM 201

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  134 bits (339), Expect = 4e-38
 Identities = 56/254 (22%), Positives = 92/254 (36%), Gaps = 67/254 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG+ +GIG    R  A+ G +VVL  R E    E  +++K++G    L++   L+
Sbjct: 15  RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLE 74

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
            +       LA  ++ +FG+LD L +NA I   +  ++   D            D+ +V 
Sbjct: 75  NATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDE-----------DFMQV- 122

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                + V  +   +  T+    AL+PLL+ S+   +   SS V                
Sbjct: 123 -----MHVN-VNATFMLTR----ALLPLLKRSEDASIAFTSSSV---------------- 156

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY---PK 243
                                 G      W     AY VSK       + LA        
Sbjct: 157 ----------------------GRKGRANW----GAYGVSKFATEGLMQTLADELEGVTA 190

Query: 244 FCVNCVCPGFVKTD 257
              N + PG  +T 
Sbjct: 191 VRANSINPGATRTG 204

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  134 bits (340), Expect = 6e-38
 Identities = 67/292 (22%), Positives = 105/292 (35%), Gaps = 66/292 (22%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M   + K  ++TGS+ GIG  T    A +G  V +T R  +R  E  + +  SGV  + +
Sbjct: 1   MPRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQV 60

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D++       + +    QFGK+D+L NNAG A          D G          
Sbjct: 61  NSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGID-------- 112

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
            + K            LK N     +  + + P L ++    +VN+SS V+         
Sbjct: 113 IYHKT-----------LKLNLQAVIEMTKKVKPHL-VASKGEIVNVSSIVA--------- 151

Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                                       G  A     P    Y ++KA ++ YTR  A  
Sbjct: 152 ----------------------------GPQAQ----PDFLYYAIAKAALDQYTRSTAID 179

Query: 241 YPKF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVK-LALLPDGGPTGRF 289
             KF   VN V PG V+T   F   +   ++ ++     +A   +  P G  
Sbjct: 180 LAKFGIRVNSVSPGMVETG--FTNAMGMPDQASQKFYNFMASHKECIPIGAA 229

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  134 bits (339), Expect = 7e-38
 Identities = 65/291 (22%), Positives = 97/291 (33%), Gaps = 64/291 (21%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M    +K A++TGS+ GIG  T    A +G  V +T R  +R  E  +++ A+GV  + +
Sbjct: 1   MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNV 60

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D++  A    +      +FGKLDIL NNAG A                       
Sbjct: 61  NSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQS--------IE 112

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
            +              L  N        +  +P L  S    +VN+SS  S L       
Sbjct: 113 SYDAT-----------LNLNLRSVIALTKKAVPHL-SSTKGEIVNISSIASGL------- 153

Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                                                P    Y ++KA I+ YTR  A  
Sbjct: 154 ---------------------------------HAT-PDFPYYSIAKAAIDQYTRNTAID 179

Query: 241 YPKF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             +    VN + PG V T     A  +  E   +    +A + +  P G  
Sbjct: 180 LIQHGIRVNSISPGLVATGF-GSAMGMPEETSKKFYSTMATMKECVPAGVM 229

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  130 bits (328), Expect = 4e-36
 Identities = 63/291 (21%), Positives = 99/291 (34%), Gaps = 66/291 (22%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA  + K  ++TGS+ GIG       A +G  V +T R+E R  E  +++  +GV  E +
Sbjct: 21  MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKI 80

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D+++ +    + +    +FGK+DIL NNAG              G   T    E 
Sbjct: 81  NAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGAN---------LADGTANTDQPVE- 130

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
            + K             K N+    +  +     L +     +VN+SS V+         
Sbjct: 131 LYQKT-----------FKLNFQAVIEMTQKTKEHL-IKTKGEIVNVSSIVA--------- 169

Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                                       G  A+         Y  +KA ++ YTR  A  
Sbjct: 170 ----------------------------GPQAH----SGYPYYACAKAALDQYTRCTAID 197

Query: 241 YPKF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             +    VN V PG V T     A  L      +    +    +  P G  
Sbjct: 198 LIQHGVRVNSVSPGAVATGF-MGAMGLPETASDKLYSFIGSRKECIPVGHC 247

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  127 bits (321), Expect = 3e-35
 Identities = 64/285 (22%), Positives = 99/285 (34%), Gaps = 75/285 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTG  + IG   V  LA  G  V++   DE    +AVE L+  G D   +    +D
Sbjct: 14  RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHD---VSSVVMD 70

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +++  SV +    +  Q G++DIL   AGI   +   +   D             W K  
Sbjct: 71  VTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDG-----------QWLKQ- 118

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     +  N  G  ++C+A+  ++       +V + S                  
Sbjct: 119 ----------VDINLNGMFRSCQAVGRIMLEQKQGVIVAIGS------------------ 150

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                     M           G I NR      +AY  SKA ++ Y R LA  +     
Sbjct: 151 ----------MS----------GLIVNRP--QQQAAYNASKAGVHQYIRSLAAEWAPHGI 188

Query: 245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             N V P +++T +           G E P        G P GR 
Sbjct: 189 RANAVAPTYIETTLT--------RFGMEKPELYDAWIAGTPMGRV 225

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  123 bits (312), Expect = 5e-34
 Identities = 55/289 (19%), Positives = 81/289 (28%), Gaps = 74/289 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             AVVTG + GIG  TV  L   G  V   ARD +R   A   L+        L     D
Sbjct: 9   AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGAR-LFASVCD 67

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDAEVDWSK 124
           + D   V + A+  +   G   IL NNAG   V    +                +  WS+
Sbjct: 68  VLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETT--------------DEAWSE 113

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
                       L+  ++       A +P LE      +V ++S +              
Sbjct: 114 E-----------LQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLL-------------- 148

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                            PH  A   ++A +    R +A  +   
Sbjct: 149 ------------------------ASQPE----PHMVATSAARAGVKNLVRSMAFEFAPK 180

Query: 245 --CVNCVCPGFVKTDIN--FHAGILSVEEGAESPVKLALLPDGGPTGRF 289
              VN +  G V++             E                P GR 
Sbjct: 181 GVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRL 229

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  122 bits (308), Expect = 3e-33
 Identities = 63/294 (21%), Positives = 99/294 (33%), Gaps = 74/294 (25%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M       A++TG+  GIG  T   LA+ G+TV    R      E  +++  +G      
Sbjct: 23  MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQA--- 79

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVK---FDMDAFADSGYQITKGD 117
           +  + D+SD   + +    +  +FG LDI+  NAGI  V     D+              
Sbjct: 80  IALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLK------------- 126

Query: 118 AEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
              +W +            +  N  GT  T    +P L+      +V +SS ++  +   
Sbjct: 127 -PFEWDET-----------IAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSS-INGTRT-- 171

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
                                                G     +AY  +KA   A  + L
Sbjct: 172 ---------------------------------FTTPGA----TAYTATKAAQVAIVQQL 194

Query: 238 AKRYPKF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
           A    K    VN VCPG ++T+I      L  EE    PV+          G+ 
Sbjct: 195 ALELGKHHIRVNAVCPGAIETNI-SDNTKLRHEEETAIPVEWPKGQVPITDGQP 247

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  121 bits (306), Expect = 5e-33
 Identities = 64/286 (22%), Positives = 97/286 (33%), Gaps = 75/286 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A+VTG +KGIG+  V +LA  G  V   +R+EK   E +E  +  G++   +     D
Sbjct: 22  TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN---VEGSVCD 78

Query: 67  ISDLASVSSLADFIKTQF-GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           +        L   +   F GKL+IL NNAG+   K   D                D++ +
Sbjct: 79  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEK------------DYNII 126

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      + TN+       +   PLL+ S +  ++ LSS                 
Sbjct: 127 -----------MGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIA--------------- 160

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                  G  A        S Y  SK  IN  T+ LA  + K  
Sbjct: 161 -----------------------GFSALPS----VSLYSASKGAINQMTKSLACEWAKDN 193

Query: 245 -CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             VN V PG + T +      +      +  +   +     P GR 
Sbjct: 194 IRVNSVAPGVILTPLV--ETAIKKNPHQKEEIDNFI--VKTPMGRA 235

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  121 bits (306), Expect = 6e-33
 Identities = 45/285 (15%), Positives = 86/285 (30%), Gaps = 74/285 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG   GIG      L + G +V++  R+  +   AV++L+A G +   + +   D
Sbjct: 12  RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTD 71

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           I++    +   D +    G+L  + + AG +     +                  W +  
Sbjct: 72  ITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSE-----------AWRRT- 119

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                + +  +    Y  K         +        V +SS                  
Sbjct: 120 -----VDL-NVNGTMYVLK----HAAREMVRGGGGSFVGISSIA---------------- 153

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC- 245
                                     +R       AY V+K+ ++   ++ A        
Sbjct: 154 ----------------------ASNTHRW----FGAYGVTKSAVDHLMQLAADELGASWV 187

Query: 246 -VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
            VN + PG ++TD+        V    ES    +      P  R 
Sbjct: 188 RVNSIRPGLIRTDL--------VAAITESAELSSDYAMCTPLPRQ 224

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  118 bits (298), Expect = 5e-32
 Identities = 56/289 (19%), Positives = 96/289 (33%), Gaps = 75/289 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K AV+TGS+ GIG       A +G  +VL AR   R  EA   LK        +L   +D
Sbjct: 8   KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF--GVRVLEVAVD 65

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDAEVDWSK 124
           ++    V ++ + +++ FG  DIL NNAG  S +   +                +  W  
Sbjct: 66  VATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAA--------------DEKWQF 111

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
                        +       +    L+P +       +++ +S + A++ L  +     
Sbjct: 112 Y-----------WELLVMAAVRLARGLVPGMRARGGGAIIHNAS-ICAVQPLWYEP---- 155

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                                 Y V+KA +  +++ LA    K 
Sbjct: 156 -------------------------------------IYNVTKAALMMFSKTLATEVIKD 178

Query: 245 --CVNCVCPGFVKTDI--NFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
              VNC+ PG + T         +     G       ++  +  P  RF
Sbjct: 179 NIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRF 227

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  118 bits (298), Expect = 6e-32
 Identities = 55/256 (21%), Positives = 80/256 (31%), Gaps = 71/256 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG  KGIG   V + A  G  +   AR+E    E + K +  G     +     D
Sbjct: 15  KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ---VTGSVCD 71

Query: 67  ISDLASVSSLADFIKTQFG-KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
            S       L   + + FG KLDIL NN G    K  +D  A+            D+S  
Sbjct: 72  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAE------------DFSFH 119

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      + TN        +   PLL+ S    ++ +SS                 
Sbjct: 120 -----------ISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIA--------------- 153

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                  G ++        S Y  +K  +N   R LA  +    
Sbjct: 154 -----------------------GVVSASV----GSIYSATKGALNQLARNLACEWASDG 186

Query: 245 -CVNCVCPGFVKTDIN 259
              N V P  + T + 
Sbjct: 187 IRANAVAPAVIATPLA 202

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  117 bits (297), Expect = 7e-32
 Identities = 53/255 (20%), Positives = 91/255 (35%), Gaps = 73/255 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG+  GIG E     A+ G +VV++  +       V++++  G         + D
Sbjct: 12  KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ---AFACRCD 68

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK-FDMDAFADSGYQITKGDAEVDWSKV 125
           I+    +S+LADF  ++ GK+DIL NNAG    K FDM                 D+ + 
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMP--------------MADFRRA 114

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                       + N +      + + P +E +    ++ ++S                 
Sbjct: 115 -----------YELNVFSFFHLSQLVAPEMEKNGGGVILTITSMA--------------- 148

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                   E  N       ++Y  SKA  +   R +A    +  
Sbjct: 149 -----------------------AENKNIN----MTSYASSKAAASHLVRNMAFDLGEKN 181

Query: 245 -CVNCVCPGFVKTDI 258
             VN + PG + TD 
Sbjct: 182 IRVNGIAPGAILTDA 196

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  117 bits (296), Expect = 1e-31
 Identities = 63/293 (21%), Positives = 96/293 (32%), Gaps = 83/293 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL--KASGVDPE 58
           M     K A+V G   G+G  TVR+L   G  V+LT R+E       E+   +   +   
Sbjct: 3   MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHAL--- 59

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA 118
                + DI+DL  ++ L        G +D+L  NAG++ ++            ++    
Sbjct: 60  -----RSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQ--------VS---- 102

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
           E  + +               N  G   T + L PL  + +   +V  SS          
Sbjct: 103 EASYDRQ-----------FAVNTKGAFFTVQRLTPL--IREGGSIVFTSSVA-------- 141

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
                                          E  +    P  S Y  SKA + ++  +LA
Sbjct: 142 ------------------------------DEGGH----PGMSVYSASKAALVSFASVLA 167

Query: 239 KRYP--KFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
                    VN V PGF+ T     AGI      AE      L  +  P  R 
Sbjct: 168 AELLPRGIRVNSVSPGFIDTPTKGVAGI----TEAERAEFKTLGDNITPMKRN 216

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  117 bits (296), Expect = 1e-31
 Identities = 51/256 (19%), Positives = 78/256 (30%), Gaps = 75/256 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VT S  GIG    R+LA  G  VV+++R ++     V  L+  G+    +      
Sbjct: 15  KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLS---VTGTVCH 71

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK---FDMDAFADSGYQITKGDAEVDWS 123
           +        L        G +DIL +NA +        D                E  W 
Sbjct: 72  VGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDAT--------------EEVWD 117

Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV 183
           K+           L  N   T    +A++P +E      ++ +SS               
Sbjct: 118 KI-----------LHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVG------------- 153

Query: 184 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK 243
                                                  Y VSK  +   T+ LA     
Sbjct: 154 -------------------------AYHPFPN----LGPYNVSKTALLGLTKNLAVELAP 184

Query: 244 F--CVNCVCPGFVKTD 257
               VNC+ PG +KT+
Sbjct: 185 RNIRVNCLAPGLIKTN 200

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  116 bits (294), Expect = 2e-31
 Identities = 52/255 (20%), Positives = 85/255 (33%), Gaps = 73/255 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A+VTG+  GIG       A  G +VV+T    +        ++ +G      +  + +
Sbjct: 13  AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK---AIGLECN 69

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK-FDMDAFADSGYQITKGDAEVDWSKV 125
           ++D     ++      QFGK+ +L NNAG    K FDM                 D+   
Sbjct: 70  VTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMP--------------MSDFEWA 115

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                       K N +   +  +   P ++ +    ++N+SS                 
Sbjct: 116 -----------FKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMA--------------- 149

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                  GE  N       ++Y  SKA +N  TR +A       
Sbjct: 150 -----------------------GENTNVR----MASYGSSKAAVNHLTRNIAFDVGPMG 182

Query: 245 -CVNCVCPGFVKTDI 258
             VN + PG +KTD 
Sbjct: 183 IRVNAIAPGAIKTDA 197

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  116 bits (294), Expect = 2e-31
 Identities = 55/287 (19%), Positives = 91/287 (31%), Gaps = 82/287 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL--KASGVDPELLLFHQ 64
           K AV+TG+  GIG    ++  ++G  V +T R +     A+ ++   A G+        Q
Sbjct: 30  KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGI--------Q 81

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            D ++LA +  L + +K + G++D+L  NAG  S+        +    +T    E  +  
Sbjct: 82  ADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSML----PLGE----VT----EEQYDD 129

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
                          N  G   T +  +PL  L+    +V   S                
Sbjct: 130 T-----------FDRNVKGVLFTVQKALPL--LARGSSVVLTGSTA-----------GST 165

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
           G                                P  S Y  SKA + ++ R         
Sbjct: 166 GT-------------------------------PAFSVYAASKAALRSFARNWILDLKDR 194

Query: 245 --CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
              +N + PG  +T            +       L  L    P GR 
Sbjct: 195 GIRINTLSPGPTETTGLVELAGKDPVQQQG---LLNALAAQVPMGRV 238

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  116 bits (294), Expect = 3e-31
 Identities = 50/254 (19%), Positives = 82/254 (32%), Gaps = 65/254 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A VTGS+ GIG+      A  G  V +         +A    K  GV       ++ +
Sbjct: 35  KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVH---SKAYKCN 91

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ISD  SV       +  FG +D+   NAG+   +            I   + +  W+K+ 
Sbjct: 92  ISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPE---------IDVDNYD-SWNKI- 140

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     +  +  G       +  + + +    L+  SS                  
Sbjct: 141 ----------ISVDLNGVYYCSHNIGKIFKKNGKGSLIITSS------------------ 172

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC- 245
                     +           G+I N       + Y  +KA      + LA  +  F  
Sbjct: 173 ----------IS----------GKIVNIP--QLQAPYNTAKAACTHLAKSLAIEWAPFAR 210

Query: 246 VNCVCPGFVKTDIN 259
           VN + PG++ TDI 
Sbjct: 211 VNTISPGYIDTDIT 224

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  116 bits (293), Expect = 3e-31
 Identities = 53/286 (18%), Positives = 96/286 (33%), Gaps = 71/286 (24%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  V++G    +G    R+ A +G  +VL AR  +R  +  +++  +G      L    D
Sbjct: 12  KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRA---LSVGTD 68

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           I+D A V+ L D     +G++D++ NNA        M  FA++                 
Sbjct: 69  ITDDAQVAHLVDETMKAYGRVDVVINNAFRVP---SMKPFANT--------TFEHMRDA- 116

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     ++   +G  +  +   P LE S    +VN++S V                
Sbjct: 117 ----------IELTVFGALRLIQGFTPALEES-KGAVVNVNSMV---------------- 149

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                    +         AYK++K+ + A ++ LA    +   
Sbjct: 150 ----------------------VRHSQAK----YGAYKMAKSALLAMSQTLATELGEKGI 183

Query: 245 CVNCVCPGFVKTD-INFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
            VN V PG++    +  +    + + G            G    R 
Sbjct: 184 RVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRL 229

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  116 bits (292), Expect = 4e-31
 Identities = 53/265 (20%), Positives = 91/265 (34%), Gaps = 81/265 (30%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M+  + + AVVTG+++GIG    R+L S G  VVLTARD ++      ++ A+G +    
Sbjct: 24  MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGE---A 80

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA-- 118
             H  D+S   ++++ A  +    G+ D+L NNAG                 +       
Sbjct: 81  ESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAG-----------------VGWFGGPL 123

Query: 119 ----EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK 174
                 +W  +           +  N         A  P +  +    ++N+SS      
Sbjct: 124 HTMKPAEWDAL-----------IAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLA---- 168

Query: 175 DLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT 234
                                             G+          +AY  SK  +N   
Sbjct: 169 ----------------------------------GKNPVAD----GAAYTASKWGLNGLM 190

Query: 235 RILAKRYPKF--CVNCVCPGFVKTD 257
              A+   +    V+ V PG V+T+
Sbjct: 191 TSAAEELRQHQVRVSLVAPGSVRTE 215

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  116 bits (292), Expect = 4e-31
 Identities = 57/285 (20%), Positives = 93/285 (32%), Gaps = 75/285 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG+  GIG    ++ A     VV     E R  + V++L+  G +   +L  + D
Sbjct: 8   KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE---VLGVKAD 64

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +S    V          + ++D+L NNAGI      +   A+         ++  W +V 
Sbjct: 65  VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMD---GVTPVAEV--------SDELWERV- 112

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                LAV  L + +Y ++    A+IP++       +VN +S                  
Sbjct: 113 -----LAV-NLYSAFYSSR----AVIPIMLKQGKGVIVNTASIA---------------- 146

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                 G           + Y V+K  +   TR +A  Y     
Sbjct: 147 ----------------------GIRGGFA----GAPYTVAKHGLIGLTRSIAAHYGDQGI 180

Query: 245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
               V PG VKT+      I              L      + R 
Sbjct: 181 RAVAVLPGTVKTN------IGLGSSKPSELGMRTLTKLMSLSSRL 219

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  116 bits (292), Expect = 5e-31
 Identities = 53/255 (20%), Positives = 87/255 (34%), Gaps = 69/255 (27%)

Query: 7   KYAVVTG-SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K  +VT  +  GIG  T R+   +G  VV++   E+R  E  ++L   G+    +     
Sbjct: 23  KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGR--VEAVVC 80

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D++   +V +L      + G+LD+L NNAG+      +D              + +W +V
Sbjct: 81  DVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDM------------TDEEWDRV 128

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                 L V  L +    T+    AL     +     +VN +S +               
Sbjct: 129 ------LNV-TLTSVMRATR---AALRYFRGVDHGGVIVNNASVL--------------- 163

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                  G  A        S Y  +KA + A TR  A    +F 
Sbjct: 164 -----------------------GWRAQHS----QSHYAAAKAGVMALTRCSAIEAVEFG 196

Query: 245 -CVNCVCPGFVKTDI 258
             +N V P   +   
Sbjct: 197 VRINAVSPSIARHKF 211

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  115 bits (291), Expect = 5e-31
 Identities = 56/256 (21%), Positives = 93/256 (36%), Gaps = 71/256 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A+VTG ++GIG+  V +LAS G +V   +R++K   + + + ++ G     +     D
Sbjct: 10  CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK---VEASVCD 66

Query: 67  ISDLASVSSLADFIKTQF-GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           +S  +    L + +   F GKL+IL NNAGI   K   D   +            D+S +
Sbjct: 67  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVE------------DYSLI 114

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      +  N+           P L+ S+   +V +SS                 
Sbjct: 115 -----------MSINFEAAYHLSVLAHPFLKASERGNVVFISSVS--------------- 148

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                  G +A        + Y  +K  ++  TR LA  + K  
Sbjct: 149 -----------------------GALAVPY----EAVYGATKGAMDQLTRCLAFEWAKDN 181

Query: 245 -CVNCVCPGFVKTDIN 259
             VN V PG + T + 
Sbjct: 182 IRVNGVGPGVIATSLV 197

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  115 bits (290), Expect = 8e-31
 Identities = 49/262 (18%), Positives = 83/262 (31%), Gaps = 74/262 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M++  KK A+VTG+  G+G      LA  G  V L  R      E   ++          
Sbjct: 23  MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDA------ 76

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
           L    D++D  SV +L      +FG++D+L NNAG  +    M+    +           
Sbjct: 77  LCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFA----------- 125

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP--RLVNLSSYVSALKDLPE 178
            W +V           + TN  G     +    +++  +    R++N  S +SA      
Sbjct: 126 QWKQV-----------VDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGS-ISAT----- 168

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
                                                  P+S+ Y  +K  I   T+  +
Sbjct: 169 -----------------------------------SPR-PYSAPYTATKHAITGLTKSTS 192

Query: 239 KRYPKF--CVNCVCPGFVKTDI 258
                       +  G   T +
Sbjct: 193 LDGRVHDIACGQIDIGNADTPM 214

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  115 bits (290), Expect = 9e-31
 Identities = 48/285 (16%), Positives = 92/285 (32%), Gaps = 69/285 (24%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  ++TG   G+G  T  +LA++G  + L     +    +   +  +  D E +L    D
Sbjct: 14  RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAE-VLTTVAD 72

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +SD A V +       +FG++D   NNAGI                     A  ++ KV 
Sbjct: 73  VSDEAQVEAYVTATTERFGRIDGFFNNAGI------EGKQNP----TESFTAA-EFDKV- 120

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                +++  L+  + G +     ++ ++    S  +VN +S                  
Sbjct: 121 -----VSI-NLRGVFLGLE----KVLKIMREQGSGMVVNTASVG---------------- 154

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                 G           S Y  +K  +   TR  A  Y ++  
Sbjct: 155 ----------------------GIRGIGN----QSGYAAAKHGVVGLTRNSAVEYGRYGI 188

Query: 245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
            +N + PG + T +      +   +               P+ R+
Sbjct: 189 RINAIAPGAIWTPMV--ENSMKQLDPENPRKAAEEFIQVNPSKRY 231

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  114 bits (289), Expect = 1e-30
 Identities = 59/286 (20%), Positives = 99/286 (34%), Gaps = 78/286 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K  V+TGS+ G+G     + A++   VV+     E      +E++K  G +    +  + 
Sbjct: 8   KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEA---IAVKG 64

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D++  + V +L      +FGKLD++ NNAG+ +     +             +  DW+KV
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEM------------SLSDWNKV 112

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                 +    L   + G++   EA+   +E      ++N+SS                 
Sbjct: 113 ------IDTN-LTGAFLGSR---EAIKYFVENDIKGTVINMSSVH--------------- 147

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                   +I      P    Y  SK  +   T  LA  Y    
Sbjct: 148 -----------------------EKIPW----PLFVHYAASKGGMKLMTETLALEYAPKG 180

Query: 245 -CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             VN + PG + T IN         E    P + A +    P G  
Sbjct: 181 IRVNNIGPGAINTPIN--------AEKFADPEQRADVESMIPMGYI 218

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  114 bits (289), Expect = 1e-30
 Identities = 53/291 (18%), Positives = 94/291 (32%), Gaps = 75/291 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG+   IG  T  +LA +G  + L   + +   +A   ++  GV+      +  D
Sbjct: 8   KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEA---RSYVCD 64

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++   +V    D +   FGK+D L NNAG       +  +              D+++V 
Sbjct: 65  VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSD-----------DFARV- 112

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                L +  +   ++  K    A+   +   +  R+VN +S                  
Sbjct: 113 -----LTI-NVTGAFHVLK----AVSRQMITQNYGRIVNTASMA---------------- 146

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                 G           +AY  SK  I A T   A     +  
Sbjct: 147 ----------------------GVKGPPN----MAAYGTSKGAIIALTETAALDLAPYNI 180

Query: 245 CVNCVCPGFVKTD------INFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
            VN + PG++         +   A + S     +  V    +    P  R+
Sbjct: 181 RVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRY 231

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  114 bits (287), Expect = 1e-30
 Identities = 45/287 (15%), Positives = 94/287 (32%), Gaps = 75/287 (26%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            K  A++TG+++GIG      LA+ G  VVL AR ++   +  +++  S    +  +   
Sbjct: 6   QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLP 65

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           LDI+D     +    I  ++G +DIL N A +       +                ++ K
Sbjct: 66  LDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVD-------------NFRK 112

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           +           ++ N        + +  ++++  +  + N++S                
Sbjct: 113 I-----------MEINVIAQYGILKTVTEIMKVQKNGYIFNVASRA-------------- 147

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                    +            Y  +K  +      L +     
Sbjct: 148 ------------------------AKYGF----ADGGIYGSTKFALLGLAESLYRELAPL 179

Query: 245 C--VNCVCPGFVKTDINFHAG-------ILSVEEGAESPVKLALLPD 282
              V  +CPG+V TD+   AG       ++  ++   +   L  L +
Sbjct: 180 GIRVTTLCPGWVNTDMAKKAGTPFKDEEMIQPDDLLNTIRCLLNLSE 226

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  114 bits (289), Expect = 2e-30
 Identities = 54/269 (20%), Positives = 102/269 (37%), Gaps = 80/269 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPEL 59
           M +  +  A+VTG  +GIG    R LA+ G  + +T   D +     + +L   G     
Sbjct: 24  MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGAR--- 80

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFD----MDAFADSGYQITK 115
           ++F + D++DL+S  +  D +  +FG++D L NNAGIAS+  D    +            
Sbjct: 81  VIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDL------------ 128

Query: 116 GDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL---ELSDSPRLVNLSSYVSA 172
                ++  +           +  N  GT    +A++  +   +   S  ++N++S    
Sbjct: 129 --KPENFDTI-----------VGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVS-- 173

Query: 173 LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINA 232
                                                 + +         Y +SKA + A
Sbjct: 174 ------------------------------------AVMTSPE----RLDYCMSKAGLAA 193

Query: 233 YTRILAKRYPKF--CVNCVCPGFVKTDIN 259
           +++ LA R  +    V  V PG +++D+ 
Sbjct: 194 FSQGLALRLAETGIAVFEVRPGIIRSDMT 222

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  114 bits (287), Expect = 2e-30
 Identities = 53/285 (18%), Positives = 88/285 (30%), Gaps = 74/285 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL--TARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K  +VTG ++GIG   V  L S     V+   AR E    +  EK            +  
Sbjct: 3   KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRF------FYVV 56

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            DI++ + +  L +      GK+D L  NAG+      +    +        D    W K
Sbjct: 57  GDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLE---PVQNVNEI-------DVN-AWKK 105

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           +              N++         +P L+ + +  +V +SS                
Sbjct: 106 L-----------YDINFFSIVSLVGIALPELKKT-NGNVVFVSSDA-------------- 139

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                     +    W     AY  SKA +N +   LA    + 
Sbjct: 140 ------------------------CNMYFSSW----GAYGSSKAALNHFAMTLANEERQV 171

Query: 245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
               V PG V TD+  +    +V   + S  +L +        + 
Sbjct: 172 KAIAVAPGIVDTDMQVNIR-ENVGPSSMSAEQLKMFRGLKENNQL 215

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  114 bits (287), Expect = 3e-30
 Identities = 61/293 (20%), Positives = 97/293 (33%), Gaps = 75/293 (25%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           + + + + A+VTG +KGIG    R L   G TV +   D       V  L+  G      
Sbjct: 7   IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGF----- 61

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
              ++D++  ASV +         G  D+L  NAG+++++  +D        IT    + 
Sbjct: 62  -AVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVD--------IT----DE 108

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEK 179
           +W                 N  G     +      L  +    +VN +S           
Sbjct: 109 EWDFN-----------FDVNARGVFLANQIACRHFLASNTKGVIVNTASLA--------- 148

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
                                         ++         + Y  SK  +  +T+ LA+
Sbjct: 149 -----------------------------AKVGAPL----LAHYSASKFAVFGWTQALAR 175

Query: 240 RYPKF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVKL-ALLPDGGPTGRF 289
                   VNCVCPGFVKT +     I   E    +P  + A      P GR 
Sbjct: 176 EMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRI 228

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  113 bits (286), Expect = 3e-30
 Identities = 55/260 (21%), Positives = 88/260 (33%), Gaps = 71/260 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A+VTGS++G+G     +LA  G  +V+  AR +K  LE  E+++  GV    +L  + 
Sbjct: 5   KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK---VLVVKA 61

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           ++   A +  +   I   FG+LD+  NNA    ++  M+              E  W   
Sbjct: 62  NVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMEL------------EETHWDWT 109

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      +  N        +    L+E +    +V++SS                 
Sbjct: 110 -----------MNINAKALLFCAQEAAKLMEKNGGGHIVSISSLG--------------- 143

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                            + +   VSKA + A TR LA       
Sbjct: 144 -----------------------SIRYL----ENYTTVGVSKAALEALTRYLAVELSPKQ 176

Query: 245 -CVNCVCPGFVKTDINFHAG 263
             VN V  G + TD   H  
Sbjct: 177 IIVNAVSGGAIDTDALKHFP 196

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  113 bits (284), Expect = 8e-30
 Identities = 56/291 (19%), Positives = 87/291 (29%), Gaps = 74/291 (25%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M+    K A+VTG++ GIG       A +G  VV+TAR+     E  +++   G +    
Sbjct: 3   MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE---A 59

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D+ D A   +L +    +FG LD   NNAG      ++ + +             
Sbjct: 60  AALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVE----------- 108

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
            W +       L    L + +   K      +P +       L   SS+V          
Sbjct: 109 GWRET------LDT-NLTSAFLAAK----YQVPAIAALGGGSLTFTSSFVGHT------- 150

Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                                             G+    + Y  SKA +    + LA  
Sbjct: 151 ---------------------------------AGF-AGVAPYAASKAGLIGLVQALAVE 176

Query: 241 YPKF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
                  VN + PG   T  NF     +  E       L          R 
Sbjct: 177 LGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLH------ALKRI 221

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  112 bits (282), Expect = 9e-30
 Identities = 51/259 (19%), Positives = 82/259 (31%), Gaps = 80/259 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTGS  GIG      LA +G  VV+   + +      +++ A G      +   +D
Sbjct: 10  KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT---AISVAVD 66

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK-----FDMDAFADSGYQITKGDAEVD 121
           +SD  S  ++AD    +FG +D L NNA I           +D                 
Sbjct: 67  VSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTID--------------PEY 112

Query: 122 WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR 181
           + K            +  N  G      A+   +       +VN SS             
Sbjct: 113 YKKF-----------MSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTA----------- 150

Query: 182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 241
           A L                                   S+ Y ++K  IN  T+ L++  
Sbjct: 151 AWLY----------------------------------SNYYGLAKVGINGLTQQLSREL 176

Query: 242 PKF--CVNCVCPGFVKTDI 258
                 +N + PG + T+ 
Sbjct: 177 GGRNIRINAIAPGPIDTEA 195

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  112 bits (283), Expect = 1e-29
 Identities = 41/262 (15%), Positives = 80/262 (30%), Gaps = 70/262 (26%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
                 + A+VTG   G+G    + L+++G +VV+T R       A  ++        ++
Sbjct: 28  KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT--GNIV 85

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D+ D   V++L   ++ +F +LD+L NNAG       ++                
Sbjct: 86  RAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFE----------- 134

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP--RLVNLSSYVSALKDLPE 178
            W+ +           +  N  G     +    +++       R++N  S          
Sbjct: 135 QWNGI-----------VAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSIS-------- 175

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
                                          +       P+S+ Y  +K  I   T+  A
Sbjct: 176 ------------------------------AQTPR----PNSAPYTATKHAITGLTKSTA 201

Query: 239 KRYPKF--CVNCVCPGFVKTDI 258
                       +  G   TD+
Sbjct: 202 LDGRMHDIACGQIDIGNAATDM 223

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  112 bits (282), Expect = 1e-29
 Identities = 36/256 (14%), Positives = 76/256 (29%), Gaps = 75/256 (29%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           +    ++TG+++ +G     +L   G  V+++ R E   +  + +  A  +         
Sbjct: 26  SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVAL--------Y 77

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            D S    + +  D +KTQ   L  + +NA      +  +   +            ++++
Sbjct: 78  GDFSCETGIMAFIDLLKTQTSSLRAVVHNASE----WLAETPGEE---------ADNFTR 124

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           +              +            PLL  S+   +V++S  V              
Sbjct: 125 M-----------FSVHMLAPYLINLHCEPLLTASEVADIVHISDDV-------------- 159

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PK 243
                                       +        AY  +KA + + T   A R+ P 
Sbjct: 160 ------------------------TRKGS----SKHIAYCATKAGLESLTLSFAARFAPL 191

Query: 244 FCVNCVCPGFVKTDIN 259
             VN + P  +     
Sbjct: 192 VKVNGIAPALLMFQPK 207

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  112 bits (282), Expect = 1e-29
 Identities = 62/291 (21%), Positives = 100/291 (34%), Gaps = 80/291 (27%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M E T K A+VTG + GIG   V  L   G  VV  + DEK  +   +            
Sbjct: 9   MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSD------------ 56

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
              ++D+++   V    +    ++G++DIL NNAGI                +     E 
Sbjct: 57  -HFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYS-----------PLHLTPTE- 103

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
            W ++      + V  +  +Y   K      IP++       ++N++S            
Sbjct: 104 IWRRI------IDV-NVNGSYLMAK----YTIPVMLAIGHGSIINIASVQ---------- 142

Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                                          A      +++AY  SK  +   TR +A  
Sbjct: 143 ----------------------------SYAAT----KNAAAYVTSKHALLGLTRSVAID 170

Query: 241 Y-PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVK-LALLPDGGPTGRF 289
           Y PK   N VCPG + T +   A  + V E   +  + +       P GR 
Sbjct: 171 YAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRI 221

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  112 bits (283), Expect = 2e-29
 Identities = 50/261 (19%), Positives = 85/261 (32%), Gaps = 71/261 (27%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           ++    + AVVTG   GIG  T  + A +G  +VL+  D+    +AV  L+  G D    
Sbjct: 26  LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFD---A 82

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                D+  L  +  LAD      G +D++ +NAGI           D            
Sbjct: 83  HGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHD------------ 130

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP-RLVNLSSYVSALKDLPEK 179
           DW  V      + +     + +G+    EA +P L    +   +   +S           
Sbjct: 131 DWRWV------IDI-----DLWGSIHAVEAFLPRLLEQGTGGHIAFTAS----------- 168

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
              ++ +                                    Y V+K  +      LA+
Sbjct: 169 FAGLVPN-------------------------------AGLGTYGVAKYGVVGLAETLAR 197

Query: 240 RYPKF--CVNCVCPGFVKTDI 258
                   V+ +CP  V+T +
Sbjct: 198 EVKPNGIGVSVLCPMVVETKL 218

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  112 bits (282), Expect = 2e-29
 Identities = 50/256 (19%), Positives = 86/256 (33%), Gaps = 69/256 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG++ GIG +     A  G  V + AR         +++   G      L  + D
Sbjct: 33  KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK---ALPIRCD 89

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++    V  + D +  + G +DI   NAGI SV+  +D                ++ ++ 
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDM------------PLEEFQRI- 136

Query: 127 YQTYELAVECLKTNYYGTKQTC-EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                       TN  G   T   A   +++      ++  +S                 
Sbjct: 137 ----------QDTNVTGVFLTAQAAARAMVDQGLGGTIITTAS----------------- 169

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                      M           G I N       S Y  SKA +   T+ +A       
Sbjct: 170 -----------MS----------GHIINIP--QQVSHYCTSKAAVVHLTKAMAVELAPHQ 206

Query: 245 -CVNCVCPGFVKTDIN 259
             VN V PG+++T++ 
Sbjct: 207 IRVNSVSPGYIRTELV 222

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  111 bits (281), Expect = 2e-29
 Identities = 56/265 (21%), Positives = 80/265 (30%), Gaps = 80/265 (30%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M +   +  VVTG  KGIG       A  G  V +  R        V  L   G     +
Sbjct: 5   MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGK--V 62

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA-- 118
           +  Q D+SD A   +LA     +FG +D++  NAG                 +   DA  
Sbjct: 63  IGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAG-----------------VFP-DAPL 104

Query: 119 ----EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK 174
                   + +              N  GT    +A +  L  S S R+V  SS      
Sbjct: 105 ATMTPEQLNGI-----------FAVNVNGTFYAVQACLDALIASGSGRVVLTSS------ 147

Query: 175 DLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT 234
                   + G +                           GW    S Y  +KA    + 
Sbjct: 148 --------ITGPI-----------------------TGYPGW----SHYGATKAAQLGFM 172

Query: 235 RILAKRYPKF--CVNCVCPGFVKTD 257
           R  A         VN + PG + T+
Sbjct: 173 RTAAIELAPHKITVNAIMPGNIMTE 197

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  111 bits (281), Expect = 2e-29
 Identities = 51/284 (17%), Positives = 85/284 (29%), Gaps = 68/284 (23%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A++TG   G+G   V +  ++G  V +  +  +R  E       +       +    D
Sbjct: 6   EVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNA------VGVVGD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +  L      A+     FGK+D L  NAGI      +         + +   +  +  + 
Sbjct: 60  VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALA-------DLPEDKIDAAFDDI- 111

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                        N  G     +A +P L +S    +V   S                  
Sbjct: 112 ----------FHVNVKGYIHAVKACLPAL-VSSRGSVVFTISNA---------------- 144

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFC 245
                                 G   N G       Y  +K  +    R +A    P   
Sbjct: 145 ----------------------GFYPNGG----GPLYTATKHAVVGLVRQMAFELAPHVR 178

Query: 246 VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
           VN V PG + TD+   + +   E+   S     +L    P GR 
Sbjct: 179 VNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRM 222

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  111 bits (279), Expect = 2e-29
 Identities = 55/286 (19%), Positives = 97/286 (33%), Gaps = 76/286 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           + A+VTG++ G G     +  ++G  V       +   E       A       +L  + 
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADK---VLRVRA 59

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D++D   V++       QFG +D+L NNAGI                +     E  + KV
Sbjct: 60  DVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGV--------LHTTPVE-QFDKV 110

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                 +AV  ++  + G +    A++P + L  +  +VN++S V++L            
Sbjct: 111 ------MAVN-VRGIFLGCR----AVLPHMLLQGAGVIVNIAS-VASL------------ 146

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                         + P  SAY  SK  +   T+ +A  Y    
Sbjct: 147 ----------------------------VAF-PGRSAYTTSKGAVLQLTKSVAVDYAGSG 177

Query: 245 -CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
              N VCPG ++T +         +   + P     +    P    
Sbjct: 178 IRCNAVCPGMIETPM--------TQWRLDQPELRDQVLARIPQKEI 215

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  111 bits (279), Expect = 2e-29
 Identities = 49/261 (18%), Positives = 86/261 (32%), Gaps = 77/261 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M    +K  V+TG+++GIG   VR    +   VV T+R  K   +              +
Sbjct: 23  MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPD------------I 70

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
                DIS   +   +      +FG++D L NNAG+   K  ++              + 
Sbjct: 71  HTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEM------------TQE 118

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
           D+              L  N  G     +     +    S  +V++++ +          
Sbjct: 119 DYDHN-----------LGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSL---------- 157

Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                                        +    G    S+   ++K  +NA TR LA  
Sbjct: 158 ----------------------------VDQPMVGMP--SALASLTKGGLNAVTRSLAME 187

Query: 241 YPKF--CVNCVCPGFVKTDIN 259
           + +    VN V PG +KT ++
Sbjct: 188 FSRSGVRVNAVSPGVIKTPMH 208

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  110 bits (278), Expect = 3e-29
 Identities = 34/288 (11%), Positives = 76/288 (26%), Gaps = 80/288 (27%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           +  + +VTG+  G+G      L  +G  V +  R  +R  +    L         ++   
Sbjct: 2   SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL------GNAVIGIV 55

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            D++    V           G  +++ + AG                 +    AE    +
Sbjct: 56  ADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFG-----------PVGVYTAE-QIRR 103

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           V           +++N   T    +  + L+       L N+ S                
Sbjct: 104 V-----------MESNLVSTILVAQQTVRLI-GERGGVLANVLSSA-------------- 137

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                    ++       + S Y  SK  +  +   L       
Sbjct: 138 ------------------------AQVGK----ANESLYCASKWGMRGFLESLRAELKDS 169

Query: 245 C--VNCVCPGFVKTDINFHA------GILSVEEGAESPVKLALLPDGG 284
              +  + P  ++++   +       G ++ E+ A   +         
Sbjct: 170 PLRLVNLYPSGIRSEFWDNTDHVDPSGFMTPEDAAAYMLDALEARSSC 217

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  111 bits (279), Expect = 3e-29
 Identities = 55/293 (18%), Positives = 94/293 (32%), Gaps = 85/293 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
            ++   K  +VTG++ GIG     +   +G  V+  +  +    +               
Sbjct: 3   FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYD------------- 49

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDA 118
              + D+++   V +  D I  ++G + +L NNAGI S      M               
Sbjct: 50  -HIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMS-------------- 94

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
             +W ++      + V  L   YY +K      IP +  S  P +VN+SS          
Sbjct: 95  MGEWRRI------IDVN-LFGYYYASK----FAIPYMIRSRDPSIVNISSVQ-------- 135

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
                                           I       ++SAY  SK  +   T+ +A
Sbjct: 136 ------------------------------ASIIT----KNASAYVTSKHAVIGLTKSIA 161

Query: 239 KRY-PKFCVNCVCPGFVKTDIN-FHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             Y P    N VCP  + T +    A +    +      K++      P  R 
Sbjct: 162 LDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRI 214

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  111 bits (279), Expect = 3e-29
 Identities = 49/280 (17%), Positives = 85/280 (30%), Gaps = 78/280 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  ++TG+  GIG  T  + A     +VL   ++    E   K K  G     +    +D
Sbjct: 32  EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK---VHTFVVD 88

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
            S+   + S A  +K + G + IL NNAG+                    D +++ +   
Sbjct: 89  CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFAT----------QDPQIEKT--- 135

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                      + N      T +A +P +  ++   +V ++S                  
Sbjct: 136 ----------FEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAA---------------- 169

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL-----AKRY 241
                                 G ++     P   AY  SK     + + L     A + 
Sbjct: 170 ----------------------GHVSV----PFLLAYCSSKFAAVGFHKTLTDELAALQI 203

Query: 242 PKFCVNCVCPGFVKTDI-----NFHAGILSVEEGAESPVK 276
                 C+CP FV T             L  EE     + 
Sbjct: 204 TGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMH 243

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  110 bits (278), Expect = 3e-29
 Identities = 56/257 (21%), Positives = 88/257 (34%), Gaps = 74/257 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG   GIG     +   +G  V++T R    G +A + +         + F Q D
Sbjct: 7   KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQ----IQFFQHD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
            SD    + L D  +  FG +  L NNAGIA  K            + +     +W K+ 
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNK-----------SVEETTTA-EWRKL- 109

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP-RLVNLSSYVSALKDLPEKARAVLG 185
                LAV  L   ++GT+      I  ++       ++N+SS +               
Sbjct: 110 -----LAV-NLDGVFFGTR----LGIQRMKNKGLGASIINMSS-IEGF------------ 146

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC 245
                                        G  P   AY  SK  +   ++  A       
Sbjct: 147 ----------------------------VGD-PSLGAYNASKGAVRIMSKSAALDCALKD 177

Query: 246 ----VNCVCPGFVKTDI 258
               VN V PG++KT +
Sbjct: 178 YDVRVNTVHPGYIKTPL 194

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  110 bits (278), Expect = 3e-29
 Identities = 46/257 (17%), Positives = 78/257 (30%), Gaps = 75/257 (29%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           KK A+VTG+ +GIG     +L   G  V +   ++        ++  +G      +  ++
Sbjct: 2   KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH---AVAVKV 58

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDAEVDWS 123
           D+SD   V +  +  +   G  D++ NNAG+A       +                    
Sbjct: 59  DVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESIT--------------PEIVD 104

Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARA 182
           KV              N  G     +A +    +     +++N  S              
Sbjct: 105 KV-----------YNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQA------------ 141

Query: 183 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP 242
                                     G + N       + Y  SK  +   T+  A+   
Sbjct: 142 --------------------------GHVGNPEL----AVYSSSKFAVRGLTQTAARDLA 171

Query: 243 KF--CVNCVCPGFVKTD 257
                VN  CPG VKT 
Sbjct: 172 PLGITVNGYCPGIVKTP 188

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  110 bits (278), Expect = 4e-29
 Identities = 48/255 (18%), Positives = 86/255 (33%), Gaps = 76/255 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTGS  GIG      L ++G  V++  R E+   E +++++A   D   L     D
Sbjct: 11  KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAI-LQPVVAD 69

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDAEVDWSK 124
           +        + +    ++ K+DIL NN GI      FD+               + DW K
Sbjct: 70  LGTEQGCQDVIE----KYPKVDILINNLGIFEPVEYFDIP--------------DEDWFK 111

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           +            + N     +   + +  +      R++ ++S  +A+    E A    
Sbjct: 112 L-----------FEVNIMSGVRLTRSYLKKMIERKEGRVIFIAS-EAAIMPSQEMA---- 155

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                                 Y  +K +  + +R LA+     
Sbjct: 156 -------------------------------------HYSATKTMQLSLSRSLAELTTGT 178

Query: 245 --CVNCVCPGFVKTD 257
              VN + PG   T+
Sbjct: 179 NVTVNTIMPGSTLTE 193

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  110 bits (277), Expect = 5e-29
 Identities = 54/293 (18%), Positives = 83/293 (28%), Gaps = 84/293 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M     K  +VTG  +GIG    +  A +G  V L     + G E  E +          
Sbjct: 1   MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIGG-------- 51

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDA 118
            F Q+D+ D        +      G++D+L NNA IA+      +               
Sbjct: 52  AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVR-------------- 97

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
             +W +V      L V  L    + +          +       +VN++S          
Sbjct: 98  LPEWRRV------LEVN-LTAPMHLSA----LAAREMRKVGGGAIVNVASVQ-------- 138

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
                                         G  A +      +AY  SK  +   TR LA
Sbjct: 139 ------------------------------GLFAEQEN----AAYNASKGGLVNLTRSLA 164

Query: 239 KRYPKF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
                    VN V PG + T+    A    +    +         D     R 
Sbjct: 165 LDLAPLRIRVNAVAPGAIATEAVLEA----IALSPDPERTRRDWEDLHALRRL 213

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  110 bits (277), Expect = 5e-29
 Identities = 50/289 (17%), Positives = 83/289 (28%), Gaps = 84/289 (29%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
            V++G   GIG  T + L + G  +V     +      V                  D+S
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRD----AEV----------------IADLS 43

Query: 69  DLASV-SSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCY 127
                  ++AD +      +D L   AG+                            V  
Sbjct: 44  TAEGRKQAIADVLAKCSKGMDGLVLCAGLGP-------------------QTKVLGNV-- 82

Query: 128 QTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV 187
                    +  NY+G  +  +A +P L+    P  V +SS V++     +K    L   
Sbjct: 83  ---------VSVNYFGATELMDAFLPALKKGHQPAAVVISS-VASAHLAFDKNPLALALE 132

Query: 188 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK-------R 240
                +   +V              + G    + AY  SK  +    R  A        R
Sbjct: 133 AGEEAKARAIV-------------EHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVR 179

Query: 241 YPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
                +N + PG  +T +      L      E     ++     P GR 
Sbjct: 180 -----LNTIAPGATETPLL--QAGLQDPRYGE-----SIAKFVPPMGRR 216

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  110 bits (278), Expect = 6e-29
 Identities = 54/264 (20%), Positives = 99/264 (37%), Gaps = 76/264 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           MA    + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+ +  
Sbjct: 17  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR 76

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIA--SVKFDMDAFADSGYQITKGDA 118
                D+  +  + +L   +  ++G +D+L NNAG        ++               
Sbjct: 77  ---TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELA-------------- 119

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL--SDSPRLVNLSSYVSALKDL 176
           +  W  V           ++TN  G  +  + ++    +    + R+VN++S        
Sbjct: 120 DELWLDV-----------VETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG------ 162

Query: 177 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI 236
                                           G+       P    Y  SK  +  +T+ 
Sbjct: 163 --------------------------------GKQGVVHAAP----YSASKHGVVGFTKA 186

Query: 237 LAKRYPKF--CVNCVCPGFVKTDI 258
           L     +    VN VCPGFV+T +
Sbjct: 187 LGLELARTGITVNAVCPGFVETPM 210

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  110 bits (277), Expect = 7e-29
 Identities = 58/289 (20%), Positives = 94/289 (32%), Gaps = 84/289 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           K A++TG+ KGIG +  R  A+ G  +VL+ RD      A   L +  G D   +    +
Sbjct: 21  KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTD---VHTVAI 77

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDAEVDWS 123
           D+++  + + LA      FG LD+L NNAGI+  +   D D                 + 
Sbjct: 78  DLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTD--------------PQLFD 123

Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARA 182
                        +  N         A+   ++   +   ++ ++S              
Sbjct: 124 AT-----------IAVNLRAPALLASAVGKAMVAAGEGGAIITVASAA------------ 160

Query: 183 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP 242
                                              P   AY  SKA +   T++LA+   
Sbjct: 161 --------------------------ALAPL----PDHYAYCTSKAGLVMATKVLARELG 190

Query: 243 KF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
                 N VCP  V T++         +       K A +    P GRF
Sbjct: 191 PHGIRANSVCPTVVLTEMG--------QRVWGDEAKSAPMIARIPLGRF 231

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  110 bits (277), Expect = 9e-29
 Identities = 64/295 (21%), Positives = 100/295 (33%), Gaps = 74/295 (25%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV--EKLKASGVDPE 58
                 K AV+TGS  GIG    R LA  G  +VL        +  V  E    S     
Sbjct: 20  FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGT-- 77

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA 118
            +L H  D++  + ++ +   +  +FG  DIL NNAG+  V+   D F            
Sbjct: 78  -VLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIED-FPVE--------- 126

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
              W ++           +  N   +  T    IP ++     R++N++S          
Sbjct: 127 --QWDRI-----------IAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAH-------- 165

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
                                         G +A+    P  SAY  +K  I   T+ +A
Sbjct: 166 ------------------------------GLVAS----PFKSAYVAAKHGIMGLTKTVA 191

Query: 239 KRYPKFC--VNCVCPGFVKTDI--NFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
               +    VN +CPG+V T +               E  V   ++  G PT +F
Sbjct: 192 LEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKF 246

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  110 bits (278), Expect = 1e-28
 Identities = 55/266 (20%), Positives = 91/266 (34%), Gaps = 74/266 (27%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           + +   + A VTG   G+G   VRQL ++G  V +    +    +A+  L+A G  PE++
Sbjct: 3   LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVM 62

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
              QLD++        AD ++ +FG + IL NNAG+   +       +S Y         
Sbjct: 63  -GVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQ----PIEESSYD-------- 109

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP------RLVNLSSYVSALK 174
           DW  +      L V     N +G        +P +             +VN +S      
Sbjct: 110 DWDWL------LGV-----NLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTAS------ 152

Query: 175 DLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT 234
                                               +A          Y  +K  +   +
Sbjct: 153 ------------------------------------MAAFLAAGSPGIYNTTKFAVRGLS 176

Query: 235 RILAKRYPKFC--VNCVCPGFVKTDI 258
             L     K+   V+ +CPG VK+ I
Sbjct: 177 ESLHYSLLKYEIGVSVLCPGLVKSYI 202

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  110 bits (276), Expect = 1e-28
 Identities = 69/316 (21%), Positives = 109/316 (34%), Gaps = 94/316 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  V+TG+N G+G  T R+LA +G TV++  RD ++G  A   +         +   +LD
Sbjct: 17  RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ------VEVRELD 70

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           + DL+SV   AD         D+L NNAGI +V           Y +T            
Sbjct: 71  LQDLSSVRRFAD----GVSGADVLINNAGIMAVP----------YALTV----------- 105

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
              +E     + TN+ G      AL  LL    + R+V +SS       +         +
Sbjct: 106 -DGFES---QIGTNHLG----HFALTNLLLPRLTDRVVTVSSMAHWPGRI---------N 148

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSK-AVINAYTRILAKRY---- 241
           +E+L         + Y             W     AY  SK A +  +T  L +R     
Sbjct: 149 LEDLNWRS-----RRY-----------SPW----LAYSQSKLANL-LFTSELQRRLTAAG 187

Query: 242 PKFCVNCVCPGFVKTDINFHAG---------------ILSVEEGAESPVKLALLPDG--- 283
                    PG+  T++   +G                   + GA   +  A        
Sbjct: 188 SPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYAASQDLPGDS 247

Query: 284 --GPTGRFFLRKEEAP 297
             GP   +  R +   
Sbjct: 248 FVGPRFGYLGRTQPVG 263

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  109 bits (274), Expect = 2e-28
 Identities = 62/264 (23%), Positives = 93/264 (35%), Gaps = 77/264 (29%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFH 63
           T K A+VTG+++GIG     +LAS G TVV+  A       E   K++A+G         
Sbjct: 26  TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTA--- 82

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWS 123
           Q D+SD A+V  L    +  FG +D+L NNAGI  +    +              +  + 
Sbjct: 83  QADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAET------------GDAVFD 130

Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV 183
           +V           +  N  GT  T       L      R++N+S+               
Sbjct: 131 RV-----------IAVNLKGTFNTLREAAQRLR--VGGRIINMSTSQ------------- 164

Query: 184 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK---- 239
                                      + +    P    Y  +KA + A T +L+K    
Sbjct: 165 -------------------------VGLLH----PSYGIYAAAKAGVEAMTHVLSKELRG 195

Query: 240 RYPKFCVNCVCPGFVKTDINFHAG 263
           R     VN V PG   TD+     
Sbjct: 196 R--DITVNAVAPGPTATDLFLEGK 217

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  109 bits (275), Expect = 2e-28
 Identities = 58/297 (19%), Positives = 96/297 (32%), Gaps = 79/297 (26%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPEL 59
            A    K A+VTG+ +GIG E   +L  +G  V++  A   +   E V  +K +G D   
Sbjct: 24  SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAAC 83

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAE 119
           +   + ++  +  +  + +     FGKLDI+ +N+G+ S     D               
Sbjct: 84  V---KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDV------------TP 128

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK 179
            ++ +V              N  G           LE     RL+ + S           
Sbjct: 129 EEFDRV-----------FTINTRGQFFVAREAYKHLE--IGGRLILMGS----------- 164

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
              + G  + +                           P  + Y  SK  I  + R +A 
Sbjct: 165 ---ITGQAKAV---------------------------PKHAVYSGSKGAIETFARCMAI 194

Query: 240 ----RYPKFCVNCVCPGFVKTDINFHAGILSVEEG---AESPVKLALLPDGGPTGRF 289
               +  K  VN V PG +KTD+        +  G   +   V         P  R 
Sbjct: 195 DMADK--KITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRV 249

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  108 bits (273), Expect = 2e-28
 Identities = 58/286 (20%), Positives = 97/286 (33%), Gaps = 73/286 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTGS  GIG    + LA  G  +VL    +     A+ ++   GV     + H  D
Sbjct: 5   KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKA---VHHPAD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +SD+A + +L    + +FG +DIL NNAGI  V      F               W K+ 
Sbjct: 60  LSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQ-FPLE-----------SWDKI- 106

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     +  N           +P +   +  R++N++S                  
Sbjct: 107 ----------IALNLSAVFHGTRLALPGMRARNWGRIINIASVH---------------- 140

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC- 245
                                 G + +       +AY  +K  +   T+++         
Sbjct: 141 ----------------------GLVGS----TGKAAYVAAKHGVVGLTKVVGLETATSNV 174

Query: 246 -VNCVCPGFVKTD-INFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             N +CPG+V T  +       +   G     +  LL +  P+  F
Sbjct: 175 TCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAF 220

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  109 bits (275), Expect = 2e-28
 Identities = 64/293 (21%), Positives = 100/293 (34%), Gaps = 79/293 (26%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             + A VTG + GIG    R LA++GI V   ARD K    AV+ L+A+G D   +    
Sbjct: 23  RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD---VDGSS 79

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDAEVDW 122
            D++    V +       +FG + IL N+AG        D+D              +  W
Sbjct: 80  CDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLD--------------DALW 125

Query: 123 SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--SPRLVNLSSYVSALKDLPEKA 180
           + V           L TN  G  +    ++    + +    R+VN++S            
Sbjct: 126 ADV-----------LDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTG---------- 164

Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                                       G+         ++ Y  SK  +  +T+ +   
Sbjct: 165 ----------------------------GKQGVMY----AAPYTASKHGVVGFTKSVGFE 192

Query: 241 YPKF--CVNCVCPGFVKTDI--NFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             K    VN VCPG+V+T +      G        E  V         P GR+
Sbjct: 193 LAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFN-AKIPLGRY 244

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  109 bits (275), Expect = 2e-28
 Identities = 60/287 (20%), Positives = 89/287 (31%), Gaps = 80/287 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+  GIG    R+LA +G  V+    D      A  K+             ++D
Sbjct: 30  KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGA------AACRVD 83

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDAEVDWSK 124
           +SD   + ++ D     FG +D L  NAG+  +    D                  D+ +
Sbjct: 84  VSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTT--------------VEDFDR 129

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           V      +A+  L+  +  TK       P +       +VNLSS                
Sbjct: 130 V------IAI-NLRGAWLCTK----HAAPRMIERGGGAIVNLSSLA-------------- 164

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                   G++A  G      AY +SKA I   +RI A      
Sbjct: 165 ------------------------GQVAVGGT----GAYGMSKAGIIQLSRITAAELRSS 196

Query: 245 --CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
               N + P FV T +                   A        GR 
Sbjct: 197 GIRSNTLLPAFVDTPM---QQTAMAMFDGALGAGGARSMIARLQGRM 240

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  108 bits (273), Expect = 2e-28
 Identities = 54/287 (18%), Positives = 88/287 (30%), Gaps = 84/287 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K AV+TG   GIG     + A +G  + +         EA   ++  G     +L  + D
Sbjct: 8   KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRR---VLTVKCD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDAEVDWSK 124
           +S    V +    + + FG+ DIL NNAGI  +    ++                  W K
Sbjct: 63  VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELT--------------FEQWKK 108

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
                        + N        +A +P ++ +   R++NL+S                
Sbjct: 109 T-----------FEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTT-------------- 143

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                     +    +    + Y  +KA    +TR LA    K 
Sbjct: 144 ------------------------YWLKIEAY----THYISTKAANIGFTRALASDLGKD 175

Query: 245 --CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
              VN + P  V+T           E  A S +   L        R 
Sbjct: 176 GITVNAIAPSLVRTAT--------TEASALSAMFDVLPNMLQAIPRL 214

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  109 bits (274), Expect = 2e-28
 Identities = 49/277 (17%), Positives = 83/277 (29%), Gaps = 74/277 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
           K  +VTG++KGIG E    LA  G  VV+TAR ++  L+ V       G      +    
Sbjct: 29  KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKET-LQKVVSHCLELGAASAHYI--AG 85

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
            + D+              G LD+L  N    +              +   D      K 
Sbjct: 86  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN-----------LFHDDIH-HVRKS 133

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      ++ N+        A +P+L+ S +  +V +SS                 
Sbjct: 134 -----------MEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLA--------------- 166

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL----AKRY 241
                                  G++A     P  +AY  SK  ++ +   +    +   
Sbjct: 167 -----------------------GKVAY----PMVAAYSASKFALDGFFSSIRKEYSVSR 199

Query: 242 PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLA 278
               +     G + T+    A    V   A    + A
Sbjct: 200 VNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECA 236

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  108 bits (273), Expect = 2e-28
 Identities = 49/254 (19%), Positives = 87/254 (34%), Gaps = 73/254 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG  +G+G E  RQ  + G  VVL    ++ G     +L  +        +  LD
Sbjct: 6   KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAA------RYQHLD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++       +  + + +FG +D L NNAGI++  F                +   + KV 
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETE------------SVERFRKV- 106

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                + +  L   + G K     +IP ++ +    +VN+SS                  
Sbjct: 107 -----VEIN-LTGVFIGMK----TVIPAMKDAGGGSIVNISSAA---------------- 140

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                 G +        +S+Y  SK  +   +++ A        
Sbjct: 141 ----------------------GLMGL----ALTSSYGASKWGVRGLSKLAAVELGTDRI 174

Query: 245 CVNCVCPGFVKTDI 258
            VN V PG   T +
Sbjct: 175 RVNSVHPGMTYTPM 188

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  108 bits (273), Expect = 2e-28
 Identities = 58/260 (22%), Positives = 86/260 (33%), Gaps = 71/260 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           K  +VTG N+GIG    R +A+ G  V +  R     +E  EK+ K  GV       +Q 
Sbjct: 15  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK---TKAYQC 71

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D+S+   V+     I    G +  L  NAG++ VK   +                D++ V
Sbjct: 72  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATE------------LTHEDFAFV 119

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALI-PLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
                         N +G   TC A+    L+      +V  SS                
Sbjct: 120 -----------YDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSS---------------- 152

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWC---PHSSAYKVSKAVINAYTRILAKRY 241
                       M            +I N+           Y  SKA  +   + LA  +
Sbjct: 153 ------------MS----------SQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEW 190

Query: 242 PKF--CVNCVCPGFVKTDIN 259
                 VN + PG+V TD  
Sbjct: 191 ASAGIRVNALSPGYVNTDQT 210

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  108 bits (273), Expect = 3e-28
 Identities = 63/285 (22%), Positives = 93/285 (32%), Gaps = 80/285 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG+  GIG ET R LA  G  VVL    E     A   +          + H +D
Sbjct: 12  KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGA------VHHVVD 65

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +++  SV +L DF    FG+LDI+ NNA  +     +         +T+   +  W    
Sbjct: 66  LTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADML---------VTQMTVD-VWDDT- 114

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                  V   +      K      IP L  +    +VN+SS                  
Sbjct: 115 -----FTV-NARGTMLMCK----YAIPRLISAGGGAIVNISSAT---------------- 148

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                    A       S+AY  +KA I   TR +A +Y +   
Sbjct: 149 ----------------------AHAAYDM----STAYACTKAAIETLTRYVATQYGRHGV 182

Query: 245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             N + PG V+T            E       + +       GR 
Sbjct: 183 RCNAIAPGLVRTPRL---------EVGLPQPIVDIFATHHLAGRI 218

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  107 bits (271), Expect = 4e-28
 Identities = 49/254 (19%), Positives = 86/254 (33%), Gaps = 73/254 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+V+G  +G+G   VR + ++G  VV     ++ G     +L  +        +  LD
Sbjct: 8   KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAA------RYVHLD 61

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++  A   +  D   T FG L +L NNAGI ++             I       +W ++ 
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG-----------TIEDYALT-EWQRI- 108

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                L V  L   + G +    A++  ++ +    ++N+SS              + G 
Sbjct: 109 -----LDV-NLTGVFLGIR----AVVKPMKEAGRGSIINISSIE-----------GLAGT 147

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                               Y  +K  +   T+  A        
Sbjct: 148 -------------------------------VACHGYTATKFAVRGLTKSTALELGPSGI 176

Query: 245 CVNCVCPGFVKTDI 258
            VN + PG VKT +
Sbjct: 177 RVNSIHPGLVKTPM 190

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  108 bits (271), Expect = 5e-28
 Identities = 55/271 (20%), Positives = 88/271 (32%), Gaps = 76/271 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A+ TG+ +GIG     +L  +G +VV+      K   E V +LK  G     +   Q 
Sbjct: 22  KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAI---QA 78

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           DIS  + V +L D   + FG LD + +N+G+     +++              +  + KV
Sbjct: 79  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEV------------TQELFDKV 126

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                         N  G     +  +         R++  SS                 
Sbjct: 127 -----------FNLNTRGQFFVAQQGLKHCR--RGGRIILTSSIA--------------- 158

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK----RY 241
                                     A     P+ + Y  SKA +  + R  A     + 
Sbjct: 159 --------------------------AVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAK- 191

Query: 242 PKFCVNCVCPGFVKTDINFHAGILSVEEGAE 272
               VNC+ PG VKTD+           G +
Sbjct: 192 -GVTVNCIAPGGVKTDMFDENSWHYAPGGYK 221

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  107 bits (270), Expect = 6e-28
 Identities = 47/296 (15%), Positives = 90/296 (30%), Gaps = 88/296 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT---ARDEKRGLEAVEKLKASGVDP 57
             +   K  V+ G  K +G  T +  A + + +VL    A+D     +  ++L+  G   
Sbjct: 6   YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKV 65

Query: 58  ELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGD 117
            L    Q D+S+   V+ L DF + +FGK+DI  N  G    K  ++         +   
Sbjct: 66  ALY---QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVE--------TS--- 111

Query: 118 AEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
            E ++  +              N        +     +    +  ++ +++ +       
Sbjct: 112 -EAEFDAM-----------DTINNKVAYFFIKQAAKHMN--PNGHIITIATSL------- 150

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
                                                      S Y  +KA +  YTR  
Sbjct: 151 -------------------------------LAAYT----GFYSTYAGNKAPVEHYTRAA 175

Query: 238 AK----RYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
           +K    +  +  VN + PG + T   +         G E+    A         + 
Sbjct: 176 SKELMKQ--QISVNAIAPGPMDTSFFY---------GQETKESTAFHKSQAMGNQL 220

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  108 bits (271), Expect = 6e-28
 Identities = 48/287 (16%), Positives = 92/287 (32%), Gaps = 81/287 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG   GIG  T    A  G  VV+   +E   +    ++ +           ++D
Sbjct: 28  RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKA------FGVRVD 81

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDAEVDWSK 124
           +S      S+ +    ++G++D+L NNAG  +      +               E  W +
Sbjct: 82  VSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIP--------------EETWDR 127

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           +      ++V  +K  +  +K     +IP++  +    ++N +S  +A            
Sbjct: 128 I------MSV-NVKGIFLCSK----YVIPVMRRNGGGSIINTTS-YTAT----------- 164

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                               +AY  SK  I++ TR +A  + K 
Sbjct: 165 -----------------------------SAI-ADRTAYVASKGAISSLTRAMAMDHAKE 194

Query: 245 --CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
              VN V PG + +            E  +     +         R 
Sbjct: 195 GIRVNAVAPGTIDSPYFTKI----FAEAKDPAKLRSDFNARAVMDRM 237

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  107 bits (270), Expect = 7e-28
 Identities = 53/258 (20%), Positives = 84/258 (32%), Gaps = 76/258 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K A VTG ++GIG    ++LA +G  V LT     +R    V +++ +G     +   + 
Sbjct: 32  KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAI---RA 88

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D  D  ++           G LDIL N+AGI       +                D+ +V
Sbjct: 89  DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEET------------TVADFDEV 136

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      +  N+        +      L D  R++ + S ++              
Sbjct: 137 -----------MAVNFRAPFVAIRSASRH--LGDGGRIITIGSNLA-------------- 169

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK----RY 241
                                    +      P  S Y  SKA +   T+ LA+    R 
Sbjct: 170 -----------------------ELVPW----PGISLYSASKAALAGLTKGLARDLGPR- 201

Query: 242 PKFCVNCVCPGFVKTDIN 259
               VN V PG   TD+N
Sbjct: 202 -GITVNIVHPGSTDTDMN 218

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  106 bits (268), Expect = 8e-28
 Identities = 33/266 (12%), Positives = 58/266 (21%), Gaps = 75/266 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
             A+VT +    G   V  L   G TVV          E      +  G           
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT---------- 51

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
                     L D        +D + +N  I                  +G +E D  ++
Sbjct: 52  IALAEQKPERLVDATLQHGEAIDTIVSNDYIPR---------PMNRLPLEGTSEADIRQM 102

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                       +          ++ I  L  +    ++ ++S V               
Sbjct: 103 -----------FEALSIFPILLLQSAIAPLRAAGGASVIFITSSV--------------- 136

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                  G+         +  Y  ++A   A     AK   +  
Sbjct: 137 -----------------------GKKPLAY----NPLYGPARAATVALVESAAKTLSRDG 169

Query: 245 -CVNCVCPGFVKTDINFHAGILSVEE 269
             +  + P F      F         
Sbjct: 170 ILLYAIGPNFFNNPTYFPTSDWENNP 195

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  107 bits (269), Expect = 8e-28
 Identities = 50/294 (17%), Positives = 84/294 (28%), Gaps = 77/294 (26%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLA---SKGITVVLTARDEKRGLEAVEKLKASGVDPELLL 61
                V+TG+++G G     QLA   S G  ++++AR E    +  E+L A   D + ++
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK-VV 63

Query: 62  FHQLDISDLASVSSLADFIKTQFG----KLDILANNAGIASVKFDMDAFADSGYQITKGD 117
               D+   A V  L   ++        +  +L NNA              S   +   D
Sbjct: 64  LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLG--------DVSKGFLNVND 115

Query: 118 AEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP--RLVNLSSYVSALKD 175
              + +                N           +   + S      +VN+SS       
Sbjct: 116 LA-EVNNY-----------WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLC----- 158

Query: 176 LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTR 235
                                                 +GW      Y   KA  +   +
Sbjct: 159 ---------------------------------ALQPYKGW----GLYCAGKAARDMLYQ 181

Query: 236 ILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
           +LA   P   V    PG +  D+   A      E ++ P   + L      G  
Sbjct: 182 VLAAEEPSVRVLSYAPGPLDNDMQQLAR-----ETSKDPELRSKLQKLKSDGAL 230

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  107 bits (269), Expect = 1e-27
 Identities = 55/289 (19%), Positives = 95/289 (32%), Gaps = 82/289 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG+  G G    ++ A  G  VV+  RD+        ++  +       L    D
Sbjct: 10  KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAA------LAVAAD 63

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           IS  A V +  +   ++FGK+DIL NNAGI     + +                ++ ++ 
Sbjct: 64  ISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPE-----------EFDRI- 111

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLEL----SDSPRLVNLSSYVSALKDLPEKARA 182
                + V  ++  Y  T      LIP  +          ++N++S   A          
Sbjct: 112 -----VGVN-VRGVYLMTS----KLIPHFKENGAKGQECVILNVAS-TGAG--------- 151

Query: 183 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP 242
                                          R   P+ + Y  +K  + + T+ LA    
Sbjct: 152 -------------------------------RPR-PNLAWYNATKGWVVSVTKALAIELA 179

Query: 243 KF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
                V  + P   +T       +L+   G +S        D  P GR 
Sbjct: 180 PAKIRVVALNPVAGETP------LLTTFMGEDSEEIRKKFRDSIPMGRL 222

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  107 bits (269), Expect = 1e-27
 Identities = 58/293 (19%), Positives = 89/293 (30%), Gaps = 88/293 (30%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M     K A+VTG+  GIG   V  L + G  V +  R                      
Sbjct: 23  MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD-------------- 68

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDA 118
           L    D+ + A    L   +    G+LDI+ NNAG+ S     +                
Sbjct: 69  LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETT-------------- 114

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
           + DWS             L  N     + C A IPL+  +    +VN++S          
Sbjct: 115 DADWSLS-----------LGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCW-------- 155

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
                                         G     G     + Y ++KA + + T+ + 
Sbjct: 156 ------------------------------GLRPGPGH----ALYCLTKAALASLTQCMG 181

Query: 239 KRYPKF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             +      +N VCP  V T +         + G +    +A L    P GR 
Sbjct: 182 MDHAPQGIRINAVCPNEVNTPML---RTGFAKRGFDPDRAVAELGRTVPLGRI 231

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  107 bits (269), Expect = 1e-27
 Identities = 62/296 (20%), Positives = 93/296 (31%), Gaps = 78/296 (26%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPEL 59
                 K A+VTGS +GIG      L   G  VV+  A   K   + V ++KA G D   
Sbjct: 13  PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIA 72

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAE 119
           +   + DI  +  +  L D     FG LDI  +N+G+ S     D              E
Sbjct: 73  I---KADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDV------------TE 117

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK 179
            ++ +V              N  G           L   +  R+V  SS  S        
Sbjct: 118 EEFDRV-----------FSLNTRGQFFVAREAYRHLT--EGGRIVLTSSNTS-------- 156

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
                                         + +     P  S Y  SK  ++++ RI +K
Sbjct: 157 -----------------------------KDFSV----PKHSLYSGSKGAVDSFVRIFSK 183

Query: 240 ----RYPKFCVNCVCPGFVKTDINFHAGILSVEEGAE--SPVKLALLPDGGPTGRF 289
               +  K  VN V PG   TD+        +  G    +  +  +     P  R 
Sbjct: 184 DCGDK--KITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRN 237

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  106 bits (268), Expect = 1e-27
 Identities = 63/289 (21%), Positives = 98/289 (33%), Gaps = 82/289 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTG ++GIG    + L   G  V + ARD +   +   +L A G           D
Sbjct: 30  RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGD----CQAIPAD 85

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +S  A    LA  +     +LDIL NNAG +     ++++  S            W KV 
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAGTSWGA-ALESYPVS-----------GWEKV- 132

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP----RLVNLSSYVSALKDLPEKARA 182
                     ++ N        + L+PLL  S S     R++N+ S              
Sbjct: 133 ----------MQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVA------------ 170

Query: 183 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP 242
                                     G  A         AY  SKA ++  +R+LAK   
Sbjct: 171 --------------------------GISAMGEQAY---AYGPSKAALHQLSRMLAKELV 201

Query: 243 KF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
                VN + PG   + +     I +  +  E+           P GR+
Sbjct: 202 GEHINVNVIAPGRFPSRMT--RHIANDPQALEA------DSASIPMGRW 242

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  106 bits (267), Expect = 2e-27
 Identities = 52/261 (19%), Positives = 87/261 (33%), Gaps = 70/261 (26%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPEL 59
           +   T +  VV G+ + IG     + A +G  VVLT     +    AV +++  G     
Sbjct: 3   LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALA 62

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAE 119
           +   + D+++ A V +       +FG++  L + AG    +  +    ++          
Sbjct: 63  I---KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEA---------- 109

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK 179
             W +V           L  N      T +  +P   ++    +V  SS           
Sbjct: 110 -FWHQV-----------LDVNLTSLFLTAKTALPK--MAKGGAIVTFSSQA--------- 146

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
                                              G  P + AY  SK  +  +TR LAK
Sbjct: 147 --------------------------------GRDGGGPGALAYATSKGAVMTFTRGLAK 174

Query: 240 RY-PKFCVNCVCPGFVKTDIN 259
              PK  VN VCPG + T  +
Sbjct: 175 EVGPKIRVNAVCPGMISTTFH 195

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  106 bits (268), Expect = 2e-27
 Identities = 58/266 (21%), Positives = 84/266 (31%), Gaps = 82/266 (30%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M + + +  +VTG  KGIG       A  G  V + AR  +       +L   G     +
Sbjct: 36  MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGN--V 93

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA-- 118
           +  +LD+SD  S +  A  +   FG LD++  NAG                 I   +A  
Sbjct: 94  IGVRLDVSDPGSCADAARTVVDAFGALDVVCANAG-----------------IFP-EARL 135

Query: 119 ----EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK 174
                   S+V           L  N  GT  T +A +  L  S   R++  SS      
Sbjct: 136 DTMTPEQLSEV-----------LDVNVKGTVYTVQACLAPLTASGRGRVILTSSIT---- 180

Query: 175 DLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIA-NRGWCPHSSAYKVSKAVINAY 233
                                             G +    GW    S Y  SKA    +
Sbjct: 181 ----------------------------------GPVTGYPGW----SHYGASKAAQLGF 202

Query: 234 TRILAKRYPKF--CVNCVCPGFVKTD 257
            R  A         VN + PG + T+
Sbjct: 203 MRTAAIELAPRGVTVNAILPGNILTE 228

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  106 bits (266), Expect = 2e-27
 Identities = 56/291 (19%), Positives = 91/291 (31%), Gaps = 78/291 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT--ARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K A+VTG  +GIG     +LA+ G  + +    + E++  E ++ ++A+       +F  
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK---AVFVG 59

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDAEVDW 122
           LD++D A+  S  D    + G  D+L NNAGIA +K   ++               E D 
Sbjct: 60  LDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVT--------------EEDL 105

Query: 123 SKVCYQTYELAVECLKTNYYGTKQTC-EALIPLLELSDSPRLVNLSSYVSALKDLPEKAR 181
            ++              N +        A     EL    +++N +S             
Sbjct: 106 KQI-----------YSVNVFSVFFGIQAASRKFDELGVKGKIINAASIA----------- 143

Query: 182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 241
                                                  SAY  +K  +   T+  A+  
Sbjct: 144 ---------------------------AIQGFPI----LSAYSTTKFAVRGLTQAAAQEL 172

Query: 242 PKF--CVNCVCPGFVKTDINFH-AGILSVEEGAESPVKLALLPDGGPTGRF 289
                 VN   PG V T +       LS   G                GR 
Sbjct: 173 APKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRP 223

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  106 bits (266), Expect = 2e-27
 Identities = 62/289 (21%), Positives = 100/289 (34%), Gaps = 74/289 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV--EKLKASGVDPELLLFHQ 64
           K AVVTGS  GIG      LA++G  +VL    +   +E V        GV     L+  
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKV---LYDG 61

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            D+S   +V  L D    Q G++DIL NNAGI      ++ F               W  
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTA-LIEDFPTE-----------KWDA 109

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           +           L  N         A +P ++     R++N++S                
Sbjct: 110 I-----------LALNLSAVFHGTAAALPHMKKQGFGRIINIASAH-------------- 144

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                   G +A+     + SAY  +K  +  +T++ A      
Sbjct: 145 ------------------------GLVAS----ANKSAYVAAKHGVVGFTKVTALETAGQ 176

Query: 245 --CVNCVCPGFVKTDI--NFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
               N +CPG+V+T +     + +       +      LL +  P+ +F
Sbjct: 177 GITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQF 225

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  105 bits (265), Expect = 3e-27
 Identities = 55/295 (18%), Positives = 94/295 (31%), Gaps = 79/295 (26%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL--KASGVDPE 58
           M     K A++TGS +GIG         +G TV +   D +R  +A  ++   A  V   
Sbjct: 3   MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAV--- 59

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA 118
                Q+D++   S+ +         G LDIL NNA +  +   ++        IT    
Sbjct: 60  -----QMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVE--------IT---- 102

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLP 177
              + K+              N  GT  T +A    ++      +++N++S         
Sbjct: 103 RESYEKL-----------FAINVAGTLFTLQAAARQMIAQGRGGKIINMASQA------- 144

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
                                          G           + Y  +KA + + T+  
Sbjct: 145 -------------------------------GRRGEAL----VAIYCATKAAVISLTQSA 169

Query: 238 AKRYPKF--CVNCVCPGFVKTDINFH-AGILSVEEGAESPVKLALLPDGGPTGRF 289
                K    VN + PG V  +       + +  E      K  L+ +  P GR 
Sbjct: 170 GLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRM 224

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  105 bits (264), Expect = 4e-27
 Identities = 52/287 (18%), Positives = 94/287 (32%), Gaps = 79/287 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG + G+G     + A +G  VV+T R +++  EA  +++        +L  Q+D
Sbjct: 7   KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQ---ILTVQMD 63

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           + +   +  + + I  +FG++DIL NNA      F   A   S            W+ V 
Sbjct: 64  VRNTDDIQKMIEQIDEKFGRIDILINNAAGN---FICPAEDLS---------VNGWNSV- 110

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                     +     GT    +A+    +E      ++N+ +                 
Sbjct: 111 ----------INIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATY--------------- 145

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKF 244
                                     A     P       +KA + A T+ LA  +  K+
Sbjct: 146 -----------------------AWDAG----PGVIHSAAAKAGVLAMTKTLAVEWGRKY 178

Query: 245 --CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
              VN + PG ++            ++   S           P GR 
Sbjct: 179 GIRVNAIAPGPIERTGGA-------DKLWISEEMAKRTIQSVPLGRL 218

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  105 bits (265), Expect = 4e-27
 Identities = 59/294 (20%), Positives = 95/294 (32%), Gaps = 81/294 (27%)

Query: 1   MAEATK---KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDP 57
           MA  T+   K  VVTG  +GIG   VR   + G  VV+  +DE  G    ++L  +    
Sbjct: 1   MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGA---- 56

Query: 58  ELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGD 117
              +F   D++    V +L      +FG+LD + NNAG        +  +          
Sbjct: 57  ---VFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQ-------- 105

Query: 118 AEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
               + ++      L +  L   Y  TK      +P L  S    ++N+SS +       
Sbjct: 106 ---GFRQL------LEL-NLLGTYTLTK----LALPYLRKS-QGNVINISS-LVGA---- 145

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
                                                G    +  Y  +K  + A T+ L
Sbjct: 146 ------------------------------------IGQ-AQAVPYVATKGAVTAMTKAL 168

Query: 238 AKRYPKFC--VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
           A     +   VNC+ PG + T +             +    +       P GR 
Sbjct: 169 ALDESPYGVRVNCISPGNIWTPLWEEL----AALMPDPRASIREGMLAQPLGRM 218

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  104 bits (263), Expect = 5e-27
 Identities = 47/272 (17%), Positives = 79/272 (29%), Gaps = 84/272 (30%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-LKASGVDPEL 59
             +   K  ++TGS++GIG  T R  A  G  V L  R     ++     ++A G D   
Sbjct: 2   FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDA-- 59

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGD-- 117
             F   D++   +   L D    +FG +D+L NNAG                 +      
Sbjct: 60  -AFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGG----------------LVGRKPL 102

Query: 118 ---AEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL-----ELSDSPRLVNLSSY 169
               +  +  V           +  N      T +  +P L         +  +++  S 
Sbjct: 103 PEIDDTFYDAV-----------MDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSI 151

Query: 170 VSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAV 229
                                                  G        P +  Y  +KA 
Sbjct: 152 A--------------------------------------GHTGGG---PGAGLYGAAKAF 170

Query: 230 INAYTRILAKRYPKF--CVNCVCPGFVKTDIN 259
           ++   +     + K     N V PG V T  +
Sbjct: 171 LHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFH 202

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  104 bits (261), Expect = 7e-27
 Identities = 58/288 (20%), Positives = 83/288 (28%), Gaps = 88/288 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
              +VTG +KGIG   V  L       V+    ++                E L F + D
Sbjct: 5   ANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA------------ENLKFIKAD 52

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDAEVDWSK 124
           ++    ++++ D IK      D +  NAGI      FD+D                   K
Sbjct: 53  LTKQQDITNVLDIIK--NVSFDGIFLNAGILIKGSIFDID--------------IESIKK 96

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           V           L  N + +    + L   L+      +V   S                
Sbjct: 97  V-----------LDLNVWSSIYFIKGLENNLK--VGASIVFNGSDQ-------------- 129

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                     IA     P+S AY +SK  I   T+ LA    K+
Sbjct: 130 ------------------------CFIAK----PNSFAYTLSKGAIAQMTKSLALDLAKY 161

Query: 245 --CVNCVCPGFVKTDIN-FHAGILSVEEGAESPVKLALLPDGGPTGRF 289
              VN VCPG V TD+        +   G              P  R 
Sbjct: 162 QIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRI 209

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  104 bits (262), Expect = 8e-27
 Identities = 46/258 (17%), Positives = 77/258 (29%), Gaps = 81/258 (31%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +   +  GIG +T R+L  + +   +     +    A+ +LKA       + FH  D
Sbjct: 6   KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE-NPTALAELKAINPKVN-ITFHTYD 63

Query: 67  IS-DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           ++  +A    L   I  Q   +DIL N AGI      +D              +    + 
Sbjct: 64  VTVPVAESKKLLKKIFDQLKTVDILINGAGI------LD--------------DHQIERT 103

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR---LVNLSSYVSALKDLPEKARA 182
                      +  N+ G   T  A++   +         + N+ S              
Sbjct: 104 -----------IAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVT------------ 140

Query: 183 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP 242
                                     G  A          Y  SKA + ++T  LAK  P
Sbjct: 141 --------------------------GFNAI----HQVPVYSASKAAVVSFTNSLAKLAP 170

Query: 243 KF--CVNCVCPGFVKTDI 258
                   + PG  +T +
Sbjct: 171 ITGVTAYSINPGITRTPL 188

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  104 bits (263), Expect = 8e-27
 Identities = 55/265 (20%), Positives = 93/265 (35%), Gaps = 72/265 (27%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFH 63
                +VTG ++GIG    R  A +G  V +  A + +     V  +  SG +   +   
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAI--- 81

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWS 123
             D+ + A ++++   +  QFG+LD L NNAGI  V +          ++ +   E    
Sbjct: 82  PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGI--VDYPQ--------RVDEMSVE-RIE 130

Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP---RLVNLSSYVSALKDLPEKA 180
           ++           L+ N  G+       +  +    S     +VN+SS  + L       
Sbjct: 131 RM-----------LRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAIL------- 172

Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                                             G       Y  SKA I+ +T  LA+ 
Sbjct: 173 ----------------------------------GSATQYVDYAASKAAIDTFTIGLARE 198

Query: 241 YP--KFCVNCVCPGFVKTDINFHAG 263
                  VN V PG ++TD++   G
Sbjct: 199 VAAEGIRVNAVRPGIIETDLHASGG 223

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  104 bits (261), Expect = 9e-27
 Identities = 34/259 (13%), Positives = 59/259 (22%), Gaps = 85/259 (32%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             K  +V G +  +G E V+   SK    +     E               +P       
Sbjct: 21  MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRE---------------NPNADHSFT 65

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           +  S    + S+ + I ++  K+D     AG  S           G   +    +     
Sbjct: 66  IKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWS----------GGNASSDEFLK-SVKG 114

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           +           +  N Y    +      LL        V   +             A+ 
Sbjct: 115 M-----------IDMNLYSAFASAHIGAKLLN--QGGLFVLTGASA-----------ALN 150

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                                AY  +KA  +   + LA      
Sbjct: 151 RT-------------------------------SGMIAYGATKAATHHIIKDLASENGGL 179

Query: 245 C----VNCVCPGFVKTDIN 259
                   + P  + T  N
Sbjct: 180 PAGSTSLGILPVTLDTPTN 198

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  103 bits (260), Expect = 1e-26
 Identities = 61/302 (20%), Positives = 93/302 (30%), Gaps = 83/302 (27%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKG-------ITVVLTARDEKRGLEAVEKLKASGVDPE 58
           K   ++TG+ KGIG     + A            +VL++R      +   + +A G    
Sbjct: 2   KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL-- 59

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA 118
                  DISD+A V  L   I  ++G +D L NNAG+                ++    
Sbjct: 60  -TDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGA-----------LSDLTE 107

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
           E D+              + TN  GT    +AL  L+E   S  +  ++S          
Sbjct: 108 E-DFDYT-----------MNTNLKGTFFLTQALFALMERQHSGHIFFITSVA-------- 147

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
                                            A      HSS Y +SK         + 
Sbjct: 148 ------------------------------ATKAF----RHSSIYCMSKFGQRGLVETMR 173

Query: 239 KRYPKF--CVNCVCPGFVKTDINFH------AGILSVEEGAESPVKLALLPDGGPTGRFF 290
               K    +  V PG V T +         A ++  E+ A   V+  L P         
Sbjct: 174 LYARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAYLQPSRTVVEEII 233

Query: 291 LR 292
           LR
Sbjct: 234 LR 235

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  104 bits (261), Expect = 1e-26
 Identities = 61/296 (20%), Positives = 102/296 (34%), Gaps = 91/296 (30%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFH 63
             K A+VTG+++GIG    ++LA+ G  V +     ++   E V +++++G     +   
Sbjct: 6   KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSI--- 62

Query: 64  QLDISDLASVSSLADFIKTQF------GKLDILANNAGIASVKFDMDAFADSGYQITKGD 117
             ++  L  V +L   +  +        K DIL NNAGI    F  +             
Sbjct: 63  GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEET------------ 110

Query: 118 AEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
            E  + ++           +  N        +  +  L   D+ R++N+SS         
Sbjct: 111 TEQFFDRM-----------VSVNAKAPFFIIQQALSRLR--DNSRIINISSAA------- 150

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
                                            I+     P   AY ++K  IN  T  L
Sbjct: 151 -------------------------------TRISL----PDFIAYSMTKGAINTMTFTL 175

Query: 238 AK----RYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
           AK    R     VN + PGFVKTD   +A +LS     +    ++         R 
Sbjct: 176 AKQLGAR--GITVNAILPGFVKTD--MNAELLSDPMMKQYATTIS------AFNRL 221

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  104 bits (261), Expect = 1e-26
 Identities = 35/285 (12%), Positives = 78/285 (27%), Gaps = 77/285 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A+VT      G  +  +L+  G TV       K   + +E    +          QL 
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFK-QKDELEAFAETYP--------QLK 52

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
                  + L + + + +G++D+L +N   A     +D +A             D+    
Sbjct: 53  PMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVE-----------DYRGA- 100

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     ++           A+   ++   S  ++ ++S                  
Sbjct: 101 ----------VEALQIRPFALVNAVASQMKKRKSGHIIFITSAT---------------- 134

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                      +      S Y  ++A        L+K   ++  
Sbjct: 135 ----------------------PFGPWKE----LSTYTSARAGACTLANALSKELGEYNI 168

Query: 245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
            V  + P ++ ++ +        E    +P  +A +       R 
Sbjct: 169 PVFAIGPNYLHSEDS--PYFYPTEPWKTNPEHVAHVKKVTALQRL 211

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  104 bits (261), Expect = 1e-26
 Identities = 60/290 (20%), Positives = 89/290 (30%), Gaps = 83/290 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+ +GIG      L  KG  V L   + + G++    L       +  LF Q D
Sbjct: 8   KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQK-TLFIQCD 66

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++D   +      +   FG+LDIL NNAG+ +                    E +W K  
Sbjct: 67  VADQQQLRDTFRKVVDHFGRLDILVNNAGVNN--------------------EKNWEKT- 105

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL---VNLSSYVSALKDLPEKARAV 183
                L +  L +   GT       +  +   +       +N+SS               
Sbjct: 106 -----LQI-NLVSVISGTY----LGLDYMSKQNGGEGGIIINMSSLA------------- 142

Query: 184 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTR--ILAKRY 241
                                    G +           Y  SK  I  +TR   LA   
Sbjct: 143 -------------------------GLMPVAQ----QPVYCASKHGIVGFTRSAALAANL 173

Query: 242 PKF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
                 +N +CPGFV T I     I   E   +       + D       
Sbjct: 174 MNSGVRLNAICPGFVNTAIL--ESIEKEENMGQYIEYKDHIKDMIKYYGI 221

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  103 bits (258), Expect = 3e-26
 Identities = 45/254 (17%), Positives = 74/254 (29%), Gaps = 65/254 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  VVTG+++GIG     QL   G TV +T R         ++ ++ G      +    D
Sbjct: 6   QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQC---VPVVCD 62

Query: 67  ISDLASVSSLADFI-KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
            S  + V SL + + + Q G+LD+L NNA                    +  A   W  +
Sbjct: 63  SSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNK----AFWETPAS-MWDDI 117

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                            G          L+  +    +V +SS  S              
Sbjct: 118 -----------NNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGS-------------- 152

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                    +        +  Y V KA  +      A    +  
Sbjct: 153 -------------------------LQYMF----NVPYGVGKAACDKLAADCAHELRRHG 183

Query: 245 -CVNCVCPGFVKTD 257
                + PG V+T+
Sbjct: 184 VSCVSLWPGIVQTE 197

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  102 bits (257), Expect = 3e-26
 Identities = 37/281 (13%), Positives = 78/281 (27%), Gaps = 72/281 (25%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
                 V G+   IG E  ++ A++G TV    R+ ++    V +++A+G     ++   
Sbjct: 6   RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGR---IVARS 62

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           LD  +   V++  +        L++   N G                 I +      + K
Sbjct: 63  LDARNEDEVTAFLNAAD-AHAPLEVTIFNVGANVNF-----------PILETTDR-VFRK 109

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           V            +   +    +      L+      ++    +  S             
Sbjct: 110 V-----------WEMACWAGFVSGRESARLMLAHGQGKIFFTGATASL------------ 146

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PK 243
                                        RG     +A+  +K  + A  + +A+   PK
Sbjct: 147 -----------------------------RGG-SGFAAFASAKFGLRAVAQSMARELMPK 176

Query: 244 --FCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPD 282
                + +    V T            + A +   L + P 
Sbjct: 177 NIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDLLMPPA 217

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  102 bits (257), Expect = 5e-26
 Identities = 56/271 (20%), Positives = 85/271 (31%), Gaps = 85/271 (31%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
                   A+VTG+  GIG     +LA +G TV     D     E V  L   G      
Sbjct: 2   QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPP 61

Query: 61  ----LFHQLDISDLASVSSLADFIKTQFGK-LDILANNAGIASVKFDMDAFADSGYQITK 115
                  Q D+S+  +   L + ++  F +   ++ + AG                 IT+
Sbjct: 62  RGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAG-----------------ITQ 104

Query: 116 GDA------EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALI-PLLELSDSPRLVNLSS 168
            D       E DW KV           +  N  GT    +A    L+       ++N+SS
Sbjct: 105 -DEFLLHMSEDDWDKV-----------IAVNLKGTFLVTQAAAQALVSNGCRGSIINISS 152

Query: 169 YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKA 228
            V                                      G++ N G     + Y  SKA
Sbjct: 153 IV--------------------------------------GKVGNVG----QTNYAASKA 170

Query: 229 VINAYTRILAKRYPKF--CVNCVCPGFVKTD 257
            +   T+  A+   +     N V PGF+ T 
Sbjct: 171 GVIGLTQTAARELGRHGIRCNSVLPGFIATP 201

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  101 bits (255), Expect = 7e-26
 Identities = 52/285 (18%), Positives = 89/285 (31%), Gaps = 82/285 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++T + +GIG       A +G  V+ T  +E +  E  +                LD
Sbjct: 7   KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQ--------TRVLD 58

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++    +   A+    +  +LD+L N AG       +D              E DW    
Sbjct: 59  VTKKKQIDQFAN----EVERLDVLFNVAGFVHHGTVLDC------------EEKDWDFS- 101

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                + +  +++ Y   K    A +P +    S  ++N+SS  S++K            
Sbjct: 102 -----MNLN-VRSMYLMIK----AFLPKMLAQKSGNIINMSSVASSVK------------ 139

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                         C     Y  +KA +   T+ +A  + +   
Sbjct: 140 -------------------------GVVNRC----VYSTTKAAVIGLTKSVAADFIQQGI 170

Query: 245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             NCVCPG V T          ++                 TGRF
Sbjct: 171 RCNCVCPGTVDTPSLQER----IQARGNPEEARNDFLKRQKTGRF 211

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  102 bits (257), Expect = 7e-26
 Identities = 59/265 (22%), Positives = 94/265 (35%), Gaps = 82/265 (30%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
                 K A+VTG+ +GIG E  + LA     V+  +R +K     V+++K+ G +    
Sbjct: 39  YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGY 98

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA-- 118
                D+S    +S + + I T+   +DIL NNAG                 IT+ D   
Sbjct: 99  ---AGDVSKKEEISEVINKILTEHKNVDILVNNAG-----------------ITR-DNLF 137

Query: 119 ----EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK 174
                 +W  V           L+TN        + +   +  +   R++N+SS V    
Sbjct: 138 LRMKNDEWEDV-----------LRTNLNSLFYITQPISKRMINNRYGRIINISSIV---- 182

Query: 175 DLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT 234
                                             G   N G     + Y  SKA +  +T
Sbjct: 183 ----------------------------------GLTGNVG----QANYSSSKAGVIGFT 204

Query: 235 RILAKRYPK--FCVNCVCPGFVKTD 257
           + LAK        VN + PGF+ +D
Sbjct: 205 KSLAKELASRNITVNAIAPGFISSD 229

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  101 bits (254), Expect = 8e-26
 Identities = 56/261 (21%), Positives = 85/261 (32%), Gaps = 88/261 (33%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             K  ++TG+  GIG  T+   A +G  +V    +E    EA E + A  V         
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPV--------V 55

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA------ 118
           +D++D ASV           G+LD + + AG                 IT+ D       
Sbjct: 56  MDVADPASVERGFAEALAHLGRLDGVVHYAG-----------------ITR-DNFHWKMP 97

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
             DW  V           L+ N  G+    +A    +   +   +V  +S V        
Sbjct: 98  LEDWELV-----------LRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY------- 139

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
                LG                           N G     + Y  S A +   TR LA
Sbjct: 140 -----LG---------------------------NLG----QANYAASMAGVVGLTRTLA 163

Query: 239 KRYPKF--CVNCVCPGFVKTD 257
               ++   VN + PGF++T 
Sbjct: 164 LELGRWGIRVNTLAPGFIETR 184

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  101 bits (254), Expect = 1e-25
 Identities = 53/262 (20%), Positives = 90/262 (34%), Gaps = 80/262 (30%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M   + K  +VTG+  GIG   +   A +G ++V   R+E+   EAV  L+A        
Sbjct: 1   MGRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEA------ 54

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIA--SVKFDMDAFADSGYQITKGDA 118
           +    D+SD  +V ++      +FG+L  +A+ AG+A  ++ +++               
Sbjct: 55  IAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLP-------------- 100

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
              W KV           L+ N  G+         +LE  +   LV   S          
Sbjct: 101 LEAWEKV-----------LRVNLTGSFLVARKAGEVLE--EGGSLVLTGS---------- 137

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
               V G                         +   G     + Y   K  +    R LA
Sbjct: 138 ----VAG-------------------------LGAFG----LAHYAAGKLGVVGLARTLA 164

Query: 239 KRYPKF--CVNCVCPGFVKTDI 258
               +    VN + PG ++T +
Sbjct: 165 LELARKGVRVNVLLPGLIQTPM 186

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  101 bits (254), Expect = 2e-25
 Identities = 49/279 (17%), Positives = 85/279 (30%), Gaps = 69/279 (24%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG   GIG  T +     G  VV+    +  G +    + +  V    + F   D
Sbjct: 17  KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV----ISFVHCD 72

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++    V +L D    + GKLDI+  N G+ S          + Y I +   E D+ +V 
Sbjct: 73  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLS---------TTPYSILEAGNE-DFKRV- 121

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                + +  +   +   K        ++  +    +V  +S +S+              
Sbjct: 122 -----MDIN-VYGAFLVAK----HAARVMIPAKKGSIVFTAS-ISSF------------- 157

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                            S  Y  +K  +   T  L     ++  
Sbjct: 158 ---------------------------TAGEGVSHVYTATKHAVLGLTTSLCTELGEYGI 190

Query: 245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG 283
            VNCV P  V + +             E     A    G
Sbjct: 191 RVNCVSPYIVASPL-LTDVFGVDSSRVEELAHQAANLKG 228

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  100 bits (252), Expect = 2e-25
 Identities = 55/287 (19%), Positives = 97/287 (33%), Gaps = 81/287 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG   G+G E V+ L  +G  V  +  +E  G +   +L          +F + D
Sbjct: 7   KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERS------MFVRHD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +S  A  + +   ++ + G L++L NNAGI                +  G  E D+S++ 
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPG-----------DMETGRLE-DFSRL- 107

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                L +   ++ + G +      I  +       ++N++S VS+              
Sbjct: 108 -----LKIN-TESVFIGCQ----QGIAAM-KETGGSIINMAS-VSSW------------- 142

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC- 245
                                             + Y  SKA ++A TR  A    K   
Sbjct: 143 ---------------------------LPI-EQYAGYSASKAAVSALTRAAALSCRKQGY 174

Query: 246 ---VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
              VN + P  + T +     + +      S   +   P     GR 
Sbjct: 175 AIRVNSIHPDGIYTPM-----MQASLPKGVSKEMVLHDPKLNRAGRA 216

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  100 bits (251), Expect = 2e-25
 Identities = 55/258 (21%), Positives = 87/258 (33%), Gaps = 82/258 (31%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL--KASGVDPELLLFHQ 64
           K A+VTG+ +GIG     +LA+ G TV+++  + +    A   +  KA  +         
Sbjct: 7   KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAI--------A 58

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDAEVDW 122
            DISD  SV +L   I+   G +DIL NNA I       D+D                 W
Sbjct: 59  ADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVD--------------LDHW 104

Query: 123 SKVCYQTYELAVECLKTNYYGTKQTCEALIPL-LELSDSPRLVNLSSYVSALKDLPEKAR 181
            K+           +  N  GT     A          + R+++++S             
Sbjct: 105 RKI-----------IDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNT----------- 142

Query: 182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 241
                                                  +AY  +K  +  +TR LA   
Sbjct: 143 ---------------------------FFAGTPN----MAAYVAAKGGVIGFTRALATEL 171

Query: 242 PKF--CVNCVCPGFVKTD 257
            K+    N V PG +++D
Sbjct: 172 GKYNITANAVTPGLIESD 189

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  100 bits (252), Expect = 3e-25
 Identities = 55/258 (21%), Positives = 89/258 (34%), Gaps = 71/258 (27%)

Query: 7   KYAVVTGS--NKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKL-KASGVDPELLLF 62
           K  VVTG+   KG+G E  R  A  G  V +T A   +   E V++L K  G+       
Sbjct: 21  KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIK---AKA 77

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDW 122
           ++  +    S   L   +   FG++D    NAG  +    +D             +   W
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDG------------SVEAW 125

Query: 123 SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA 182
           + V           ++ +  GT    +A+    +   +  LV  +S              
Sbjct: 126 NHV-----------VQVDLNGTFHCAKAVGHHFKERGTGSLVITAS-------------- 160

Query: 183 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP 242
                         M           G IAN       ++Y V+KA      R LA  + 
Sbjct: 161 --------------MS----------GHIANFP--QEQTSYNVAKAGCIHMARSLANEWR 194

Query: 243 KF-CVNCVCPGFVKTDIN 259
            F  VN + PG++ T ++
Sbjct: 195 DFARVNSISPGYIDTGLS 212

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  100 bits (251), Expect = 3e-25
 Identities = 42/262 (16%), Positives = 86/262 (32%), Gaps = 79/262 (30%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFH 63
             ++A++T   KG+G +   +L +KG +V +T   D        E  K        L F 
Sbjct: 6   FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEER---LQFV 62

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA----- 118
           Q D++    +  + +   + FGK+D L NNA               G  + +        
Sbjct: 63  QADVTKKEDLHKIVEEAMSHFGKIDFLINNA---------------GPYVFE-RKKLVDY 106

Query: 119 -EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
            E +W+++           ++ N        + ++P++   +  R++N            
Sbjct: 107 EEDEWNEM-----------IQGNLTAVFHLLKLVVPVMRKQNFGRIINYGF-QG------ 148

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
                                                    + SA+  +K  + + T+ +
Sbjct: 149 --------------------AD---------SAPGW----IYRSAFAAAKVGLVSLTKTV 175

Query: 238 AKRYPKF--CVNCVCPGFVKTD 257
           A    ++    N VCPG +  +
Sbjct: 176 AYEEAEYGITANMVCPGDIIGE 197

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  100 bits (251), Expect = 3e-25
 Identities = 61/285 (21%), Positives = 95/285 (33%), Gaps = 79/285 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A VTG+  GIG E  R  A+ G  ++L  R+      A ++L A+            D
Sbjct: 12  ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVA-----ARIVAD 66

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++D  ++++ A   +     + IL N+AGIA +  D     D+            W +V 
Sbjct: 67  VTDAEAMTAAAAEAE-AVAPVSILVNSAGIARLH-DALETDDA-----------TWRQV- 112

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     +  N  G      A    +    +  +VNL S                  
Sbjct: 113 ----------MAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMS---------------- 146

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                 G I NR     +S+Y  SK  ++  TR LA  +     
Sbjct: 147 ----------------------GTIVNRPQ--FASSYMASKGAVHQLTRALAAEWAGRGV 182

Query: 245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
            VN + PG+V T++          +  E P       D  P GR 
Sbjct: 183 RVNALAPGYVATEMT--------LKMRERPELFETWLDMTPMGRC 219

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  100 bits (251), Expect = 3e-25
 Identities = 61/265 (23%), Positives = 97/265 (36%), Gaps = 82/265 (30%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
                K+ A+VTG+++GIG     +LA +G  V+ TA  E          K +G++    
Sbjct: 23  DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGA 82

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA-- 118
               L+++D  +V +L +    +FG L++L NNAG                 IT+ D   
Sbjct: 83  ---VLNVNDATAVDALVESTLKEFGALNVLVNNAG-----------------ITQ-DQLA 121

Query: 119 ----EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK 174
               + +W  V           + TN     +   A++  +  +   R+VN++S V    
Sbjct: 122 MRMKDDEWDAV-----------IDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVV---- 166

Query: 175 DLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT 234
                                             G   N G       Y  +KA +   T
Sbjct: 167 ----------------------------------GSAGNPG----QVNYAAAKAGVAGMT 188

Query: 235 RILAKRYPK--FCVNCVCPGFVKTD 257
           R LA+        VNCV PGF+ TD
Sbjct: 189 RALAREIGSRGITVNCVAPGFIDTD 213

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  101 bits (253), Expect = 5e-25
 Identities = 53/300 (17%), Positives = 93/300 (31%), Gaps = 81/300 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG-------LEAVEKLKASGVDPEL 59
               +TG+++GIG     + A  G  +V+ A+  +           A E+++A G     
Sbjct: 46  CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKA-- 103

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAE 119
            L   +D+ D   +S+  +    +FG +DIL NNA   S+   +D               
Sbjct: 104 -LPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDT------------PT 150

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK 179
                +           +  N  GT    +A IP L+ S    ++N+S            
Sbjct: 151 KRLDLM-----------MNVNTRGTYLASKACIPYLKKSKVAHILNISP----------- 188

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
               L                               W     AY ++K  ++ Y   +A+
Sbjct: 189 ---PLNLNPV--------------------------WFKQHCAYTIAKYGMSMYVLGMAE 219

Query: 240 RY-PKFCVNCVCPG-FVKTDINFHAGILSVEEGAESP------VKLALLPDGGPTGRFFL 291
            +  +  VN + P   + T      G   +E                       TG F +
Sbjct: 220 EFKGEIAVNALWPKTAIHTAAMDMLGGPGIESQCRKVDIIADAAYSIFQKPKSFTGNFVI 279

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 98.7 bits (247), Expect = 9e-25
 Identities = 48/286 (16%), Positives = 89/286 (31%), Gaps = 87/286 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG+ KGIG  TV+ L + G  VV  +R +      V +          +    +D
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-------IEPVCVD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           + D  +            G +D+L NNA +A ++  ++              +  + +  
Sbjct: 61  LGDWEATERALG----SVGPVDLLVNNAAVALLQPFLEV------------TKEAFDRS- 103

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      + N     Q  + +   L+       +VN+SS                 
Sbjct: 104 ----------FEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQC--------------- 138

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                   + A      + S Y  +K  ++  T+++A       
Sbjct: 139 -----------------------SQRAV----TNHSVYCSTKGALDMLTKVMALELGPHK 171

Query: 245 -CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             VN V P  V T +         +     P K   + +  P G+F
Sbjct: 172 IRVNAVNPTVVMTSMG--------QATWSDPHKAKTMLNRIPLGKF 209

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 98.8 bits (247), Expect = 1e-24
 Identities = 46/286 (16%), Positives = 83/286 (29%), Gaps = 70/286 (24%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K AVVT  + G+GF +  +LA  G  ++L +R+ ++   A  ++ +     + +     D
Sbjct: 8   KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQ-VDIVAGD 66

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           I +   +  L +  +   G  DIL  + G       M+   +            DW +  
Sbjct: 67  IREPGDIDRLFEKAR-DLGGADILVYSTGGPRPGRFMELGVE------------DWDES- 112

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                      +                +      R+V + S V+ L+   + A      
Sbjct: 113 ----------YRLLARSAVWVGRRAAEQMVEKGWGRMVYIGS-VTLLRPWQDLA------ 155

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                                 + +  +    R LA        
Sbjct: 156 -----------------------------------LSNIMRLPVIGVVRTLALELAPHGV 180

Query: 245 CVNCVCPGFVKTD-INFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
            VN V P  + TD +   A   +   G      L  +    P GR 
Sbjct: 181 TVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRV 226

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 98.3 bits (246), Expect = 1e-24
 Identities = 64/261 (24%), Positives = 96/261 (36%), Gaps = 82/261 (31%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            +K A+VTG+++GIGFE    LASKG TVV TA  +    +    +K  G     L    
Sbjct: 4   NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGL---V 60

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA------ 118
           L+ISD+ S+ +    IK +   +DIL NNAG                 IT+ D       
Sbjct: 61  LNISDIESIQNFFAEIKAENLAIDILVNNAG-----------------ITR-DNLMMRMS 102

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
           E +W  V           + TN     +  +  +  +      R++++ S V        
Sbjct: 103 EDEWQSV-----------INTNLSSIFRMSKECVRGMMKKRWGRIISIGSVV-------- 143

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
                                         G   N G     + Y  +KA +  +++ LA
Sbjct: 144 ------------------------------GSAGNPG----QTNYCAAKAGVIGFSKSLA 169

Query: 239 KRYPK--FCVNCVCPGFVKTD 257
                    VN V PGF+ TD
Sbjct: 170 YEVASRNITVNVVAPGFIATD 190

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 99.3 bits (248), Expect = 2e-24
 Identities = 57/287 (19%), Positives = 93/287 (32%), Gaps = 76/287 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPE--LLLFHQ 64
           + A+VTG   GIG   V++L   G  VV+ +R  +R   A ++L+A+    +   ++  Q
Sbjct: 19  QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQ 78

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            +I +   V++L       FGK++ L NN G     F   A   S            W  
Sbjct: 79  CNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQ---FLSPAEHIS---------SKGWHA 126

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           V           L+TN  GT   C+A+           +VN+                  
Sbjct: 127 V-----------LETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP--------------- 160

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                    +        HS A   ++A +   T+ LA  +   
Sbjct: 161 ------------------------TKAGFPLAV-HSGA---ARAGVYNLTKSLALEWACS 192

Query: 245 --CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
              +NCV PG + +           +   E   +        P  R 
Sbjct: 193 GIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI------PAKRI 233

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 97.6 bits (244), Expect = 2e-24
 Identities = 46/286 (16%), Positives = 86/286 (30%), Gaps = 87/286 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A+VTG+ KGIG +TV+ L + G  VV   R     +   ++          +    +D
Sbjct: 8   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG-------IEPVCVD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           + D  +            G +D+L NNA +  ++  ++              +  + +  
Sbjct: 61  LGDWDATEKALG----GIGPVDLLVNNAALVIMQPFLEV------------TKEAFDRS- 103

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                        N     Q  + +   ++       +VN+SS V               
Sbjct: 104 ----------FSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMV--------------- 138

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                    +      P+   Y  +K  +   T+ +A       
Sbjct: 139 -----------------------AHVTF----PNLITYSSTKGAMTMLTKAMAMELGPHK 171

Query: 245 -CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             VN V P  V TD+         ++ +  P     L +  P  +F
Sbjct: 172 IRVNSVNPTVVLTDMG--------KKVSADPEFARKLKERHPLRKF 209

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 97.5 bits (244), Expect = 2e-24
 Identities = 60/262 (22%), Positives = 97/262 (37%), Gaps = 83/262 (31%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-LKASGVDPELLLFH 63
             K A+VTGS++G+G     +L + G  +VL        L+A  +  KA+G++  +    
Sbjct: 4   KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVA--- 60

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA----- 118
           + D+ +   V ++       FG++DIL NNAG                 IT+ D      
Sbjct: 61  KGDVKNPEDVENMVKTAMDAFGRIDILVNNAG-----------------ITR-DTLMLKM 102

Query: 119 -EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
            E DW  V           L TN        +A+  ++    S +++N++S         
Sbjct: 103 SEKDWDDV-----------LNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIA------- 144

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
                                          G I N G     + Y  SKA +  +T+ +
Sbjct: 145 -------------------------------GIIGNAG----QANYAASKAGLIGFTKSI 169

Query: 238 AKRYPK--FCVNCVCPGFVKTD 257
           AK +       N V PG +KTD
Sbjct: 170 AKEFAAKGIYCNAVAPGIIKTD 191

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 97.2 bits (243), Expect = 4e-24
 Identities = 41/253 (16%), Positives = 65/253 (25%), Gaps = 80/253 (31%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K   VTG+ KGIG+ T       G  V    +   +                      +D
Sbjct: 8   KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFA-------------TEVMD 54

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++D A V+ +   +  +  +LD L N AGI  +                  ++ DW +  
Sbjct: 55  VADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQL------------SKEDWQQT- 101

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                        N  G     +  +          +V ++S                  
Sbjct: 102 ----------FAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDA---------------- 135

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                       G     SAY  SKA + +    +         
Sbjct: 136 ----------------------AHTPRIGM----SAYGASKAALKSLALSVGLELAGSGV 169

Query: 245 CVNCVCPGFVKTD 257
             N V PG   TD
Sbjct: 170 RCNVVSPGSTDTD 182

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 96.9 bits (242), Expect = 7e-24
 Identities = 45/265 (16%), Positives = 75/265 (28%), Gaps = 68/265 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQL 65
             AV+TG  + IG     +L  +G  VV+     E      V +L A+     +L   + 
Sbjct: 12  PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLC--KG 69

Query: 66  DISDLASVSS----LADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVD 121
           D+S  +S+      + D     FG+ D+L NNA        +     +G    K      
Sbjct: 70  DLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDA-Q 128

Query: 122 WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP-----RLVNLSSYVSALKDL 176
            +++             +N         A         +       +VNL   +      
Sbjct: 129 VAEL-----------FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM------ 171

Query: 177 PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI 236
                                            ++      P    Y ++K  +   TR 
Sbjct: 172 --------------------------------TDLPL----PGFCVYTMAKHALGGLTRA 195

Query: 237 LAKRY-PK-FCVNCVCPGFVKTDIN 259
            A    P+   VN V PG       
Sbjct: 196 AALELAPRHIRVNAVAPGLSLLPPA 220

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 96.9 bits (242), Expect = 7e-24
 Identities = 62/266 (23%), Positives = 97/266 (36%), Gaps = 83/266 (31%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPEL 59
               T + A+VTG+++GIG     +LA+ G  V +  A       E V  + A+G +   
Sbjct: 23  ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFA 82

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA- 118
           +   + D+S  + V +L   +  ++G+LD+L NNAG                 IT+ D  
Sbjct: 83  V---KADVSQESEVEALFAAVIERWGRLDVLVNNAG-----------------ITR-DTL 121

Query: 119 -----EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSAL 173
                  DW  V           L  N  G      A   ++    S R++N++S V   
Sbjct: 122 LLRMKRDDWQSV-----------LDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVV--- 167

Query: 174 KDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAY 233
                                              GE+ N G     + Y  +KA +   
Sbjct: 168 -----------------------------------GEMGNPG----QANYSAAKAGVIGL 188

Query: 234 TRILAKRYPK--FCVNCVCPGFVKTD 257
           T+ +AK        VN V PGF+ TD
Sbjct: 189 TKTVAKELASRGITVNAVAPGFIATD 214

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 97.3 bits (243), Expect = 8e-24
 Identities = 54/305 (17%), Positives = 96/305 (31%), Gaps = 76/305 (24%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT------------ARDEKRGLEAVEKLKASG 54
           K  +VTG  +G G     +LA +G  ++L                 +   EA  +++ +G
Sbjct: 11  KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG 70

Query: 55  VDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQIT 114
                    ++D+ D A+VS        +FGKLD++  NAGI  +   +           
Sbjct: 71  RK---AYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLP---------- 117

Query: 115 KGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK 174
                  ++                ++ G   T  A +P   L+    ++   S V+ L 
Sbjct: 118 ----VQAFADA-----------FDVDFVGVINTVHAALPY--LTSGASIITTGS-VAGL- 158

Query: 175 DLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT 234
                                            +   A     P  + Y  +K ++++YT
Sbjct: 159 -----------------------------IAAAQPPGAGGPQGPGGAGYSYAKQLVDSYT 189

Query: 235 RILAKRYPKF--CVNCVCPGFVKTDINFHAGILS-VEEGAESPVKLALLPDGGPTGRFFL 291
             LA +        N + P  V TD+   A +        E+P +   L           
Sbjct: 190 LQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPT 249

Query: 292 RKEEA 296
              EA
Sbjct: 250 PYVEA 254

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 96.1 bits (240), Expect = 8e-24
 Identities = 50/256 (19%), Positives = 86/256 (33%), Gaps = 68/256 (26%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
            K AV+TG+++GIG    R LA  G  + L AR   R  +   +L         + +H L
Sbjct: 2   MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ--GVEVFYHHL 59

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D+S   SV   +  +  +FG +D++  NAG+   K           ++ +   E ++ ++
Sbjct: 60  DVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFK-----------RLEELSEE-EFHEM 107

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      ++ N  G  +T +A +  L+ +    LV  S                  
Sbjct: 108 -----------IEVNLLGVWRTLKAFLDSLKRTGGLALVTTSD----------------- 139

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC 245
                                    ++ R   P+   Y  +K    A  R      P   
Sbjct: 140 -------------------------VSARLI-PYGGGYVSTKWAARALVRTFQIENPDVR 173

Query: 246 VNCVCPGFVKTDINFH 261
              + PG V T     
Sbjct: 174 FFELRPGAVDTYFGGS 189

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 96.5 bits (241), Expect = 1e-23
 Identities = 51/299 (17%), Positives = 92/299 (30%), Gaps = 84/299 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-------------ARDEKRGLEAVEKLKAS 53
           + A +TG+ +G G     ++A++G  ++                       E V  ++A+
Sbjct: 12  RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA 71

Query: 54  GVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQI 113
                 ++   +D  D   +  + D      G+LDI+  NAG+A+ +   D         
Sbjct: 72  NRR---IVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDD--------- 119

Query: 114 TKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSA 172
                  D+  V           +  N  GT  T  A  P ++E      ++ +SS  + 
Sbjct: 120 ---ITPEDFRDV-----------MDINVTGTWNTVMAGAPRIIEGGRGGSIILISS-AAG 164

Query: 173 LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINA 232
           +K                                           P    Y  SK  +  
Sbjct: 165 MK----------------------------------------MQ-PFMIHYTASKHAVTG 183

Query: 233 YTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             R  A    K    VN V PG V T +     + +V +  E+  +L+ +         
Sbjct: 184 LARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWV 242

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 95.2 bits (238), Expect = 2e-23
 Identities = 62/262 (23%), Positives = 99/262 (37%), Gaps = 83/262 (31%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFH 63
             K A+VTG+++GIG      LA +G  VV+  A +E++  E V+++K  G D   +   
Sbjct: 3   KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAV--- 59

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA----- 118
           + D+++   V+++       FG++DIL NNAG                 +TK D      
Sbjct: 60  RADVANAEDVTNMVKQTVDVFGQVDILVNNAG-----------------VTK-DNLLMRM 101

Query: 119 -EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
            E +W  V           + TN  G     +A+   +      R+VN++S V       
Sbjct: 102 KEEEWDTV-----------INTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVV------- 143

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
                                          G   N G     + Y  +KA +   T+  
Sbjct: 144 -------------------------------GVTGNPG----QANYVAAKAGVIGLTKTS 168

Query: 238 AKRYPK--FCVNCVCPGFVKTD 257
           AK        VN + PGF+ TD
Sbjct: 169 AKELASRNITVNAIAPGFIATD 190

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 96.1 bits (240), Expect = 2e-23
 Identities = 44/287 (15%), Positives = 79/287 (27%), Gaps = 79/287 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA-SGVDPELLLFHQL 65
           K A +TG   G+G      L+S G   V+ +R         E++ + +G     +   Q 
Sbjct: 27  KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNK---VHAIQC 83

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D+ D   V +    +    G  +I+ NNA      F       S            W  +
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGN---FISPTERLS---------PNAWKTI 131

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
                            GT      +   L++       +++++                
Sbjct: 132 -----------TDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIY-------------- 166

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                    E  +            +KA + A ++ LA  + K+
Sbjct: 167 ------------------------AETGS----GFVVPSASAKAGVEAMSKSLAAEWGKY 198

Query: 245 --CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
               N + PG +KT   F            +      +    P GR 
Sbjct: 199 GMRFNVIQPGPIKTKGAF-------SRLDPTGTFEKEMIGRIPCGRL 238

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 95.7 bits (239), Expect = 2e-23
 Identities = 48/255 (18%), Positives = 81/255 (31%), Gaps = 72/255 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + AVVTG+  GIG       A  G  V+   R +    E  +++   G           D
Sbjct: 32  RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGS---AEAVVAD 87

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++DL   +++A+ +     ++D+L NNAGI +     +  +              W +V 
Sbjct: 88  LADLEGAANVAEELA-ATRRVDVLVNNAGIIARA-PAEEVSLG-----------RWREV- 133

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     L  N         +    +    S R+V ++S +S               
Sbjct: 134 ----------LTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLS--------------- 168

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                           + +AY  SK  +   TR LA  +     
Sbjct: 169 -----------------------FQGG----RNVAAYAASKHAVVGLTRALASEWAGRGV 201

Query: 245 CVNCVCPGFVKTDIN 259
            VN + PG+V T   
Sbjct: 202 GVNALAPGYVVTANT 216

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 94.9 bits (237), Expect = 3e-23
 Identities = 54/260 (20%), Positives = 90/260 (34%), Gaps = 83/260 (31%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFHQL 65
              VVTG+++GIG      L   G  V++  AR  K   E  ++++A G           
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITF---GG 58

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA------E 119
           D+S  A V ++       +G +D++ NNAG                 IT+ D       +
Sbjct: 59  DVSKEADVEAMMKTAIDAWGTIDVVVNNAG-----------------ITR-DTLLIRMKK 100

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK 179
             W +V           +  N  G     +A   ++      R++N++S V         
Sbjct: 101 SQWDEV-----------IDLNLTGVFLCTQAATKIMMKKRKGRIINIASVV--------- 140

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
                                        G I N G     + Y  +KA +  +++  A+
Sbjct: 141 -----------------------------GLIGNIG----QANYAAAKAGVIGFSKTAAR 167

Query: 240 RYPK--FCVNCVCPGFVKTD 257
                   VN VCPGF+ +D
Sbjct: 168 EGASRNINVNVVCPGFIASD 187

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 94.9 bits (237), Expect = 3e-23
 Identities = 56/260 (21%), Positives = 97/260 (37%), Gaps = 82/260 (31%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           + A++TG+++GIG     +LA  G  + +   ++ ++  E  E+ +  G    L+     
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGS--PLVAVLGA 59

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA------E 119
           ++ +  + ++L        G LD L NNAG                 IT+ D       +
Sbjct: 60  NLLEAEAATALVHQAAEVLGGLDTLVNNAG-----------------ITR-DTLLVRMKD 101

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEK 179
            DW  V           L+ N     +T    + L+  +   R+VN++S V         
Sbjct: 102 EDWEAV-----------LEANLSAVFRTTREAVKLMMKARFGRIVNITSVV--------- 141

Query: 180 ARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK 239
                                        G + N G     + Y  SKA +  +TR +AK
Sbjct: 142 -----------------------------GILGNPG----QANYVASKAGLIGFTRAVAK 168

Query: 240 RYPK--FCVNCVCPGFVKTD 257
            Y +    VN V PGF++T+
Sbjct: 169 EYAQRGITVNAVAPGFIETE 188

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 94.5 bits (236), Expect = 4e-23
 Identities = 65/262 (24%), Positives = 100/262 (38%), Gaps = 83/262 (31%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFH 63
             K A+VTG+++GIG     QLA +G  V +  A  +++    VE++KA GVD   +   
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI--- 59

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA----- 118
           Q +++D   V ++   + +QFG LD+L NNAG                 IT+ D      
Sbjct: 60  QANVADADEVKAMIKEVVSQFGSLDVLVNNAG-----------------ITR-DNLLMRM 101

Query: 119 -EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
            E +W  V           + TN  G     +   P +    S  ++NLSS V       
Sbjct: 102 KEQEWDDV-----------IDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVV------- 143

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
                                          G + N G     + Y  +KA +   T+  
Sbjct: 144 -------------------------------GAVGNPG----QANYVATKAGVIGLTKSA 168

Query: 238 AKRYPK--FCVNCVCPGFVKTD 257
           A+        VN V PGF+ +D
Sbjct: 169 ARELASRGITVNAVAPGFIVSD 190

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 93.8 bits (234), Expect = 9e-23
 Identities = 54/286 (18%), Positives = 83/286 (29%), Gaps = 78/286 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           K A +TG   GIGF         G   V+ +R   R L A  KL  A+G      L   +
Sbjct: 28  KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRR---CLPLSM 84

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D+    +V +  D    +FG++DIL N A      F   A A S            +  V
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAGN---FLCPAGALS---------FNAFKTV 132

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      +  +  GT      L           +VN+++     +    +      
Sbjct: 133 -----------MDIDTSGTFNVSRVLYEKFFRDHGGVIVNITA-TLGNRGQALQV----- 175

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                            H+ +   +KA ++A TR LA  +    
Sbjct: 176 ---------------------------------HAGS---AKAAVDAMTRHLAVEWGPQN 199

Query: 245 -CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             VN + PG +                      L+      P  R 
Sbjct: 200 IRVNSLAPGPISGTEGL-------RRLGGPQASLSTKVTASPLQRL 238

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 93.3 bits (233), Expect = 1e-22
 Identities = 65/266 (24%), Positives = 96/266 (36%), Gaps = 83/266 (31%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPEL 59
             +   K ++VTGS +GIG     +LAS G TV++T    E+    A E     GV    
Sbjct: 2   EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHG 61

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA- 118
           +   ++++    S++   + I      +DIL NNAG                 IT+ D  
Sbjct: 62  V---EMNLLSEESINKAFEEIYNLVDGIDILVNNAG-----------------ITR-DKL 100

Query: 119 -----EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSAL 173
                 +DW +V           LK N  GT    +  +  +      R+VN+SS     
Sbjct: 101 FLRMSLLDWEEV-----------LKVNLTGTFLVTQNSLRKMIKQRWGRIVNISS----- 144

Query: 174 KDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAY 233
                                   VV         G   N G       Y  +KA +  +
Sbjct: 145 ------------------------VV---------GFTGNVG----QVNYSTTKAGLIGF 167

Query: 234 TRILAKRYPK--FCVNCVCPGFVKTD 257
           T+ LAK        VN V PGF++TD
Sbjct: 168 TKSLAKELAPRNVLVNAVAPGFIETD 193

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 92.2 bits (230), Expect = 1e-22
 Identities = 42/271 (15%), Positives = 73/271 (26%), Gaps = 90/271 (33%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
            ++TG+  G+G    R L   G  ++L+ R      E   ++ A  +          D++
Sbjct: 3   VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVGARAL--------PADLA 52

Query: 69  DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQ 128
           D     +L +    + G LD+L +  G A      +A  D               ++   
Sbjct: 53  DELEAKALLE----EAGPLDLLVHAVGKAGRASVREAGRD------------LVEEM--- 93

Query: 129 TYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE 188
                   L  +          ++         R V   +Y                   
Sbjct: 94  --------LAAHLLTAA----FVLKHARFQKGARAVFFGAYP------------------ 123

Query: 189 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CV 246
                                 +      P  +AY  +K  + AY     K   +    +
Sbjct: 124 --------------------RYVQV----PGFAAYAAAKGALEAYLEAARKELLREGVHL 159

Query: 247 NCVCPGFVKTDINFHAG-----ILSVEEGAE 272
             V    V T +    G      LS EE A 
Sbjct: 160 VLVRLPAVATGLWAPLGGPPKGALSPEEAAR 190

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 92.6 bits (231), Expect = 2e-22
 Identities = 58/265 (21%), Positives = 98/265 (36%), Gaps = 85/265 (32%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
                 K A+VTG+++GIG      LA +G  V+ TA  E       + L  +G      
Sbjct: 4   FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK----- 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA-- 118
               L++++  S+ ++   I  +FG +DIL NNAG                 IT+ D   
Sbjct: 59  -GMALNVTNPESIEAVLKAITDEFGGVDILVNNAG-----------------ITR-DNLL 99

Query: 119 ----EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK 174
               E +WS +           ++TN     +  +A++  +      R++N+ S V    
Sbjct: 100 MRMKEEEWSDI-----------METNLTSIFRLSKAVLRGMMKKRQGRIINVGSVV---- 144

Query: 175 DLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT 234
                                             G + N G     + Y  +KA +  +T
Sbjct: 145 ----------------------------------GTMGNAG----QANYAAAKAGVIGFT 166

Query: 235 RILAKRYPK--FCVNCVCPGFVKTD 257
           + +A+        VN V PGF++TD
Sbjct: 167 KSMAREVASRGVTVNTVAPGFIETD 191

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 92.6 bits (231), Expect = 2e-22
 Identities = 57/265 (21%), Positives = 89/265 (33%), Gaps = 85/265 (32%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M + T + A+VTG+  GIG    R   ++G  V L    E +  E    L          
Sbjct: 22  MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVF----- 76

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA-- 118
                ++SD  S+  LA+  + +   +DIL NNAG                 IT+ D   
Sbjct: 77  -VFSANLSDRKSIKQLAEVAEREMEGIDILVNNAG-----------------ITR-DGLF 117

Query: 119 ----EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK 174
               + DW  V           L  N          LI  +      R++N++S V    
Sbjct: 118 VRMQDQDWDDV-----------LAVNLTAASTLTRELIHSMMRRRYGRIINITSIV---- 162

Query: 175 DLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT 234
                                             G + N G     + Y  +KA +  ++
Sbjct: 163 ----------------------------------GVVGNPG----QTNYCAAKAGLIGFS 184

Query: 235 RILAKRYPK--FCVNCVCPGFVKTD 257
           + LA+        VNC+ PGF+K+ 
Sbjct: 185 KALAQEIASRNITVNCIAPGFIKSA 209

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 92.6 bits (231), Expect = 2e-22
 Identities = 57/262 (21%), Positives = 90/262 (34%), Gaps = 83/262 (31%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFH 63
           +++ A VTG   GIG    ++L   G  VV     +  R ++ +E  KA G D       
Sbjct: 12  SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYAS--- 68

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA----- 118
           + ++ D  S     D +K + G++D+L NNAG                 IT+ D      
Sbjct: 69  EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAG-----------------ITR-DVVFRKM 110

Query: 119 -EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
              DW  V           + TN        + +I  +      R++N+SS         
Sbjct: 111 TREDWQAV-----------IDTNLTSLFNVTKQVIDGMVERGWGRIINISSVN------- 152

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
                                          G+    G     + Y  +KA I+ +T  L
Sbjct: 153 -------------------------------GQKGQFG----QTNYSTAKAGIHGFTMSL 177

Query: 238 AKRYPK--FCVNCVCPGFVKTD 257
           A+        VN V PG++ TD
Sbjct: 178 AQEVATKGVTVNTVSPGYIGTD 199

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 91.4 bits (228), Expect = 3e-22
 Identities = 44/166 (26%), Positives = 67/166 (40%), Gaps = 30/166 (18%)

Query: 3   EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           E  K   ++TG+++GIG  T R L +KG  V L ARDEKR      +L+ +       L 
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGA-------LP 54

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDW 122
              D+ +    +     ++  FG+L  L NNAG+  +K            + +   E +W
Sbjct: 55  LPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMK-----------PVHELTLE-EW 102

Query: 123 SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
             V           L TN  G        +P L       +VN+ S
Sbjct: 103 RLV-----------LDTNLTGAFLGIRHAVPALLRRGGGTIVNVGS 137

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 92.7 bits (231), Expect = 3e-22
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 3/98 (3%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPEL 59
           M     + A+VTG++ GIG    R L  +G+ VV  AR     +E    + K++G    L
Sbjct: 27  MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGN-IEELAAECKSAGYPGTL 85

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIA 97
           + + + D+S+   + S+   I++Q   +DI  NNAG+A
Sbjct: 86  IPY-RCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA 122

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 92.2 bits (230), Expect = 4e-22
 Identities = 52/267 (19%), Positives = 87/267 (32%), Gaps = 84/267 (31%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-------------ARDEKRGLEAVEKLKAS 53
           + A +TG+ +G G     +LA++G  ++                   +   E    ++  
Sbjct: 16  RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ 75

Query: 54  GVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQI 113
           G      L   LD+ D A++  L      QFG+LD++  NAG+ S     +         
Sbjct: 76  GRK---ALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWE--------- 123

Query: 114 TKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSA 172
                +  W  V           +  N  GT +T  A +P ++E  +   +V +SS    
Sbjct: 124 ---LTDEQWDTV-----------IGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSA-- 167

Query: 173 LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINA 232
                                               G  A     P +  Y  SK  + A
Sbjct: 168 ------------------------------------GLKAT----PGNGHYSASKHGLTA 187

Query: 233 YTRILAKRYPKF--CVNCVCPGFVKTD 257
            T  LA    ++   VN + P  V+T 
Sbjct: 188 LTNTLAIELGEYGIRVNSIHPYSVETP 214

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 91.5 bits (228), Expect = 5e-22
 Identities = 48/285 (16%), Positives = 77/285 (27%), Gaps = 91/285 (31%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
            KK AVVTG+  G+G E V+ L+     V    R+ +      E      +        +
Sbjct: 4   KKKIAVVTGATGGMGIEIVKDLSRDH-IVYALGRNPEHLAALAEIEGVEPI--------E 54

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            DI          D +K     +D L + A +A               I  G    +W  
Sbjct: 55  SDIVKEVLEEGGVDKLK-NLDHVDTLVHAAAVA-----------RDTTIEAGSVA-EWHA 101

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
                       L  N     +    L+P L  + S  ++ ++S                
Sbjct: 102 H-----------LDLNVIVPAELSRQLLPALR-AASGCVIYINSGA-------------- 135

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK----- 239
                                   G   + G     + Y  SK  +        K     
Sbjct: 136 ------------------------GNGPHPGN----TIYAASKHALRGLADAFRKEEANN 167

Query: 240 --RYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPD 282
             R     V+ V PG   T +      L   +G     ++ + P 
Sbjct: 168 GIR-----VSTVSPGPTNTPMLQG---LMDSQGTNFRPEIYIEPK 204

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 91.5 bits (228), Expect = 7e-22
 Identities = 56/262 (21%), Positives = 90/262 (34%), Gaps = 83/262 (31%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-LKASGVDPELLLFH 63
            K+ A VTG   G+G    R+L   G+ V ++  +    +       + +G D +     
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAY--- 80

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA----- 118
            +D++D  S    A+ +   FGK+D+L NNAG                 IT+ DA     
Sbjct: 81  AVDVADFESCERCAEKVLADFGKVDVLINNAG-----------------ITR-DATFMKM 122

Query: 119 -EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
            + DW  V           ++T+        +  I  +      R+VN+ S         
Sbjct: 123 TKGDWDAV-----------MRTDLDAMFNVTKQFIAGMVERRFGRIVNIGS--------- 162

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
                               V          G     G     + Y  +KA I+ +T+ L
Sbjct: 163 --------------------VN---------GSRGAFG----QANYASAKAGIHGFTKTL 189

Query: 238 AKRYPK--FCVNCVCPGFVKTD 257
           A    K    VN V PG++ T 
Sbjct: 190 ALETAKRGITVNTVSPGYLATA 211

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 91.5 bits (228), Expect = 8e-22
 Identities = 49/266 (18%), Positives = 81/266 (30%), Gaps = 83/266 (31%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL------------EAVEKLKASG 54
           K A +TG+ +G G     +LA+ G  ++     ++                 V+ ++  G
Sbjct: 14  KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG 73

Query: 55  VDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQIT 114
                ++  Q D+ D  S+S+       + G+LDI+  NAGIA +    D          
Sbjct: 74  SR---IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDD---------- 120

Query: 115 KGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSAL 173
                  W  V           +  N  G   T +  IP L++      +V +SS     
Sbjct: 121 ------GWHDV-----------IDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSA--- 160

Query: 174 KDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAY 233
                                              G        P S  Y  +K  +   
Sbjct: 161 -----------------------------------GLAGVGSADPGSVGYVAAKHGVVGL 185

Query: 234 TRILAKRYPKF--CVNCVCPGFVKTD 257
            R+ A         VN + P  V+T 
Sbjct: 186 MRVYANLLAGQMIRVNSIHPSGVETP 211

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 91.5 bits (228), Expect = 1e-21
 Identities = 49/267 (18%), Positives = 80/267 (29%), Gaps = 82/267 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT------------ARDEKRGLEAVEKLKASG 54
           K A +TG+ +G G      LA +G  ++                      E V +++A G
Sbjct: 29  KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG 88

Query: 55  VDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQIT 114
                ++  Q+D+ D  ++ +  D   TQ G+LDI+  NA +AS    ++          
Sbjct: 89  RR---IIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPK----- 140

Query: 115 KGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSYVSAL 173
                  W  +           +  N  G   T    IP ++       +V  SS     
Sbjct: 141 ------TWRDM-----------IDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG--- 180

Query: 174 KDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAY 233
                                              G         +   Y  SK  ++  
Sbjct: 181 -----------------------------------GLRGA----ENIGNYIASKHGLHGL 201

Query: 234 TRILAKRYPKF--CVNCVCPGFVKTDI 258
            R +A         VN VCP  V T +
Sbjct: 202 MRTMALELGPRNIRVNIVCPSSVATPM 228

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 90.7 bits (226), Expect = 1e-21
 Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 28/165 (16%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFH 63
             K  ++TG++ GIG    R+L   G  ++L AR + R +EA   +++ +G      L  
Sbjct: 3   MDKVILITGASGGIGEGIARELGVAGAKILLGARRQAR-IEAIATEIRDAGGT---ALAQ 58

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWS 123
            LD++D  SV++ A      +G++D+L NNAG+  +             +     + +W 
Sbjct: 59  VLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSP-----------LAAVKVD-EWE 106

Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
           ++           +  N  G      A++P++E   S +++N+ S
Sbjct: 107 RM-----------IDVNIKGVLWGIGAVLPIMEAQRSGQIINIGS 140

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 90.6 bits (226), Expect = 1e-21
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 3/90 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          K A+VTGS +G+GF     LA+ G  V+L         E+V+ L   G D         D
Sbjct: 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYD---AHGVAFD 66

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGI 96
          ++D  ++ +    +  +   +DIL NNAGI
Sbjct: 67 VTDELAIEAAFSKLDAEGIHVDILINNAGI 96

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 91.2 bits (227), Expect = 1e-21
 Identities = 40/269 (14%), Positives = 73/269 (27%), Gaps = 72/269 (26%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK--LKASGVDPELLLF 62
               AVVTG+ K IG     +L   G  VV+   +      ++     K       +   
Sbjct: 22  EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVC-- 79

Query: 63  HQLDISD----LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA 118
            Q D+++     AS   + +     FG+ D+L NNA        +    +        + 
Sbjct: 80  -QADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET 138

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP------RLVNLSSYVSA 172
           +   +++           + TN         +     + ++         +VNL   +  
Sbjct: 139 Q--VAEL-----------IGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAM-- 183

Query: 173 LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINA 232
                                                +          S Y + K  +  
Sbjct: 184 ------------------------------------VDQPC----MAFSLYNMGKHALVG 203

Query: 233 YTRILAKRY-PK-FCVNCVCPGFVKTDIN 259
            T+  A    P    VN V PG     + 
Sbjct: 204 LTQSAALELAPYGIRVNGVAPGVSLLPVA 232

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 90.4 bits (225), Expect = 2e-21
 Identities = 43/263 (16%), Positives = 78/263 (29%), Gaps = 80/263 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG-------LEAVEKLKASGVDPEL 59
           K   +TG+++GIG     + A  G  V + A+              A   + A+G     
Sbjct: 7   KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQG-- 64

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGD 117
            L  + DI +   V +        FG +DIL NNA    ++   D               
Sbjct: 65  -LALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTP------------- 110

Query: 118 AEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
               +  +            + N  G+    +A +P L  + +P ++ L+          
Sbjct: 111 -MKRFDLM-----------QQVNARGSFVCAQACLPHLLQAPNPHILTLAP--------- 149

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
                                                 W    + Y ++K  ++  T  L
Sbjct: 150 -----PPSLNPA--------------------------WWGAHTGYTLAKMGMSLVTLGL 178

Query: 238 AKRYPKF--CVNCVCPG-FVKTD 257
           A  +      +N + P   + TD
Sbjct: 179 AAEFGPQGVAINALWPRTVIATD 201

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 90.0 bits (224), Expect = 3e-21
 Identities = 50/271 (18%), Positives = 89/271 (32%), Gaps = 86/271 (31%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT----------------ARDEKRGLEAVEKL 50
           K A VTG+ +G G     +LA +G  ++                  A   +   E  + +
Sbjct: 12  KVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLV 71

Query: 51  KASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSG 110
           K        ++  ++D+ D  ++ +  D    Q G+LDI+  NAGI +    +D  ++  
Sbjct: 72  KGHNRR---IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEE- 127

Query: 111 YQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLSSY 169
                     DW+++           +  N  G  +T +A +P ++       ++  SS 
Sbjct: 128 ----------DWTEM-----------IDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS- 165

Query: 170 VSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAV 229
           V  LK                                           PH+  Y  +K  
Sbjct: 166 VGGLK-----------------------------------------AYPHTGHYVAAKHG 184

Query: 230 INAYTRILAKRYPKF--CVNCVCPGFVKTDI 258
           +    R       +    VN V P  VKT +
Sbjct: 185 VVGLMRAFGVELGQHMIRVNSVHPTHVKTPM 215

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 89.1 bits (222), Expect = 3e-21
 Identities = 46/256 (17%), Positives = 83/256 (32%), Gaps = 77/256 (30%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           ++ A+VTG ++GIG      L ++G  V + +R+ +   EA + L A  +          
Sbjct: 2   ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE---EAAQSLGAVPL--------PT 50

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D+        L        G L +L + A +   K  ++  +             +W +V
Sbjct: 51  DLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALE-LSYE-----------EWRRV 97

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      L  +        +A  P +  +   R++ + S              V  
Sbjct: 98  -----------LYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGS--------------VTT 132

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                        G      AY  +K  +   TR LAK + +  
Sbjct: 133 FTA--------------------------GGPVPIPAYTTAKTALLGLTRALAKEWARLG 166

Query: 245 -CVNCVCPGFVKTDIN 259
             VN +CPG+V+T+  
Sbjct: 167 IRVNLLCPGYVETEFT 182

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 90.0 bits (224), Expect = 4e-21
 Identities = 57/272 (20%), Positives = 90/272 (33%), Gaps = 83/272 (30%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT------------ARDEKRGLEAVE 48
           M     K A +TG+ +G G     +LA  G  +V                  +   E V 
Sbjct: 41  MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVR 100

Query: 49  KLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFAD 108
            ++  G     ++  Q D+ DLAS+ ++ D    +FG +DIL +N GI++    +     
Sbjct: 101 LVEEQGRR---IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVS---- 153

Query: 109 SGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP-LLELSDSPRLVNLS 167
                     +  WS +           L+TN  G    C A++P ++E      ++ +S
Sbjct: 154 --------LTDQQWSDI-----------LQTNLIGAWHACRAVLPSMIERGQGGSVIFVS 194

Query: 168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSK 227
           S V                                      G        P  S Y  SK
Sbjct: 195 STV--------------------------------------GLRGA----PGQSHYAASK 212

Query: 228 AVINAYTRILAKRYPKF--CVNCVCPGFVKTD 257
             +      LA    +    VN V PG V T+
Sbjct: 213 HGVQGLMLSLANEVGRHNIRVNSVNPGAVNTE 244

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 87.7 bits (218), Expect = 5e-21
 Identities = 27/257 (10%), Positives = 65/257 (25%), Gaps = 93/257 (36%)

Query: 4   ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
           +     ++ G++  +G     +L  K   V+   R        V                
Sbjct: 1   SNAMKILLIGASGTLGSAVKERLEKKA-EVITAGRHS----GDV---------------- 39

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWS 123
            +DI+++ S+  + +    Q GK+D + +  G A+         +    +T        +
Sbjct: 40  TVDITNIDSIKKMYE----QVGKVDAIVSATGSATFS----PLTE----LT----PEKNA 83

Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV 183
                        + +   G        I    L+D       +  +             
Sbjct: 84  VT-----------ISSKLGGQINLVLLGIDS--LNDKGSFTLTTGIM------------- 117

Query: 184 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP- 242
                                                ++  ++   + A+ +  A   P 
Sbjct: 118 ----------------------------MEDPI-VQGASAAMANGAVTAFAKSAAIEMPR 148

Query: 243 KFCVNCVCPGFVKTDIN 259
              +N V P  ++   +
Sbjct: 149 GIRINTVSPNVLEESWD 165

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 89.6 bits (223), Expect = 5e-21
 Identities = 44/305 (14%), Positives = 88/305 (28%), Gaps = 90/305 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG-------LEAVEKLKASGVDPEL 59
           K   ++G ++GIG    +++A+ G  V L A+  +           A ++++ +G     
Sbjct: 10  KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQA-- 67

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGD 117
            L    DI D  +V++       QFG +DI  NNA   ++    ++              
Sbjct: 68  -LPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVP------------- 113

Query: 118 AEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
               +  +                 GT    ++ IP ++  D+P ++ LS  +       
Sbjct: 114 -LKRFDLM-----------NGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPI------- 154

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
                                                      + Y ++K  +      +
Sbjct: 155 ----------------------------------RLEPKWLRPTPYMMAKYGMTLCALGI 180

Query: 238 AKRYPKFC--VNCVCPGFVKTDINFHAGILS---------VEEGAESPVKLALLPDGGPT 286
           A+         N + P            +            E  A++   + L      T
Sbjct: 181 AEELRDAGIASNTLWPRTTVATAAVQNLLGGDEAMARSRKPEVYADA-AYVVLNKPSSYT 239

Query: 287 GRFFL 291
           G   L
Sbjct: 240 GNTLL 244

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 88.4 bits (220), Expect = 7e-21
 Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 5/94 (5%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFH 63
            K A++TG++ GIG  T R LA++G  V + AR  ++ L A  ++L A+G     +   
Sbjct: 6  QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEK-LRALGDELTAAGAK---VHVL 61

Query: 64 QLDISDLASVSSLADFIKTQFGKLDILANNAGIA 97
          +LD++D   V +         G LDIL NNAGI 
Sbjct: 62 ELDVADRQGVDAAVASTVEALGGLDILVNNAGIM 95

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 89.4 bits (222), Expect = 8e-21
 Identities = 54/274 (19%), Positives = 89/274 (32%), Gaps = 68/274 (24%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKA-SGVDPELLLF 62
           +KK  ++TG++ G G  T   LA  G  V  + RD   R    VE +   +  +   L  
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDW 122
            +LD+    SV    D I  + G++D+L +NAG                    G AE   
Sbjct: 64  LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVF----------------GPAEA-- 105

Query: 123 SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA 182
                 T E   E    N   T++   A +P +       L+ +SS              
Sbjct: 106 -----FTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISS-------------- 146

Query: 183 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP 242
                                           G  P+ + Y  +KA ++A     A+   
Sbjct: 147 SSSAG---------------------------GTPPYLAPYFAAKAAMDAIAVQYARELS 179

Query: 243 KF--CVNCVCPGFVKTDINFHAGILSVEEGAESP 274
           ++    + + PG   +  N  A     ++ A   
Sbjct: 180 RWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQA 213

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 87.9 bits (219), Expect = 9e-21
 Identities = 54/265 (20%), Positives = 86/265 (32%), Gaps = 89/265 (33%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M + T K +++TG++ GIG    R L   G  V+++  +E++       LK +       
Sbjct: 9   MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYT----- 63

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA-- 118
                ++++    S+L      +   LDIL  NAG                 IT  D   
Sbjct: 64  -IEVCNLANKEECSNLIS----KTSNLDILVCNAG-----------------ITS-DTLA 100

Query: 119 ----EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK 174
               + D+ KV           +  N           I  +      R++N+SS V    
Sbjct: 101 IRMKDQDFDKV-----------IDINLKANFILNREAIKKMIQKRYGRIINISSIV---- 145

Query: 175 DLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT 234
                                             G   N G     + Y  SKA +   T
Sbjct: 146 ----------------------------------GIAGNPG----QANYCASKAGLIGMT 167

Query: 235 RILAKRYPK--FCVNCVCPGFVKTD 257
           + L+         VN V PGF+K+D
Sbjct: 168 KSLSYEVATRGITVNAVAPGFIKSD 192

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 88.1 bits (219), Expect = 1e-20
 Identities = 39/172 (22%), Positives = 69/172 (40%), Gaps = 28/172 (16%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKG---ITVVLTARDEKRGLEAV-EKLKASGVD 56
                KK  ++TG++ GIG  T  +        + ++L AR  ++ LE + + +     +
Sbjct: 28  AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEK-LEELKKTIDQEFPN 86

Query: 57  PELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKG 116
            ++ +  QLDI+    +    + +  +F  +DIL NNAG A      D            
Sbjct: 87  AKVHVA-QLDITQAEKIKPFIENLPQEFKDIDILVNNAGKA---LGSDRVGQ-------I 135

Query: 117 DAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
             E D   V             TN        +A++P+ +  +S  +VNL S
Sbjct: 136 ATE-DIQDV-----------FDTNVTALINITQAVLPIFQAKNSGDIVNLGS 175

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 88.6 bits (220), Expect = 2e-20
 Identities = 42/284 (14%), Positives = 74/284 (26%), Gaps = 83/284 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPEL 59
           M   T   A+VTG+ K +G      L ++G  V L   R           L A   +  +
Sbjct: 41  MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAI 100

Query: 60  LLFHQLDISDLAS-----------------VSSLADFIKTQFGKLDILANNAGIASVKFD 102
            +  Q D+S++A+                  + L     T +G+ D+L NNA        
Sbjct: 101 TV--QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASS------ 152

Query: 103 MDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP- 161
              F  +       D                 +   +N        +A    +  + +  
Sbjct: 153 ---FYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKH 209

Query: 162 -----RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGW 216
                 ++N+   +                                              
Sbjct: 210 RGTNYSIINMVDAM--------------------------------------TNQPL--- 228

Query: 217 CPHSSAYKVSKAVINAYTRILAK----RYPKFCVNCVCPGFVKT 256
               + Y ++K  +   TR  A        +  VN V PG    
Sbjct: 229 -LGYTIYTMAKGALEGLTRSAALELAPL--QIRVNGVGPGLSVL 269

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 87.2 bits (217), Expect = 2e-20
 Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 34/163 (20%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPEL---LLFHQL 65
            +VTG+  G G    R+   +G  V+ T R ++R L+ ++         EL   L   QL
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQER-LQELKD--------ELGDNLYIAQL 53

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D+ + A++  +   +  ++  +DIL NNAG+A     M+              E DW   
Sbjct: 54  DVRNRAAIEEMLASLPAEWCNIDILVNNAGLA---LGMEPAHK-------ASVE-DWE-- 100

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
                +       TN  G      A++P +   +   ++N+ S
Sbjct: 101 --TMID-------TNNKGLVYMTRAVLPGMVERNHGHIINIGS 134

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 87.8 bits (218), Expect = 2e-20
 Identities = 42/282 (14%), Positives = 74/282 (26%), Gaps = 79/282 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPEL 59
           M   T   A+VTG+ K +G      L ++G  V L   R           L A   +  +
Sbjct: 4   MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAI 63

Query: 60  LLFHQLDISDLAS-----------------VSSLADFIKTQFGKLDILANNAGIASVKFD 102
            +  Q D+S++A+                  + L     T +G+ D+L NNA        
Sbjct: 64  TV--QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASS------ 115

Query: 103 MDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP- 161
              F  +       D                 +   +N        +A    +  + +  
Sbjct: 116 ---FYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKH 172

Query: 162 -----RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGW 216
                 ++N+   +                                              
Sbjct: 173 RGTNYSIINMVDAM--------------------------------------TNQPL--- 191

Query: 217 CPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKT 256
               + Y ++K  +   TR  A      +  VN V PG    
Sbjct: 192 -LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 232

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 89.7 bits (223), Expect = 2e-20
 Identities = 58/264 (21%), Positives = 86/264 (32%), Gaps = 90/264 (34%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAV-EKLKASGVDPELLLF 62
             K AVVTG+ +GIG       A  G TVV    D     L+ V +K+  + +       
Sbjct: 212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTAL------- 264

Query: 63  HQLDISDLASVSSLADFIKTQFG-KLDILANNAGIASVKFDMDAFADSGYQITKGDA--- 118
             LD++   +V  +   +    G K+DIL NNAGI                 T+ D    
Sbjct: 265 -TLDVTADDAVDKITAHVTEHHGGKVDILVNNAGI-----------------TR-DKLLA 305

Query: 119 ---EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKD 175
              E  W  V           +  N    ++  E L+    + +  R++ LSS       
Sbjct: 306 NMDEKRWDAV-----------IAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMA----- 349

Query: 176 LPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTR 235
                                            G   NRG     + Y  +KA +     
Sbjct: 350 ---------------------------------GIAGNRG----QTNYATTKAGMIGLAE 372

Query: 236 ILAKRYPK--FCVNCVCPGFVKTD 257
            LA         +N V PGF++T 
Sbjct: 373 ALAPVLADKGITINAVAPGFIETK 396

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 87.2 bits (217), Expect = 3e-20
 Identities = 54/276 (19%), Positives = 91/276 (32%), Gaps = 92/276 (33%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL------------EAVE 48
           MA+   K A++TG  +G+G      LA  G  + +  R E   +            E V 
Sbjct: 5   MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVA 64

Query: 49  KLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFAD 108
            ++ +G      +  ++D+ D A++ S     +   G +DI   NAGI+++    +    
Sbjct: 65  LVEKTGRR---CISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPE---- 117

Query: 109 SGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
                        W +V           + TN  GT  T  A+ P +   +  R+V +SS
Sbjct: 118 --------VESAQWDEV-----------IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSS 158

Query: 169 YVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKA 228
            +                                      G  AN       ++Y  SK 
Sbjct: 159 ML--------------------------------------GHSAN----FAQASYVSSKW 176

Query: 229 VINAYTRILAK-------RYPKFCVNCVCPGFVKTD 257
            +   T+  A              VN V PG ++T 
Sbjct: 177 GVIGLTKCAAHDLVGYGIT-----VNAVAPGNIETP 207

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 86.9 bits (216), Expect = 3e-20
 Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 29/165 (17%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQ 64
                +TG+  G G    R+ A  G ++VLT R E+R L+A+  +L A       +L   
Sbjct: 21  SSTLFITGATSGFGEACARRFAEAGWSLVLTGRREER-LQALAGELSAKTR----VLPLT 75

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           LD+ D A++S+  D +  +F  L  L NNAG+A      D            D + DW  
Sbjct: 76  LDVRDRAAMSAAVDNLPEEFATLRGLINNAGLA---LGTDPAQS-------CDLD-DWD- 123

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR-LVNLSS 168
                 +       TN  G   +   L+P L    +   +VNL S
Sbjct: 124 ---TMVD-------TNIKGLLYSTRLLLPRLIAHGAGASIVNLGS 158

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 86.5 bits (215), Expect = 4e-20
 Identities = 36/169 (21%), Positives = 70/169 (41%), Gaps = 33/169 (19%)

Query: 1   MAEA-TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPEL 59
           M     KK  V+TG++ GIG    R+ + +G  ++L AR  +R L+A+            
Sbjct: 10  MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVER-LKALNL--------PN 60

Query: 60  LLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAE 119
            L  Q+D++D  +  +     +  +G  D + NNAG+                I   +A 
Sbjct: 61  TLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMM--LLGQ---------IDTQEAN 109

Query: 120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
            +W     + ++        N  G     +A++  ++  +   ++N+SS
Sbjct: 110 -EWQ----RMFD-------VNVLGLLNGMQAVLAPMKARNCGTIINISS 146

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 86.4 bits (215), Expect = 5e-20
 Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 4/91 (4%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           + A+VTG ++G+GF   + LA  G +VV+ +R+ +   EA +KL +  GV+    +  + 
Sbjct: 22  RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE---TMAFRC 78

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGI 96
           D+S+   V  L + +K +FGKLD + N AGI
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI 109

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 85.0 bits (211), Expect = 1e-19
 Identities = 55/289 (19%), Positives = 80/289 (27%), Gaps = 82/289 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
               +TGS  GIG      LA  G TV+   R +   +EA                   D
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQ-ADIEA-------------------D 41

Query: 67  ISDLASVSSLADFIKTQFG-KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           +S      +    +  + G  LD L   AG+                        +   V
Sbjct: 42  LSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGVT-------------------AANSGLV 82

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS---YVSALKDLPEKARA 182
                 +AV     NY+G     + L   L     P  V + S         +LP     
Sbjct: 83  ------VAV-----NYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAM 131

Query: 183 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP 242
           + GD     E                  +A +    H  AY  SK  +    R     + 
Sbjct: 132 LAGDEARAIE------------------LAEQQGQTHL-AYAGSKYAVTCLARRNVVDWA 172

Query: 243 KFC--VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
                +N V PG V+T +       +     E     +      P GR 
Sbjct: 173 GRGVRLNVVAPGAVETPLL--QASKADPRYGE-----STRRFVAPLGRG 214

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 84.9 bits (211), Expect = 1e-19
 Identities = 58/265 (21%), Positives = 85/265 (32%), Gaps = 93/265 (35%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
                 +  +VTG N+GIG    R  A  G  V +T R      E  E   A        
Sbjct: 16  PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSG----EPPEGFLA-------- 63

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA-- 118
              + DI+D   V      I+   G +++L  NAG                 +TK D   
Sbjct: 64  --VKCDITDTEQVEQAYKEIEETHGPVEVLIANAG-----------------VTK-DQLL 103

Query: 119 ----EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALK 174
               E D++ V           ++TN  GT +  +     +  +   R+V +SS V    
Sbjct: 104 MRMSEEDFTSV-----------VETNLTGTFRVVKRANRAMLRAKKGRVVLISSVV---- 148

Query: 175 DLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT 234
                                             G + + G     + Y  SKA +  + 
Sbjct: 149 ----------------------------------GLLGSAG----QANYAASKAGLVGFA 170

Query: 235 RILAKRYPK--FCVNCVCPGFVKTD 257
           R LA+         N V PGFV TD
Sbjct: 171 RSLARELGSRNITFNVVAPGFVDTD 195

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 84.1 bits (209), Expect = 2e-19
 Identities = 46/261 (17%), Positives = 82/261 (31%), Gaps = 93/261 (35%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
             +  +VTG N+GIG    ++LA+ G  V +T R               GV        +
Sbjct: 14  VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF------GV--------E 59

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA------ 118
           +D++D  +V      ++   G +++L +NAG                 ++  DA      
Sbjct: 60  VDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG-----------------LSA-DAFLMRMT 101

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
           E  + KV           +  N  G  +  +     ++ +   R++ + S          
Sbjct: 102 EEKFEKV-----------INANLTGAFRVAQRASRSMQRNKFGRMIFIGSVS-------- 142

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
                                         G           + Y  SKA +    R +A
Sbjct: 143 ------------------------------GLWGIGN----QANYAASKAGVIGMARSIA 168

Query: 239 KRYPK--FCVNCVCPGFVKTD 257
           +   K     N V PG++ TD
Sbjct: 169 RELSKANVTANVVAPGYIDTD 189

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 83.4 bits (207), Expect = 5e-19
 Identities = 43/255 (16%), Positives = 84/255 (32%), Gaps = 89/255 (34%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +V  +++GIG      L+ +G  V + AR+E       E LK SG        H+  
Sbjct: 20  KGVLVLAASRGIGRAVADVLSQEGAEVTICARNE-------ELLKRSG--------HRYV 64

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGI--ASVKFDMDAFADSGYQITKGDAEVDWSK 124
           + D   +    D +  +  ++DIL  NAG   A    ++                 D+ +
Sbjct: 65  VCD---LRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELT--------------NEDFKE 107

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
                       + + +    +     +P ++     R+V ++S                
Sbjct: 108 A-----------IDSLFLNMIKIVRNYLPAMKEKGWGRIVAITS---------------- 140

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                         V           I N      S++   ++  +  + + L+     +
Sbjct: 141 ------------FSVI-------SP-IENLY---TSNS---ARMALTGFLKTLSFEVAPY 174

Query: 245 --CVNCVCPGFVKTD 257
              VNCV PG+ +T+
Sbjct: 175 GITVNCVAPGWTETE 189

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 80.7 bits (200), Expect = 3e-18
 Identities = 37/286 (12%), Positives = 71/286 (24%), Gaps = 86/286 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
              V+TG++ G+G E  +   ++G    LT R E + L  V   L  +        +   
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESK-LSTVTNCLSNNV------GYRAR 54

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D++    V  L + +         + ++AG            +        D E     +
Sbjct: 55  DLASHQEVEQLFEQL---DSIPSTVVHSAGSGY----FGLLQE-------QDPE-QIQTL 99

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      ++ N          L+   +      +V + S                 
Sbjct: 100 -----------IENNLSSAINVLRELVKRYKDQPV-NVVMIMS----------------- 130

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC 245
                                     A +      S Y   K  +      +        
Sbjct: 131 -------------------------TAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKP 165

Query: 246 --VNCVCPGFVKTDINFHAGI-------LSVEEGAESPVKLALLPD 282
             +  V PG + T+    +G        +S E+ A           
Sbjct: 166 MKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDAALMIHGALANIG 211

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 81.5 bits (202), Expect = 4e-18
 Identities = 56/260 (21%), Positives = 93/260 (35%), Gaps = 74/260 (28%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M+E + K  +VTG++ G G        + G TV+ TAR      EA++ L A+   P+  
Sbjct: 1   MSE-SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARR----TEALDDLVAA--YPDRA 53

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
               LD++D   +  +A  +  ++G++D+L NNAG   V                G  E 
Sbjct: 54  EAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQV----------------GAFEE 97

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
                   T     +  + + +G  +   AL+P +    S  +VN+SS            
Sbjct: 98  -------TTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISS------------ 138

Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                                            +      SAY  +KA +   +  LA  
Sbjct: 139 ------------------------------FGGQLSFAGFSAYSATKAALEQLSEGLADE 168

Query: 241 YPKFC--VNCVCPGFVKTDI 258
              F   V  V PG  +T++
Sbjct: 169 VAPFGIKVLIVEPGAFRTNL 188

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 81.2 bits (201), Expect = 4e-18
 Identities = 43/262 (16%), Positives = 82/262 (31%), Gaps = 66/262 (25%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           + +     A+V+G   G+G  TVR+L + G+ VV+     ++G    ++L          
Sbjct: 25  IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAE----- 79

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
            F   +++   SV +  +           +  + G         A        +  D   
Sbjct: 80  -FVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFG------VAQRIVQRDGSPADMG- 131

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR--LVNLSSYVSALKDLPE 178
            ++K       + +  L   Y   +    ++       +  R  LV  +S ++       
Sbjct: 132 GFTKT------IDLY-LNGTYNVARLVAASIAAAEPRENGERGALVLTAS-IAGY----- 178

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
                                        EG+I         +AY  +KA +   T   A
Sbjct: 179 -----------------------------EGQIG-------QTAYAAAKAGVIGLTIAAA 202

Query: 239 KRYPKF--CVNCVCPGFVKTDI 258
           +        VN + PG +KT I
Sbjct: 203 RDLSSAGIRVNTIAPGTMKTPI 224

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 80.4 bits (199), Expect = 4e-18
 Identities = 28/259 (10%), Positives = 62/259 (23%), Gaps = 85/259 (32%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
              +V G    +G   +      G TV+                       +  +    +
Sbjct: 4   GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND-------------QADSNILVDGN 50

Query: 67  ISDLASVSSLADFIKT--QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            +      S+ +   +  Q  ++D +   AG  +           G   +K   + +   
Sbjct: 51  KNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWA----------GGSASSKDFVK-NADL 99

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           +           +K + + +    +     L+      L    +                
Sbjct: 100 M-----------IKQSVWSSAIAAKLATTHLK--PGGLLQLTGAAA-------------- 132

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                      A     P    Y ++KA ++  T  LA +    
Sbjct: 133 ---------------------------AMGPT-PSMIGYGMAKAAVHHLTSSLAAKDSGL 164

Query: 245 C----VNCVCPGFVKTDIN 259
                V  + P  + T +N
Sbjct: 165 PDNSAVLTIMPVTLDTPMN 183

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 77.4 bits (191), Expect = 5e-17
 Identities = 29/257 (11%), Positives = 62/257 (24%), Gaps = 81/257 (31%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +V G    +G   V+   ++   V      E     A   +K +             
Sbjct: 8   RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSF---------- 57

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
            ++ A   +          K+D +   AG  +           G   +K   + +   + 
Sbjct: 58  -TEQADQVTAEVGKLLGDQKVDAILCVAGGWA----------GGNAKSKSLFK-NCDLM- 104

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                      K + + +  +       L+  +   L    +                  
Sbjct: 105 ----------WKQSIWTSTISSHLATKHLK--EGGLLTLAGAKA---------------- 136

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----P 242
                                    A  G  P    Y ++K  ++   + LA +      
Sbjct: 137 -------------------------ALDGT-PGMIGYGMAKGAVHQLCQSLAGKNSGMPS 170

Query: 243 KFCVNCVCPGFVKTDIN 259
                 V P  + T +N
Sbjct: 171 GAAAIAVLPVTLDTPMN 187

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 76.9 bits (190), Expect = 1e-16
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 14/109 (12%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG++ G+G    R LA +G TV+        G E   +L A+      + F   D
Sbjct: 8   RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAA------VRFRNAD 61

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASV--------KFDMDAFA 107
           +++ A  ++   F K +FG +  L N AG A             +D+FA
Sbjct: 62  VTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFA 110

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 76.9 bits (190), Expect = 1e-16
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 6/91 (6%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
            AV+TG   G+G  T  +L  +G + VL       G    +KL  +       +F   D
Sbjct: 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNC------VFAPAD 66

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAGIA 97
          ++    V +     K +FG++D+  N AGIA
Sbjct: 67 VTSEKDVQTALALAKGKFGRVDVAVNCAGIA 97

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 77.2 bits (191), Expect = 1e-16
 Identities = 62/282 (21%), Positives = 91/282 (32%), Gaps = 86/282 (30%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKL-KASGVDPELLLFHQ 64
           + A+VTG + GIG       A +G  V +     E+   + V+ L +  G    LL    
Sbjct: 50  RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLL---P 106

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            D+SD +   SL    +   G LDILA  AG       +    D    +T       + +
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQ---TAIPEIKD----LT----SEQFQQ 155

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
                          N +      +  IPLL    S  ++  SS             A  
Sbjct: 156 T-----------FAVNVFALFWITQEAIPLLPKGAS--IITTSSIQ-----------AYQ 191

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK----- 239
                                            PH   Y  +KA I  Y+R LAK     
Sbjct: 192 PS-------------------------------PHLLDYAATKAAILNYSRGLAKQVAEK 220

Query: 240 --RYPKFCVNCVCPGFVKTDINFHAGILS--VEE-GAESPVK 276
             R     VN V PG + T +    G     + + G ++P+K
Sbjct: 221 GIR-----VNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMK 257

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 76.7 bits (189), Expect = 3e-16
 Identities = 40/170 (23%), Positives = 66/170 (38%), Gaps = 36/170 (21%)

Query: 6   KKYAVVTGSNKGIGFETVRQLAS---KGITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +   ++TG + GIG     +LAS   +   V  T RD K      E  +A    P  L  
Sbjct: 2   RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLET 61

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDW 122
            QLD+ D  SV++  + +    G++D+L  NAG+  +                G  E   
Sbjct: 62  LQLDVRDSKSVAAARERVT--EGRVDVLVCNAGLGLL----------------GPLE--- 100

Query: 123 SKVCYQTYELAVECLK----TNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
                    L  + +      N  GT +  +A +P ++   S R++   S
Sbjct: 101 --------ALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGS 142

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 73.7 bits (182), Expect = 2e-15
 Identities = 50/261 (19%), Positives = 81/261 (31%), Gaps = 82/261 (31%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           K  ++TG + GIG       A +G  + +   DE+      ++  +  GV   LL     
Sbjct: 48  KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLL---PG 104

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D+SD      +      Q G L+IL NN      +  ++        IT         K 
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLE-------YIT----AEQLEKT 153

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                       + N +      +A +  L+  D   ++N +S V           A  G
Sbjct: 154 -----------FRINIFSYFHVTKAALSHLKQGDV--IINTASIV-----------AYEG 189

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK------ 239
           +                                    Y  +K  I A+TR L++      
Sbjct: 190 N-------------------------------ETLIDYSATKGAIVAFTRSLSQSLVQKG 218

Query: 240 -RYPKFCVNCVCPGFVKTDIN 259
            R     VN V PG + T + 
Sbjct: 219 IR-----VNGVAPGPIWTPLI 234

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 65.7 bits (161), Expect = 9e-13
 Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 18/109 (16%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             AVVTG   G+G  T ++L   G  VV+         E V              F   D
Sbjct: 10  AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG----EDVVADLGDRA-----RFAAAD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASV--------KFDMDAFA 107
           ++D A+V+S  D +    G L I+ N AG  +          F + AF 
Sbjct: 61  VTDEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFR 108

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 63.8 bits (156), Expect = 3e-12
 Identities = 17/109 (15%), Positives = 38/109 (34%), Gaps = 24/109 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTG   G+G      L ++G  VV+     + G + +              + + D
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GEDLI--------------YVEGD 47

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASV--------KFDMDAFA 107
           ++    V       + +   L  + + AG+              +++F 
Sbjct: 48  VTREEDVRRAVARAQ-EEAPLFAVVSAAGVGLAEKILGKEGPHGLESFR 95

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 57.8 bits (140), Expect = 1e-09
 Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 48/176 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL---------TARDEKRGLEAVEKLKASGVDP 57
           K  ++TG+  G+G     + A  G  VV+            + K     V+++  +G   
Sbjct: 9   KVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA 68

Query: 58  ELLLFHQLDISDLASVSSLADFIKT---QFGKLDILANNAGIASVK--FDMDAFADSGYQ 112
                    ++D  +V      ++T    FG + ++ NNAGI        M         
Sbjct: 69  ---------VADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMT-------- 111

Query: 113 ITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
                 E D+  V           +  +  G     +A  P  +     R+VN SS
Sbjct: 112 ------EKDYKLV-----------IDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSS 150

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 38/174 (21%), Positives = 65/174 (37%), Gaps = 42/174 (24%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
                 K  ++TG+  G+G E  +  A  G  VV+   D K   + V+++KA+G +    
Sbjct: 317 TVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVN--DFKDATKTVDEIKAAGGEA--- 371

Query: 61  LFHQLDISDLASVSSLAD-FIKT---QFGKLDILANNAGIASVK--FDMDAFADSGYQIT 114
                   D   V+  ++  IK    ++G +DIL NNAGI   +    M           
Sbjct: 372 ------WPDQHDVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMS---------- 415

Query: 115 KGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
               + +W  V            + +  GT        P        R++N++S
Sbjct: 416 ----KQEWDSV-----------QQVHLIGTFNLSRLAWPYFVEKQFGRIINITS 454

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 13/106 (12%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVV----------LTARDEKRGLEAVEKL 50
           M     +  +VTG+  GIG       A++G  VV            A         V+++
Sbjct: 22  MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEI 81

Query: 51  KASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGI 96
            A+G +    +    +++D    + L       FG LD+L NNAGI
Sbjct: 82  TAAGGEA---VADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGI 124

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 55.4 bits (134), Expect = 4e-09
 Identities = 31/176 (17%), Positives = 64/176 (36%), Gaps = 48/176 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL---------TARDEKRGLEAVEKLKASGVDP 57
           +  +VTG+  G+G       A +G  VV+           +      + VE+++  G   
Sbjct: 10  RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA 69

Query: 58  ELLLFHQLDISDLASVSSLADFIKT---QFGKLDILANNAGIASVK--FDMDAFADSGYQ 112
                    +++  SV +    +KT    FG++D++ NNAGI   +    +         
Sbjct: 70  ---------VANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRIS-------- 112

Query: 113 ITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
                 + DW  +            + +  G+ Q   A    ++  +  R++  +S
Sbjct: 113 ------DEDWDII-----------QRVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS 151

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 54.8 bits (132), Expect = 1e-08
 Identities = 40/176 (22%), Positives = 69/176 (39%), Gaps = 48/176 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVL---------TARDEKRGLEAVEKLKASGVDP 57
           + AVVTG+  G+G E     A +G  VV+             ++     V++++ +G + 
Sbjct: 20  RVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE- 78

Query: 58  ELLLFHQLDISDLASVSSLADFIKT---QFGKLDILANNAGIASVK--FDMDAFADSGYQ 112
                    ++D  SV   A  I+T    FG++DIL NNAGI   +              
Sbjct: 79  --------AVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTS-------- 122

Query: 113 ITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSS 168
                 E DW+ V              +  G+ +  +A  P ++  +  R++  SS
Sbjct: 123 ------EQDWNLV-----------NDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSS 161

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 53.3 bits (128), Expect = 2e-08
 Identities = 16/89 (17%), Positives = 26/89 (29%), Gaps = 11/89 (12%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K AVV      +G  +   LA +G  VVL  R   +   A + +               +
Sbjct: 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVN----VTAAE 175

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAG 95
            +D AS +               +     
Sbjct: 176 TADDASRAEA-------VKGAHFVFTAGA 197

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          +  VV G  + + I +   R L   G  ++ T   E R  ++V +L A  +D    +   
Sbjct: 8  RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE-RLEKSVHEL-AGTLDRNDSIILP 65

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D+++ A + +    IK Q G +  +
Sbjct: 66 CDVTNDAEIETCFASIKEQVGVIHGI 91

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 7/86 (8%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K  ++TG  SNK I +   + +  +G  +  T   + +    VEKL  +  +P  +L   
Sbjct: 27  KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDR--VEKL-CAEFNPAAVL--P 81

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL 90
            D+     +  L   +   +  LD +
Sbjct: 82  CDVISDQEIKDLFVELGKVWDGLDAI 107

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 4/92 (4%)

Query: 1   MAEATKKYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPE 58
           M     K  V+ G  + + I F   + L   G  +V T R E R  + +EKL    ++  
Sbjct: 27  MVNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKE-RSRKELEKL-LEQLNQP 84

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDIL 90
               +Q+D+     V +  + I    G +D +
Sbjct: 85  EAHLYQIDVQSDEEVINGFEQIGKDVGNIDGV 116

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 42.6 bits (101), Expect = 6e-05
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          K A+V G  + + +GF    +L   G  V L+ + E R     EKL A  +   LL   +
Sbjct: 9  KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-RLRPEAEKL-AEALGGALLF--R 64

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D++    + +L   +K  FG LD L
Sbjct: 65 ADVTQDEELDALFAGVKEAFGGLDYL 90

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 43.3 bits (102), Expect = 7e-05
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 29/103 (28%)

Query: 7   KYAVVTGSNKG-IGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           KY ++TG+ KG IG E ++ L   G  VV+T                S    ++  ++Q 
Sbjct: 477 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVT---------------TSRFSKQVTDYYQS 521

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFAD 108
             +   +  S           L ++  N    S K D++A  +
Sbjct: 522 IYAKYGAKGS----------TLIVVPFN--QGS-KQDVEALIE 551

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 18/86 (20%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          K  +VTG  S   I +   + +  +G  +  T +++ +    VE+  A+ +  +++L  Q
Sbjct: 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEF-AAQLGSDIVL--Q 65

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D+++ AS+ ++   +   + K D  
Sbjct: 66 CDVAEDASIDTMFAELGKVWPKFDGF 91

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          K  ++TG  SN+ I +   +    +G  +  T   + R  + + +  A+    EL+    
Sbjct: 15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEF-AAEFGSELVF--P 70

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
           D++D A + +L   +KT +  LD L
Sbjct: 71 CDVADDAQIDALFASLKTHWDSLDGL 96

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K  V+ G  ++K + +   + + ++G  V LT   E    + V+ L A  +  +L +   
Sbjct: 31  KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE-TFKKRVDPL-AESLGVKLTV--P 86

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL 90
            D+SD  SV ++   +  ++G LD +
Sbjct: 87  CDVSDAESVDNMFKVLAEEWGSLDFV 112

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 6/86 (6%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K  ++ G  +N+ I +   +     G  +  T + +    + VE L A  +   +     
Sbjct: 32  KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGD-ALKKRVEPL-AEELGAFVAG--H 87

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL 90
            D++D AS+ ++ + ++ ++GKLD L
Sbjct: 88  CDVADAASIDAVFETLEKKWGKLDFL 113

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 6/86 (6%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          K  ++ G  +NK I +   +   ++G T+  T  +E    + V  + A  ++   +   +
Sbjct: 7  KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPI-AQELNSPYVY--E 62

Query: 65 LDISDLASVSSLADFIKTQFGKLDIL 90
          LD+S      SL + +K   G LD +
Sbjct: 63 LDVSKEEHFKSLYNSVKKDLGSLDFI 88

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 10/89 (11%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          K  +V+G  ++  I F   R    +G  +VLT  D  R ++ +       +  +  L  +
Sbjct: 8  KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR----LPAKAPLL-E 62

Query: 65 LDISDLASVSSLADFIKTQFG---KLDIL 90
          LD+ +   ++SLA  +    G   KLD +
Sbjct: 63 LDVQNEEHLASLAGRVTEAIGAGNKLDGV 91

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K A++TG  + + I +   +    +G  +  T     +  + V ++ A G   +L++  +
Sbjct: 22  KRALITGVANERSIAYGIAKSFHREGAQLAFTYATP-KLEKRVREI-AKGFGSDLVV--K 77

Query: 65  LDISDLASVSSLADFIKTQFGKLDIL 90
            D+S    + +L  F++  +G LDI+
Sbjct: 78  CDVSLDEDIKNLKKFLEENWGSLDII 103

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 1  MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
          M   ++    VTG++  IG   V +L  +G TV  T RD     + V+ L         L
Sbjct: 1  MGSQSET-VCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNV-KKVKHLLDLPKAETHL 58

Query: 61 LFHQLDISDLAS 72
             + D++D  S
Sbjct: 59 TLWKADLADEGS 70

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	298
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.98
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.98
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.97
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.97
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.97
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.96
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.96
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.96
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.96
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.96
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.94
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.94
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.93
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.93
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.92
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.9
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.9
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.88
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.88
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.88
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.88
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.87
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.87
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.87
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.87
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.86
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.86
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.86
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.86
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.86
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.86
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.86
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.86
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.86
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.85
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.85
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.85
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.85
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.84
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.84
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.83
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.83
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.83
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.83
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.83
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.83
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.83
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.83
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.82
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.82
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.82
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.82
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.82
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.82
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.82
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.82
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.81
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.81
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.81
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.81
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.81
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.81
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.81
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.81
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.8
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.8
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.8
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.8
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.8
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.79
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.79
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.79
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.79
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.78
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.78
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.77
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.76
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.76
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.75
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.75
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.75
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.74
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.74
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.72
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.72
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.72
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.7
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.68
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.67
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.66
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.65
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.65
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.62
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.61
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.56
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.55
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.54
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.53
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.52
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.51
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.5
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.48
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.47
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.46
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.35
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.27
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.22
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.04
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.86
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.85
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.75
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.72
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.7
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.54
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.51
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.49
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.49
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.46
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.41
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.36
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.35
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.31
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.31
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.3
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.26
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.25
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.23
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.22
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.17
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.15
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.14
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.09
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.08
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.07
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.07
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.07
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.01
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.99
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.98
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.92
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.88
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.87
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.86
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.86
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.85
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.83
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.81
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.79
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.73
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.72
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.72
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.69
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.66
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.63
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.62
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.62
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.6
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.6
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.56
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.54
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.54
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.53
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.51
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.51
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.49
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.47
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.43
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.4
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.37
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.35
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.35
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.31
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.3
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.23
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.22
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.16
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.12
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.11
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.08
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.07
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.05
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.04
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.03
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.97
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	96.97
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.96
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.96
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.87
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.86
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.85
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.77
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.75
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.74
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.73
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.69
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.68
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.68
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.67
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.65
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.63
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.62
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.62
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.61
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.59
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.59
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.58
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.57
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.56
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.51
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.49
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.46
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.45
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.44
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.42
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.41
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.38
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.38
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.35
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.34
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.34
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.34
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.32
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.3
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.28
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.28
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.27
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.26
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.26
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.25
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.25
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.21
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.2
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.16
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.13
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.09
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.09
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.07
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.01
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.98
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	95.95
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.94
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	95.91
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.87
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	95.87
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.79
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.76
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.75
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	95.75
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.72
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.69
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.67
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.66
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.65
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	95.63
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.62
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	95.59
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.56
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	95.53
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	95.44
1lnq_A	336	MTHK channels, potassium channel related protein;	95.43
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.42
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.4
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.35
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.33
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.22
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.18
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.16
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.14
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.1
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.07
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.05
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.04
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.03
3l07_A	285	Bifunctional protein fold; structural genomics, ID	94.97
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	94.91
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	94.88
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	94.87
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	94.86
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	94.79
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	94.78
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	94.71
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	94.69
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	94.62
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	94.61
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	94.6
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	94.56
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	94.53
3qha_A	296	Putative oxidoreductase; seattle structural genomi	94.5
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	94.49
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	94.48

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=3.2e-48  Score=341.16  Aligned_cols=230  Identities=26%  Similarity=0.295  Sum_probs=202.5

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++++++.++++..+.+   +.++++|++++++++++++++.
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~---~~~~~~Dvt~~~~v~~~~~~~~   79 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE---VLGVKADVSKKKDVEEFVRRTF   79 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999999887654   8999999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ++||+||+||||||+....                      .++.+.+.++|++.+++|+.|+|+++|+++|+|++++.|
T Consensus        80 ~~~G~iDiLVNNAGi~~~~----------------------~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G  137 (254)
T 4fn4_A           80 ETYSRIDVLCNNAGIMDGV----------------------TPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKG  137 (254)
T ss_dssp             HHHSCCCEEEECCCCCCTT----------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred             HHcCCCCEEEECCcccCCC----------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc
Confidence            9999999999999976432                      123457899999999999999999999999999988889


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||+.+..+.                                          ++..+|++||+|+.+|+|+||.|+
T Consensus       138 ~IVnisS~~g~~~~------------------------------------------~~~~~Y~asKaal~~ltr~lA~el  175 (254)
T 4fn4_A          138 VIVNTASIAGIRGG------------------------------------------FAGAPYTVAKHGLIGLTRSIAAHY  175 (254)
T ss_dssp             EEEEECCGGGTCSS------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEechhhcCCC------------------------------------------CCChHHHHHHHHHHHHHHHHHHHh
Confidence            99999999887654                                          678899999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCCCChhh-----hhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGILSVEE-----GAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~~~~~~-----~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .|||||+|+||+|+|++.........+.     ....|+++...|++++....||+|+.++|
T Consensus       176 a~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~  239 (254)
T 4fn4_A          176 GDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASF  239 (254)
T ss_dssp             GGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence              5899999999999999875443222211     12346788889999999999999999887

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.1e-47  Score=337.85  Aligned_cols=228  Identities=23%  Similarity=0.278  Sum_probs=202.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++++++.+++++..+.+   +.++++|++++++++++++++.+
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~---~~~~~~Dv~~~~~v~~~~~~~~~   82 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYD---AHGVAFDVTDELAIEAAFSKLDA   82 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCC---EEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEeeCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999999999999999999999887654   88999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc-CCCC
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SDSP  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g  161 (298)
                      ++|+||+||||||+....                       ++.+.+.++|++.+++|+.|+|+++|+++|+|.+ +++|
T Consensus        83 ~~G~iDiLVNNAG~~~~~-----------------------~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G  139 (255)
T 4g81_D           83 EGIHVDILINNAGIQYRK-----------------------PMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGG  139 (255)
T ss_dssp             TTCCCCEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred             HCCCCcEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCC
Confidence            999999999999987544                       3345789999999999999999999999999965 4669


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          ++..+|++||+|+.+|+|+||.|+
T Consensus       140 ~IVnisS~~~~~~~------------------------------------------~~~~~Y~asKaal~~ltr~lA~el  177 (255)
T 4g81_D          140 KIINIGSLTSQAAR------------------------------------------PTVAPYTAAKGGIKMLTCSMAAEW  177 (255)
T ss_dssp             EEEEECCGGGTSBC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeehhhcCCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHh
Confidence            99999999887654                                          778999999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCC---CChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGI---LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .|||||+|+||+|+|++......   .......+.|+++..+|++++....||+|+.++|
T Consensus       178 a~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~  239 (255)
T 4g81_D          178 AQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDY  239 (255)
T ss_dssp             GGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             cccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence              48999999999999998743211   1112235679999999999999999999999887

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=3.9e-46  Score=330.96  Aligned_cols=225  Identities=24%  Similarity=0.291  Sum_probs=190.8

Q ss_pred             CCc-CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAE-ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~-~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |++ |+||++|||||++|||+++|++|+++|++|++++|+.+.+++.++++.   ..   ..++++|+++.+++++++++
T Consensus        23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g---~~---~~~~~~Dv~~~~~v~~~~~~   96 (273)
T 4fgs_A           23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG---GG---AVGIQADSANLAELDRLYEK   96 (273)
T ss_dssp             --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TT---CEEEECCTTCHHHHHHHHHH
T ss_pred             hcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---CC---eEEEEecCCCHHHHHHHHHH
Confidence            443 789999999999999999999999999999999999998888877762   22   78899999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.++||+||+||||||.....                       ++.+.+.++|++.+++|+.|+|+++|+++|+|++  
T Consensus        97 ~~~~~G~iDiLVNNAG~~~~~-----------------------~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--  151 (273)
T 4fgs_A           97 VKAEAGRIDVLFVNAGGGSML-----------------------PLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--  151 (273)
T ss_dssp             HHHHHSCEEEEEECCCCCCCC-----------------------CTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--
T ss_pred             HHHHcCCCCEEEECCCCCCCC-----------------------ChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--
Confidence            999999999999999986543                       2334689999999999999999999999999974  


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          +...+|++||+|+.+|+|+||.
T Consensus       152 ~G~IInisS~~~~~~~------------------------------------------~~~~~Y~asKaav~~ltr~lA~  189 (273)
T 4fgs_A          152 GSSVVLTGSTAGSTGT------------------------------------------PAFSVYAASKAALRSFARNWIL  189 (273)
T ss_dssp             EEEEEEECCGGGGSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEeehhhccCC------------------------------------------CCchHHHHHHHHHHHHHHHHHH
Confidence            4899999998887654                                          7789999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCCCCCChh--------hhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHAGILSVE--------EGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~--------~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      |+  .|||||+|+||+|+|++........+.        ...+.|+++...|++++....||+||.++|
T Consensus       190 Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~  258 (273)
T 4fgs_A          190 DLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSF  258 (273)
T ss_dssp             HTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            99  489999999999999987554323221        234679999999999999999999999887

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=4.7e-45  Score=322.11  Aligned_cols=227  Identities=25%  Similarity=0.231  Sum_probs=191.1

Q ss_pred             CC-cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MA-EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~-~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |. +|+||++|||||++|||+++|++|+++|++|++++|+.++.+ .++++...+.+   ..++++|+++++++++++++
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~v~~   76 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPR---ATYLPVELQDDAQCRDAVAQ   76 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTT---CEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCC---EEEEEeecCCHHHHHHHHHH
Confidence            55 589999999999999999999999999999999999987643 44556655544   88999999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.++||+||+||||||+....+                        .+.+.++|++.+++|+.++|+++|+++|+|+++ 
T Consensus        77 ~~~~~G~iDiLVNnAGi~~~~~------------------------~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-  131 (258)
T 4gkb_A           77 TIATFGRLDGLVNNAGVNDGIG------------------------LDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-  131 (258)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCC------------------------TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHhCCCCEEEECCCCCCCCC------------------------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-
Confidence            9999999999999999764321                        125778999999999999999999999999754 


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      +|+||++||+.+..+.                                          ++..+|++||+|+.+|+|++|.
T Consensus       132 ~G~IVnisS~~~~~~~------------------------------------------~~~~~Y~asKaav~~ltr~lA~  169 (258)
T 4gkb_A          132 RGAIVNISSKTAVTGQ------------------------------------------GNTSGYCASKGAQLALTREWAV  169 (258)
T ss_dssp             TCEEEEECCTHHHHCC------------------------------------------SSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEeehhhccCC------------------------------------------CCchHHHHHHHHHHHHHHHHHH
Confidence            4999999999887554                                          7789999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCCCC-------CChhhhhhhhh-hhhccCCCCCcceEeccCccCCC
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHAGI-------LSVEEGAESPV-KLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~~~-------~~~~~~a~~~~-~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      |+  .|||||+|+||+|+|++......       ...+...+.|+ ++...|++++....||+|+.++|
T Consensus       170 ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~~  238 (258)
T 4gkb_A          170 ALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASH  238 (258)
T ss_dssp             HHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            99  58999999999999998754311       11123345677 48888999999999999999887

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=7.8e-43  Score=314.42  Aligned_cols=295  Identities=54%  Similarity=0.837  Sum_probs=234.7

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH-HHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFI   80 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~   80 (298)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++.+..+++...+..  ++.++++|+++. ++++++++.+
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~~v~~~~~~~   85 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHE--NVVFHQLDVTDPIATMSSLADFI   85 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC--SEEEEECCTTSCHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEEccCCCcHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999999988988876543  389999999998 9999999999


Q ss_pred             HHhcCCccEEEEccccCCccccccccc-------ccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhh
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFA-------DSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP  153 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  153 (298)
                      .++++++|+||||||+.......+...       .......+......|..+.+.+.+.+++.+++|+.|+++++++++|
T Consensus        86 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  165 (311)
T 3o26_A           86 KTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP  165 (311)
T ss_dssp             HHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence            999999999999999875321100000       0000000000112445555678899999999999999999999999


Q ss_pred             hhccCCCCcEEEEccCcccccCCc-hHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHH
Q 022357          154 LLELSDSPRLVNLSSYVSALKDLP-EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINA  232 (298)
Q Consensus       154 ~~~~~~~g~iv~vsS~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~  232 (298)
                      .|++++.|+||++||..+..+... ......+.+...+..............+.+.+.....++++....|++||+|+++
T Consensus       166 ~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~  245 (311)
T 3o26_A          166 LLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNA  245 (311)
T ss_dssp             HHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHH
T ss_pred             hhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHH
Confidence            999888899999999998765432 2223445566777777777777777777777777777777788999999999999


Q ss_pred             HHHHHHHhCCCcEEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          233 YTRILAKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       233 l~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      |+++++.++++|+||+|+||+|+|++.......+++++++.++.++..+++...+.+|+.++.++|
T Consensus       246 ~~~~la~e~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~s~~a~~  311 (311)
T 3o26_A          246 YTRVLANKIPKFQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVVRIALFPDDGPSGFFYDCSELSAF  311 (311)
T ss_dssp             HHHHHHHHCTTSEEEEECCCSBCSGGGTTCCSBCHHHHHHHHHHHHTCCSSCCCSCEETC------
T ss_pred             HHHHHHhhcCCceEEEecCCceecCCcCCCCCCCHHHHHHHHHHHHhCCCCCCCceEeccccccCC
Confidence            999999999889999999999999999888889999999999999999999999999999999987

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=2e-44  Score=315.77  Aligned_cols=212  Identities=24%  Similarity=0.319  Sum_probs=178.3

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +|+||||||++|||+++|++|+++|++|++++|+++.+++..++    ..   .+.++++|++++++++++++++.++||
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~----~~---~~~~~~~Dv~~~~~v~~~v~~~~~~~g   74 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE----RP---NLFYFHGDVADPLTLKKFVEYAMEKLQ   74 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT----CT---TEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----cC---CEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            58999999999999999999999999999999998765554332    22   288999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      +||+||||||.....                       ++.+.+.++|++.+++|+.|+|+++|+++|+|++++ |+||+
T Consensus        75 ~iDiLVNNAG~~~~~-----------------------~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IIn  130 (247)
T 3ged_A           75 RIDVLVNNACRGSKG-----------------------ILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIIN  130 (247)
T ss_dssp             CCCEEEECCCCCCCC-----------------------GGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEE
T ss_pred             CCCEEEECCCCCCCC-----------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEE
Confidence            999999999987543                       334568899999999999999999999999998764 99999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-CCc
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKF  244 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-~~i  244 (298)
                      +||..+..+.                                          ++..+|++||+|+.+|+|+||.|+ ++|
T Consensus       131 isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~ltk~lA~ela~~I  168 (247)
T 3ged_A          131 IASTRAFQSE------------------------------------------PDSEAYASAKGGIVALTHALAMSLGPDV  168 (247)
T ss_dssp             ECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred             EeecccccCC------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            9998887654                                          778999999999999999999999 799


Q ss_pred             EEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      |||+|+||+|+|++...   ...+...+.|+++...|++++....||++
T Consensus       169 rVN~I~PG~i~t~~~~~---~~~~~~~~~Pl~R~g~pediA~~v~fL~s  214 (247)
T 3ged_A          169 LVNCIAPGWINVTEQQE---FTQEDCAAIPAGKVGTPKDISNMVLFLCQ  214 (247)
T ss_dssp             EEEEEEECSBCCCC------CCHHHHHTSTTSSCBCHHHHHHHHHHHHH
T ss_pred             EEEEEecCcCCCCCcHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHHh
Confidence            99999999999998643   23444555666666666666666666654

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=5.4e-45  Score=318.33  Aligned_cols=221  Identities=23%  Similarity=0.220  Sum_probs=188.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+..  ++..+++...+.+   ..++++|++++++++++++    
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~---~~~~~~Dv~d~~~v~~~~~----   76 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGN---ASALLIDFADPLAAKDSFT----   76 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCC---EEEEECCTTSTTTTTTSST----
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCc---EEEEEccCCCHHHHHHHHH----
Confidence            378999999999999999999999999999999999864  4566677766654   8899999999999877663    


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC-CCC
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSP  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g  161 (298)
                       +++||+||||||+....+                       +.+.+.++|++.+++|+.|+|+++|+++|.|.++ +.|
T Consensus        77 -~g~iDiLVNNAGi~~~~~-----------------------~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G  132 (247)
T 4hp8_A           77 -DAGFDILVNNAGIIRRAD-----------------------SVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSG  132 (247)
T ss_dssp             -TTCCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred             -hCCCCEEEECCCCCCCCC-----------------------cccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCc
Confidence             589999999999875442                       3346889999999999999999999999999765 479


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||+.+..+.                                          ++..+|++||+|+.+|+|+||.|+
T Consensus       133 ~IVnisS~~~~~g~------------------------------------------~~~~~Y~asKaav~~ltr~lA~El  170 (247)
T 4hp8_A          133 KVVNIASLLSFQGG------------------------------------------IRVPSYTAAKHGVAGLTKLLANEW  170 (247)
T ss_dssp             EEEEECCGGGTSCC------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEechhhCCCC------------------------------------------CCChHHHHHHHHHHHHHHHHHHHH
Confidence            99999999887654                                          778899999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCC---CChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGI---LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .|||||+|+||+|+|++......   .......+.|+++..+|+|++....||+|+.++|
T Consensus       171 a~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~  232 (247)
T 4hp8_A          171 AAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADY  232 (247)
T ss_dssp             GGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTT
T ss_pred             hhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence              58999999999999998753211   1112235679999999999999999999999987

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.1e-43  Score=313.58  Aligned_cols=233  Identities=17%  Similarity=0.143  Sum_probs=199.8

Q ss_pred             CCcCCCcEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         1 m~~~~~~~vlITGas~--gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      |++|+||++|||||+|  |||+++|++|+++|++|++++|+++.++++.+.+.+.+...  +.++++|++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~   78 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPE--AHLYQIDVQSDEEVINGFE   78 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSS--CEEEECCTTCHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCc--EEEEEccCCCHHHHHHHHH
Confidence            8999999999999875  99999999999999999999999988888888887665432  8899999999999999999


Q ss_pred             HHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                      ++.+++|++|+||||||+....+.                   +..+.+.+.+.|+..+++|+.+++.+++.+.|+|+  
T Consensus        79 ~~~~~~G~iD~lvnnAg~~~~~~~-------------------~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--  137 (256)
T 4fs3_A           79 QIGKDVGNIDGVYHSIAFANMEDL-------------------RGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP--  137 (256)
T ss_dssp             HHHHHHCCCSEEEECCCCCCGGGG-------------------TSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT--
T ss_pred             HHHHHhCCCCEEEecccccccccc-------------------ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence            999999999999999998754321                   12233467788999999999999999999999885  


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                      ++|+||++||..+..+.                                          +++..|++||+|+.+|+|+||
T Consensus       138 ~~G~IVnisS~~~~~~~------------------------------------------~~~~~Y~asKaal~~ltr~lA  175 (256)
T 4fs3_A          138 EGGSIVATTYLGGEFAV------------------------------------------QNYNVMGVAKASLEANVKYLA  175 (256)
T ss_dssp             TCEEEEEEECGGGTSCC------------------------------------------TTTHHHHHHHHHHHHHHHHHH
T ss_pred             cCCEEEEEeccccccCc------------------------------------------ccchhhHHHHHHHHHHHHHHH
Confidence            45899999998887554                                          778999999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCCCCC---ChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHAGIL---SVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      .|+  .|||||+|+||+|+|++.......   ..+...+.|+++..+|++++....||+|+.++|
T Consensus       176 ~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~a~~  240 (256)
T 4fs3_A          176 LDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDLSSG  240 (256)
T ss_dssp             HHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            999  489999999999999987654211   122335678999999999999999999998887

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=7.2e-44  Score=310.57  Aligned_cols=213  Identities=26%  Similarity=0.299  Sum_probs=179.2

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+.+++.      .   ..++..+++|+++.++++++++    +
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~------~---~~~~~~~~~Dv~~~~~v~~~~~----~   75 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP------R---HPRIRREELDITDSQRLQRLFE----A   75 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC------C---CTTEEEEECCTTCHHHHHHHHH----H
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh------h---cCCeEEEEecCCCHHHHHHHHH----h
Confidence            5899999999999999999999999999999999998765421      1   1238899999999999877764    5


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      +|+||+||||||+..+                         +.+.+.++|++.+++|+.|+|+++|+++|+|+++ +|+|
T Consensus        76 ~g~iDiLVNNAGi~~~-------------------------~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~I  129 (242)
T 4b79_A           76 LPRLDVLVNNAGISRD-------------------------REEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSI  129 (242)
T ss_dssp             CSCCSEEEECCCCCCG-------------------------GGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEE
T ss_pred             cCCCCEEEECCCCCCC-------------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeE
Confidence            7999999999997532                         1236889999999999999999999999999754 5999


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||+.+..+.                                          ++..+|++||+|+.+|+|+||.|+  
T Consensus       130 VnisS~~~~~~~------------------------------------------~~~~~Y~asKaav~~ltr~lA~Ela~  167 (242)
T 4b79_A          130 LNIASMYSTFGS------------------------------------------ADRPAYSASKGAIVQLTRSLACEYAA  167 (242)
T ss_dssp             EEECCGGGTSCC------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             EEEeeccccCCC------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence            999999887654                                          778999999999999999999999  


Q ss_pred             CCcEEEEeeCCeeecCCCCCCCCCChh----hhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 PKFCVNCVCPGFVKTDINFHAGILSVE----EGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~~~~~~~----~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      .|||||+|+||+|+|||..... .+++    ...+.|+++..+|+|++....||+|+.++|
T Consensus       168 ~gIrVNaV~PG~i~T~m~~~~~-~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~  227 (242)
T 4b79_A          168 ERIRVNAIAPGWIDTPLGAGLK-ADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASF  227 (242)
T ss_dssp             GTEEEEEEEECSBCCC-----C-CCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             cCeEEEEEEeCCCCChhhhccc-CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            5899999999999999875432 2222    234679999999999999999999999987

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=7.3e-44  Score=315.21  Aligned_cols=221  Identities=21%  Similarity=0.254  Sum_probs=185.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +|+||++|||||++|||+++|++|+++|++|++++|+..+.          ..   ...++++|+++.++++++++++.+
T Consensus         8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~---~~~~~~~Dv~~~~~v~~~~~~~~~   74 (261)
T 4h15_A            8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG----------LP---EELFVEADLTTKEGCAIVAEATRQ   74 (261)
T ss_dssp             CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----------SC---TTTEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC----------CC---cEEEEEcCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999986421          11   145789999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||......                     .++.+.+.++|++.+++|+.++|+++|+++|+|++++.|+
T Consensus        75 ~~G~iDilVnnAG~~~~~~---------------------~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~  133 (261)
T 4h15_A           75 RLGGVDVIVHMLGGSSAAG---------------------GGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGV  133 (261)
T ss_dssp             HTSSCSEEEECCCCCCCCS---------------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             HcCCCCEEEECCCCCccCC---------------------CCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCce
Confidence            9999999999999764321                     1234568899999999999999999999999999888899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                         +.+...|++||+|+.+|+|+||.|+ 
T Consensus       134 Iv~isS~~~~~~~-----------------------------------------~~~~~~Y~asKaal~~lt~~lA~Ela  172 (261)
T 4h15_A          134 VVHVTSIQRVLPL-----------------------------------------PESTTAYAAAKAALSTYSKAMSKEVS  172 (261)
T ss_dssp             EEEECCGGGTSCC-----------------------------------------TTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEEEehhhccCC-----------------------------------------CCccHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999998876542                                         2357889999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC-------CCCChh--------hhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA-------GILSVE--------EGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~-------~~~~~~--------~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                       .|||||+|+||+|+|++....       ...+.+        .....|+++..+|++++....||+|+.++|
T Consensus       173 ~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS~~a~~  245 (261)
T 4h15_A          173 PKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDRAAS  245 (261)
T ss_dssp             GGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence             589999999999999975321       111111        124568889999999999999999998876

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.7e-41  Score=298.84  Aligned_cols=233  Identities=26%  Similarity=0.286  Sum_probs=185.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+++.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..   +.++++|+++.++++++++++
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dv~d~~~v~~~~~~~   99 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQ---AIALEADVSDELQMRNAVRDL   99 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCC---EEEEECCTTCHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHH
Confidence            66788999999999999999999999999999999999999888888888765543   889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.+|++|+||||||+....                      .++.+.+.++|++.+++|+.|+++++++++|.|++++.
T Consensus       100 ~~~~g~iD~lVnnAg~~~~~----------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~  157 (283)
T 3v8b_A          100 VLKFGHLDIVVANAGINGVW----------------------APIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGG  157 (283)
T ss_dssp             HHHHSCCCEEEECCCCCCCB----------------------CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHhCCCCEEEECCCCCCCC----------------------CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence            99999999999999986432                      12234688999999999999999999999999988878


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+....                                        +.++...|++||+|+++|+++++.|
T Consensus       158 g~Iv~isS~~~~~~~----------------------------------------~~~~~~~Y~asKaa~~~l~~~la~e  197 (283)
T 3v8b_A          158 GAIVVVSSINGTRTF----------------------------------------TTPGATAYTATKAAQVAIVQQLALE  197 (283)
T ss_dssp             EEEEEECCSBTTTBC----------------------------------------CSTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEcChhhccCC----------------------------------------CCCCchHHHHHHHHHHHHHHHHHHH
Confidence            999999998876411                                        1256789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCCCCChh--------hhhhhhh--hhhccCCCCCcceEeccCccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAGILSVE--------EGAESPV--KLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~~~~~~--------~~a~~~~--~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +  .+|+||+|+||+|+|++..........        .....|+  ++...|++.+....|++++.++|
T Consensus       198 ~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~  267 (283)
T 3v8b_A          198 LGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARH  267 (283)
T ss_dssp             TTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTT
T ss_pred             hCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccccC
Confidence            9  489999999999999987543211111        0112233  44445555555555555555443

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=2e-40  Score=295.76  Aligned_cols=231  Identities=21%  Similarity=0.245  Sum_probs=192.5

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+..   +.++++|+++.++++++++++.
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dl~d~~~v~~~~~~~~  104 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK---ALPIRCDVTQPDQVRGMLDQMT  104 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCC---CEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---EEEEEcCCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999999999988876544   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-C
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-S  160 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~  160 (298)
                      +++|++|+||||||+....+                       +.+.+.+.|++.+++|+.|+++++++++|.|++++ .
T Consensus       105 ~~~g~iD~lvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~  161 (276)
T 3r1i_A          105 GELGGIDIAVCNAGIVSVQA-----------------------MLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLG  161 (276)
T ss_dssp             HHHSCCSEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC
T ss_pred             HHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            99999999999999875432                       22368899999999999999999999999998765 4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                        .++....|++||+|+++|+++++.|
T Consensus       162 g~iv~isS~~~~~~~----------------------------------------~~~~~~~Y~asKaa~~~l~~~la~e  201 (276)
T 3r1i_A          162 GTIITTASMSGHIIN----------------------------------------IPQQVSHYCTSKAAVVHLTKAMAVE  201 (276)
T ss_dssp             EEEEEECCGGGTSCC----------------------------------------CSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEECchHhcccC----------------------------------------CCCCcchHHHHHHHHHHHHHHHHHH
Confidence            899999998876432                                        1135688999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +  .+|+||+|+||+|+|++...............|+.+...|++.+....|++++.++|
T Consensus       202 ~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~  261 (276)
T 3r1i_A          202 LAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSY  261 (276)
T ss_dssp             HGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGGTT
T ss_pred             HhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            8  589999999999999987543222222334456666667777777777777766554

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=5.2e-41  Score=294.88  Aligned_cols=221  Identities=25%  Similarity=0.310  Sum_probs=184.4

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+++.+++..+++...      ..++++|+++.++++++++++
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~Dv~d~~~v~~~~~~~   77 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDN------GKGMALNVTNPESIEAVLKAI   77 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG------EEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc------ceEEEEeCCCHHHHHHHHHHH
Confidence            45578999999999999999999999999999999999998888777776532      678999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+++|++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++.
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~  134 (248)
T 3op4_A           78 TDEFGGVDILVNNAGITRDNL-----------------------LMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQ  134 (248)
T ss_dssp             HHHHCCCSEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence            999999999999999875432                       234588999999999999999999999999988778


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          ++...|++||+|+++|+++++.|
T Consensus       135 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~l~~~la~e  172 (248)
T 3op4_A          135 GRIINVGSVVGTMGN------------------------------------------AGQANYAAAKAGVIGFTKSMARE  172 (248)
T ss_dssp             EEEEEECCHHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEcchhhcCCC------------------------------------------CCChHHHHHHHHHHHHHHHHHHH
Confidence            999999998776543                                          66889999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCC---------------CCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAG---------------ILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +  .+|+||+|+||+|+|++.....               ..+|++.++..+.++.......+|..+..
T Consensus       173 ~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~v  241 (248)
T 3op4_A          173 VASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHV  241 (248)
T ss_dssp             HGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEE
Confidence            8  4899999999999999865421               23566666666665554334444444433

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=9e-41  Score=296.25  Aligned_cols=220  Identities=23%  Similarity=0.332  Sum_probs=185.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      |+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..   +.++++|+++.++++++++++.+
T Consensus         1 Ml~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dv~d~~~v~~~~~~~~~   77 (264)
T 3tfo_A            1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGT---ALAQVLDVTDRHSVAAFAQAAVD   77 (264)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCE---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999999999998888876543   88999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||+....                       ++.+.+.+.|++.+++|+.|+++++++++|.|++++.|+
T Consensus        78 ~~g~iD~lVnnAG~~~~~-----------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~  134 (264)
T 3tfo_A           78 TWGRIDVLVNNAGVMPLS-----------------------PLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQ  134 (264)
T ss_dssp             HHSCCCEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             HcCCCCEEEECCCCCCCC-----------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeE
Confidence            999999999999986543                       223468899999999999999999999999998877899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      ||++||..+..+.                                          ++...|++||+|+++|+++++.|++
T Consensus       135 IV~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la~e~~  172 (264)
T 3tfo_A          135 IINIGSIGALSVV------------------------------------------PTAAVYCATKFAVRAISDGLRQEST  172 (264)
T ss_dssp             EEEECCGGGTCCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHCS
T ss_pred             EEEEcCHHHcccC------------------------------------------CCChhHHHHHHHHHHHHHHHHHhCC
Confidence            9999998877543                                          6678999999999999999999999


Q ss_pred             CcEEEEeeCCeeecCCCCCC--------------CCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          243 KFCVNCVCPGFVKTDINFHA--------------GILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~~--------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      +||||+|+||+|+|++....              ...+|++.++..+.++..+.....+.++
T Consensus       173 gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~  234 (264)
T 3tfo_A          173 NIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVRQVIEAPQSVDTTEIT  234 (264)
T ss_dssp             SEEEEEEEECCC-----------------------CCCHHHHHHHHHHHHHSCTTEEEEEEE
T ss_pred             CCEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCCccCccceEE
Confidence            99999999999999986331              1357888898888888776654444443

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6.1e-41  Score=296.75  Aligned_cols=225  Identities=27%  Similarity=0.258  Sum_probs=189.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+++.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..  ++.++++|+++.++++++++++
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSG--KVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSS--CEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCC--cEEEEEcCCCCHHHHHHHHHHH
Confidence            67789999999999999999999999999999999999999998888888876522  3899999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+++|++|+||||||+....+                       +.+.+.+.|++.+++|+.++++++++++|.|++++.
T Consensus        83 ~~~~g~id~lvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~  139 (262)
T 3pk0_A           83 VEEFGGIDVVCANAGVFPDAP-----------------------LATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGS  139 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCCCC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHhCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999875432                       223588999999999999999999999999988778


Q ss_pred             CcEEEEccCccc-ccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          161 PRLVNLSSYVSA-LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       161 g~iv~vsS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      |+||++||..+. .+.                                          +....|++||+|+++|+++++.
T Consensus       140 g~iv~isS~~~~~~~~------------------------------------------~~~~~Y~asK~a~~~l~~~la~  177 (262)
T 3pk0_A          140 GRVVLTSSITGPITGY------------------------------------------PGWSHYGATKAAQLGFMRTAAI  177 (262)
T ss_dssp             CEEEEECCSBTTTBCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEechhhccCCC------------------------------------------CCChhhHHHHHHHHHHHHHHHH
Confidence            999999998775 322                                          5678999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      |+  .||+||+|+||+|+|++....               ...+|++.++..+.++.......+|..+..
T Consensus       178 e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~v  247 (262)
T 3pk0_A          178 ELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAV  247 (262)
T ss_dssp             HHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEE
Confidence            98  589999999999999864321               123667777776666654444445554443

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.8e-41  Score=298.39  Aligned_cols=224  Identities=28%  Similarity=0.269  Sum_probs=186.0

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..   +.++++|+++.++++++++.+
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~   79 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE---AAALAGDVGDEALHEALVELA   79 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCC---EEECCCCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEECCCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999888888888665443   889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+++|++|+||||||+.....                      ++.+.+.+.|++.+++|+.|+++++++++|.|++++.
T Consensus        80 ~~~~g~iD~lvnnAg~~~~~~----------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~  137 (280)
T 3tox_A           80 VRRFGGLDTAFNNAGALGAMG----------------------EISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGG  137 (280)
T ss_dssp             HHHHSCCCEEEECCCCCCSCS----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHcCCCCEEEECCCCCCCCC----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence            999999999999999764321                      2234688999999999999999999999999998888


Q ss_pred             CcEEEEccCccc-ccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          161 PRLVNLSSYVSA-LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       161 g~iv~vsS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      |+||++||..+. .+.                                          +....|++||+|+++|+++++.
T Consensus       138 g~iv~isS~~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~  175 (280)
T 3tox_A          138 GSLTFTSSFVGHTAGF------------------------------------------AGVAPYAASKAGLIGLVQALAV  175 (280)
T ss_dssp             EEEEEECCSBTTTBCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEcChhhCcCCC------------------------------------------CCchhHHHHHHHHHHHHHHHHH
Confidence            999999998876 222                                          6678999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCC-C------------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFH-A------------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~-~------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      |+  .+|+||+|+||+|+|++... .                  ...+|++.++..+.++.......+|..+.
T Consensus       176 e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~  248 (280)
T 3tox_A          176 ELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGAALL  248 (280)
T ss_dssp             HHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccCCcCcEEE
Confidence            99  58999999999999998643 1                  12356666666666665444444444443

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=2.7e-40  Score=292.03  Aligned_cols=190  Identities=28%  Similarity=0.351  Sum_probs=169.2

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .++|++|||||++|||+++|++|+++|++|+++ +|+.+.+++..+++...+..   +.++++|+++.++++++++.+.+
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~~~   78 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK---VLVVKANVGQPAKIKEMFQQIDE   78 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHHHH
Confidence            368999999999999999999999999999997 88888888888888765543   89999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||.....+                       +.+.+.+.|++.+++|+.|+++++++++|.|++++.|+
T Consensus        79 ~~g~id~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~  135 (258)
T 3oid_A           79 TFGRLDVFVNNAASGVLRP-----------------------VMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGH  135 (258)
T ss_dssp             HHSCCCEEEECCCCCCCSC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEE
T ss_pred             HcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcE
Confidence            9999999999999764432                       23468899999999999999999999999999888899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.|+ 
T Consensus       136 iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~  173 (258)
T 3oid_A          136 IVSISSLGSIRYL------------------------------------------ENYTTVGVSKAALEALTRYLAVELS  173 (258)
T ss_dssp             EEEEEEGGGTSBC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTG
T ss_pred             EEEECchhhCCCC------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999998876543                                          667899999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFH  261 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~  261 (298)
                       .+|+||+|+||+|+|++...
T Consensus       174 ~~gi~vn~v~PG~v~T~~~~~  194 (258)
T 3oid_A          174 PKQIIVNAVSGGAIDTDALKH  194 (258)
T ss_dssp             GGTEEEEEEEECCBCSGGGGG
T ss_pred             hcCcEEEEEeeCCCcChhhhh
Confidence             48999999999999998654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=6.1e-41  Score=298.33  Aligned_cols=228  Identities=23%  Similarity=0.238  Sum_probs=188.5

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .++.+|++|||||++|||+++|++|+++|++|++++|+.+++++..++++..+..   +.++++|+++.++++++++++.
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dv~d~~~v~~~~~~~~   98 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHD---AEAVAFDVTSESEIIEAFARLD   98 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCC---EEECCCCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---eEEEEcCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999999998888876544   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ++++++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++.|
T Consensus        99 ~~~g~iD~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g  155 (271)
T 4ibo_A           99 EQGIDVDILVNNAGIQFRKP-----------------------MIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYG  155 (271)
T ss_dssp             HHTCCCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred             HHCCCCCEEEECCCCCCCCC-----------------------chhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc
Confidence            99999999999999865432                       2346889999999999999999999999999887789


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|+++|+++++.|+
T Consensus       156 ~iV~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~  193 (271)
T 4ibo_A          156 KIVNIGSLTSELAR------------------------------------------ATVAPYTVAKGGIKMLTRAMAAEW  193 (271)
T ss_dssp             EEEEECCGGGTSBC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEccHHhCCCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHH
Confidence            99999998876543                                          667899999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCC---CCChhhhhhhhhhhhccCCCCCcceEeccCccCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAG---ILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAP  297 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~---~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~  297 (298)
                        .||+||+|+||+|+|++.....   ..........|+.+...|++.+....|++++.++
T Consensus       194 ~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~  254 (271)
T 4ibo_A          194 AQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASD  254 (271)
T ss_dssp             GGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGT
T ss_pred             hhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence              4899999999999999764210   0001112234555555566666666666555544

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=1.2e-40  Score=295.23  Aligned_cols=190  Identities=27%  Similarity=0.350  Sum_probs=170.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhc-CCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-GVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +..  ++.++++|+++.++++++++.+.
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGA--RLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTC--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCc--eEEEEeCCCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999988888888763 322  38899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +.+|++|+||||||+....+                       +.+.+.++|++.+++|+.++++++++++|.|++++.|
T Consensus        83 ~~~g~id~lvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g  139 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGRVST-----------------------FAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADA  139 (265)
T ss_dssp             HHHCSCSEEEECCCCCCCBC-----------------------TTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTE
T ss_pred             HHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCe
Confidence            99999999999999865432                       2336889999999999999999999999999988889


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|+++|+++++.|+
T Consensus       140 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~  177 (265)
T 3lf2_A          140 AIVCVNSLLASQPE------------------------------------------PHMVATSAARAGVKNLVRSMAFEF  177 (265)
T ss_dssp             EEEEEEEGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCcccCCCC------------------------------------------CCchhhHHHHHHHHHHHHHHHHHh
Confidence            99999998877543                                          668899999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCC
Q 022357          242 --PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~  259 (298)
                        .||+||+|+||+|+|++.
T Consensus       178 ~~~gi~vn~v~PG~v~t~~~  197 (265)
T 3lf2_A          178 APKGVRVNGILIGLVESGQW  197 (265)
T ss_dssp             GGGTEEEEEEEECSBCCHHH
T ss_pred             cccCeEEEEEEeCcCcCchh
Confidence              489999999999999864

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=8e-41  Score=295.02  Aligned_cols=222  Identities=22%  Similarity=0.238  Sum_probs=187.0

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+..   +.++++|+++.++++++++++.
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~~~~   84 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK---AIGLECNVTDEQHREAVIKAAL   84 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEECCCCCHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999999888888888876544   8999999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ++++++|+||||||.....+.                        +.+.++|++.+++|+.|+++++++++|.|++++.|
T Consensus        85 ~~~g~id~lv~nAg~~~~~~~------------------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g  140 (256)
T 3gaf_A           85 DQFGKITVLVNNAGGGGPKPF------------------------DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGG  140 (256)
T ss_dssp             HHHSCCCEEEECCCCCCCCCT------------------------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE
T ss_pred             HHcCCCCEEEECCCCCCCCCC------------------------CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc
Confidence            999999999999998754321                        25788899999999999999999999999988889


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|+++|+++++.|+
T Consensus       141 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~  178 (256)
T 3gaf_A          141 AILNISSMAGENTN------------------------------------------VRMASYGSSKAAVNHLTRNIAFDV  178 (256)
T ss_dssp             EEEEECCGGGTCCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCHHHcCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHH
Confidence            99999998876543                                          667899999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                        .+|+||+|+||+|+|++....                ...+|++.++..+.++.......+|..+..
T Consensus       179 ~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~v  247 (256)
T 3gaf_A          179 GPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTV  247 (256)
T ss_dssp             GGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCccCCEEEE
Confidence              489999999999999864321                123666666666666654444444544443

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=4.1e-39  Score=287.53  Aligned_cols=192  Identities=26%  Similarity=0.318  Sum_probs=169.1

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC------------chhhHHHHHHHHhcCCCCcceeEEEeccC
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD------------EKRGLEAVEKLKASGVDPELLLFHQLDIS   68 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~Dls   68 (298)
                      |+++.+|++|||||++|||+++|++|+++|++|++++|+            .+.+.+..+.+...+..   +.++++|++
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~   81 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRR---CISAKVDVK   81 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCC---EEEEECCTT
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCe---EEEEeCCCC
Confidence            678899999999999999999999999999999999997            44556666666665443   899999999


Q ss_pred             cHHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHH
Q 022357           69 DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC  148 (298)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  148 (298)
                      +.++++++++++.+.+|++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~  138 (281)
T 3s55_A           82 DRAALESFVAEAEDTLGGIDIAITNAGISTIAL-----------------------LPEVESAQWDEVIGTNLTGTFNTI  138 (281)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCC-----------------------TTCCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHH
Confidence            999999999999999999999999999875432                       223588999999999999999999


Q ss_pred             HHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHH
Q 022357          149 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKA  228 (298)
Q Consensus       149 ~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  228 (298)
                      ++++|.|++++.|+||++||..+..+.                                          +....|++||+
T Consensus       139 ~~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~  176 (281)
T 3s55_A          139 AAVAPGMIKRNYGRIVTVSSMLGHSAN------------------------------------------FAQASYVSSKW  176 (281)
T ss_dssp             HHHHHHHHHHTCEEEEEECCGGGGSCC------------------------------------------TTCHHHHHHHH
T ss_pred             HHHHHHHHHcCCCEEEEECChhhcCCC------------------------------------------CCCchhHHHHH
Confidence            999999988778999999998877543                                          66789999999


Q ss_pred             HHHHHHHHHHHhC--CCcEEEEeeCCeeecCCCC
Q 022357          229 VINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       229 al~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      |+++|+++++.|+  .||+||+|+||+|+|++..
T Consensus       177 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~  210 (281)
T 3s55_A          177 GVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTH  210 (281)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTS
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEecCcccCcccc
Confidence            9999999999999  4899999999999999864

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=8.1e-40  Score=288.65  Aligned_cols=223  Identities=21%  Similarity=0.204  Sum_probs=184.1

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..   +.++++|+++.++++++++++.
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~~   78 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQ---ILTVQMDVRNTDDIQKMIEQID   78 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999999888888887655433   8999999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhh-ccCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL-ELSDS  160 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~~~~  160 (298)
                      +++|++|+||||||.....                       ++.+.+.+.|++.+++|+.++++++++++|.| ++++.
T Consensus        79 ~~~g~id~lv~nAg~~~~~-----------------------~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~  135 (257)
T 3imf_A           79 EKFGRIDILINNAAGNFIC-----------------------PAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIK  135 (257)
T ss_dssp             HHHSCCCEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHcCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCC
Confidence            9999999999999976443                       22346889999999999999999999999999 44557


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          ++...|++||+|+++|+++++.|
T Consensus       136 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e  173 (257)
T 3imf_A          136 GNIINMVATYAWDAG------------------------------------------PGVIHSAAAKAGVLAMTKTLAVE  173 (257)
T ss_dssp             CEEEEECCGGGGSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEECchhhccCC------------------------------------------CCcHHHHHHHHHHHHHHHHHHHH
Confidence            999999998876543                                          66789999999999999999999


Q ss_pred             CC---CcEEEEeeCCeeecCCCCCC------------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          241 YP---KFCVNCVCPGFVKTDINFHA------------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       241 ~~---~i~vn~v~PG~v~t~~~~~~------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +.   ||+||+|+||+|+|++....                  ...+|++.++..+.++.......+|..+..
T Consensus       174 ~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~v  246 (257)
T 3imf_A          174 WGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTM  246 (257)
T ss_dssp             HHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEE
Confidence            82   89999999999999864321                  123566666666666654444444444443

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=1.9e-40  Score=291.13  Aligned_cols=220  Identities=26%  Similarity=0.249  Sum_probs=182.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.   ++.++++|+++.++++++++++
T Consensus         1 ~~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dv~~~~~v~~~~~~~   74 (247)
T 3rwb_A            1 TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GK---KARAIAADISDPGSVKALFAEI   74 (247)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CT---TEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC---ceEEEEcCCCCHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999998887777766   22   2889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-  159 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-  159 (298)
                      .+.+|++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|+|++++ 
T Consensus        75 ~~~~g~id~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~  131 (247)
T 3rwb_A           75 QALTGGIDILVNNASIVPFVA-----------------------WDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGK  131 (247)
T ss_dssp             HHHHSCCSEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHCCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence            999999999999999875432                       23468899999999999999999999999998765 


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          +....|++||+|+++|+++++.
T Consensus       132 ~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~  169 (247)
T 3rwb_A          132 AGRVISIASNTFFAGT------------------------------------------PNMAAYVAAKGGVIGFTRALAT  169 (247)
T ss_dssp             CEEEEEECCTHHHHTC------------------------------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEECchhhccCC------------------------------------------CCchhhHHHHHHHHHHHHHHHH
Confidence            6899999998776543                                          6678999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      |+  .+|+||+|+||+|+|++....                ...+|++.++..+.++.......+|..+.
T Consensus       170 e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG~~i~  239 (247)
T 3rwb_A          170 ELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQTLN  239 (247)
T ss_dssp             HHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCCCCEEE
Confidence            98  489999999999999865321                12355555555555554433334444443

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.1e-40  Score=295.77  Aligned_cols=191  Identities=27%  Similarity=0.343  Sum_probs=170.0

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHh-cCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA-SGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |..+.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.. .+..   +.++++|+++.+++++++++
T Consensus        15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~---~~~~~~Dv~~~~~v~~~~~~   91 (266)
T 4egf_A           15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTD---VHTVAIDLAEPDAPAELARR   91 (266)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCC---EEEEECCTTSTTHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCc---EEEEEecCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999988888888876 3333   89999999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.++++++|+||||||+....+                       +.+.+.+.|++.+++|+.++++++++++|.|++++
T Consensus        92 ~~~~~g~id~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~  148 (266)
T 4egf_A           92 AAEAFGGLDVLVNNAGISHPQP-----------------------VVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAG  148 (266)
T ss_dssp             HHHHHTSCSEEEEECCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHcCCCCEEEECCCcCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999875432                       23358899999999999999999999999998765


Q ss_pred             -CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          160 -SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       160 -~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                       .|+||++||..+..+.                                          +....|++||+|+++|+++++
T Consensus       149 ~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~l~~~la  186 (266)
T 4egf_A          149 EGGAIITVASAAALAPL------------------------------------------PDHYAYCTSKAGLVMATKVLA  186 (266)
T ss_dssp             SCEEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEcchhhccCC------------------------------------------CCChHHHHHHHHHHHHHHHHH
Confidence             6899999998876543                                          667899999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCC
Q 022357          239 KRY--PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~  259 (298)
                      .|+  .+|+||+|+||+|+|++.
T Consensus       187 ~e~~~~gI~vn~v~PG~v~T~~~  209 (266)
T 4egf_A          187 RELGPHGIRANSVCPTVVLTEMG  209 (266)
T ss_dssp             HHHGGGTEEEEEEEESCBCSHHH
T ss_pred             HHHhhhCeEEEEEEeCCCcCchh
Confidence            999  489999999999999874

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=6.3e-39  Score=286.27  Aligned_cols=224  Identities=26%  Similarity=0.258  Sum_probs=186.7

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-------------CchhhHHHHHHHHhcCCCCcceeEEEecc
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-------------DEKRGLEAVEKLKASGVDPELLLFHQLDI   67 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl   67 (298)
                      |..+++|++|||||++|||+++|++|+++|++|++++|             +.+++++..+++...+..   +.++++|+
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv   86 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRK---ALTRVLDV   86 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCC---EEEEECCT
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCe---EEEEEcCC
Confidence            56688999999999999999999999999999999998             566677777777765543   88999999


Q ss_pred             CcHHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHH
Q 022357           68 SDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT  147 (298)
Q Consensus        68 s~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l  147 (298)
                      ++.++++++++++.+++|++|+||||||+....                       ++.+.+.+.|++.+++|+.|++++
T Consensus        87 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~~  143 (280)
T 3pgx_A           87 RDDAALRELVADGMEQFGRLDVVVANAGVLSWG-----------------------RVWELTDEQWDTVIGVNLTGTWRT  143 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCB-----------------------CGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC-----------------------CcccCCHHHHHHHHhhhhHHHHHH
Confidence            999999999999999999999999999987543                       223468899999999999999999


Q ss_pred             HHHHhhhhccCC-CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhH
Q 022357          148 CEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVS  226 (298)
Q Consensus       148 ~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  226 (298)
                      +++++|+|++++ .|+||++||..+..+.                                          ++...|++|
T Consensus       144 ~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~as  181 (280)
T 3pgx_A          144 LRATVPAMIEAGNGGSIVVVSSSAGLKAT------------------------------------------PGNGHYSAS  181 (280)
T ss_dssp             HHHHHHHHHHHCSCEEEEEECCGGGTSCC------------------------------------------TTBHHHHHH
T ss_pred             HHHHHHHHHhcCCCCEEEEEcchhhccCC------------------------------------------CCchhHHHH
Confidence            999999998764 6899999998877543                                          668899999


Q ss_pred             HHHHHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCC------------------------CCCCChhhhhhhhhhhhcc
Q 022357          227 KAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH------------------------AGILSVEEGAESPVKLALL  280 (298)
Q Consensus       227 K~al~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~------------------------~~~~~~~~~a~~~~~~~~~  280 (298)
                      |+|+++|+++++.|+  .||+||+|+||+|+|++...                        ..+.+|++.++..+.++..
T Consensus       182 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~  261 (280)
T 3pgx_A          182 KHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGD  261 (280)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhCc
Confidence            999999999999998  48999999999999997542                        0123677777777777665


Q ss_pred             CCCCCcceEecc
Q 022357          281 PDGGPTGRFFLR  292 (298)
Q Consensus       281 ~~~~~~~~~~l~  292 (298)
                      .....+|..+..
T Consensus       262 ~~~~itG~~i~v  273 (280)
T 3pgx_A          262 GSGTLTGTQIPV  273 (280)
T ss_dssp             GGTTCSSCEEEE
T ss_pred             cccCCCCCEEEE
Confidence            444445554443

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=2.2e-39  Score=285.09  Aligned_cols=225  Identities=25%  Similarity=0.283  Sum_probs=189.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEecc--CcHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI--SDLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--s~~~~v~~~~~~~   80 (298)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..  .+.++++|+  ++.++++++++.+
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR--QPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSC--CCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC--CceEEEEecccCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999888888888765432  278899999  9999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+++|++|+||||||+.....                      ++.+.+.+.|++.+++|+.|+++++++++|+|++++.
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~----------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~  144 (252)
T 3f1l_A           87 AVNYPRLDGVLHNAGLLGDVC----------------------PMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDA  144 (252)
T ss_dssp             HHHCSCCSEEEECCCCCCCCS----------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSS
T ss_pred             HHhCCCCCEEEECCccCCCCC----------------------CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCC
Confidence            999999999999999853321                      2223688999999999999999999999999998888


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|+++|+++++.|
T Consensus       145 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~l~~~la~e  182 (252)
T 3f1l_A          145 GSLVFTSSSVGRQGR------------------------------------------ANWGAYAASKFATEGMMQVLADE  182 (252)
T ss_dssp             CEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECChhhccCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHH
Confidence            999999998876543                                          66789999999999999999999


Q ss_pred             C-CCcEEEEeeCCeeecCCCCC-------CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          241 Y-PKFCVNCVCPGFVKTDINFH-------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       241 ~-~~i~vn~v~PG~v~t~~~~~-------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      + +.|+||+|+||+|+|++...       ....+|++.+...+.++.......+|..+..+
T Consensus       183 ~~~~irvn~v~PG~v~t~~~~~~~~~~~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vd  243 (252)
T 3f1l_A          183 YQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQ  243 (252)
T ss_dssp             TTTTCEEEEEECCSBSSHHHHHHCTTCCGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESS
T ss_pred             hcCCcEEEEEecCcccCchhhhhCCccchhccCCHHHHHHHHHHHcCccccCCCCCEEEeC
Confidence            9 45999999999999987422       12346777777777777655555566665544

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.4e-40  Score=292.21  Aligned_cols=189  Identities=26%  Similarity=0.364  Sum_probs=169.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..   +.++++|+++.++++++++++.+
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~~~   84 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR---ALSVGTDITDDAQVAHLVDETMK   84 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999988888876544   89999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||.....                      .++.+.+.+.|++.+++|+.++++++++++|.|++++ |+
T Consensus        85 ~~g~id~lv~nAg~~~~~----------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~  141 (264)
T 3ucx_A           85 AYGRVDVVINNAFRVPSM----------------------KPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GA  141 (264)
T ss_dssp             HTSCCSEEEECCCSCCCC----------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CE
T ss_pred             HcCCCcEEEECCCCCCCC----------------------CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CE
Confidence            999999999999975322                      1233468899999999999999999999999998755 99


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.|+ 
T Consensus       142 iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~  179 (264)
T 3ucx_A          142 VVNVNSMVVRHSQ------------------------------------------AKYGAYKMAKSALLAMSQTLATELG  179 (264)
T ss_dssp             EEEECCGGGGCCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECcchhccCC------------------------------------------CccHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999998876543                                          667899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCC
Q 022357          242 -PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~  259 (298)
                       .+|+||+|+||+|+|++.
T Consensus       180 ~~gi~vn~v~PG~v~t~~~  198 (264)
T 3ucx_A          180 EKGIRVNSVLPGYIWGGTL  198 (264)
T ss_dssp             TTTCEEEEEEESSCBSHHH
T ss_pred             ccCeEEEEEecCccccccH
Confidence             589999999999999864

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.5e-40  Score=292.36  Aligned_cols=193  Identities=26%  Similarity=0.380  Sum_probs=166.2

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |+++++|++|||||++|||+++|++|+++|++|++++| +.+.++...+++......  .+.++++|+++.+++++++++
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~   97 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSG--TVLHHPADMTKPSEIADMMAM   97 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSS--CEEEECCCTTCHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCC--cEEEEeCCCCCHHHHHHHHHH
Confidence            56788999999999999999999999999999999999 555677777777654332  388999999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+++|++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++
T Consensus        98 ~~~~~g~iD~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~  154 (281)
T 3v2h_A           98 VADRFGGADILVNNAGVQFVEK-----------------------IEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG  154 (281)
T ss_dssp             HHHHTSSCSEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHCCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence            9999999999999999865432                       23458899999999999999999999999998888


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          +....|++||+|+++|+++++.
T Consensus       155 ~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~  192 (281)
T 3v2h_A          155 WGRIINIASAHGLVAS------------------------------------------PFKSAYVAAKHGIMGLTKTVAL  192 (281)
T ss_dssp             CEEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCcccccCC------------------------------------------CCchHHHHHHHHHHHHHHHHHH
Confidence            8999999998877543                                          6678999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCC
Q 022357          240 RY--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      |+  .||+||+|+||+|+|++..
T Consensus       193 e~~~~gI~vn~v~PG~v~t~~~~  215 (281)
T 3v2h_A          193 EVAESGVTVNSICPGYVLTPLVE  215 (281)
T ss_dssp             HHGGGTEEEEEEEECSBCC----
T ss_pred             HhhhcCcEEEEEECCCCcCcchh
Confidence            98  4899999999999999754

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=4.4e-40  Score=296.04  Aligned_cols=225  Identities=28%  Similarity=0.262  Sum_probs=187.9

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..  .+.++++|+++.++++++++.+
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~  113 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAG--NVIGVRLDVSDPGSCADAARTV  113 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSS--CEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCC--cEEEEEEeCCCHHHHHHHHHHH
Confidence            56788999999999999999999999999999999999999999988888765422  3899999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+++|++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++.
T Consensus       114 ~~~~g~iD~lvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~  170 (293)
T 3rih_A          114 VDAFGALDVVCANAGIFPEAR-----------------------LDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGR  170 (293)
T ss_dssp             HHHHSCCCEEEECCCCCCCCC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSS
T ss_pred             HHHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence            999999999999999875432                       223588999999999999999999999999988878


Q ss_pred             CcEEEEccCccc-ccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          161 PRLVNLSSYVSA-LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       161 g~iv~vsS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      |+||++||..+. .+.                                          ++...|++||+|+++|+++++.
T Consensus       171 g~iV~isS~~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~  208 (293)
T 3rih_A          171 GRVILTSSITGPVTGY------------------------------------------PGWSHYGASKAAQLGFMRTAAI  208 (293)
T ss_dssp             CEEEEECCSBTTTBBC------------------------------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEeChhhccCCC------------------------------------------CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999998874 332                                          5678999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      |+  .||+||+|+||+|+|++....               ...+|++.+...++++.......+|..+..
T Consensus       209 e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~v  278 (293)
T 3rih_A          209 ELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVV  278 (293)
T ss_dssp             HHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEE
Confidence            98  589999999999999864321               123666666666666654444444444433

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=7.2e-40  Score=287.09  Aligned_cols=220  Identities=29%  Similarity=0.359  Sum_probs=181.6

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +++|++|||||++|||+++|++|+++|++|++++|+ .+++++..++++..+.+   +.++++|+++.++++++++++.+
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~~~~~   78 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVD---SFAIQANVADADEVKAMIKEVVS   78 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHHH
Confidence            568999999999999999999999999999998875 46677777788766543   88999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++.|+
T Consensus        79 ~~g~id~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~  135 (246)
T 3osu_A           79 QFGSLDVLVNNAGITRDNL-----------------------LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGA  135 (246)
T ss_dssp             HHSCCCEEEECCCCCCCCC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             HcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCE
Confidence            9999999999999875432                       22357889999999999999999999999998877899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|++||+|+++|+++++.|+ 
T Consensus       136 iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~  173 (246)
T 3osu_A          136 IINLSSVVGAVGN------------------------------------------PGQANYVATKAGVIGLTKSAARELA  173 (246)
T ss_dssp             EEEECCHHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEEcchhhcCCC------------------------------------------CCChHHHHHHHHHHHHHHHHHHHhc
Confidence            9999998776543                                          667899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCC---------------CCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAG---------------ILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                       .+|+||+|+||+|+|++.....               ..+|++.++..+.++.......+|..+.
T Consensus       174 ~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~  239 (246)
T 3osu_A          174 SRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIH  239 (246)
T ss_dssp             GGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             ccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEE
Confidence             4899999999999999865321               2255566666555555443444444443

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=5.9e-40  Score=293.11  Aligned_cols=226  Identities=20%  Similarity=0.217  Sum_probs=189.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.....+.++++|+++.++++++++++.+
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA   87 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999887655444589999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||......                      ++.+.+.+.|++.+++|+.|+++++++++|.|.+++.|+
T Consensus        88 ~~g~id~lv~nAg~~~~~~----------------------~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~  145 (281)
T 3svt_A           88 WHGRLHGVVHCAGGSENIG----------------------PITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGS  145 (281)
T ss_dssp             HHSCCCEEEECCCCCCCCC----------------------CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred             HcCCCCEEEECCCcCCCCC----------------------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcE
Confidence            9999999999999743221                      223468899999999999999999999999999888899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.|+ 
T Consensus       146 iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~l~~~la~e~~  183 (281)
T 3svt_A          146 FVGISSIAASNTH------------------------------------------RWFGAYGVTKSAVDHLMQLAADELG  183 (281)
T ss_dssp             EEEECCHHHHSCC------------------------------------------TTCTHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEEeCHHHcCCC------------------------------------------CCChhHHHHHHHHHHHHHHHHHHhh
Confidence            9999998776443                                          667899999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                       .+|+||+|+||+|+|++....                 ...+|++.++..+.++.......+|..+..
T Consensus       184 ~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~v  252 (281)
T 3svt_A          184 ASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTGQVINV  252 (281)
T ss_dssp             GGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEe
Confidence             489999999999999976321                 123677777777766654444444444433

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.5e-38  Score=284.55  Aligned_cols=192  Identities=23%  Similarity=0.265  Sum_probs=167.8

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC----------------chhhHHHHHHHHhcCCCCcceeEEEe
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD----------------EKRGLEAVEKLKASGVDPELLLFHQL   65 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~   65 (298)
                      ..+.+|++|||||++|||+++|++|+++|++|++++|+                .+++++..+++...+..   +.++++
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~   83 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRR---IVTAEV   83 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCC---EEEEEC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCc---eEEEEc
Confidence            35789999999999999999999999999999999987                55666666666655433   899999


Q ss_pred             ccCcHHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHH
Q 022357           66 DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTK  145 (298)
Q Consensus        66 Dls~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~  145 (298)
                      |+++.++++++++++.+++|++|+||||||+......                      +.+.+.++|++.+++|+.|++
T Consensus        84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~----------------------~~~~~~~~~~~~~~~N~~g~~  141 (286)
T 3uve_A           84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDT----------------------LDKTSEEDWTEMIDINLAGVW  141 (286)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSC----------------------GGGCCHHHHHHHHHHHTHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCc----------------------cccCCHHHHHHHHHHhhHHHH
Confidence            9999999999999999999999999999998654321                      223588999999999999999


Q ss_pred             HHHHHHhhhhccCC-CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhh
Q 022357          146 QTCEALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYK  224 (298)
Q Consensus       146 ~l~~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  224 (298)
                      +++++++|+|++++ .|+||++||..+..+.                                          +....|+
T Consensus       142 ~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~  179 (286)
T 3uve_A          142 KTVKAGVPHMIAGGRGGSIILTSSVGGLKAY------------------------------------------PHTGHYV  179 (286)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------------------------------------TTCHHHH
T ss_pred             HHHHHHHHHHHhCCCCcEEEEECchhhccCC------------------------------------------CCccHHH
Confidence            99999999998754 6899999998877543                                          6678999


Q ss_pred             hHHHHHHHHHHHHHHhC--CCcEEEEeeCCeeecCCCC
Q 022357          225 VSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       225 ~sK~al~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      +||+|+++|+++++.|+  .+|+||+|+||+|+|++..
T Consensus       180 asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~  217 (286)
T 3uve_A          180 AAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLH  217 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTS
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCccc
Confidence            99999999999999999  4899999999999999864

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=9.9e-39  Score=281.07  Aligned_cols=214  Identities=15%  Similarity=0.126  Sum_probs=177.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+++++..++++..+.   ++.++++|+++.++++++++.+.+
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG---RIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC---EEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEECcCCCHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999999999999999987654   389999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      . +++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++.|+
T Consensus        81 ~-g~id~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~  136 (252)
T 3h7a_A           81 H-APLEVTIFNVGANVNFP-----------------------ILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGK  136 (252)
T ss_dssp             H-SCEEEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             h-CCceEEEECCCcCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcE
Confidence            9 99999999999875432                       23468899999999999999999999999998877899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|++||+|+++|+++++.|+ 
T Consensus       137 iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~  174 (252)
T 3h7a_A          137 IFFTGATASLRGG------------------------------------------SGFAAFASAKFGLRAVAQSMARELM  174 (252)
T ss_dssp             EEEEEEGGGTCCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEECCHHHcCCC------------------------------------------CCCccHHHHHHHHHHHHHHHHHHhh
Confidence            9999998877543                                          668899999999999999999999 


Q ss_pred             -CCcEE-EEeeCCeeecCCCCCC--------------CCCChhhhhhhhhhhhccCCCCC
Q 022357          242 -PKFCV-NCVCPGFVKTDINFHA--------------GILSVEEGAESPVKLALLPDGGP  285 (298)
Q Consensus       242 -~~i~v-n~v~PG~v~t~~~~~~--------------~~~~~~~~a~~~~~~~~~~~~~~  285 (298)
                       .+|+| |+|+||+|+|++....              ...+|++.++..+.++..+....
T Consensus       175 ~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~~~~l~s~~~~~~  234 (252)
T 3h7a_A          175 PKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDLLMPPAAVAGAYWQLYQQPKSAW  234 (252)
T ss_dssp             GGTEEEEEEEEC---------------------------CCHHHHHHHHHHHHHCCGGGB
T ss_pred             hcCCEEEEEecCCccCChhhhccchhhhhhhhhcCCccCCCHHHHHHHHHHHHhCchhcc
Confidence             48999 9999999999986431              24578888888888777555333

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.8e-40  Score=291.84  Aligned_cols=225  Identities=28%  Similarity=0.373  Sum_probs=173.1

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |..+.+|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++...+..   +.++++|+++.+++++++++
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~~  100 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGAR---VIFLRADLADLSSHQATVDA  100 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCC---EEEEECCTTSGGGHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCc---EEEEEecCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999995 666778888888766543   89999999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+++|++|+||||||+....                     ..++.+.+.++|++.+++|+.|+++++++++|.|++++
T Consensus       101 ~~~~~g~iD~lvnnAg~~~~~---------------------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~  159 (280)
T 4da9_A          101 VVAEFGRIDCLVNNAGIASIV---------------------RDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASD  159 (280)
T ss_dssp             HHHHHSCCCEEEEECC---------------------------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHcCCCCEEEECCCccccC---------------------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhC
Confidence            999999999999999984211                     01233468899999999999999999999999998654


Q ss_pred             ---CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHH
Q 022357          160 ---SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI  236 (298)
Q Consensus       160 ---~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~  236 (298)
                         .|+||++||..+..+.                                          +....|++||+|+++|+++
T Consensus       160 ~~~~g~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~  197 (280)
T 4da9_A          160 ARASRSIINITSVSAVMTS------------------------------------------PERLDYCMSKAGLAAFSQG  197 (280)
T ss_dssp             CCCCEEEEEECCC-------------------------------------------------CCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEcchhhccCC------------------------------------------CCccHHHHHHHHHHHHHHH
Confidence               6899999998876543                                          6678999999999999999


Q ss_pred             HHHhC--CCcEEEEeeCCeeecCCCCCCC----------------CCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          237 LAKRY--PKFCVNCVCPGFVKTDINFHAG----------------ILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       237 la~e~--~~i~vn~v~PG~v~t~~~~~~~----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      ++.|+  .+|+||+|+||+|+|++.....                +.+|++.++..+.++.......+|..+.
T Consensus       198 la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~  270 (280)
T 4da9_A          198 LALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQ  270 (280)
T ss_dssp             HHHHHTTTTEEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEE
T ss_pred             HHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCccccCCCCCEEE
Confidence            99998  4899999999999999864321                1245566665555555433334444443

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=2.2e-39  Score=285.76  Aligned_cols=187  Identities=28%  Similarity=0.368  Sum_probs=166.0

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+.+|++|||||++|||+++|++|+++|++|++++|+++++++..+++..      ++.++++|+++.++++++++.+
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~   76 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGP------RVHALRSDIADLNEIAVLGAAA   76 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC------cceEEEccCCCHHHHHHHHHHH
Confidence            5568899999999999999999999999999999999998888777776621      3889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||+....                       ++.+.+.++|++.+++|+.++++++++++|+|++  .
T Consensus        77 ~~~~g~id~lv~nAg~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~  131 (255)
T 4eso_A           77 GQTLGAIDLLHINAGVSELE-----------------------PFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--G  131 (255)
T ss_dssp             HHHHSSEEEEEECCCCCCCB-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--E
T ss_pred             HHHhCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--C
Confidence            99999999999999987543                       2234688999999999999999999999999975  4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          ++...|++||+|+++|+++++.|
T Consensus       132 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e  169 (255)
T 4eso_A          132 GSIVFTSSVADEGGH------------------------------------------PGMSVYSASKAALVSFASVLAAE  169 (255)
T ss_dssp             EEEEEECCGGGSSBC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECChhhcCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHH
Confidence            899999998876543                                          66889999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      +  .||+||+|+||+|+|++..
T Consensus       170 ~~~~gi~vn~v~PG~v~T~~~~  191 (255)
T 4eso_A          170 LLPRGIRVNSVSPGFIDTPTKG  191 (255)
T ss_dssp             TGGGTCEEEEEEECSBCCSSTT
T ss_pred             HhhhCcEEEEEecCcccCcccc
Confidence            9  4899999999999999864

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-38  Score=284.04  Aligned_cols=223  Identities=22%  Similarity=0.218  Sum_probs=186.8

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-------------CchhhHHHHHHHHhcCCCCcceeEEEeccC
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-------------DEKRGLEAVEKLKASGVDPELLLFHQLDIS   68 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls   68 (298)
                      ..+.+|++|||||++|||+++|++|+++|++|++++|             +.+.+.+..+++...+..   +.++++|++
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~D~~   83 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRR---IVAAVVDTR   83 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCC---EEEEECCTT
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCe---EEEEECCCC
Confidence            3578999999999999999999999999999999998             556667777777665443   899999999


Q ss_pred             cHHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHH
Q 022357           69 DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC  148 (298)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  148 (298)
                      +.++++++++++.++++++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++
T Consensus        84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~  140 (277)
T 3tsc_A           84 DFDRLRKVVDDGVAALGRLDIIVANAGVAAPQA-----------------------WDDITPEDFRDVMDINVTGTWNTV  140 (277)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHhHHHHHHHH
Confidence            999999999999999999999999999875432                       234688999999999999999999


Q ss_pred             HHHhhhhccCC-CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHH
Q 022357          149 EALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSK  227 (298)
Q Consensus       149 ~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  227 (298)
                      ++++|.|++++ .|+||++||..+..+.                                          +....|++||
T Consensus       141 ~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK  178 (277)
T 3tsc_A          141 MAGAPRIIEGGRGGSIILISSAAGMKMQ------------------------------------------PFMIHYTASK  178 (277)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCGGGTSCC------------------------------------------SSCHHHHHHH
T ss_pred             HHHHHHHHhcCCCCEEEEEccHhhCCCC------------------------------------------CCchhhHHHH
Confidence            99999998765 6899999998876543                                          6678999999


Q ss_pred             HHHHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCC-------------------------CCCCChhhhhhhhhhhhcc
Q 022357          228 AVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH-------------------------AGILSVEEGAESPVKLALL  280 (298)
Q Consensus       228 ~al~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~-------------------------~~~~~~~~~a~~~~~~~~~  280 (298)
                      +|+++|+++++.|+  .+|+||+|+||+|+|++...                         ....+|++.++..++++..
T Consensus       179 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~  258 (277)
T 3tsc_A          179 HAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASD  258 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCc
Confidence            99999999999999  48999999999999997532                         0134678888887777765


Q ss_pred             CCCCCcceEecc
Q 022357          281 PDGGPTGRFFLR  292 (298)
Q Consensus       281 ~~~~~~~~~~l~  292 (298)
                      .....+|..+..
T Consensus       259 ~~~~itG~~i~v  270 (277)
T 3tsc_A          259 ESRKVTAAQIPV  270 (277)
T ss_dssp             GGTTCCSCEEEE
T ss_pred             cccCCcCCEEee
Confidence            555555555443

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.1e-39  Score=287.91  Aligned_cols=188  Identities=23%  Similarity=0.269  Sum_probs=166.4

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.   .   .+.++++|+++.++++++++++
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~~~D~~~~~~v~~~~~~~   76 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG---P---AAYAVQMDVTRQDSIDAAIAAT   76 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---T---TEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---C---CceEEEeeCCCHHHHHHHHHHH
Confidence            456889999999999999999999999999999999999888877777662   1   2789999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-  159 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-  159 (298)
                      .+++|++|+||||||+....+                       +.+.+.+.|++.+++|+.|+++++++++|.|.+++ 
T Consensus        77 ~~~~g~id~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~  133 (259)
T 4e6p_A           77 VEHAGGLDILVNNAALFDLAP-----------------------IVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGR  133 (259)
T ss_dssp             HHHSSSCCEEEECCCCCCCBC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHcCCCCEEEECCCcCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999865432                       23468899999999999999999999999997655 


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          +....|++||+|+++|+++++.
T Consensus       134 ~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~  171 (259)
T 4e6p_A          134 GGKIINMASQAGRRGE------------------------------------------ALVAIYCATKAAVISLTQSAGL  171 (259)
T ss_dssp             CEEEEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEECChhhccCC------------------------------------------CCChHHHHHHHHHHHHHHHHHH
Confidence            6899999998876543                                          6678999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCC
Q 022357          240 RY--PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~  259 (298)
                      |+  .+|+||+|+||+|+|++.
T Consensus       172 e~~~~gi~vn~v~PG~v~t~~~  193 (259)
T 4e6p_A          172 DLIKHRINVNAIAPGVVDGEHW  193 (259)
T ss_dssp             HHGGGTEEEEEEEECCBCSTTH
T ss_pred             HhhhcCCEEEEEEECCCccchh
Confidence            98  489999999999999975

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=3.8e-40  Score=293.04  Aligned_cols=223  Identities=28%  Similarity=0.358  Sum_probs=189.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+..   +.++++|+++.++++++++++.+
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~~~~~  101 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE---GRGAVLNVNDATAVDALVESTLK  101 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCC---CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEEEeCCCHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999888888888876544   78899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++.|+
T Consensus       102 ~~g~iD~lvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~  158 (270)
T 3ftp_A          102 EFGALNVLVNNAGITQDQL-----------------------AMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGR  158 (270)
T ss_dssp             HHSCCCEEEECCCCCCCBC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             HcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCE
Confidence            9999999999999875432                       22357889999999999999999999999998877899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|++||+|+++|+++++.|+ 
T Consensus       159 iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~  196 (270)
T 3ftp_A          159 IVNITSVVGSAGN------------------------------------------PGQVNYAAAKAGVAGMTRALAREIG  196 (270)
T ss_dssp             EEEECCHHHHHCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEECchhhCCCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHHh
Confidence            9999998776543                                          667899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                       .+|+||+|+||+|+|++....               ...+|++.++..+.++.......+|..+..+
T Consensus       197 ~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd  264 (270)
T 3ftp_A          197 SRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVN  264 (270)
T ss_dssp             GGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccCcEEEEC
Confidence             589999999999999875321               1347788888877777654455566655543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=3.5e-40  Score=292.71  Aligned_cols=220  Identities=27%  Similarity=0.338  Sum_probs=175.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.   .+.++++|+++.++++++++.+
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dv~d~~~v~~~~~~~   95 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GK---DVFVFSANLSDRKSIKQLAEVA   95 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CS---SEEEEECCTTSHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC---ceEEEEeecCCHHHHHHHHHHH
Confidence            66788999999999999999999999999999999999988877766554   22   2889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .++++++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++.
T Consensus        96 ~~~~g~iD~lvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~  152 (266)
T 3grp_A           96 EREMEGIDILVNNAGITRDGL-----------------------FVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRY  152 (266)
T ss_dssp             HHHHTSCCEEEECCCCC----------------------------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            999999999999999875432                       223578899999999999999999999999988778


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          ++...|++||+|+++|+++++.|
T Consensus       153 g~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e  190 (266)
T 3grp_A          153 GRIINITSIVGVVGN------------------------------------------PGQTNYCAAKAGLIGFSKALAQE  190 (266)
T ss_dssp             EEEEEECCC-------------------------------------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEECCHHHcCCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHH
Confidence            999999998876543                                          56788999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCC---------------CCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAG---------------ILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      +  .+|+||+|+||+|+|++.....               ..+|++.++..+.++.......+|..+.
T Consensus       191 ~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~  258 (266)
T 3grp_A          191 IASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQTLH  258 (266)
T ss_dssp             HGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEE
Confidence            8  4899999999999998754321               2245555555555554433333444433

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=2.9e-38  Score=284.74  Aligned_cols=191  Identities=25%  Similarity=0.283  Sum_probs=168.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC------------chhhHHHHHHHHhcCCCCcceeEEEeccCcH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD------------EKRGLEAVEKLKASGVDPELLLFHQLDISDL   70 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~   70 (298)
                      .+.+|++|||||++|||+++|++|+++|++|++++|+            .+++.+..+++...+..   +.++++|+++.
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~  101 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRR---IIASQVDVRDF  101 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCC---EEEEECCTTCH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCc---eEEEECCCCCH
Confidence            4789999999999999999999999999999999987            55677777777766543   89999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHH
Q 022357           71 ASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEA  150 (298)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~  150 (298)
                      ++++++++++.+.+|++|+||||||+......                      +.+.+.++|++.+++|+.|+++++++
T Consensus       102 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~  159 (299)
T 3t7c_A          102 DAMQAAVDDGVTQLGRLDIVLANAALASEGTR----------------------LNRMDPKTWRDMIDVNLNGAWITARV  159 (299)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCC----------------------TTTCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCc----------------------hhhCCHHHHHHHHHHhhHHHHHHHHH
Confidence            99999999999999999999999998754321                      22358899999999999999999999


Q ss_pred             HhhhhccCC-CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHH
Q 022357          151 LIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAV  229 (298)
Q Consensus       151 ~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a  229 (298)
                      ++|.|.+++ .|+||++||..+..+.                                          +....|++||+|
T Consensus       160 ~~~~~~~~~~~g~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa  197 (299)
T 3t7c_A          160 AIPHIMAGKRGGSIVFTSSIGGLRGA------------------------------------------ENIGNYIASKHG  197 (299)
T ss_dssp             HHHHHHHTTSCEEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHH
T ss_pred             HHHHHHhcCCCcEEEEECChhhccCC------------------------------------------CCcchHHHHHHH
Confidence            999987664 6899999998877543                                          668899999999


Q ss_pred             HHHHHHHHHHhC--CCcEEEEeeCCeeecCCCC
Q 022357          230 INAYTRILAKRY--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       230 l~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      +++|+++++.|+  .||+||+|+||+|+|++..
T Consensus       198 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  230 (299)
T 3t7c_A          198 LHGLMRTMALELGPRNIRVNIVCPSSVATPMLL  230 (299)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCCccCcccc
Confidence            999999999999  4899999999999999864

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.1e-39  Score=290.37  Aligned_cols=220  Identities=23%  Similarity=0.270  Sum_probs=179.0

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.   .   .+.++++|+++.++++++++.+
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~~~Dv~d~~~v~~~~~~~   96 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG---D---DALCVPTDVTDPDSVRALFTAT   96 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT---S---CCEEEECCTTSHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---C---CeEEEEecCCCHHHHHHHHHHH
Confidence            666789999999999999999999999999999999999988887777763   1   2889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-  159 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-  159 (298)
                      .+++|++|+||||||+.....                      ++.+.+.++|++.+++|+.|+++++++++|.|++++ 
T Consensus        97 ~~~~g~iD~lVnnAg~~~~~~----------------------~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~  154 (272)
T 4dyv_A           97 VEKFGRVDVLFNNAGTGAPAI----------------------PMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEP  154 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCSS----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS
T ss_pred             HHHcCCCCEEEECCCCCCCCC----------------------ChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC
Confidence            999999999999999864321                      223468899999999999999999999999998765 


Q ss_pred             -CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          160 -SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       160 -~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                       .|+||++||..+..+.                                          ++...|++||+|+++|+++++
T Consensus       155 ~~g~IV~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la  192 (272)
T 4dyv_A          155 RGGRIINNGSISATSPR------------------------------------------PYSAPYTATKHAITGLTKSTS  192 (272)
T ss_dssp             CCEEEEEECCSSTTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECchhhcCCC------------------------------------------CCchHHHHHHHHHHHHHHHHH
Confidence             6899999998887543                                          667899999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCC--------------CCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHA--------------GILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~--------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      .|+  .+|+||+|+||+|+|++....              ...+|++.++..++++..+.......+.
T Consensus       193 ~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~~~~i~  260 (272)
T 4dyv_A          193 LDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYMASLPLDANVQFMT  260 (272)
T ss_dssp             HHHGGGTEEEEEEEEEECC------------------------CHHHHHHHHHHHHHSCTTSCCCEEE
T ss_pred             HHhCccCEEEEEEEECcccChhhhhhcccchhhhhcccccCCCCHHHHHHHHHHHhCCCCcCccceEE
Confidence            998  589999999999999986432              2457888888888888876655444333

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1.8e-39  Score=286.81  Aligned_cols=223  Identities=26%  Similarity=0.278  Sum_probs=177.1

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |+.+.+|++|||||++|||+++|++|+++|++|+++ .|+.+......+++...+..   +.++++|+++.+++++++++
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~   79 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRS---ALAIKADLTNAAEVEAAISA   79 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSC---CEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc---eEEEEcCCCCHHHHHHHHHH
Confidence            345789999999999999999999999999999998 55666677777777765543   88999999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+++|++|+||||||......                      ++.+.+.+.|++.+++|+.|+++++++++|.|++  
T Consensus        80 ~~~~~g~id~lv~nAg~~~~~~----------------------~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--  135 (259)
T 3edm_A           80 AADKFGEIHGLVHVAGGLIARK----------------------TIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--  135 (259)
T ss_dssp             HHHHHCSEEEEEECCCCCCCCC----------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--
T ss_pred             HHHHhCCCCEEEECCCccCCCC----------------------ChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence            9999999999999999763221                      1223588999999999999999999999999975  


Q ss_pred             CCcEEEEccCccc-ccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSA-LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       160 ~g~iv~vsS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                      .|+||++||..+. .+                                          .++...|++||+|+++|+++++
T Consensus       136 ~g~iv~isS~~~~~~~------------------------------------------~~~~~~Y~asKaa~~~l~~~la  173 (259)
T 3edm_A          136 GGAIVTFSSQAGRDGG------------------------------------------GPGALAYATSKGAVMTFTRGLA  173 (259)
T ss_dssp             EEEEEEECCHHHHHCC------------------------------------------STTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEcCHHhccCC------------------------------------------CCCcHHHHHHHHHHHHHHHHHH
Confidence            5899999997765 22                                          2667899999999999999999


Q ss_pred             HhC-CCcEEEEeeCCeeecCCCCCCC----------------CCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          239 KRY-PKFCVNCVCPGFVKTDINFHAG----------------ILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       239 ~e~-~~i~vn~v~PG~v~t~~~~~~~----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      .|+ ++|+||+|+||+|+|++.....                ..+|++.++..+.++.......+|..+..
T Consensus       174 ~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~v  244 (259)
T 3edm_A          174 KEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDI  244 (259)
T ss_dssp             HHHTTTCEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHCCCCEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEE
Confidence            998 5699999999999999864321                23566666666666654444444544443

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=9.8e-40  Score=290.20  Aligned_cols=223  Identities=27%  Similarity=0.332  Sum_probs=186.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++...+..   +.++++|+++.++++++++++.
T Consensus        25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~D~~d~~~v~~~~~~~~  101 (269)
T 4dmm_A           25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGE---AFAVKADVSQESEVEALFAAVI  101 (269)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCc---EEEEECCCCCHHHHHHHHHHHH
Confidence            467999999999999999999999999999999998 555677777777765543   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++.|
T Consensus       102 ~~~g~id~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g  158 (269)
T 4dmm_A          102 ERWGRLDVLVNNAGITRDTL-----------------------LLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSG  158 (269)
T ss_dssp             HHHSCCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc
Confidence            99999999999999875432                       2236889999999999999999999999999887789


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          ++...|++||+|+++|+++++.|+
T Consensus       159 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~l~~~la~e~  196 (269)
T 4dmm_A          159 RIINIASVVGEMGN------------------------------------------PGQANYSAAKAGVIGLTKTVAKEL  196 (269)
T ss_dssp             EEEEECCHHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECchhhcCCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHH
Confidence            99999998776443                                          667899999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC------------CCCChhhhhhhhhhhhccC-CCCCcceEeccC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA------------GILSVEEGAESPVKLALLP-DGGPTGRFFLRK  293 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~------------~~~~~~~~a~~~~~~~~~~-~~~~~~~~~l~~  293 (298)
                        .||+||+|+||+|+|++....            ...+|++.++..+.++..+ ....+|..+..+
T Consensus       197 ~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vd  263 (269)
T 4dmm_A          197 ASRGITVNAVAPGFIATDMTSELAAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINID  263 (269)
T ss_dssp             GGGTCEEEEEEECCBTTSCSCHHHHHHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEES
T ss_pred             hhhCcEEEEEEECCCcCcccccccHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEEC
Confidence              489999999999999986431            2347788888777777653 233455555443

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=6.4e-40  Score=292.47  Aligned_cols=190  Identities=23%  Similarity=0.265  Sum_probs=168.3

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++.+..+++....+.  ++.++++|+++.++++++++++.
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~  100 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGR--RCLPLSMDVRAPPAVMAAVDQAL  100 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSS--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888888887653222  28999999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|++|+||||||.....                       ++.+.+.+.|++.+++|+.|+++++++++|.|++++.|
T Consensus       101 ~~~g~id~lv~nAg~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g  157 (277)
T 4fc7_A          101 KEFGRIDILINCAAGNFLC-----------------------PAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGG  157 (277)
T ss_dssp             HHHSCCCEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCE
T ss_pred             HHcCCCCEEEECCcCCCCC-----------------------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC
Confidence            9999999999999976433                       22346889999999999999999999999999877779


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|+++|+++++.|+
T Consensus       158 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~  195 (277)
T 4fc7_A          158 VIVNITATLGNRGQ------------------------------------------ALQVHAGSAKAAVDAMTRHLAVEW  195 (277)
T ss_dssp             EEEEECCSHHHHTC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECchhhCCCC------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHh
Confidence            99999998876543                                          667899999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCC
Q 022357          242 --PKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~  258 (298)
                        .||+||+|+||+|+|++
T Consensus       196 ~~~gi~vn~v~PG~v~t~~  214 (277)
T 4fc7_A          196 GPQNIRVNSLAPGPISGTE  214 (277)
T ss_dssp             GGGTEEEEEEEECCBSSSH
T ss_pred             hhcCeEEEEEEECCEecch
Confidence              48999999999999985

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=7.7e-40  Score=292.31  Aligned_cols=189  Identities=28%  Similarity=0.356  Sum_probs=166.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..   +.++++|+++.++++++++++.+
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dv~d~~~v~~~~~~~~~   97 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD---VDGSSCDVTSTDEVHAAVAAAVE   97 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEECCCCCHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999988888888876543   89999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhh--hhccCCC
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP--LLELSDS  160 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~--~~~~~~~  160 (298)
                      ++|++|+||||||.....+                       +.+.+.+.|++.+++|+.|+++++++++|  .|++++.
T Consensus        98 ~~g~id~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~  154 (279)
T 3sju_A           98 RFGPIGILVNSAGRNGGGE-----------------------TADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGW  154 (279)
T ss_dssp             HHCSCCEEEECCCCCCCSC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTC
T ss_pred             HcCCCcEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCC
Confidence            9999999999999875432                       22358899999999999999999999999  6777777


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|+++|+++++.|
T Consensus       155 g~iV~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e  192 (279)
T 3sju_A          155 GRIVNIASTGGKQGV------------------------------------------MYAAPYTASKHGVVGFTKSVGFE  192 (279)
T ss_dssp             EEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEECChhhccCC------------------------------------------CCChhHHHHHHHHHHHHHHHHHH
Confidence            999999998876543                                          66789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~  259 (298)
                      +  .||+||+|+||+|+|++.
T Consensus       193 ~~~~gi~vn~v~PG~v~T~~~  213 (279)
T 3sju_A          193 LAKTGITVNAVCPGYVETPMA  213 (279)
T ss_dssp             TGGGTEEEEEEEESSBCSHHH
T ss_pred             HHhhCcEEEEEeeCcccchHH
Confidence            9  489999999999999874

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=5.3e-38  Score=277.69  Aligned_cols=225  Identities=25%  Similarity=0.298  Sum_probs=189.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..   +.++++|+++.++++++++.+
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~v~~~~~~~  100 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGE---AESHACDLSHSDAIAAFATGV  100 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCE---EEEEECCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCc---eeEEEecCCCHHHHHHHHHHH
Confidence            67788999999999999999999999999999999999999988888888876543   889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||......                      ++.+.+.+.|++.+++|+.|+++++++++|.|++++.
T Consensus       101 ~~~~g~id~lv~~Ag~~~~~~----------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~  158 (262)
T 3rkr_A          101 LAAHGRCDVLVNNAGVGWFGG----------------------PLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKR  158 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCCSS----------------------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred             HHhcCCCCEEEECCCccCCCC----------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence            999999999999999843221                      1223578899999999999999999999999988888


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|+++|+++++.+
T Consensus       159 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e  196 (262)
T 3rkr_A          159 GHIINISSLAGKNPV------------------------------------------ADGAAYTASKWGLNGLMTSAAEE  196 (262)
T ss_dssp             CEEEEECSSCSSCCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEechhhcCCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHH
Confidence            999999998887543                                          66789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCC-------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHA-------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~-------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +  .+|+||+|+||+|+|++....       ...+|++.++..+.++..+.....+..++.
T Consensus       197 ~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~~~~~~~g~~~i~  257 (262)
T 3rkr_A          197 LRQHQVRVSLVAPGSVRTEFGVGLSAKKSALGAIEPDDIADVVALLATQADQSFISEVLVR  257 (262)
T ss_dssp             HGGGTCEEEEEEECCC----------------CCCHHHHHHHHHHHHTCCTTCCEEEEEEE
T ss_pred             hhhcCcEEEEEecCCCcCCcccccccccccccCCCHHHHHHHHHHHhcCccccccCcEEec
Confidence            8  589999999999999986432       356899999999998887666666665544

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.3e-39  Score=284.25  Aligned_cols=190  Identities=27%  Similarity=0.308  Sum_probs=165.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+.+|++|||||++|||+++|++|+++|++|++++++. +.++...++++..+..   +.++++|+++.++++++++++.
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~Dv~d~~~v~~~~~~~~  104 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGR---AVAIRADNRDAEAIEQAIRETV  104 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc---EEEEECCCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999997664 5677777777766543   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|++|+||||||+....                       ++.+.+.++|++.+++|+.|+++++++++|.|++  .|
T Consensus       105 ~~~g~iD~lvnnAg~~~~~-----------------------~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g  159 (271)
T 3v2g_A          105 EALGGLDILVNSAGIWHSA-----------------------PLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GG  159 (271)
T ss_dssp             HHHSCCCEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TC
T ss_pred             HHcCCCcEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CC
Confidence            9999999999999986543                       2234688999999999999999999999999964  58


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+...                                         +.++...|++||+|+++|+++++.|+
T Consensus       160 ~iv~isS~~~~~~-----------------------------------------~~~~~~~Y~asKaa~~~l~~~la~e~  198 (271)
T 3v2g_A          160 RIITIGSNLAELV-----------------------------------------PWPGISLYSASKAALAGLTKGLARDL  198 (271)
T ss_dssp             EEEEECCGGGTCC-----------------------------------------CSTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeChhhccC-----------------------------------------CCCCchHHHHHHHHHHHHHHHHHHHh
Confidence            9999999766532                                         12667899999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFH  261 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~  261 (298)
                        .+|+||+|+||+|+|++...
T Consensus       199 ~~~gIrvn~v~PG~v~T~~~~~  220 (271)
T 3v2g_A          199 GPRGITVNIVHPGSTDTDMNPA  220 (271)
T ss_dssp             GGGTCEEEEEEECSBCSSSSCS
T ss_pred             hhhCeEEEEEecCCCcCCcccc
Confidence              48999999999999998754

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.2e-38  Score=280.23  Aligned_cols=217  Identities=21%  Similarity=0.280  Sum_probs=181.1

Q ss_pred             CC-cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MA-EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~-~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |+ .+.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.........+.++++|+++.+++++++++
T Consensus         1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            1 MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             ----CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence            54 46789999999999999999999999999999999999999888888876532223488999999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.++++++|+||||||+......                        +.+.+.|++.+++|+.|+++++++++|.|++++
T Consensus        81 ~~~~~g~iD~lvnnAg~~~~~~~------------------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~  136 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMFMDGSL------------------------SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK  136 (250)
T ss_dssp             HHHHHCCEEEEEECCCCCCCCCC------------------------SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             HHHhcCCCCEEEECCCcCCCCCC------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999999998654321                        247789999999999999999999999998877


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          +....|++||+|+++|+++++.
T Consensus       137 ~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~  174 (250)
T 3nyw_A          137 NGYIFNVASRAAKYGF------------------------------------------ADGGIYGSTKFALLGLAESLYR  174 (250)
T ss_dssp             CEEEEEECC-------------------------------------------------CCTTHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEccHHhcCCC------------------------------------------CCCcchHHHHHHHHHHHHHHHH
Confidence            8999999998876432                                          3478999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCC-------CCCChhhhhhhhhhhhccCCC
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHA-------GILSVEEGAESPVKLALLPDG  283 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~-------~~~~~~~~a~~~~~~~~~~~~  283 (298)
                      |+  .||+||+|+||+|+|++....       .+.+|++.++..+.++..+..
T Consensus       175 e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~~  227 (250)
T 3nyw_A          175 ELAPLGIRVTTLCPGWVNTDMAKKAGTPFKDEEMIQPDDLLNTIRCLLNLSEN  227 (250)
T ss_dssp             HHGGGTEEEEEEEESSBCSHHHHHTTCCSCGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             HhhhcCcEEEEEecCcccCchhhhcCCCcccccCCCHHHHHHHHHHHHcCCCc
Confidence            99  489999999999999875321       246889999988888876553

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-39  Score=291.22  Aligned_cols=215  Identities=23%  Similarity=0.279  Sum_probs=179.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+...  +.++++|+++.++++++++.+.+
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNI--VRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSC--EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCe--EEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888888887654432  68999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC--C
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--S  160 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~  160 (298)
                      ++|++|+||||||......                      ++.+.+.++|++.+++|+.|+++++++++|.|++++  .
T Consensus       108 ~~g~iD~lvnnAG~~~~~~----------------------~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~  165 (281)
T 4dry_A          108 EFARLDLLVNNAGSNVPPV----------------------PLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRG  165 (281)
T ss_dssp             HHSCCSEEEECCCCCCCCC----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCC
T ss_pred             HcCCCCEEEECCCCCCCCC----------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Confidence            9999999999999864321                      223468899999999999999999999999998764  6


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          ++...|++||+|+++|+++++.|
T Consensus       166 g~IV~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e  203 (281)
T 4dry_A          166 GRIINNGSISAQTPR------------------------------------------PNSAPYTATKHAITGLTKSTALD  203 (281)
T ss_dssp             EEEEEECCGGGTCCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEECCHHhCCCC------------------------------------------CCChhHHHHHHHHHHHHHHHHHH
Confidence            899999998876543                                          66889999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCC--------------CCCChhhhhhhhhhhhccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHA--------------GILSVEEGAESPVKLALLPDG  283 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~--------------~~~~~~~~a~~~~~~~~~~~~  283 (298)
                      +  .+|+||+|+||+|+|++....              ...+|++.|+..++++..+..
T Consensus       204 ~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~  262 (281)
T 4dry_A          204 GRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPLS  262 (281)
T ss_dssp             HGGGTEEEEEEEEECBCC-------CEEECTTSCEEECCCBCHHHHHHHHHHHHHSCTT
T ss_pred             hcccCeEEEEEEECcCcChhhhhhcchhhhhhhcccccCCCCHHHHHHHHHHHhCCCcc
Confidence            8  589999999999999986432              245888888888888876553

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=3.8e-39  Score=286.61  Aligned_cols=222  Identities=32%  Similarity=0.350  Sum_probs=184.6

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..+.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.   .+.++++|+++.++++++++++.
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dv~~~~~v~~~~~~~~   80 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GR---GAVHHVVDLTNEVSVRALIDFTI   80 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CT---TCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CC---CeEEEECCCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888877776   22   27889999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|++|+||||||......                     ..+.+.+.+.|++.+++|+.|+++++++++|.|++++.|
T Consensus        81 ~~~g~id~lv~nAg~~~~~~---------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g  139 (271)
T 3tzq_B           81 DTFGRLDIVDNNAAHSDPAD---------------------MLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGG  139 (271)
T ss_dssp             HHHSCCCEEEECCCCCCTTC---------------------CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred             HHcCCCCEEEECCCCCCCCC---------------------CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999863311                     112346889999999999999999999999999988889


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|+++|+++++.|+
T Consensus       140 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~  177 (271)
T 3tzq_B          140 AIVNISSATAHAAY------------------------------------------DMSTAYACTKAAIETLTRYVATQY  177 (271)
T ss_dssp             EEEEECCGGGTSBC------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCHHHcCCC------------------------------------------CCChHHHHHHHHHHHHHHHHHHHH
Confidence            99999998876543                                          667899999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                        .||+||+|+||+|+|++....                ...+|++.++..+.++.......+|..+..
T Consensus       178 ~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~v  246 (271)
T 3tzq_B          178 GRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAA  246 (271)
T ss_dssp             GGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEE
Confidence              489999999999999986521                123667777777666655444445554443

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.6e-39  Score=286.31  Aligned_cols=220  Identities=30%  Similarity=0.363  Sum_probs=174.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++.+|++|||||++|||+++|++|+++|++|++++ |+.+.+++..+++...+..   +.++++|+++.++++++++++.
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~v~~~~~~~~  100 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGK---ALTAQADVSDPAAVRRLFATAE  100 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCe---EEEEEcCCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999985 5555677777777766543   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|++|+||||||+....+                       +.+.+.+.|++.+++|+.|+++++++++|.|++  .|
T Consensus       101 ~~~g~iD~lvnnAG~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g  155 (267)
T 3u5t_A          101 EAFGGVDVLVNNAGIMPLTT-----------------------IAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GG  155 (267)
T ss_dssp             HHHSCEEEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EE
T ss_pred             HHcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CC
Confidence            99999999999999875432                       234588999999999999999999999999965  48


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|+++|+++++.|+
T Consensus       156 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~  193 (267)
T 3u5t_A          156 RIINMSTSQVGLLH------------------------------------------PSYGIYAAAKAGVEAMTHVLSKEL  193 (267)
T ss_dssp             EEEEECCTHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEeChhhccCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHh
Confidence            99999998765443                                          667899999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                        .+|+||+|+||+|+|++....                ...+|++.++..+.++.......+|..+..
T Consensus       194 ~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~v  262 (267)
T 3u5t_A          194 RGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRA  262 (267)
T ss_dssp             TTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEE
T ss_pred             hhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEe
Confidence              489999999999999986431                123566666666666654444445555443

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.5e-39  Score=289.88  Aligned_cols=227  Identities=22%  Similarity=0.207  Sum_probs=185.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..   +.++++|+++.++++++++.+.+
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~~~~~~~~~~~  106 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGT---AQELAGDLSEAGAGTDLIERAEA  106 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCC---EEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCe---EEEEEecCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999988888876544   89999999999999999999988


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      . +++|+||||||.....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++.|+
T Consensus       107 ~-g~iD~lvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~  162 (275)
T 4imr_A          107 I-APVDILVINASAQINAT-----------------------LSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGR  162 (275)
T ss_dssp             H-SCCCEEEECCCCCCCBC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             h-CCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcE
Confidence            7 99999999999865432                       23468899999999999999999999999998877899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.|+ 
T Consensus       163 Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~  200 (275)
T 4imr_A          163 VVSIGSINQLRPK------------------------------------------SVVTAYAATKAAQHNLIQSQARDFA  200 (275)
T ss_dssp             EEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEECCHHhCCCC------------------------------------------CCchhhHHHHHHHHHHHHHHHHHhc
Confidence            9999998876432                                          556779999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCCCCChh----hhhhh-hhhhhccCCCCCcceEeccCccCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAGILSVE----EGAES-PVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~~~~~~----~~a~~-~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                       .+|+||+|+||+|+|++........++    ..... |+.+..+|++.+....|++++.++|
T Consensus       201 ~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~  263 (275)
T 4imr_A          201 GDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSF  263 (275)
T ss_dssp             GGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             ccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCC
Confidence             489999999999999875321100111    11112 5555566666666666666665543

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2.1e-39  Score=289.36  Aligned_cols=219  Identities=24%  Similarity=0.319  Sum_probs=182.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+.+..+++   +.   ++.++++|+++.++++++++++.+
T Consensus        24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dv~d~~~v~~~~~~~~~   97 (277)
T 4dqx_A           24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GS---KAFGVRVDVSSAKDAESMVEKTTA   97 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CT---TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC---ceEEEEecCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988777776664   22   288999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .+|++|+||||||+....+                       +.+.+.+.|++.+++|+.|+++++++++|.|++++.|+
T Consensus        98 ~~g~iD~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~  154 (277)
T 4dqx_A           98 KWGRVDVLVNNAGFGTTGN-----------------------VVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGS  154 (277)
T ss_dssp             HHSCCCEEEECCCCCCCBC-----------------------TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEE
T ss_pred             HcCCCCEEEECCCcCCCCC-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcE
Confidence            9999999999999865432                       22357899999999999999999999999999888899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.|+ 
T Consensus       155 iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~  192 (277)
T 4dqx_A          155 IINTTSYTATSAI------------------------------------------ADRTAYVASKGAISSLTRAMAMDHA  192 (277)
T ss_dssp             EEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEECchhhCcCC------------------------------------------CCChhHHHHHHHHHHHHHHHHHHhh
Confidence            9999998876543                                          667899999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCC---------------------CCCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 -PKFCVNCVCPGFVKTDINFH---------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~---------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                       .+|+||+|+||+|+|++...                     ....+|++.++..+.++.......+|..+..
T Consensus       193 ~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~v  265 (277)
T 4dqx_A          193 KEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSILTV  265 (277)
T ss_dssp             GGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCccCCCcCCEEEE
Confidence             48999999999999987211                     0123667777777666655444445555443

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=5.3e-39  Score=286.71  Aligned_cols=186  Identities=28%  Similarity=0.341  Sum_probs=166.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.   .+.++++|+++.++++++++++.+
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dv~d~~~v~~~~~~~~~   99 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GC---GAAACRVDVSDEQQIIAMVDACVA   99 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CS---SCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CC---cceEEEecCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988887777766   22   288999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++.|+
T Consensus       100 ~~g~iD~lvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~  156 (277)
T 3gvc_A          100 AFGGVDKLVANAGVVHLAS-----------------------LIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGA  156 (277)
T ss_dssp             HHSSCCEEEECCCCCCCBC-----------------------TTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred             HcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcE
Confidence            9999999999999875432                       22358899999999999999999999999998888899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|++||+|+++|+++++.|+ 
T Consensus       157 Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~  194 (277)
T 3gvc_A          157 IVNLSSLAGQVAV------------------------------------------GGTGAYGMSKAGIIQLSRITAAELR  194 (277)
T ss_dssp             EEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEEcchhhccCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhc
Confidence            9999998876543                                          667899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCC
Q 022357          242 -PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~  259 (298)
                       .||+||+|+||+|+|++.
T Consensus       195 ~~gI~vn~v~PG~v~t~~~  213 (277)
T 3gvc_A          195 SSGIRSNTLLPAFVDTPMQ  213 (277)
T ss_dssp             GGTEEEEEEEECSBCCHHH
T ss_pred             ccCeEEEEEeeCCccCchH
Confidence             589999999999999864

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=7.4e-39  Score=284.47  Aligned_cols=228  Identities=28%  Similarity=0.321  Sum_probs=180.9

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      ..+.+|++|||||++|||+++|++|+++|++|++++++ .+.++...+++...+..   +.++++|+++.++++++++++
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~   90 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSD---AIAIKADIRQVPEIVKLFDQA   90 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTSHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHH
Confidence            45789999999999999999999999999999998765 45667777777776544   889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+++|++|+||||||+....                       ++.+.+.++|++.+++|+.|+++++++++|.|++  .
T Consensus        91 ~~~~g~id~lvnnAg~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~  145 (270)
T 3is3_A           91 VAHFGHLDIAVSNSGVVSFG-----------------------HLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--G  145 (270)
T ss_dssp             HHHHSCCCEEECCCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--T
T ss_pred             HHHcCCCCEEEECCCCCCCC-----------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--C
Confidence            99999999999999987543                       2234688999999999999999999999999965  5


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..                                         ...+....|++||+|+++|+++++.|
T Consensus       146 g~iv~isS~~~~~-----------------------------------------~~~~~~~~Y~asKaa~~~~~~~la~e  184 (270)
T 3is3_A          146 GRIVLTSSNTSKD-----------------------------------------FSVPKHSLYSGSKGAVDSFVRIFSKD  184 (270)
T ss_dssp             CEEEEECCTTTTT-----------------------------------------CCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEeCchhcc-----------------------------------------CCCCCCchhHHHHHHHHHHHHHHHHH
Confidence            8999999977321                                         11266789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCC--------CCChhh-----hhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAG--------ILSVEE-----GAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~--------~~~~~~-----~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +  .||+||+|+||+|+|++.....        ...+++     ....|+++...|++.+....|++++.++|
T Consensus       185 ~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~  257 (270)
T 3is3_A          185 CGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEW  257 (270)
T ss_dssp             HGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             hcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCC
Confidence            9  5899999999999999854100        011111     12235555555556666666666655443

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=4.5e-38  Score=280.09  Aligned_cols=224  Identities=21%  Similarity=0.223  Sum_probs=185.2

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-------hHHHHHHHHhcCCCCcceeEEEeccCcHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-------GLEAVEKLKASGVDPELLLFHQLDISDLASVS   74 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~   74 (298)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++       +.+..+++...+..   +.++++|+++.++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~   78 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ---GLALKCDIREEDQVR   78 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSE---EEEEECCTTCHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCe---EEEEeCCCCCHHHHH
Confidence            35789999999999999999999999999999999998754       45666666655433   889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhh
Q 022357           75 SLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL  154 (298)
Q Consensus        75 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  154 (298)
                      ++++++.+++|++|+||||||+....+                       +.+.+.+.|++.+++|+.|+++++++++|+
T Consensus        79 ~~~~~~~~~~g~iD~lvnnAG~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  135 (274)
T 3e03_A           79 AAVAATVDTFGGIDILVNNASAIWLRG-----------------------TLDTPMKRFDLMQQVNARGSFVCAQACLPH  135 (274)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCC-----------------------GGGSCHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCcccCCC-----------------------cccCCHHHHHHHHhHhhHhHHHHHHHHHHH
Confidence            999999999999999999999875432                       223588999999999999999999999999


Q ss_pred             hccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHH
Q 022357          155 LELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT  234 (298)
Q Consensus       155 ~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~  234 (298)
                      |++++.|+||++||..+..+..                                        .+....|++||+|+++|+
T Consensus       136 m~~~~~g~iv~isS~~~~~~~~----------------------------------------~~~~~~Y~asKaal~~l~  175 (274)
T 3e03_A          136 LLQAPNPHILTLAPPPSLNPAW----------------------------------------WGAHTGYTLAKMGMSLVT  175 (274)
T ss_dssp             HTTSSSCEEEECCCCCCCCHHH----------------------------------------HHHCHHHHHHHHHHHHHH
T ss_pred             HHhcCCceEEEECChHhcCCCC----------------------------------------CCCCchHHHHHHHHHHHH
Confidence            9988889999999988764310                                        134678999999999999


Q ss_pred             HHHHHhC--CCcEEEEeeCC-eeecCCCCCCC------CCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          235 RILAKRY--PKFCVNCVCPG-FVKTDINFHAG------ILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       235 ~~la~e~--~~i~vn~v~PG-~v~t~~~~~~~------~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      ++++.|+  .||+||+|+|| +++|++.....      ..+|++.++..+.++.......+|.++.
T Consensus       176 ~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~~itG~~i~  241 (274)
T 3e03_A          176 LGLAAEFGPQGVAINALWPRTVIATDAINMLPGVDAAACRRPEIMADAAHAVLTREAAGFHGQFLI  241 (274)
T ss_dssp             HHHHHHHGGGTCEEEEEECSBCBCC-------CCCGGGSBCTHHHHHHHHHHHTSCCTTCCSCEEE
T ss_pred             HHHHHHhhhcCEEEEEEECCcccccchhhhcccccccccCCHHHHHHHHHHHhCccccccCCeEEE
Confidence            9999999  48999999999 69998764321      4588999999988887766667777763

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=3.1e-38  Score=276.17  Aligned_cols=223  Identities=25%  Similarity=0.290  Sum_probs=184.3

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEecc--CcHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDI--SDLASVSSLADF   79 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--s~~~~v~~~~~~   79 (298)
                      +.+++|++|||||++|||+++|++|+++|++|++++|+.+++++..++++..+...  ..++.+|+  ++.++++++++.
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQ--PLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCC--CEEEECCTTTCCHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCC--ceEEEeccccCCHHHHHHHHHH
Confidence            34788999999999999999999999999999999999999999989888765433  56666666  999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+.++++|+||||||......                      ++.+.+.++|++.+++|+.++++++++++|+|++++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~----------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~  145 (247)
T 3i1j_A           88 VEHEFGRLDGLLHNASIIGPRT----------------------PLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE  145 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCS----------------------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred             HHHhCCCCCEEEECCccCCCCC----------------------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence            9999999999999999864321                      223468899999999999999999999999998888


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          +....|++||+|+++|+++++.
T Consensus       146 ~~~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~  183 (247)
T 3i1j_A          146 DASIAFTSSSVGRKGR------------------------------------------ANWGAYGVSKFATEGLMQTLAD  183 (247)
T ss_dssp             SEEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEcchhhcCCC------------------------------------------CCcchhHHHHHHHHHHHHHHHH
Confidence            8999999998876543                                          6678999999999999999999


Q ss_pred             hC---CCcEEEEeeCCeeecCCCCC-------CCCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          240 RY---PKFCVNCVCPGFVKTDINFH-------AGILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       240 e~---~~i~vn~v~PG~v~t~~~~~-------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      |+   .+|+||+|+||+|+|++...       ....+|++.++..+.++.......+|..+
T Consensus       184 e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~dva~~~~~l~s~~~~~itG~~i  244 (247)
T 3i1j_A          184 ELEGVTAVRANSINPGATRTGMRAQAYPDENPLNNPAPEDIMPVYLYLMGPDSTGINGQAL  244 (247)
T ss_dssp             HHTTTSSEEEEEEECCCCSSHHHHHHSTTSCGGGSCCGGGGTHHHHHHHSGGGTTCCSCEE
T ss_pred             HhcCCCCeEEEEEecCcccCccchhcccccCccCCCCHHHHHHHHHHHhCchhccccCeee
Confidence            98   48999999999999987532       12345666666666665543344444444

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=2.6e-38  Score=282.70  Aligned_cols=229  Identities=20%  Similarity=0.177  Sum_probs=183.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.   .+.++++|+++.++++++++++.+
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dv~~~~~v~~~~~~~~~   75 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GG---NAVGVVGDVRSLQDQKRAAERCLA   75 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BT---TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CC---cEEEEEcCCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987776655443   22   388999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      +++++|+||||||+.........                  ...+.+.+.|++.+++|+.++++++++++|.|++++ |+
T Consensus        76 ~~g~iD~lvnnAg~~~~~~~~~~------------------~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~  136 (281)
T 3zv4_A           76 AFGKIDTLIPNAGIWDYSTALAD------------------LPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GS  136 (281)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGG------------------SCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CE
T ss_pred             hcCCCCEEEECCCcCcccccccc------------------CChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-Ce
Confidence            99999999999998654321111                  011245678999999999999999999999997654 89


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.|+ 
T Consensus       137 iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~  174 (281)
T 3zv4_A          137 VVFTISNAGFYPN------------------------------------------GGGPLYTATKHAVVGLVRQMAFELA  174 (281)
T ss_dssp             EEEECCGGGTSSS------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEecchhccCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhc
Confidence            9999998877543                                          667899999999999999999998 


Q ss_pred             CCcEEEEeeCCeeecCCCCCCCCC---------C--hhhhhhhhhhhhccCCCCCcceEeccC-ccCCC
Q 022357          242 PKFCVNCVCPGFVKTDINFHAGIL---------S--VEEGAESPVKLALLPDGGPTGRFFLRK-EEAPF  298 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~~~~---------~--~~~~a~~~~~~~~~~~~~~~~~~~l~~-~~a~~  298 (298)
                      ++|+||+|+||+|+|++.......         .  .......|+++..+|++.+....|+++ +.+.|
T Consensus       175 ~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~  243 (281)
T 3zv4_A          175 PHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGDSLP  243 (281)
T ss_dssp             TTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTTTSTT
T ss_pred             CCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhccccccc
Confidence            569999999999999986432110         0  112234577788888888888888888 55543

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=2.7e-39  Score=286.25  Aligned_cols=220  Identities=20%  Similarity=0.232  Sum_probs=173.4

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc---hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE---KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      |+++.+|++|||||++|||+++|++|+++|++|++++|..   +.+++..++++..+.   ++.++++|+++.+++++++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~   82 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGA---KVALYQSDLSNEEEVAKLF   82 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTC---EEEEEECCCCSHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCC---cEEEEECCCCCHHHHHHHH
Confidence            3467899999999999999999999999999999987753   456667777766543   3899999999999999999


Q ss_pred             HHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc
Q 022357           78 DFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL  157 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  157 (298)
                      +++.+++|++|+||||||+....+                       +.+.+.+.|++.+++|+.++++++++++|.|+ 
T Consensus        83 ~~~~~~~g~iD~lvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-  138 (262)
T 3ksu_A           83 DFAEKEFGKVDIAINTVGKVLKKP-----------------------IVETSEAEFDAMDTINNKVAYFFIKQAAKHMN-  138 (262)
T ss_dssp             HHHHHHHCSEEEEEECCCCCCSSC-----------------------GGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE-
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc-
Confidence            999999999999999999875432                       23468899999999999999999999999994 


Q ss_pred             CCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH
Q 022357          158 SDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       158 ~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l  237 (298)
                       +.|+||++||..+..+.                                          +....|++||+|+++|++++
T Consensus       139 -~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~l  175 (262)
T 3ksu_A          139 -PNGHIITIATSLLAAYT------------------------------------------GFYSTYAGNKAPVEHYTRAA  175 (262)
T ss_dssp             -EEEEEEEECCCHHHHHH------------------------------------------CCCCC-----CHHHHHHHHH
T ss_pred             -CCCEEEEEechhhccCC------------------------------------------CCCchhHHHHHHHHHHHHHH
Confidence             35899999998765432                                          55788999999999999999


Q ss_pred             HHhC--CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          238 AKRY--PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       238 a~e~--~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      +.|+  .+|+||+|+||+|+|++....                ...+|++.++..+.++.. ....+|..+.
T Consensus       176 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~~itG~~i~  246 (262)
T 3ksu_A          176 SKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD-GWWINGQTIF  246 (262)
T ss_dssp             HHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTHHHHHHHHTT-TTTCCSCEEE
T ss_pred             HHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC-CCCccCCEEE
Confidence            9999  589999999999999875321                123566666666665554 3334444443

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=6.3e-38  Score=273.17  Aligned_cols=206  Identities=17%  Similarity=0.146  Sum_probs=175.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++..      .+.++++|+++.++++++++.+.+.+
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~~~   75 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN------AVIGIVADLAHHEDVDVAFAAAVEWG   75 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC------CceEEECCCCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999999888887777632      28899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      |++|+||||||.....                       ++.+.+.++|++.+++|+.|+++++++++|.|++++ ++||
T Consensus        76 g~id~lvnnAg~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv  131 (235)
T 3l6e_A           76 GLPELVLHCAGTGEFG-----------------------PVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLA  131 (235)
T ss_dssp             CSCSEEEEECCCC-----------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEE
T ss_pred             CCCcEEEECCCCCCCC-----------------------ChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEE
Confidence            9999999999986433                       223358899999999999999999999999998665 5999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||..+..+.                                          +....|++||+|+++|+++++.|+  .
T Consensus       132 ~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~  169 (235)
T 3l6e_A          132 NVLSSAAQVGK------------------------------------------ANESLYCASKWGMRGFLESLRAELKDS  169 (235)
T ss_dssp             EECCEECCSSC------------------------------------------SSHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred             EEeCHHhcCCC------------------------------------------CCCcHHHHHHHHHHHHHHHHHHHhhcc
Confidence            99998887553                                          567899999999999999999999  4


Q ss_pred             CcEEEEeeCCeeecCCCCCC------CCCChhhhhhhhhhhhccCC
Q 022357          243 KFCVNCVCPGFVKTDINFHA------GILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~~------~~~~~~~~a~~~~~~~~~~~  282 (298)
                      +|+||+|+||+|+|++....      .+.+|++.++..+.++..+.
T Consensus       170 gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~pedvA~~v~~l~~~~~  215 (235)
T 3l6e_A          170 PLRLVNLYPSGIRSEFWDNTDHVDPSGFMTPEDAAAYMLDALEARS  215 (235)
T ss_dssp             SEEEEEEEEEEECCCC-----------CBCHHHHHHHHHHHTCCCS
T ss_pred             CCEEEEEeCCCccCcchhccCCCCCcCCCCHHHHHHHHHHHHhCCC
Confidence            89999999999999986432      35689999999998887544

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=6.6e-38  Score=284.76  Aligned_cols=191  Identities=29%  Similarity=0.375  Sum_probs=167.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC------------chhhHHHHHHHHhcCCCCcceeEEEeccC
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD------------EKRGLEAVEKLKASGVDPELLLFHQLDIS   68 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~Dls   68 (298)
                      |..+.+|++|||||++|||+++|++|+++|++|++++|+            .+++.+..+++...+..   +.++++|++
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~  117 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR---IIARQADVR  117 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCC---EEEEECCTT
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCe---EEEEECCCC
Confidence            667889999999999999999999999999999999886            45566666677665543   899999999


Q ss_pred             cHHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHH
Q 022357           69 DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC  148 (298)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  148 (298)
                      +.++++++++++.+++|++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++
T Consensus       118 d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~  174 (317)
T 3oec_A          118 DLASLQAVVDEALAEFGHIDILVSNVGISNQGE-----------------------VVSLTDQQWSDILQTNLIGAWHAC  174 (317)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBC-----------------------TTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHhhHHHHHHH
Confidence            999999999999999999999999999875432                       223578999999999999999999


Q ss_pred             HHHhhhhccCC-CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHH
Q 022357          149 EALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSK  227 (298)
Q Consensus       149 ~~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  227 (298)
                      ++++|.|++++ .|+||++||..+..+.                                          ++...|++||
T Consensus       175 ~~~~~~m~~~~~~g~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asK  212 (317)
T 3oec_A          175 RAVLPSMIERGQGGSVIFVSSTVGLRGA------------------------------------------PGQSHYAASK  212 (317)
T ss_dssp             HHHHHHHHHTCSCEEEEEECCGGGSSCC------------------------------------------TTBHHHHHHH
T ss_pred             HHHHHHHHHcCCCCEEEEECcHHhcCCC------------------------------------------CCCcchHHHH
Confidence            99999998764 6899999998877543                                          6688999999


Q ss_pred             HHHHHHHHHHHHhC--CCcEEEEeeCCeeecCCC
Q 022357          228 AVINAYTRILAKRY--PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       228 ~al~~l~~~la~e~--~~i~vn~v~PG~v~t~~~  259 (298)
                      +|+++|+++++.|+  .||+||+|+||+|+|++.
T Consensus       213 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  246 (317)
T 3oec_A          213 HGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMA  246 (317)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCcccCccc
Confidence            99999999999999  489999999999999864

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-39  Score=283.09  Aligned_cols=229  Identities=23%  Similarity=0.267  Sum_probs=191.1

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.++++...+++...+..   +.++++|+++.++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~   79 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE---ARSYVCDVTSEEAVIGTVDSVV   79 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEEecCCCHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999988888888888765433   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccC-CcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           82 TQFGKLDILANNAGIA-SVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      +.++++|+||||||.. ...                       ++.+.+.++|++.+++|+.++++++++++|.|++++.
T Consensus        80 ~~~g~id~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~  136 (262)
T 1zem_A           80 RDFGKIDFLFNNAGYQGAFA-----------------------PVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNY  136 (262)
T ss_dssp             HHHSCCCEEEECCCCCCCCB-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             HHhCCCCEEEECCCCCCCCC-----------------------ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999976 222                       1223578899999999999999999999999987777


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|++.|+++++.|
T Consensus       137 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e  174 (262)
T 1zem_A          137 GRIVNTASMAGVKGP------------------------------------------PNMAAYGTSKGAIIALTETAALD  174 (262)
T ss_dssp             EEEEEECCHHHHSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEcchhhccCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHH
Confidence            999999998766443                                          56789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCC----------C-CC-Chh-h----hhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHA----------G-IL-SVE-E----GAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~----------~-~~-~~~-~----~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +  .+|+||+|+||+|+|++....          . .. .++ .    ....|+.+..+|++.+....|++++.++|
T Consensus       175 ~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~  251 (262)
T 1zem_A          175 LAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSF  251 (262)
T ss_dssp             HGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTT
T ss_pred             HHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence            8  489999999999999975321          0 01 122 1    12357777888888888888888877654

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-37  Score=272.37  Aligned_cols=223  Identities=28%  Similarity=0.317  Sum_probs=191.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..++++..+..   +.++++|+++.++++++++++.+
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   78 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFK---ARGLVLNISDIESIQNFFAEIKA   78 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---eEEEEecCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999888888888876544   89999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||+....+                       +.+.+.+.+++.+++|+.+++++++.++|.|.+++.|+
T Consensus        79 ~~~~id~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~  135 (247)
T 3lyl_A           79 ENLAIDILVNNAGITRDNL-----------------------MMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGR  135 (247)
T ss_dssp             TTCCCSEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             HcCCCCEEEECCCCCCCCc-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeE
Confidence            9999999999999875432                       22357889999999999999999999999998877899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|++||+|++.|+++++.++ 
T Consensus       136 iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~  173 (247)
T 3lyl_A          136 IISIGSVVGSAGN------------------------------------------PGQTNYCAAKAGVIGFSKSLAYEVA  173 (247)
T ss_dssp             EEEECCTHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEEcchhhccCC------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998876543                                          667899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                       .+|+||+|+||+|+|++....               ...+|++.++..+.++.......+|..+..+
T Consensus       174 ~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vd  241 (247)
T 3lyl_A          174 SRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVN  241 (247)
T ss_dssp             GGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEEC
Confidence             589999999999999986542               1347788888877777655555556555443

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.3e-37  Score=272.99  Aligned_cols=189  Identities=28%  Similarity=0.343  Sum_probs=167.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+..   +.++++|+++.++++++++.+.+
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dv~~~~~~~~~~~~~~~   80 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAK---VHVLELDVADRQGVDAAVASTVE   80 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEECCCCCHHHHHHHHHHHHH
Confidence            378899999999999999999999999999999999998888888888765433   88999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++ |+
T Consensus        81 ~~g~id~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~  136 (247)
T 2jah_A           81 ALGGLDILVNNAGIMLLGP-----------------------VEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GT  136 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCC-----------------------STTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CE
T ss_pred             HcCCCCEEEECCCCCCCCc-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CE
Confidence            9999999999999864321                       22357889999999999999999999999998766 99


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.|+ 
T Consensus       137 iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~  174 (247)
T 2jah_A          137 VVQMSSIAGRVNV------------------------------------------RNAAVYQATKFGVNAFSETLRQEVT  174 (247)
T ss_dssp             EEEECCGGGTCCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEEccHHhcCCC------------------------------------------CCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            9999998876543                                          667899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~  260 (298)
                       .||+||+|+||+|+|++..
T Consensus       175 ~~gi~v~~v~PG~v~T~~~~  194 (247)
T 2jah_A          175 ERGVRVVVIEPGTTDTELRG  194 (247)
T ss_dssp             GGTCEEEEEEECSBSSSGGG
T ss_pred             ccCcEEEEEECCCCCCcchh
Confidence             4899999999999999854

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=2.2e-38  Score=285.01  Aligned_cols=228  Identities=25%  Similarity=0.288  Sum_probs=180.3

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc--hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE--KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+.  ...+...+.++..+..   +.++++|+++.+++++++++
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~~  121 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRK---AVLLPGDLSDESFARSLVHK  121 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCC---EEECCCCTTSHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCc---EEEEEecCCCHHHHHHHHHH
Confidence            456899999999999999999999999999999999873  3455555556555433   88999999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.++++++|+||||||......                      .+.+.+.+.|++.+++|+.|+++++++++|.|++  
T Consensus       122 ~~~~~g~iD~lv~nAg~~~~~~----------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--  177 (294)
T 3r3s_A          122 AREALGGLDILALVAGKQTAIP----------------------EIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--  177 (294)
T ss_dssp             HHHHHTCCCEEEECCCCCCCCS----------------------SGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--
T ss_pred             HHHHcCCCCEEEECCCCcCCCC----------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--
Confidence            9999999999999999764321                      2234688999999999999999999999999964  


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          +....|++||+|+++|+++++.
T Consensus       178 ~g~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~  215 (294)
T 3r3s_A          178 GASIITTSSIQAYQPS------------------------------------------PHLLDYAATKAAILNYSRGLAK  215 (294)
T ss_dssp             TCEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECChhhccCC------------------------------------------CCchHHHHHHHHHHHHHHHHHH
Confidence            4899999998876543                                          6678999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCC---CCCChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHA---GILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~---~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      |+  .||+||+|+||+|+|++....   ...........|+++...|++.+....|++++.++|
T Consensus       216 e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~  279 (294)
T 3r3s_A          216 QVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSY  279 (294)
T ss_dssp             HHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            99  489999999999999873211   011112223345555555666666666666555443

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=9.7e-39  Score=284.41  Aligned_cols=226  Identities=24%  Similarity=0.230  Sum_probs=178.0

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .++.+|++|||||++|||+++|++|+++|++|++++|+ +.+.+..+++...+.   .+.++++|+++.++++++. +..
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~-~~~  101 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGG---SAEAVVADLADLEGAANVA-EEL  101 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTC---EEEEEECCTTCHHHHHHHH-HHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCC---cEEEEEecCCCHHHHHHHH-HHH
Confidence            35789999999999999999999999999999999976 456667777765543   3889999999999999995 445


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +.++++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++.|
T Consensus       102 ~~~g~iD~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g  158 (273)
T 3uf0_A          102 AATRRVDVLVNNAGIIARAP-----------------------AEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSG  158 (273)
T ss_dssp             HHHSCCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred             HhcCCCcEEEECCCCCCCCC-----------------------chhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence            66799999999999875432                       2346889999999999999999999999999887789


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|+++|+++++.|+
T Consensus       159 ~IV~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~  196 (273)
T 3uf0_A          159 RIVTIASMLSFQGG------------------------------------------RNVAAYAASKHAVVGLTRALASEW  196 (273)
T ss_dssp             EEEEECCGGGTSCC------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcchHhcCCC------------------------------------------CCChhHHHHHHHHHHHHHHHHHHH
Confidence            99999998877543                                          667899999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCC---CChhhhhhhhhhhhccCCCCCcceEeccCccCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGI---LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAP  297 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~  297 (298)
                        .||+||+|+||+|+|++......   .........|+++...|++.+....|++++.++
T Consensus       197 ~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~  257 (273)
T 3uf0_A          197 AGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAAS  257 (273)
T ss_dssp             GGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred             hhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhc
Confidence              48999999999999987532100   001112233444455555555555555555443

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-38  Score=284.68  Aligned_cols=224  Identities=24%  Similarity=0.293  Sum_probs=188.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC---EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI---TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~---~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      .+.+|++|||||++|||+++|++|+++|+   +|++++|+.+++++..+++...... ..+.++++|+++.+++++++++
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPN-AKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTT-CEEEEEECCTTCGGGHHHHHHT
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCC-CeEEEEECCCCCHHHHHHHHHH
Confidence            46789999999999999999999999998   9999999999988888888764221 2388999999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+.+|++|+||||||......                      ++.+.+.++|++.+++|+.|+++++++++|.|++++
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~----------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~  166 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSD----------------------RVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN  166 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCC----------------------CTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             HHHhcCCCCEEEECCCcCCCCC----------------------CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999764221                      122358899999999999999999999999998888


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          +....|++||+|+++|+++++.
T Consensus       167 ~g~IV~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~  204 (287)
T 3rku_A          167 SGDIVNLGSIAGRDAY------------------------------------------PTGSIYCASKFAVGAFTDSLRK  204 (287)
T ss_dssp             CCEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEECChhhcCCC------------------------------------------CCCchHHHHHHHHHHHHHHHHH
Confidence            8999999998876543                                          6688999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCC---------------CCCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFH---------------AGILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~---------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      |+  .||+||+|+||+|+|++...               ..+++|++.++..+.++........|..+.
T Consensus       205 e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~  273 (287)
T 3rku_A          205 ELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATSRKQNTVIADTLI  273 (287)
T ss_dssp             HTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHHHHHHHHTSCTTEEEEEEEE
T ss_pred             HhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCCHHHHHHHHHHHhCCCCCeEecceEE
Confidence            99  58999999999999997311               124577888888888887665544444443

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=3e-37  Score=273.09  Aligned_cols=226  Identities=23%  Similarity=0.175  Sum_probs=189.2

Q ss_pred             CCcCCCcEEEEeCCC-CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSN-KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas-~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |..+++|++|||||+ +|||+++|++|+++|++|++++|+.+++++..+++......  ++.++++|+++.+++++++++
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~v~~~~~~   94 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLG--RVEAVVCDVTSTEAVDALITQ   94 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSS--CEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCC--ceEEEEeCCCCHHHHHHHHHH
Confidence            456789999999998 59999999999999999999999999988888888765433  399999999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC-
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-  158 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-  158 (298)
                      +.++++++|+||||||+....+                       +.+.+.+.|++.+++|+.++++++++++|+|+++ 
T Consensus        95 ~~~~~g~id~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  151 (266)
T 3o38_A           95 TVEKAGRLDVLVNNAGLGGQTP-----------------------VVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVD  151 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS
T ss_pred             HHHHhCCCcEEEECCCcCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999865432                       2235889999999999999999999999999876 


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                      +.++||++||..+..+.                                          +....|++||+|+++|+++++
T Consensus       152 ~~~~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~la  189 (266)
T 3o38_A          152 HGGVIVNNASVLGWRAQ------------------------------------------HSQSHYAAAKAGVMALTRCSA  189 (266)
T ss_dssp             CCEEEEEECCGGGTCCC------------------------------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEeCCHHHcCCC------------------------------------------CCCchHHHHHHHHHHHHHHHH
Confidence            56899999998876543                                          667899999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      .|+  .+|+||+|+||+|+|++....                ...+|++.++..+.++.......+|..+..+
T Consensus       190 ~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vd  262 (266)
T 3o38_A          190 IEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVS  262 (266)
T ss_dssp             HHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccccCccCCEEEEc
Confidence            998  589999999999999985431                1347888888888887765556666666554

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-38  Score=281.71  Aligned_cols=192  Identities=22%  Similarity=0.239  Sum_probs=167.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||++|||++++++|+++|++|++++|+.+++++..+++..... ...+.++++|+++.++++++++++.+
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP-DAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT-TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999888887777765411 11388999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||+....                      .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+
T Consensus        89 ~~g~id~lv~nAg~~~~~----------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~  146 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQ----------------------NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGM  146 (267)
T ss_dssp             HHSCCSEEEECCCCCCCC----------------------BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred             HcCCCCEEEECCCcCCCC----------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCE
Confidence            999999999999976431                      1222357889999999999999999999999998777799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.|+ 
T Consensus       147 iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~  184 (267)
T 1iy8_A          147 VVNTASVGGIRGI------------------------------------------GNQSGYAAAKHGVVGLTRNSAVEYG  184 (267)
T ss_dssp             EEEECCGGGTSBC------------------------------------------SSBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEEcchhhccCC------------------------------------------CCCccHHHHHHHHHHHHHHHHHHHH
Confidence            9999998876543                                          567899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCC
Q 022357          242 -PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~  259 (298)
                       .+|+||+|+||+|+|++.
T Consensus       185 ~~gi~v~~v~PG~v~t~~~  203 (267)
T 1iy8_A          185 RYGIRINAIAPGAIWTPMV  203 (267)
T ss_dssp             GGTCEEEEEEECSBCSHHH
T ss_pred             hcCeEEEEEEeCCCcCcch
Confidence             489999999999999864

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=2.2e-38  Score=277.54  Aligned_cols=220  Identities=26%  Similarity=0.346  Sum_probs=182.4

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +++|++|||||++|||++++++|+++|++|++++| +++++++..++++..+..   +.++++|+++.++++++++++.+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSD---AIAVRADVANAEDVTNMVKQTVD   78 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999 777777777777765433   88999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      +++++|+||||||.....+                       +.+.+.++|++.+++|+.++++++++++|.|++++.|+
T Consensus        79 ~~g~id~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~  135 (246)
T 2uvd_A           79 VFGQVDILVNNAGVTKDNL-----------------------LMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGR  135 (246)
T ss_dssp             HHSCCCEEEECCCCCCCBC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             HcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcE
Confidence            9999999999999864321                       22357889999999999999999999999998777799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.|+ 
T Consensus       136 iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~  173 (246)
T 2uvd_A          136 IVNIASVVGVTGN------------------------------------------PGQANYVAAKAGVIGLTKTSAKELA  173 (246)
T ss_dssp             EEEECCTHHHHCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEECCHHhcCCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhh
Confidence            9999998765432                                          567899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                       .+|+||+|+||+|+|++....               .+.+|++.++..+.++.......+|..+.
T Consensus       174 ~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~  239 (246)
T 2uvd_A          174 SRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLN  239 (246)
T ss_dssp             GGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEE
Confidence             489999999999999975431               12366777776666665433344444443

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-37  Score=274.58  Aligned_cols=224  Identities=21%  Similarity=0.220  Sum_probs=174.8

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..      .+.++++|+++.++++++++++
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~   75 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGA------AVRFRNADVTNEADATAALAFA   75 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------------CEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC------ceEEEEccCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999998887776666521      2889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC--
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS--  158 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--  158 (298)
                      .+++|++|+||||||.........                   ...+.+.+.|++.+++|+.|+++++++++|.|+++  
T Consensus        76 ~~~~g~id~lv~nAg~~~~~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~  136 (257)
T 3tpc_A           76 KQEFGHVHGLVNCAGTAPGEKILG-------------------RSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEP  136 (257)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSEE-------------------TTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCC
T ss_pred             HHHcCCCCEEEECCCCCCCCcccc-------------------ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccc
Confidence            999999999999999875432211                   11125778999999999999999999999999874  


Q ss_pred             ----CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHH
Q 022357          159 ----DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT  234 (298)
Q Consensus       159 ----~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~  234 (298)
                          +.|+||++||..+..+.                                          +....|++||+|+++|+
T Consensus       137 ~~~~~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~  174 (257)
T 3tpc_A          137 DADGERGVIVNTASIAAFDGQ------------------------------------------IGQAAYAASKGGVAALT  174 (257)
T ss_dssp             CTTSCCEEEEEECCTHHHHCC------------------------------------------TTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCeEEEEEechhhccCC------------------------------------------CCCcchHHHHHHHHHHH
Confidence                56899999998876543                                          56789999999999999


Q ss_pred             HHHHHhC--CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          235 RILAKRY--PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       235 ~~la~e~--~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      ++++.|+  .||+||+|+||+|+|++....                .+.+|++.++..+.++..  ...+|..+..+
T Consensus       175 ~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~--~~itG~~i~vd  249 (257)
T 3tpc_A          175 LPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICEN--TMLNGEVIRLD  249 (257)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEES
T ss_pred             HHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHccc--CCcCCcEEEEC
Confidence            9999998  489999999999999975321                134778888888777753  34555555443

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.7e-37  Score=276.54  Aligned_cols=223  Identities=23%  Similarity=0.223  Sum_probs=182.2

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC------------chhhHHHHHHHHhcCCCCcceeEEEeccCc
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD------------EKRGLEAVEKLKASGVDPELLLFHQLDISD   69 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~   69 (298)
                      ..+.+|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+...+..   +.++++|+++
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~   85 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSR---IVARQADVRD   85 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCC---EEEEECCTTC
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCe---EEEEeCCCCC
Confidence            35789999999999999999999999999999999987            55666666676665543   8999999999


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHH
Q 022357           70 LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE  149 (298)
Q Consensus        70 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  149 (298)
                      .++++++++++.+++|++|+||||||+....                           .+.++|++.+++|+.|++++++
T Consensus        86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~---------------------------~~~~~~~~~~~~N~~g~~~l~~  138 (278)
T 3sx2_A           86 RESLSAALQAGLDELGRLDIVVANAGIAPMS---------------------------AGDDGWHDVIDVNLTGVYHTIK  138 (278)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCS---------------------------STHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCC---------------------------CCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999999999999999986432                           1457888999999999999999


Q ss_pred             HHhhhhccCC-CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHH
Q 022357          150 ALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKA  228 (298)
Q Consensus       150 ~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  228 (298)
                      +++|.|++++ .|+||++||..+..+..                                      ...+....|++||+
T Consensus       139 ~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------~~~~~~~~Y~asKa  180 (278)
T 3sx2_A          139 VAIPTLVKQGTGGSIVLISSSAGLAGVG--------------------------------------SADPGSVGYVAAKH  180 (278)
T ss_dssp             HHHHHHHHHCSCEEEEEECCGGGTSCCC--------------------------------------CSSHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCcEEEEEccHHhcCCCc--------------------------------------cCCCCchHhHHHHH
Confidence            9999998754 68999999988765420                                      11134578999999


Q ss_pred             HHHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCCC-------------------------CCCChhhhhhhhhhhhccC
Q 022357          229 VINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA-------------------------GILSVEEGAESPVKLALLP  281 (298)
Q Consensus       229 al~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~~-------------------------~~~~~~~~a~~~~~~~~~~  281 (298)
                      |+++|+++++.|+  .+|+||+|+||+|+|++....                         ...+|++.++..+.++...
T Consensus       181 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~dvA~~v~~l~s~~  260 (278)
T 3sx2_A          181 GVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEVLAPEDVANAVAWLVSDQ  260 (278)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSSCSSBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcCcCcCCHHHHHHHHHHHhCcc
Confidence            9999999999999  489999999999999986421                         1236777777777777654


Q ss_pred             CCCCcceEecc
Q 022357          282 DGGPTGRFFLR  292 (298)
Q Consensus       282 ~~~~~~~~~l~  292 (298)
                      ....+|..+..
T Consensus       261 ~~~itG~~i~v  271 (278)
T 3sx2_A          261 ARYITGVTLPV  271 (278)
T ss_dssp             GTTCCSCEEEE
T ss_pred             cccccCCEEeE
Confidence            44555555543

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.5e-38  Score=276.95  Aligned_cols=222  Identities=24%  Similarity=0.248  Sum_probs=166.1

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +.+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..   +.++++|+++.++++++++++.
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT---AISVAVDVSDPESAKAMADRTL   81 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCE---EEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999988888888776543   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +.++++|+||||||+.....                    ...+.+.+.+.|++.+++|+.++++++++++|.|++++.|
T Consensus        82 ~~~g~id~li~~Ag~~~~~~--------------------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g  141 (253)
T 3qiv_A           82 AEFGGIDYLVNNAAIFGGMK--------------------LDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGG  141 (253)
T ss_dssp             HHHSCCCEEEECCCCCCGGG--------------------GGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE
T ss_pred             HHcCCCCEEEECCCcCCCCC--------------------CcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999853211                    1122346889999999999999999999999999888889


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+.                                             .....|++||+|+++|+++++.|+
T Consensus       142 ~iv~isS~~~~---------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~  176 (253)
T 3qiv_A          142 AIVNQSSTAAW---------------------------------------------LYSNYYGLAKVGINGLTQQLSREL  176 (253)
T ss_dssp             EEEEECC--------------------------------------------------------CCHHHHHHHHHHHHHHT
T ss_pred             EEEEECCcccc---------------------------------------------CCCchhHHHHHHHHHHHHHHHHHH
Confidence            99999997764                                             234679999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCC----------------CCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAG----------------ILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                        .+|+||+|+||+|+|++.....                ..+|++.++..+.++.......+|..|.
T Consensus       177 ~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~  244 (253)
T 3qiv_A          177 GGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQIFN  244 (253)
T ss_dssp             TTTTEEEEEEEC-------------------------------CCHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEE
Confidence              5899999999999999764321                2245566666555554433333444443

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=1.5e-38  Score=285.51  Aligned_cols=236  Identities=19%  Similarity=0.129  Sum_probs=180.0

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhhHHHHHHHH-hcCCCCcceeEEEeccCcHH-------
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLK-ASGVDPELLLFHQLDISDLA-------   71 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~-r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dls~~~-------   71 (298)
                      |+.+.+|++|||||++|||++++++|+++|++|++++ |+.++++...+++. ..+.   ++.++++|+++.+       
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~Dl~~~~~~~~~~~   80 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN---SAITVQADLSNVATAPVSGA   80 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT---CEEEEECCCSSSCBCCCC--
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCC---eeEEEEeecCCccccccccc
Confidence            6678899999999999999999999999999999999 99888888888886 3332   3889999999999       


Q ss_pred             ----------HHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhc
Q 022357           72 ----------SVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNY  141 (298)
Q Consensus        72 ----------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~  141 (298)
                                +++++++.+.+.++++|+||||||+....+..+. ++       ...+. .........+.|++.+++|+
T Consensus        81 ~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~-~~-------~~~~~-~~~~~~~~~~~~~~~~~~N~  151 (291)
T 1e7w_A           81 DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN-DE-------DGHEP-CVGDREAMETATADLFGSNA  151 (291)
T ss_dssp             --CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC----------------------HHHHHHHHHHHHHHT
T ss_pred             ccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhc-Cc-------ccccc-ccccccccHHHHHHHHHHHh
Confidence                      9999999999999999999999998654322110 00       00000 00011223788999999999


Q ss_pred             eeHHHHHHHHhhhhccCC------CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCC
Q 022357          142 YGTKQTCEALIPLLELSD------SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRG  215 (298)
Q Consensus       142 ~~~~~l~~~~~~~~~~~~------~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (298)
                      .++++++++++|.|++++      .|+||++||..+..+.                                        
T Consensus       152 ~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~----------------------------------------  191 (291)
T 1e7w_A          152 IAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL----------------------------------------  191 (291)
T ss_dssp             HHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC----------------------------------------
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCC----------------------------------------
Confidence            999999999999998766      6899999998876543                                        


Q ss_pred             CCCCCchhhhHHHHHHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCC-------------C--CCCChhhhhhhhhhhh
Q 022357          216 WCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFH-------------A--GILSVEEGAESPVKLA  278 (298)
Q Consensus       216 ~~~~~~~Y~~sK~al~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~-------------~--~~~~~~~~a~~~~~~~  278 (298)
                        ++...|++||+|+++|+++++.|+  .+|+||+|+||+|+|++ ..             .  ...+|++.++..++++
T Consensus       192 --~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~  268 (291)
T 1e7w_A          192 --LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLC  268 (291)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-GSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHH
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-cCCHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHh
Confidence              667899999999999999999998  48999999999999998 31             0  1235666666666655


Q ss_pred             ccCCCCCcceEec
Q 022357          279 LLPDGGPTGRFFL  291 (298)
Q Consensus       279 ~~~~~~~~~~~~l  291 (298)
                      .......+|..+.
T Consensus       269 s~~~~~itG~~i~  281 (291)
T 1e7w_A          269 SSKAKYITGTCVK  281 (291)
T ss_dssp             SGGGTTCCSCEEE
T ss_pred             CCcccCccCcEEE
Confidence            5433344444443

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=4e-38  Score=283.56  Aligned_cols=225  Identities=18%  Similarity=0.192  Sum_probs=179.9

Q ss_pred             CCcCCCcEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         1 m~~~~~~~vlITGas~--gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      |+.+.+|++|||||+|  |||+++|++|+++|++|++++|+.+..+...+.....+ .   +.+++||+++.++++++++
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~---~~~~~~Dv~d~~~v~~~~~  100 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG-V---KLTVPCDVSDAESVDNMFK  100 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT-C---CEEEECCTTCHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-C---eEEEEcCCCCHHHHHHHHH
Confidence            4567899999999997  99999999999999999999999765444433333332 2   6789999999999999999


Q ss_pred             HHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                      ++.+++|++|+||||||+.....                   .+.++.+.+.+.|++.+++|+.++++++++++|.|++ 
T Consensus       101 ~~~~~~g~iD~lVnnAG~~~~~~-------------------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-  160 (296)
T 3k31_A          101 VLAEEWGSLDFVVHAVAFSDKNE-------------------LKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN-  160 (296)
T ss_dssp             HHHHHHSCCSEEEECCCCCCHHH-------------------HTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-
T ss_pred             HHHHHcCCCCEEEECCCcCCccc-------------------ccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-
Confidence            99999999999999999874310                   0112334688999999999999999999999999965 


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                       .|+||++||..+..+.                                          +....|++||+|+++|+++++
T Consensus       161 -~g~IV~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la  197 (296)
T 3k31_A          161 -GGSILTLSYYGAEKVV------------------------------------------PHYNVMGVCKAALEASVKYLA  197 (296)
T ss_dssp             -CEEEEEEECGGGTSCC------------------------------------------TTTTHHHHHHHHHHHHHHHHH
T ss_pred             -CCEEEEEEehhhccCC------------------------------------------CCchhhHHHHHHHHHHHHHHH
Confidence             6899999998876543                                          667899999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      .|+  .+|+||+|+||+|+|++....                 ...+|++.++..++++.......+|..+..
T Consensus       198 ~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~v  270 (296)
T 3k31_A          198 VDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLGRGTTGETVHV  270 (296)
T ss_dssp             HHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCCEEEE
Confidence            999  589999999999999986432                 123666666666666654434444444433

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=2.6e-38  Score=279.67  Aligned_cols=216  Identities=19%  Similarity=0.170  Sum_probs=174.1

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+|++|||||++|||+++|++|+++|++|++++|+.+++.+...+.   +     +.++++|+++.++++++++.+
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-----~~~~~~Dv~~~~~v~~~~~~~   93 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA---G-----AVALYGDFSCETGIMAFIDLL   93 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH---T-----CEEEECCTTSHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc---C-----CeEEECCCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999987654433332   2     678999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||......                        .+.+.+.|++.+++|+.|+++++++++|+|++++.
T Consensus        94 ~~~~g~iD~lv~nAg~~~~~~------------------------~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~  149 (260)
T 3gem_A           94 KTQTSSLRAVVHNASEWLAET------------------------PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEV  149 (260)
T ss_dssp             HHHCSCCSEEEECCCCCCCCC------------------------TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSS
T ss_pred             HHhcCCCCEEEECCCccCCCC------------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999765432                        12467889999999999999999999999998888


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|+++|+++++.|
T Consensus       150 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e  187 (260)
T 3gem_A          150 ADIVHISDDVTRKGS------------------------------------------SKHIAYCATKAGLESLTLSFAAR  187 (260)
T ss_dssp             CEEEEECCGGGGTCC------------------------------------------SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEECChhhcCCC------------------------------------------CCcHhHHHHHHHHHHHHHHHHHH
Confidence            999999998876543                                          66789999999999999999999


Q ss_pred             C-CCcEEEEeeCCeeecCCCCCC-------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          241 Y-PKFCVNCVCPGFVKTDINFHA-------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       241 ~-~~i~vn~v~PG~v~t~~~~~~-------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      + ++|+||+|+||+|.|++....             ...+|++.++..+.++.  ....+|..+..
T Consensus       188 ~~~~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~v~~L~~--~~~itG~~i~v  251 (260)
T 3gem_A          188 FAPLVKVNGIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLLD--STYVTGTTLTV  251 (260)
T ss_dssp             HTTTCEEEEEEECTTCC---------------CCSCCCCCTHHHHHHHHHHHH--CSSCCSCEEEE
T ss_pred             HCCCCEEEEEeecccccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhh--CCCCCCCEEEE
Confidence            9 689999999999999864321             12378888888888773  23345555443

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=3.1e-38  Score=278.82  Aligned_cols=189  Identities=29%  Similarity=0.387  Sum_probs=163.6

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-hHHHHHHHHhc-CCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-GLEAVEKLKAS-GVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~-~~~~~~~~~~~-~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +++|++|||||++|||++++++|+++|++|++++|+.++ +++..+++... +..   +.++++|+++.++++++++++.
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~v~~~~~~~~   78 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK---VLYDGADLSKGEAVRGLVDNAV   78 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSC---EEEECCCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCc---EEEEECCCCCHHHHHHHHHHHH
Confidence            678999999999999999999999999999999999887 77777777653 332   8889999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ++++++|+||||||.....                       ++.+.+.+.|++.+++|+.++++++++++|.|++++.|
T Consensus        79 ~~~g~iD~lv~~Ag~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g  135 (260)
T 1x1t_A           79 RQMGRIDILVNNAGIQHTA-----------------------LIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFG  135 (260)
T ss_dssp             HHHSCCSEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred             HhcCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999999999999976432                       12235788999999999999999999999999877779


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|++.|+++++.|+
T Consensus       136 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~  173 (260)
T 1x1t_A          136 RIINIASAHGLVAS------------------------------------------ANKSAYVAAKHGVVGFTKVTALET  173 (260)
T ss_dssp             EEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECcHHhCcCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHh
Confidence            99999998876443                                          567899999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~  260 (298)
                        .+|+||+|+||+|+|++..
T Consensus       174 ~~~gi~v~~v~Pg~v~t~~~~  194 (260)
T 1x1t_A          174 AGQGITANAICPGWVRTPLVE  194 (260)
T ss_dssp             TTTTEEEEEEEECCBCC----
T ss_pred             ccCCEEEEEEeecCccCchHH
Confidence              4899999999999999753

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.4e-38  Score=276.49  Aligned_cols=185  Identities=25%  Similarity=0.275  Sum_probs=163.3

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +|++|||||++|||+++|++|+++|  ++|++++|+.+.+++..+++.      .++.++++|+++.++++++++++.++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG------DRFFYVVGDITEDSVLKQLVNAAVKG   75 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG------GGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC------CceEEEECCCCCHHHHHHHHHHHHHh
Confidence            6899999999999999999999985  789999999888777766652      13889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      +|++|+||||||+.....                      ++.+.+.++|++.+++|+.|+++++++++|.|++++ |+|
T Consensus        76 ~g~id~lvnnAg~~~~~~----------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~i  132 (254)
T 3kzv_A           76 HGKIDSLVANAGVLEPVQ----------------------NVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNV  132 (254)
T ss_dssp             HSCCCEEEEECCCCCCCT----------------------TTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEE
T ss_pred             cCCccEEEECCcccCCCC----------------------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeE
Confidence            999999999999854321                      223468899999999999999999999999998765 999


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      |++||..+..+.                                          +....|++||+|+++|+++++.|+++
T Consensus       133 v~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~  170 (254)
T 3kzv_A          133 VFVSSDACNMYF------------------------------------------SSWGAYGSSKAALNHFAMTLANEERQ  170 (254)
T ss_dssp             EEECCSCCCCSS------------------------------------------CCSHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             EEEcCchhccCC------------------------------------------CCcchHHHHHHHHHHHHHHHHhhccC
Confidence            999998877543                                          66889999999999999999999999


Q ss_pred             cEEEEeeCCeeecCCCCC
Q 022357          244 FCVNCVCPGFVKTDINFH  261 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~~  261 (298)
                      |+||+|+||+|+|++...
T Consensus       171 i~vn~v~PG~v~t~~~~~  188 (254)
T 3kzv_A          171 VKAIAVAPGIVDTDMQVN  188 (254)
T ss_dssp             SEEEEEECSSCCCCCSCC
T ss_pred             cEEEEEeCCcccchhHHH
Confidence            999999999999998754

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.6e-37  Score=278.08  Aligned_cols=222  Identities=21%  Similarity=0.224  Sum_probs=187.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-------hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-------RGLEAVEKLKASGVDPELLLFHQLDISDLASVSS   75 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~   75 (298)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+       .+++..+++...+..   +.++++|+++.+++++
T Consensus         6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ---ALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSE---EEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCc---EEEEECCCCCHHHHHH
Confidence            468999999999999999999999999999999999976       456667777665443   8999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhh
Q 022357           76 LADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL  155 (298)
Q Consensus        76 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  155 (298)
                      +++++.+++|++|+||||||+....+                       +.+.+.+.|++.+++|+.|+++++++++|.|
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  139 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAINLGS-----------------------IEEVPLKRFDLMNGIQVRGTYAVSQSCIPHM  139 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCC-----------------------TTTSCHHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            99999999999999999999875432                       2336889999999999999999999999999


Q ss_pred             ccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHH
Q 022357          156 ELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTR  235 (298)
Q Consensus       156 ~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~  235 (298)
                      ++++.|+||++||..+..+.                                         ++....|++||+|+++|++
T Consensus       140 ~~~~~g~iv~isS~~~~~~~-----------------------------------------~~~~~~Y~asKaal~~~~~  178 (285)
T 3sc4_A          140 KGRDNPHILTLSPPIRLEPK-----------------------------------------WLRPTPYMMAKYGMTLCAL  178 (285)
T ss_dssp             TTSSSCEEEECCCCCCCSGG-----------------------------------------GSCSHHHHHHHHHHHHHHH
T ss_pred             HHcCCcEEEEECChhhccCC-----------------------------------------CCCCchHHHHHHHHHHHHH
Confidence            98888999999998876431                                         1446889999999999999


Q ss_pred             HHHHhC--CCcEEEEeeCC-eeecCCCCC--------CCCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          236 ILAKRY--PKFCVNCVCPG-FVKTDINFH--------AGILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       236 ~la~e~--~~i~vn~v~PG-~v~t~~~~~--------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +|+.|+  .||+||+|+|| ++.|++...        ....+|++.++..+.++..+. ..+|..+..
T Consensus       179 ~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~~~~~~r~~~pedvA~~~~~l~s~~~-~~tG~~i~~  245 (285)
T 3sc4_A          179 GIAEELRDAGIASNTLWPRTTVATAAVQNLLGGDEAMARSRKPEVYADAAYVVLNKPS-SYTGNTLLC  245 (285)
T ss_dssp             HHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTSCCCCTTCBCTHHHHHHHHHHHTSCT-TCCSCEEEH
T ss_pred             HHHHHhcccCcEEEEEeCCCccccHHHHhhccccccccCCCCHHHHHHHHHHHhCCcc-cccceEEEE
Confidence            999999  58999999999 788876422        134588999999988887666 556665543

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=6.2e-38  Score=278.24  Aligned_cols=190  Identities=31%  Similarity=0.512  Sum_probs=166.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHH-HhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+.+|++|||||++|||++++++|+++|++|++++|+.+++++..+++ ...+..   +.++++|+++.++++++++++.
T Consensus        18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~---~~~~~~Dl~~~~~v~~~~~~~~   94 (267)
T 1vl8_A           18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE---TMAFRCDVSNYEEVKKLLEAVK   94 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCe---EEEEEcCCCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988888777777 333332   7889999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ++++++|+||||||+....                       ++.+.+.+.|++.+++|+.|+++++++++|.|++++.|
T Consensus        95 ~~~g~iD~lvnnAg~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g  151 (267)
T 1vl8_A           95 EKFGKLDTVVNAAGINRRH-----------------------PAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNP  151 (267)
T ss_dssp             HHHSCCCEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSC
T ss_pred             HHcCCCCEEEECCCcCCCC-----------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc
Confidence            9999999999999986432                       12235788999999999999999999999999887789


Q ss_pred             cEEEEccCc-ccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          162 RLVNLSSYV-SALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       162 ~iv~vsS~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      +||++||.. +..+.                                          +....|++||+|+++|+++++.|
T Consensus       152 ~iv~isS~~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e  189 (267)
T 1vl8_A          152 SIINIGSLTVEEVTM------------------------------------------PNISAYAASKGGVASLTKALAKE  189 (267)
T ss_dssp             EEEEECCGGGTCCCS------------------------------------------SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCcchhccCC------------------------------------------CCChhHHHHHHHHHHHHHHHHHH
Confidence            999999977 55332                                          56789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      +  .+|+||+|+||+|+|++..
T Consensus       190 ~~~~gi~v~~v~PG~v~T~~~~  211 (267)
T 1vl8_A          190 WGRYGIRVNVIAPGWYRTKMTE  211 (267)
T ss_dssp             HGGGTCEEEEEEECCBCSTTTH
T ss_pred             hcccCeEEEEEEeccCcccccc
Confidence            8  4899999999999999853

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.3e-37  Score=280.78  Aligned_cols=214  Identities=23%  Similarity=0.297  Sum_probs=186.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..   +.++++|+++.++++++++.+
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dv~d~~~v~~~~~~~  102 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFD---AHGVVCDVRHLDEMVRLADEA  102 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---eEEEEccCCCHHHHHHHHHHH
Confidence            45578999999999999999999999999999999999999999998888876543   899999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-  159 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-  159 (298)
                      .+.++++|+||||||+....+                       +.+.+.+++++.+++|+.|+++++++++|.|++++ 
T Consensus       103 ~~~~g~id~lvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~  159 (301)
T 3tjr_A          103 FRLLGGVDVVFSNAGIVVAGP-----------------------LAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGT  159 (301)
T ss_dssp             HHHHSSCSEEEECCCCCCCBC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS
T ss_pred             HHhCCCCCEEEECCCcCCCCC-----------------------cccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999875432                       22358889999999999999999999999998765 


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          ++...|++||+|+++|+++++.
T Consensus       160 ~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~  197 (301)
T 3tjr_A          160 GGHIAFTASFAGLVPN------------------------------------------AGLGTYGVAKYGVVGLAETLAR  197 (301)
T ss_dssp             CEEEEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEeCchhhcCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHH
Confidence            6899999998887553                                          6688999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCC-------------------------CCCCChhhhhhhhhhhhccCC
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFH-------------------------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~-------------------------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      |+  .||+||+|+||+|+|++...                         ....+|++.|+..+..+...+
T Consensus       198 e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          198 EVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILANR  267 (301)
T ss_dssp             HHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHHTC
T ss_pred             HhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcCC
Confidence            99  48999999999999987531                         024588999998888776543

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=3e-38  Score=280.99  Aligned_cols=189  Identities=31%  Similarity=0.350  Sum_probs=164.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+..   +.++++|+++.++++++++.+.+.
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN---VEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---eEEEECCCCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999998888888888765433   889999999999999999999999


Q ss_pred             c-CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           84 F-GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        84 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      + +++|+||||||.....+                       +.+.+.++|++.+++|+.++++++++++|.|++++.|+
T Consensus        96 ~~g~id~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~  152 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIHKE-----------------------AKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGN  152 (273)
T ss_dssp             TTSCCCEEEECCCCCCCCC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEE
T ss_pred             cCCCCcEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcE
Confidence            9 89999999999864332                       22357889999999999999999999999998777799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|++.|+++++.|+ 
T Consensus       153 iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~  190 (273)
T 1ae1_A          153 VIFLSSIAGFSAL------------------------------------------PSVSLYSASKGAINQMTKSLACEWA  190 (273)
T ss_dssp             EEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEEcCHhhcCCC------------------------------------------CCcchhHHHHHHHHHHHHHHHHHHh
Confidence            9999998876443                                          567899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~  260 (298)
                       .+|+||+|+||+|+|++..
T Consensus       191 ~~gi~v~~v~Pg~v~t~~~~  210 (273)
T 1ae1_A          191 KDNIRVNSVAPGVILTPLVE  210 (273)
T ss_dssp             GGTEEEEEEEECSBC-----
T ss_pred             hcCcEEEEEEeCCCcCchhh
Confidence             4999999999999999854

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=6.1e-38  Score=275.30  Aligned_cols=187  Identities=26%  Similarity=0.324  Sum_probs=158.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+++|++|||||++|||++++++|+++|++|++++|++ +++++   .++..+.   ++.++++|+++.++++++++++.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~   77 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGR---RVLTVKCDVSQPGDVEAFGKQVI   77 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTC---CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCC---cEEEEEeecCCHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999998 55544   3333332   38899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ++++++|+||||||.....+                       +.+.+.+.|++.+++|+.++++++++++|.|++++.|
T Consensus        78 ~~~g~id~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g  134 (249)
T 2ew8_A           78 STFGRCDILVNNAGIYPLIP-----------------------FDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWG  134 (249)
T ss_dssp             HHHSCCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred             HHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCe
Confidence            99999999999999864321                       2235788999999999999999999999999877779


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|++.|+++++.|+
T Consensus       135 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~  172 (249)
T 2ew8_A          135 RIINLTSTTYWLKI------------------------------------------EAYTHYISTKAANIGFTRALASDL  172 (249)
T ss_dssp             EEEEECCGGGGSCC------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcchhhccCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHH
Confidence            99999998876443                                          567899999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~  260 (298)
                        .+|+||+|+||+|+|++..
T Consensus       173 ~~~gi~v~~v~Pg~v~t~~~~  193 (249)
T 2ew8_A          173 GKDGITVNAIAPSLVRTATTE  193 (249)
T ss_dssp             GGGTEEEEEEEECCC------
T ss_pred             HhcCcEEEEEecCcCcCccch
Confidence              4899999999999999754

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=3.9e-38  Score=279.60  Aligned_cols=224  Identities=24%  Similarity=0.245  Sum_probs=184.5

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      +++.+|++|||||++|||+++|++|+++|++|++++ |+.+......+++...+..   +.++++|+++.++++++++.+
T Consensus        21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~v~~~~~~~   97 (269)
T 3gk3_A           21 SMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRD---FKAYAVDVADFESCERCAEKV   97 (269)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCC---CEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCc---eEEEEecCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999998 5555566666666554433   899999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||+....+                       +.+.+.++|++.+++|+.+++++++.++|.|++++.
T Consensus        98 ~~~~g~id~li~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  154 (269)
T 3gk3_A           98 LADFGKVDVLINNAGITRDAT-----------------------FMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRF  154 (269)
T ss_dssp             HHHHSCCSEEEECCCCCCCBC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHcCCCCEEEECCCcCCCcc-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999875432                       223578899999999999999999999999988778


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          ++...|++||+|+++|+++++.+
T Consensus       155 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e  192 (269)
T 3gk3_A          155 GRIVNIGSVNGSRGA------------------------------------------FGQANYASAKAGIHGFTKTLALE  192 (269)
T ss_dssp             EEEEEECCHHHHHCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCChhhccCC------------------------------------------CCcchHHHHHHHHHHHHHHHHHH
Confidence            999999998776443                                          66789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCC----------------CCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAG----------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +  .+|+||+|+||+|+|++.....                ..+|++.++..+.++.......+|..+..+
T Consensus       193 ~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vd  263 (269)
T 3gk3_A          193 TAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAIN  263 (269)
T ss_dssp             HGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEES
T ss_pred             hhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEEC
Confidence            8  4899999999999999864321                236788888877777665555666666544

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=5.2e-38  Score=279.09  Aligned_cols=224  Identities=24%  Similarity=0.261  Sum_probs=184.8

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      +++.+|++|||||++|||+++|++|+++|++|++++|+.. ..+...++++..+..   +.++++|+++.++++++++++
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~v~~~~~~~  101 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYK---AAVIKFDAASESDFIEAIQTI  101 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc---eEEEECCCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999544 455566666665443   899999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||+.....                       +.+.+.+++++.+++|+.+++++++.++|.|++++.
T Consensus       102 ~~~~g~id~li~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  158 (271)
T 4iin_A          102 VQSDGGLSYLVNNAGVVRDKL-----------------------AIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRF  158 (271)
T ss_dssp             HHHHSSCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             HHhcCCCCEEEECCCcCCCcc-----------------------cccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCC
Confidence            999999999999999875432                       223578899999999999999999999999988878


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          ++...|++||+|++.|+++++.+
T Consensus       159 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e  196 (271)
T 4iin_A          159 GSVVNVASIIGERGN------------------------------------------MGQTNYSASKGGMIAMSKSFAYE  196 (271)
T ss_dssp             EEEEEECCHHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEechhhcCCC------------------------------------------CCchHhHHHHHHHHHHHHHHHHH
Confidence            999999998776443                                          66789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +  .+|+||+|+||+|+|++....               ...+|++.++..+.++.......+|..+..+
T Consensus       197 ~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vd  266 (271)
T 4iin_A          197 GALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVN  266 (271)
T ss_dssp             HHTTTEEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeC
Confidence            8  699999999999999976432               1347788888877777655555566665544

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.2e-37  Score=276.33  Aligned_cols=226  Identities=21%  Similarity=0.234  Sum_probs=180.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...... ..+.++.+|+++.+++++++    +
T Consensus         7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~----~   81 (267)
T 3t4x_A            7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPD-AILQPVVADLGTEQGCQDVI----E   81 (267)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTT-CEEEEEECCTTSHHHHHHHH----H
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCC-ceEEEEecCCCCHHHHHHHH----H
Confidence            478999999999999999999999999999999999999988888888765422 23788999999999877665    4


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      +++++|+||||||.....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++.|+
T Consensus        82 ~~g~id~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~  138 (267)
T 3t4x_A           82 KYPKVDILINNLGIFEPVE-----------------------YFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGR  138 (267)
T ss_dssp             HCCCCSEEEECCCCCCCCC-----------------------GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEE
T ss_pred             hcCCCCEEEECCCCCCCCc-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCE
Confidence            5789999999999875432                       22357899999999999999999999999998888899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.|+ 
T Consensus       139 iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~  176 (267)
T 3t4x_A          139 VIFIASEAAIMPS------------------------------------------QEMAHYSATKTMQLSLSRSLAELTT  176 (267)
T ss_dssp             EEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEcchhhccCC------------------------------------------CcchHHHHHHHHHHHHHHHHHHHhC
Confidence            9999998877543                                          668899999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCC-------CCCCChhhhh---------hhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFH-------AGILSVEEGA---------ESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~-------~~~~~~~~~a---------~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                       .+|+||+|+||+|+|++...       ....++++..         ..|+++...|++.+....|++++.++|
T Consensus       177 ~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~  250 (267)
T 3t4x_A          177 GTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSA  250 (267)
T ss_dssp             TSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHSGGGTT
T ss_pred             CCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHHHcCccccC
Confidence             48999999999999985321       0111222211         123455555666666666666655543

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1e-37  Score=275.32  Aligned_cols=191  Identities=26%  Similarity=0.341  Sum_probs=167.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+..   +.++++|+++.++++++++.+.+
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLS---VTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---eEEEEccCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998888888887765433   88899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||......                      ++.+.+.+.|++.+++|+.++++++++++|.|++++.|+
T Consensus        88 ~~g~iD~lv~~Ag~~~~~~----------------------~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~  145 (260)
T 2zat_A           88 LHGGVDILVSNAAVNPFFG----------------------NIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGS  145 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCB----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEE
T ss_pred             HcCCCCEEEECCCCCCCCC----------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCE
Confidence            9999999999999753211                      122357888999999999999999999999998877799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|++.|+++++.|+ 
T Consensus       146 iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~  183 (260)
T 2zat_A          146 VLIVSSVGAYHPF------------------------------------------PNLGPYNVSKTALLGLTKNLAVELA  183 (260)
T ss_dssp             EEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEEechhhcCCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhc
Confidence            9999998776443                                          567899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~  260 (298)
                       .+|+||+|+||+++|++..
T Consensus       184 ~~gi~v~~v~Pg~v~t~~~~  203 (260)
T 2zat_A          184 PRNIRVNCLAPGLIKTNFSQ  203 (260)
T ss_dssp             GGTEEEEEEEECSBCSSTTH
T ss_pred             ccCeEEEEEEECcccCccch
Confidence             4899999999999999753

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=7e-38  Score=281.30  Aligned_cols=188  Identities=24%  Similarity=0.305  Sum_probs=162.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhh-HHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG-LEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+.. +...+.+...+..   +.++++|+++.++++++++++.
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~~~~  120 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVK---CVLLPGDLSDEQHCKDIVQETV  120 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCC---EEEEESCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCc---EEEEECCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999997754 3444444444433   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|++|+||||||......                      .+.+.+.++|++.+++|+.|+++++++++|+|++  .|
T Consensus       121 ~~~g~iD~lvnnAg~~~~~~----------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g  176 (291)
T 3ijr_A          121 RQLGSLNILVNNVAQQYPQQ----------------------GLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GD  176 (291)
T ss_dssp             HHHSSCCEEEECCCCCCCCS----------------------SGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TC
T ss_pred             HHcCCCCEEEECCCCcCCCC----------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CC
Confidence            99999999999999764321                      2234588999999999999999999999999963  58


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|+++|+++++.|+
T Consensus       177 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~  214 (291)
T 3ijr_A          177 VIINTASIVAYEGN------------------------------------------ETLIDYSATKGAIVAFTRSLSQSL  214 (291)
T ss_dssp             EEEEECCTHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEechHhcCCC------------------------------------------CCChhHHHHHHHHHHHHHHHHHHH
Confidence            99999998876543                                          567899999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCC
Q 022357          242 --PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~  259 (298)
                        .+|+||+|+||+|+|++.
T Consensus       215 ~~~gi~vn~v~PG~v~T~~~  234 (291)
T 3ijr_A          215 VQKGIRVNGVAPGPIWTPLI  234 (291)
T ss_dssp             GGGTCEEEEEEECSBCSTHH
T ss_pred             hhcCEEEEEEeeCCCcCCcc
Confidence              489999999999999974

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=5.4e-38  Score=276.98  Aligned_cols=222  Identities=24%  Similarity=0.233  Sum_probs=177.3

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.   .   .+.++++|+++.++++++++++.
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~~~D~~~~~~~~~~~~~~~   78 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG---D---AALAVAADISKEADVDAAVEAAL   78 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---T---TEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC---C---ceEEEEecCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999988877777652   1   28899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC--
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD--  159 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--  159 (298)
                      ++++++|+||||||......                      .+.+.+.+.|++.+++|+.++++++++++|.|++++  
T Consensus        79 ~~~g~id~li~~Ag~~~~~~----------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  136 (261)
T 3n74_A           79 SKFGKVDILVNNAGIGHKPQ----------------------NAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAK  136 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCSC----------------------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHT
T ss_pred             HhcCCCCEEEECCccCCCCC----------------------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999865321                      122357889999999999999999999999998653  


Q ss_pred             --CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH
Q 022357          160 --SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       160 --~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l  237 (298)
                        .++||++||..+..+.                                          +....|++||+|+++|++++
T Consensus       137 ~~~~~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~l  174 (261)
T 3n74_A          137 GQECVILNVASTGAGRPR------------------------------------------PNLAWYNATKGWVVSVTKAL  174 (261)
T ss_dssp             TCCEEEEEECCTTTTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEeCchhhcCCC------------------------------------------CCccHHHHHHHHHHHHHHHH
Confidence              5789999998876543                                          66788999999999999999


Q ss_pred             HHhC--CCcEEEEeeCCeeecCCCCCC-------------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          238 AKRY--PKFCVNCVCPGFVKTDINFHA-------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       238 a~e~--~~i~vn~v~PG~v~t~~~~~~-------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +.|+  .+|+||+|+||+++|++....                   ...+|++.++..+.++.......+|..+..+
T Consensus       175 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vd  251 (261)
T 3n74_A          175 AIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVD  251 (261)
T ss_dssp             HHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             HHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEec
Confidence            9998  589999999999999975421                   1346777777777777554445555555443

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=5.9e-38  Score=276.47  Aligned_cols=216  Identities=25%  Similarity=0.251  Sum_probs=177.6

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+|++|||||++|||++++++|+++|++|++++|+.++ .+..+++.       . .++++|+++.++++++++.+
T Consensus         1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-------~-~~~~~D~~~~~~~~~~~~~~   71 (256)
T 2d1y_A            1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-------G-AFFQVDLEDERERVRFVEEA   71 (256)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-------C-EEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-------C-CEEEeeCCCHHHHHHHHHHH
Confidence            788899999999999999999999999999999999999876 55555442       2 67899999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||.....+                       +.+.+.++|++.+++|+.++++++++++|.|++++.
T Consensus        72 ~~~~g~iD~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~  128 (256)
T 2d1y_A           72 AYALGRVDVLVNNAAIAAPGS-----------------------ALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGG  128 (256)
T ss_dssp             HHHHSCCCEEEECCCCCCCBC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTC
T ss_pred             HHHcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999864332                       223578889999999999999999999999988777


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|++.|+++++.|
T Consensus       129 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e  166 (256)
T 2d1y_A          129 GAIVNVASVQGLFAE------------------------------------------QENAAYNASKGGLVNLTRSLALD  166 (256)
T ss_dssp             EEEEEECCGGGTSBC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEccccccCCC------------------------------------------CCChhHHHHHHHHHHHHHHHHHH
Confidence            999999998876543                                          56789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCC-------C--------------CCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFH-------A--------------GILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~-------~--------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      +  .+|+||+|+||+++|++...       .              ...+|++.++..+.++.......+|..+
T Consensus       167 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~  239 (256)
T 2d1y_A          167 LAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAIL  239 (256)
T ss_dssp             HGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEE
Confidence            8  48999999999999986321       0              1246777777777666544333444444

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=7.5e-38  Score=276.31  Aligned_cols=221  Identities=27%  Similarity=0.318  Sum_probs=182.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.   .+.++++|+++.++++++++.+.+
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~   82 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF---KVEASVCDLSSRSERQELMNTVAN   82 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---EEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEcCCCCHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999888888888876543   388999999999999999999999


Q ss_pred             hc-CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           83 QF-GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        83 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ++ +++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++.|
T Consensus        83 ~~~g~id~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g  139 (260)
T 2ae2_A           83 HFHGKLNILVNNAGIVIYKE-----------------------AKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERG  139 (260)
T ss_dssp             HTTTCCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSE
T ss_pred             HcCCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc
Confidence            99 89999999999864321                       2235788999999999999999999999999887779


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|++.|+++++.|+
T Consensus       140 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~  177 (260)
T 2ae2_A          140 NVVFISSVSGALAV------------------------------------------PYEAVYGATKGAMDQLTRCLAFEW  177 (260)
T ss_dssp             EEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEcchhhccCC------------------------------------------CCcchHHHHHHHHHHHHHHHHHHH
Confidence            99999998776432                                          567899999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC--------------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA--------------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~--------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                        .+|+||+|+||+++|++....                    ...+|++.++..+.++.......+|..+.
T Consensus       178 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~  249 (260)
T 2ae2_A          178 AKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIY  249 (260)
T ss_dssp             GGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEE
Confidence              489999999999999863210                    12366666666666655433334444443

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=8.8e-37  Score=265.20  Aligned_cols=221  Identities=28%  Similarity=0.308  Sum_probs=188.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+.  ++.++++|+++.++++++++++.+.+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV--EVFYHHLDVSKAESVEEFSKKVLERF   78 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC--eEEEEEeccCCHHHHHHHHHHHHHhc
Confidence            3689999999999999999999999999999999999888888887633222  28999999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      +++|+||||||.....+                       +.+.+.++|++.+++|+.|+++++++++|.|++ +.+++|
T Consensus        79 g~id~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~~ii  134 (235)
T 3l77_A           79 GDVDVVVANAGLGYFKR-----------------------LEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKR-TGGLAL  134 (235)
T ss_dssp             SSCSEEEECCCCCCCCC-----------------------TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEE
T ss_pred             CCCCEEEECCccccccC-----------------------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcEE
Confidence            99999999999865432                       233588999999999999999999999999953 458999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCc
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF  244 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i  244 (298)
                      ++||..+..+.                                          +....|++||+|+++|+++++.+.++|
T Consensus       135 ~~sS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~l~~~~~~i  172 (235)
T 3l77_A          135 VTTSDVSARLI------------------------------------------PYGGGYVSTKWAARALVRTFQIENPDV  172 (235)
T ss_dssp             EECCGGGSSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred             EEecchhcccC------------------------------------------CCcchHHHHHHHHHHHHHHHhhcCCCe
Confidence            99997776443                                          567899999999999999998887899


Q ss_pred             EEEEeeCCeeecCCCCCC-------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          245 CVNCVCPGFVKTDINFHA-------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~~-------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +||+|+||+|+|++....       ...+|++.++..+.++..+.....+.+++.+
T Consensus       173 ~v~~v~PG~v~T~~~~~~~~~~~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~  228 (235)
T 3l77_A          173 RFFELRPGAVDTYFGGSKPGKPKEKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRS  228 (235)
T ss_dssp             EEEEEEECSBSSSTTTCCSCCCGGGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECC
T ss_pred             EEEEEeCCccccccccccCCcccccCCCCHHHHHHHHHHHHcCCCCCccceEEEee
Confidence            999999999999987542       2468999999999999888877777666654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.6e-37  Score=279.31  Aligned_cols=225  Identities=17%  Similarity=0.201  Sum_probs=174.8

Q ss_pred             CCcCCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         1 m~~~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      |..+.+|++|||||+  +|||+++|++|+++|++|++++|++.. .+..+++......   +.++++|+++.++++++++
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~  101 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRVEPLAEELGA---FVAGHCDVADAASIDAVFE  101 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHHHHHHTC---EEEEECCTTCHHHHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhcCC---ceEEECCCCCHHHHHHHHH
Confidence            456889999999999  459999999999999999999999643 3333444333222   7899999999999999999


Q ss_pred             HHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                      ++.+++|++|+||||||+.....                   ...++.+.+.+.|++.+++|+.++++++++++|.|++ 
T Consensus       102 ~~~~~~g~iD~lVnnAG~~~~~~-------------------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-  161 (293)
T 3grk_A          102 TLEKKWGKLDFLVHAIGFSDKDE-------------------LTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD-  161 (293)
T ss_dssp             HHHHHTSCCSEEEECCCCCCHHH-------------------HTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT-
T ss_pred             HHHHhcCCCCEEEECCccCCccc-------------------ccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence            99999999999999999874210                   0112334688999999999999999999999999964 


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                       .|+||++||..+..+.                                          +....|++||+|+++|+++++
T Consensus       162 -~g~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la  198 (293)
T 3grk_A          162 -GGSILTLTYYGAEKVM------------------------------------------PNYNVMGVAKAALEASVKYLA  198 (293)
T ss_dssp             -CEEEEEEECGGGTSBC------------------------------------------TTTTHHHHHHHHHHHHHHHHH
T ss_pred             -CCEEEEEeehhhccCC------------------------------------------CchHHHHHHHHHHHHHHHHHH
Confidence             6899999998876543                                          667899999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCCC-----------------CCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHAG-----------------ILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      .|+  .||+||+|+||+|+|++.....                 ..+|++.++..++++.......+|..+..
T Consensus       199 ~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~v  271 (293)
T 3grk_A          199 VDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHA  271 (293)
T ss_dssp             HHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCcceEEEE
Confidence            999  4899999999999999864321                 23666666666666654444445544443

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=2e-38  Score=281.40  Aligned_cols=206  Identities=22%  Similarity=0.294  Sum_probs=174.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+++++.       ...  .+.++++|+++.++++++++.+.+.
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-------~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL-------NLP--NTLCAQVDVTDKYTFDTAITRAEKI   84 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT-------CCT--TEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh-------hcC--CceEEEecCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999997654332       111  3889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      +|++|+||||||+....+                       +.+.+.+.|++.+++|+.|+++++++++|.|++++.|+|
T Consensus        85 ~g~iD~lvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~I  141 (266)
T 3p19_A           85 YGPADAIVNNAGMMLLGQ-----------------------IDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTI  141 (266)
T ss_dssp             HCSEEEEEECCCCCCCCC-----------------------TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             CCCCCEEEECCCcCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEE
Confidence            999999999999875432                       223578999999999999999999999999988778999


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+.                                          +....|++||+|+++|+++++.|+  
T Consensus       142 V~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~  179 (266)
T 3p19_A          142 INISSIAGKKTF------------------------------------------PDHAAYCGTKFAVHAISENVREEVAA  179 (266)
T ss_dssp             EEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             EEEcChhhCCCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhcc
Confidence            999998876543                                          667899999999999999999998  


Q ss_pred             CCcEEEEeeCCeeecCCCCCCC-----------------CCChhhhhhhhhhhhccCCC
Q 022357          242 PKFCVNCVCPGFVKTDINFHAG-----------------ILSVEEGAESPVKLALLPDG  283 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~  283 (298)
                      .||+||+|+||+|+|++.....                 ..+|++.++..++++..+..
T Consensus       180 ~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~  238 (266)
T 3p19_A          180 SNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQN  238 (266)
T ss_dssp             GTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred             cCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCC
Confidence            5899999999999999864321                 34667777777776665554

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=1.1e-37  Score=275.38  Aligned_cols=191  Identities=19%  Similarity=0.139  Sum_probs=166.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||++|||++++++|+++|++|++++|+.+++++..+++...... ..+.++++|+++.++++++++++.+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSG-AQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC-CeEEEEEccCCCHHHHHHHHHHHHH
Confidence            378899999999999999999999999999999999988888877777643111 1288999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      +++ +|+||||||.....                       ++.+.+.+.|++.+++|+.++++++++++|.|++++.|+
T Consensus        83 ~~g-id~lv~~Ag~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~  138 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPRPG-----------------------RFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGR  138 (260)
T ss_dssp             TTC-CSEEEECCCCCCCB-----------------------CGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEE
T ss_pred             hcC-CCEEEECCCCCCCC-----------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcE
Confidence            999 99999999976432                       122357889999999999999999999999998777799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|++.|+++++.|+ 
T Consensus       139 iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~  176 (260)
T 2z1n_A          139 MVYIGSVTLLRPW------------------------------------------QDLALSNIMRLPVIGVVRTLALELA  176 (260)
T ss_dssp             EEEECCGGGTSCC------------------------------------------TTBHHHHHHTHHHHHHHHHHHHHHG
T ss_pred             EEEECchhhcCCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHh
Confidence            9999998876443                                          567899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~  260 (298)
                       .+|+||+|+||+|+|++..
T Consensus       177 ~~gi~v~~v~Pg~v~t~~~~  196 (260)
T 2z1n_A          177 PHGVTVNAVLPSLILTDRVR  196 (260)
T ss_dssp             GGTEEEEEEEECHHHHCCCC
T ss_pred             hhCeEEEEEEECCcccchhh
Confidence             4899999999999999864

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=4.8e-38  Score=277.25  Aligned_cols=186  Identities=26%  Similarity=0.340  Sum_probs=164.2

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh--hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR--GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +|++|||||++|||++++++|+++|++|++++|+.++  +++..++++..+.   ++.++++|+++.++++++++++.++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQ---KAVFVGLDVTDKANFDSAIDEAAEK   78 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTC---CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999877  7777777765443   3889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC-Cc
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS-PR  162 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~  162 (298)
                      ++++|+||||||.....                       ++.+.+.++|++.+++|+.++++++++++|.|++++. |+
T Consensus        79 ~g~iD~lv~nAg~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~  135 (258)
T 3a28_C           79 LGGFDVLVNNAGIAQIK-----------------------PLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGK  135 (258)
T ss_dssp             HTCCCEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCE
T ss_pred             hCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcE
Confidence            99999999999986432                       1223578899999999999999999999999987666 89


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.|+ 
T Consensus       136 iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~  173 (258)
T 3a28_C          136 IINAASIAAIQGF------------------------------------------PILSAYSTTKFAVRGLTQAAAQELA  173 (258)
T ss_dssp             EEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEECcchhccCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHHH
Confidence            9999998776443                                          567899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCC
Q 022357          242 -PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~  259 (298)
                       .+|+||+|+||+|+|++.
T Consensus       174 ~~gi~vn~v~PG~v~t~~~  192 (258)
T 3a28_C          174 PKGHTVNAYAPGIVGTGMW  192 (258)
T ss_dssp             GGTCEEEEEEECCBCSHHH
T ss_pred             hhCeEEEEEECCccCChhh
Confidence             489999999999999864

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=9.4e-37  Score=277.43  Aligned_cols=216  Identities=22%  Similarity=0.300  Sum_probs=181.1

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+++.+|++|||||+||||+++|++|+++|++|++++|+.+++++..+++...+.. ..+.++++|+++.++++++++.+
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~   81 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSG-PEVMGVQLDVASREGFKMAADEV   81 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-CeEEEEECCCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999988888888765431 23899999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC--
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS--  158 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--  158 (298)
                      .+.++++|+||||||+....                       ++.+.+.+.+++.+++|+.|+++++++++|.|.++  
T Consensus        82 ~~~~g~id~lv~nAg~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  138 (319)
T 3ioy_A           82 EARFGPVSILCNNAGVNLFQ-----------------------PIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVK  138 (319)
T ss_dssp             HHHTCCEEEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCEEEECCCcCCCC-----------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhh
Confidence            99999999999999986543                       22346888999999999999999999999999764  


Q ss_pred             ----CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHH
Q 022357          159 ----DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT  234 (298)
Q Consensus       159 ----~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~  234 (298)
                          +.|+||++||..+..+.                                          +....|++||+|+++|+
T Consensus       139 ~~~~~~g~iV~isS~a~~~~~------------------------------------------~~~~~Y~aSKaal~~~~  176 (319)
T 3ioy_A          139 AGEQKGGHVVNTASMAAFLAA------------------------------------------GSPGIYNTTKFAVRGLS  176 (319)
T ss_dssp             TTSCCCCEEEEECCGGGTCCC------------------------------------------SSSHHHHHHHHHHHHHH
T ss_pred             ccCCCCcEEEEecccccccCC------------------------------------------CCCHHHHHHHHHHHHHH
Confidence                56899999998887553                                          66789999999999999


Q ss_pred             HHHHHhC--CCcEEEEeeCCeeecCCCCCCC---------------------------CCChhhhhhhhhhhhccCC
Q 022357          235 RILAKRY--PKFCVNCVCPGFVKTDINFHAG---------------------------ILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       235 ~~la~e~--~~i~vn~v~PG~v~t~~~~~~~---------------------------~~~~~~~a~~~~~~~~~~~  282 (298)
                      ++++.|+  .+|+|++|+||+|+|++.....                           ..+|++.++..+..+..++
T Consensus       177 ~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          177 ESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             HHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcCC
Confidence            9999998  4899999999999998764210                           1578888888887776543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=3.2e-38  Score=281.45  Aligned_cols=223  Identities=26%  Similarity=0.365  Sum_probs=184.4

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+++|++|||||++|||++++++|+++|++|++++|+++++++..++++..+..   +.++++|+++.++++++++.+
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dv~~~~~v~~~~~~~   93 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE---ADGRTCDVRSVPEIEALVAAV   93 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---eEEEECCCCCHHHHHHHHHHH
Confidence            55688999999999999999999999999999999999998888888888765433   889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhh--hccC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL--LELS  158 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~--~~~~  158 (298)
                      .+.++++|+||||||.....+                       +.+.+.++|++.+++|+.|+++++++++|.  |+++
T Consensus        94 ~~~~g~iD~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~  150 (277)
T 2rhc_B           94 VERYGPVDVLVNNAGRPGGGA-----------------------TAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER  150 (277)
T ss_dssp             HHHTCSCSEEEECCCCCCCSC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHH
T ss_pred             HHHhCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhc
Confidence            999999999999999764321                       223578899999999999999999999999  8776


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                      +.|+||++||..+..+.                                          +....|++||+|++.|+++++
T Consensus       151 ~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la  188 (277)
T 2rhc_B          151 GTGRIVNIASTGGKQGV------------------------------------------VHAAPYSASKHGVVGFTKALG  188 (277)
T ss_dssp             TEEEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEECccccccCC------------------------------------------CCCccHHHHHHHHHHHHHHHH
Confidence            67899999998776443                                          567899999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCC--------------------------CCCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFH--------------------------AGILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~--------------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      .|+  .+|+||+|+||+|+|++...                          ..+.+|++.++..+.++..+....+|..+
T Consensus       189 ~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~  268 (277)
T 2rhc_B          189 LELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQAL  268 (277)
T ss_dssp             HHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEE
Confidence            998  48999999999999986321                          01346677777766666544334444444


Q ss_pred             c
Q 022357          291 L  291 (298)
Q Consensus       291 l  291 (298)
                      .
T Consensus       269 ~  269 (277)
T 2rhc_B          269 N  269 (277)
T ss_dssp             E
T ss_pred             E
Confidence            3

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.3e-36  Score=279.47  Aligned_cols=222  Identities=23%  Similarity=0.288  Sum_probs=188.2

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-------hHHHHHHHHhcCCCCcceeEEEeccCcHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-------GLEAVEKLKASGVDPELLLFHQLDISDLASVS   74 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~   74 (298)
                      ..+.+|++|||||++|||+++|++|+++|++|++++|+.++       +....+++...+..   +.++++|+++.++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~---~~~~~~Dv~d~~~v~  117 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK---ALPCIVDVRDEQQIS  117 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCE---EEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCe---EEEEEccCCCHHHHH
Confidence            35789999999999999999999999999999999999764       45666777665543   889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhh
Q 022357           75 SLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL  154 (298)
Q Consensus        75 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  154 (298)
                      ++++++.+++|++|+||||||+....+                       +.+.+.+.|++.+++|+.|+++++++++|.
T Consensus       118 ~~~~~~~~~~g~iDilVnnAG~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~  174 (346)
T 3kvo_A          118 AAVEKAIKKFGGIDILVNNASAISLTN-----------------------TLDTPTKRLDLMMNVNTRGTYLASKACIPY  174 (346)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCC-----------------------TTTCCHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            999999999999999999999875432                       223578999999999999999999999999


Q ss_pred             hccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHH
Q 022357          155 LELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT  234 (298)
Q Consensus       155 ~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~  234 (298)
                      |++++.|+||++||..+..+.                                        +.+....|++||+|+++|+
T Consensus       175 m~~~~~g~IV~iSS~~~~~~~----------------------------------------~~~~~~~Y~aSKaal~~l~  214 (346)
T 3kvo_A          175 LKKSKVAHILNISPPLNLNPV----------------------------------------WFKQHCAYTIAKYGMSMYV  214 (346)
T ss_dssp             HTTCSSCEEEEECCCCCCCGG----------------------------------------GTSSSHHHHHHHHHHHHHH
T ss_pred             HHHCCCCEEEEECCHHHcCCC----------------------------------------CCCCchHHHHHHHHHHHHH
Confidence            998888999999998876431                                        1256789999999999999


Q ss_pred             HHHHHhC-CCcEEEEeeCCe-eecCCCCC-------CCCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          235 RILAKRY-PKFCVNCVCPGF-VKTDINFH-------AGILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       235 ~~la~e~-~~i~vn~v~PG~-v~t~~~~~-------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      ++++.|+ .+|+||+|+||+ +.|++...       ....+|++.++..+.++.. ....+|.++
T Consensus       215 ~~la~e~~~gIrvn~v~PG~~i~T~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~~itG~~i  278 (346)
T 3kvo_A          215 LGMAEEFKGEIAVNALWPKTAIHTAAMDMLGGPGIESQCRKVDIIADAAYSIFQK-PKSFTGNFV  278 (346)
T ss_dssp             HHHHHHTTTTCEEEEEECSBCBCCHHHHHHCC--CGGGCBCTHHHHHHHHHHHTS-CTTCCSCEE
T ss_pred             HHHHHHhcCCcEEEEEeCCCccccHHHHhhccccccccCCCHHHHHHHHHHHHhc-CCCCCceEE
Confidence            9999999 699999999995 88875422       1246889999999988877 555666666

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=1.1e-37  Score=275.91  Aligned_cols=226  Identities=23%  Similarity=0.229  Sum_probs=182.4

Q ss_pred             CcCCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhh-HHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRG-LEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         2 ~~~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      .++++|++|||||+  +|||+++|++|+++|++|++++|+..+. .+.++++....+.  ++.++++|+++.++++++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~v~~~~~   93 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGI--KAKAYKCQVDSYESCEKLVK   93 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCC--CEECCBCCTTCHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCC--ceeEEecCCCCHHHHHHHHH
Confidence            35789999999999  9999999999999999999999887654 6666666643222  28899999999999999999


Q ss_pred             HHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                      ++.+.++++|+||||||+....+                       +.+.+.+.|++.+++|+.++++++++++|.|+++
T Consensus        94 ~~~~~~g~id~li~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~  150 (267)
T 3gdg_A           94 DVVADFGQIDAFIANAGATADSG-----------------------ILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER  150 (267)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCSC-----------------------TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCEEEECCCcCCCCC-----------------------cccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc
Confidence            99999999999999999875432                       2235789999999999999999999999999887


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                      +.|+||++||..+..+.                                        .++....|++||+|++.|+++++
T Consensus       151 ~~g~iv~isS~~~~~~~----------------------------------------~~~~~~~Y~~sK~a~~~~~~~la  190 (267)
T 3gdg_A          151 GTGSLVITASMSGHIAN----------------------------------------FPQEQTSYNVAKAGCIHMARSLA  190 (267)
T ss_dssp             TCCEEEEECCGGGTSCC----------------------------------------SSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEccccccccC----------------------------------------CCCCCCcchHHHHHHHHHHHHHH
Confidence            78999999998876432                                        11457899999999999999999


Q ss_pred             HhC-CCcEEEEeeCCeeecCCCCCCC---------------CCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          239 KRY-PKFCVNCVCPGFVKTDINFHAG---------------ILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       239 ~e~-~~i~vn~v~PG~v~t~~~~~~~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      .|+ +.|+||+|+||+|+|++.....               ..+|++.++..+.++.......+|..+..
T Consensus       191 ~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~v  260 (267)
T 3gdg_A          191 NEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFASDASTYTTGADLLI  260 (267)
T ss_dssp             HHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEE
T ss_pred             HHhccCcEEEEEECCccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhHhheeecCccccccCCEEEE
Confidence            999 4599999999999999865321               12456666666665554444444444443

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-38  Score=275.75  Aligned_cols=186  Identities=24%  Similarity=0.372  Sum_probs=164.6

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+..   +.++++|+++.++++++++++.++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH---AVAVKVDVSDRDQVFAAVEQARKTLG   78 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            689999999999999999999999999999999988888888887765433   88999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-CCcEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPRLV  164 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv  164 (298)
                      ++|+||||||.....                       ++.+.+.+.|++.+++|+.++++++++++|.|++++ .|+||
T Consensus        79 ~id~lv~nAg~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv  135 (256)
T 1geg_A           79 GFDVIVNNAGVAPST-----------------------PIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKII  135 (256)
T ss_dssp             CCCEEEECCCCCCCB-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred             CCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence            999999999976432                       122357889999999999999999999999998766 68999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||..+..+.                                          +....|++||+|+++|+++++.|+  .
T Consensus       136 ~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~  173 (256)
T 1geg_A          136 NACSQAGHVGN------------------------------------------PELAVYSSSKFAVRGLTQTAARDLAPL  173 (256)
T ss_dssp             EECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             EECchhhcCCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHHHHc
Confidence            99998776543                                          567899999999999999999998  4


Q ss_pred             CcEEEEeeCCeeecCCC
Q 022357          243 KFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~  259 (298)
                      +|+||+|+||+|+|++.
T Consensus       174 gi~v~~v~PG~v~t~~~  190 (256)
T 1geg_A          174 GITVNGYCPGIVKTPMW  190 (256)
T ss_dssp             TEEEEEEEECSBSSHHH
T ss_pred             CeEEEEEEECCCccchh
Confidence            89999999999999863

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=2.3e-36  Score=267.08  Aligned_cols=189  Identities=27%  Similarity=0.366  Sum_probs=166.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhc-CCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-GVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++... +..   +.++++|+++.++++++++++.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~   80 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVR---VLEVAVDVATPEGVDAVVESVR   80 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCC---EEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCc---eEEEEcCCCCHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999988888777777654 332   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +.++++|+||||||.....+                       +.+.+.+.|++.+++|+.++++++++++|.|++++.|
T Consensus        81 ~~~g~id~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g  137 (263)
T 3ai3_A           81 SSFGGADILVNNAGTGSNET-----------------------IMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGG  137 (263)
T ss_dssp             HHHSSCSEEEECCCCCCCCC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred             HHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc
Confidence            99999999999999864322                       2235788899999999999999999999999877779


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|++.|+++++.|+
T Consensus       138 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~  175 (263)
T 3ai3_A          138 AIIHNASICAVQPL------------------------------------------WYEPIYNVTKAALMMFSKTLATEV  175 (263)
T ss_dssp             EEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECchhhcCCC------------------------------------------CCcchHHHHHHHHHHHHHHHHHHh
Confidence            99999998876443                                          557899999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCC
Q 022357          242 --PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~  259 (298)
                        .+|+||+|+||+|+|++.
T Consensus       176 ~~~gi~v~~v~Pg~v~t~~~  195 (263)
T 3ai3_A          176 IKDNIRVNCINPGLILTPDW  195 (263)
T ss_dssp             GGGTEEEEEEEECCBCCHHH
T ss_pred             hhcCcEEEEEecCcccCcch
Confidence              589999999999999863

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=2.4e-38  Score=281.21  Aligned_cols=211  Identities=30%  Similarity=0.364  Sum_probs=174.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||++|||+++|++|+++|++|++++|+.+..          ..   ....+++|+++.++++++++.+.+
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~---~~~~~~~Dv~~~~~v~~~~~~~~~   77 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VN---VSDHFKIDVTNEEEVKEAVEKTTK   77 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TT---SSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cC---ceeEEEecCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999987643          11   267889999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .+|++|+||||||+....+                       +.+.+.+.|++.+++|+.|+++++++++|.|++++.|+
T Consensus        78 ~~g~iD~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~  134 (269)
T 3vtz_A           78 KYGRIDILVNNAGIEQYSP-----------------------LHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGS  134 (269)
T ss_dssp             HHSCCCEEEECCCCCCCCC-----------------------GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             HcCCCCEEEECCCcCCCCC-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCE
Confidence            9999999999999865432                       23358899999999999999999999999998877899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.|+ 
T Consensus       135 iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~  172 (269)
T 3vtz_A          135 IINIASVQSYAAT------------------------------------------KNAAAYVTSKHALLGLTRSVAIDYA  172 (269)
T ss_dssp             EEEECCGGGTSBC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEECchhhccCC------------------------------------------CCChhHHHHHHHHHHHHHHHHHHhc
Confidence            9999998876543                                          667899999999999999999998 


Q ss_pred             CCcEEEEeeCCeeecCCCCCC--------------------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          242 PKFCVNCVCPGFVKTDINFHA--------------------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~--------------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      ++|+||+|+||+|+|++....                          ...+|++.++..+.++.......+|..+.
T Consensus       173 ~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~  248 (269)
T 3vtz_A          173 PKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLT  248 (269)
T ss_dssp             TTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             CCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEE
Confidence            689999999999999874210                          12366777776666665444444444443

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-37  Score=284.16  Aligned_cols=237  Identities=19%  Similarity=0.121  Sum_probs=182.2

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhhHHHHHHHH-hcCCCCcceeEEEeccCcHH-------
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLK-ASGVDPELLLFHQLDISDLA-------   71 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~-r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dls~~~-------   71 (298)
                      |..+.+|++|||||++|||+++|++|+++|++|++++ |+.+++++..+++. ..+.   ++.++++|+++.+       
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~Dl~d~~~~~~~~~  117 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN---SAITVQADLSNVATAPVSGA  117 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT---CEEEEECCCSSSCBCC----
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCC---eEEEEEeeCCCchhcccccc
Confidence            4457889999999999999999999999999999999 99888888888876 3332   3889999999999       


Q ss_pred             ----------HHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhc
Q 022357           72 ----------SVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNY  141 (298)
Q Consensus        72 ----------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~  141 (298)
                                +++++++.+.+.++++|+||||||+....+..+.        +...++..+ .......+.|++.+++|+
T Consensus       118 ~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~--------~~~~~e~~~-~~~~~~~~~~~~~~~vN~  188 (328)
T 2qhx_A          118 DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN--------DEDGHEPCV-GDREAMETATADLFGSNA  188 (328)
T ss_dssp             ---CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC----------------------CHHHHHHHHHHHHHT
T ss_pred             ccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhc--------Ccccccccc-ccccccHHHHHHHHHHHH
Confidence                      9999999999999999999999998754322110        000000000 011123788999999999


Q ss_pred             eeHHHHHHHHhhhhccCC------CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCC
Q 022357          142 YGTKQTCEALIPLLELSD------SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRG  215 (298)
Q Consensus       142 ~~~~~l~~~~~~~~~~~~------~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (298)
                      .++++++++++|.|++++      .|+||++||..+..+.                                        
T Consensus       189 ~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~----------------------------------------  228 (328)
T 2qhx_A          189 IAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL----------------------------------------  228 (328)
T ss_dssp             HHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCC----------------------------------------
T ss_pred             HHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCC----------------------------------------
Confidence            999999999999998766      6899999998876443                                        


Q ss_pred             CCCCCchhhhHHHHHHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhh
Q 022357          216 WCPHSSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLA  278 (298)
Q Consensus       216 ~~~~~~~Y~~sK~al~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~  278 (298)
                        ++...|++||+|++.|+++|+.|+  .+|+||+|+||+|+|++ ...               .+.+|++.++..+.++
T Consensus       229 --~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~  305 (328)
T 2qhx_A          229 --LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLC  305 (328)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHH
T ss_pred             --CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cccHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHh
Confidence              667899999999999999999999  48999999999999998 221               2346777777777766


Q ss_pred             ccCCCCCcceEecc
Q 022357          279 LLPDGGPTGRFFLR  292 (298)
Q Consensus       279 ~~~~~~~~~~~~l~  292 (298)
                      .......+|..+..
T Consensus       306 s~~~~~itG~~i~v  319 (328)
T 2qhx_A          306 SSKAKYITGTCVKV  319 (328)
T ss_dssp             SGGGTTCCSCEEEE
T ss_pred             CccccCccCcEEEE
Confidence            54444445555443

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2e-36  Score=265.08  Aligned_cols=216  Identities=25%  Similarity=0.207  Sum_probs=178.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++   +     +.++++|+++.++++++++.+.+
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-----~~~~~~D~~~~~~~~~~~~~~~~   73 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G-----AHPVVMDVADPASVERGFAEALA   73 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T-----CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C-----CEEEEecCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999987666554433   1     67889999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||.....                       ++.+.+.+.|++.+++|+.++++++++++|.|++++.|+
T Consensus        74 ~~g~id~lvn~Ag~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~  130 (245)
T 1uls_A           74 HLGRLDGVVHYAGITRDN-----------------------FHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGS  130 (245)
T ss_dssp             HHSSCCEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEE
T ss_pred             HcCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCE
Confidence            999999999999986432                       122357889999999999999999999999998877799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||.. ..+.                                          ++...|++||+|+.+|+++++.|+ 
T Consensus       131 iv~isS~~-~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~  167 (245)
T 1uls_A          131 IVLTASRV-YLGN------------------------------------------LGQANYAASMAGVVGLTRTLALELG  167 (245)
T ss_dssp             EEEECCGG-GGCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEEccch-hcCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHHh
Confidence            99999976 4332                                          557899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                       .+|+||+|+||+|+|++....               .+.+|++.++..+.++.......+|..+..
T Consensus       168 ~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~v  234 (245)
T 1uls_A          168 RWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFV  234 (245)
T ss_dssp             GGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEE
Confidence             489999999999999986431               134677777777776665444445555443

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=1.2e-37  Score=275.96  Aligned_cols=225  Identities=24%  Similarity=0.246  Sum_probs=184.1

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |+.+++|++|||||++|||+++|++|+++|++|+++ .|+.+.+.+..+++...+..   +.++++|+++.++++++++.
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dl~~~~~~~~~~~~   97 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGN---GRLLSFDVANREQCREVLEH   97 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCc---eEEEEecCCCHHHHHHHHHH
Confidence            345788999999999999999999999999999765 56777778888888776544   89999999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhc-cC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE-LS  158 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~  158 (298)
                      +.+.++++|+||||||.....+                       +.+.+.+++++.+++|+.+++++++.+++.|. ++
T Consensus        98 ~~~~~g~id~li~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~  154 (267)
T 4iiu_A           98 EIAQHGAWYGVVSNAGIARDAA-----------------------FPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGAR  154 (267)
T ss_dssp             HHHHHCCCSEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHhCCccEEEECCCCCCCCc-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999875432                       22358889999999999999999999988885 55


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                      +.|+||++||..+..+.                                          ++...|++||+|+++|+++++
T Consensus       155 ~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la  192 (267)
T 4iiu_A          155 QGGRIITLSSVSGVMGN------------------------------------------RGQVNYSAAKAGIIGATKALA  192 (267)
T ss_dssp             SCEEEEEECCHHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEcchHhccCC------------------------------------------CCCchhHHHHHHHHHHHHHHH
Confidence            67899999998776543                                          667899999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCC--------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHA--------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~--------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      .|+  .+|+||+|+||+|+|++....              ...+|++.++..+.++.......+|..+..+
T Consensus       193 ~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~~~itG~~i~vd  263 (267)
T 4iiu_A          193 IELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISIN  263 (267)
T ss_dssp             HHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCccCCEEEeC
Confidence            999  489999999999999986432              1346777777777777655455555555443

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.8e-37  Score=277.94  Aligned_cols=232  Identities=20%  Similarity=0.147  Sum_probs=178.4

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhhHHHHHHHH-hcCCCCcceeEEEeccCc----HHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLK-ASGVDPELLLFHQLDISD----LASVSS   75 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~-~~~~~~~~~~~-~~~~~~~~~~~~~~Dls~----~~~v~~   75 (298)
                      ..+.+|++|||||++|||+++|++|+++|++|++++|+. +++++..+++. ..+.   ++.++++|+++    .+++++
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~---~~~~~~~Dv~~~~~~~~~v~~   95 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN---TAVVCQADLTNSNVLPASCEE   95 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTT---CEEEEECCCSCSTTHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCC---ceEEEEeecCCccCCHHHHHH
Confidence            346789999999999999999999999999999999998 77777777776 3332   38899999999    999999


Q ss_pred             HHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhh
Q 022357           76 LADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL  155 (298)
Q Consensus        76 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  155 (298)
                      +++.+.+.++++|+||||||+....+..+..          ..+..   ....+.+.|++.+++|+.++++++++++|.|
T Consensus        96 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~----------~~~~~---~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~  162 (288)
T 2x9g_A           96 IINSCFRAFGRCDVLVNNASAFYPTPLVQGD----------HEDNS---NGKTVETQVAELIGTNAIAPFLLTMSFAQRQ  162 (288)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCSCCC---------------------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCcccccc----------chhcc---cccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            9999999999999999999986543221000          00000   0014778999999999999999999999999


Q ss_pred             ccCC------CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHH
Q 022357          156 ELSD------SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAV  229 (298)
Q Consensus       156 ~~~~------~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a  229 (298)
                      ++++      .|+||++||..+..+.                                          +....|++||+|
T Consensus       163 ~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa  200 (288)
T 2x9g_A          163 KGTNPNCTSSNLSIVNLCDAMVDQPC------------------------------------------MAFSLYNMGKHA  200 (288)
T ss_dssp             --------CCCEEEEEECCTTTTSCC------------------------------------------TTCHHHHHHHHH
T ss_pred             hhcCCCCCCCCeEEEEEecccccCCC------------------------------------------CCCchHHHHHHH
Confidence            8765      6899999998876443                                          667899999999


Q ss_pred             HHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCC-------------C-CC-CChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          230 INAYTRILAKRY--PKFCVNCVCPGFVKTDINFH-------------A-GI-LSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       230 l~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~-------------~-~~-~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +++|+++++.|+  .+|+||+|+||+|+|++ ..             . .. .+|++.++..+.++.......+|..+..
T Consensus       201 ~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~~~~~~~~~~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~v  279 (288)
T 2x9g_A          201 LVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMGEEEKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKV  279 (288)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSCHHHHHHHHHTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccChHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEE
Confidence            999999999998  48999999999999998 21             0 12 4677777777666654444445554433

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-37  Score=276.71  Aligned_cols=194  Identities=30%  Similarity=0.368  Sum_probs=162.2

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+++|++|||||+||||++++++|+++|++|++++|+.+++++..+++........++.++++|+++.++++++++.+
T Consensus         1 m~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (278)
T 1spx_A            1 MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT   80 (278)
T ss_dssp             -CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHH
Confidence            77889999999999999999999999999999999999988888877777432222234889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhh----hHHHHHhhhhhhceeHHHHHHHHhhhhc
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQ----TYELAVECLKTNYYGTKQTCEALIPLLE  156 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~N~~~~~~l~~~~~~~~~  156 (298)
                      .+++|++|+||||||.....+                       +.+.    +.+.|++.+++|+.|+++++++++|.|+
T Consensus        81 ~~~~g~id~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~  137 (278)
T 1spx_A           81 LGKFGKLDILVNNAGAAIPDS-----------------------QSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLS  137 (278)
T ss_dssp             HHHHSCCCEEEECCC------------------------------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCcc-----------------------cccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence            999999999999999764321                       1123    7788999999999999999999999998


Q ss_pred             cCCCCcEEEEccCcc-cccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHH
Q 022357          157 LSDSPRLVNLSSYVS-ALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTR  235 (298)
Q Consensus       157 ~~~~g~iv~vsS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~  235 (298)
                      +++ |+||++||..+ ..+.                                          +....|++||+|++.|++
T Consensus       138 ~~~-g~iv~isS~~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~  174 (278)
T 1spx_A          138 STK-GEIVNISSIASGLHAT------------------------------------------PDFPYYSIAKAAIDQYTR  174 (278)
T ss_dssp             HHT-CEEEEECCTTSSSSCC------------------------------------------TTSHHHHHHHHHHHHHHH
T ss_pred             hcC-CeEEEEecccccccCC------------------------------------------CCccHHHHHHHHHHHHHH
Confidence            655 99999999876 5432                                          567889999999999999


Q ss_pred             HHHHhC--CCcEEEEeeCCeeecCCCC
Q 022357          236 ILAKRY--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       236 ~la~e~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      +++.|+  .||+||+|+||+|.|++..
T Consensus       175 ~la~e~~~~gi~v~~v~Pg~v~t~~~~  201 (278)
T 1spx_A          175 NTAIDLIQHGIRVNSISPGLVATGFGS  201 (278)
T ss_dssp             HHHHHHGGGTCEEEEEEECCBCCCC--
T ss_pred             HHHHHHHhcCcEEEEEecCcccCcccc
Confidence            999998  4899999999999999753

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.5e-36  Score=270.64  Aligned_cols=222  Identities=27%  Similarity=0.281  Sum_probs=182.3

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +.+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+    .+.++++|+++.++++++++++.
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~Dv~d~~~v~~~~~~~~  100 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG----DCQAIPADLSSEAGARRLAQALG  100 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS----CEEECCCCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----ceEEEEeeCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999888877777775433    38889999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC-
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS-  160 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-  160 (298)
                      +.++++|+||||||.....+                       +.+.+.++|++.+++|+.++++++++++|.|++++. 
T Consensus       101 ~~~g~iD~lvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~  157 (276)
T 2b4q_A          101 ELSARLDILVNNAGTSWGAA-----------------------LESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASA  157 (276)
T ss_dssp             HHCSCCSEEEECCCCCCCCC-----------------------TTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCS
T ss_pred             HhcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCC
Confidence            99999999999999865422                       123577889999999999999999999999986655 


Q ss_pred             ---CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCc-hhhhHHHHHHHHHHH
Q 022357          161 ---PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSS-AYKVSKAVINAYTRI  236 (298)
Q Consensus       161 ---g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~al~~l~~~  236 (298)
                         |+||++||..+..+.                                          +... .|++||+|++.|+++
T Consensus       158 ~~~g~iV~isS~~~~~~~------------------------------------------~~~~~~Y~asK~a~~~~~~~  195 (276)
T 2b4q_A          158 ENPARVINIGSVAGISAM------------------------------------------GEQAYAYGPSKAALHQLSRM  195 (276)
T ss_dssp             SSCEEEEEECCGGGTCCC------------------------------------------CCSCTTHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCHHHcCCC------------------------------------------CCCccccHHHHHHHHHHHHH
Confidence               899999998776442                                          4456 899999999999999


Q ss_pred             HHHhC--CCcEEEEeeCCeeecCCCCC--------------C---CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          237 LAKRY--PKFCVNCVCPGFVKTDINFH--------------A---GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       237 la~e~--~~i~vn~v~PG~v~t~~~~~--------------~---~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      ++.|+  .+|+||+|+||+|+|++...              .   .+.+|++.++..+.++..+....+|..+..
T Consensus       196 la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~v  270 (276)
T 2b4q_A          196 LAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPI  270 (276)
T ss_dssp             HHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEe
Confidence            99998  48999999999999997532              1   123667777777766654444445555443

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-36  Score=267.90  Aligned_cols=223  Identities=27%  Similarity=0.285  Sum_probs=186.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..++|++|||||++|||+++|++|+++|++|++++ |+..+.....+++...+..   +.++++|+++.++++++++.+.
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~~   86 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFD---FYASEGNVGDWDSTKQAFDKVK   86 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCC---CEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCe---eEEEecCCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999988 6666777777777766543   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ++++++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++.|
T Consensus        87 ~~~g~id~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g  143 (256)
T 3ezl_A           87 AEVGEIDVLVNNAGITRDVV-----------------------FRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWG  143 (256)
T ss_dssp             HHTCCEEEEEECCCCCCCCC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred             HhcCCCCEEEECCCCCCCCc-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999875432                       2235788999999999999999999999999888789


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          ++...|++||+|+++|+++++.|+
T Consensus       144 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~  181 (256)
T 3ezl_A          144 RIINISSVNGQKGQ------------------------------------------FGQTNYSTAKAGIHGFTMSLAQEV  181 (256)
T ss_dssp             EEEEECCCCGGGSC------------------------------------------SCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcchhhccCC------------------------------------------CCCcccHHHHHHHHHHHHHHHHHH
Confidence            99999998887554                                          667899999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                        .+|+||+|+||+|+|++....               ...+|++.++..+.++.......+|..+..+
T Consensus       182 ~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vd  250 (256)
T 3ezl_A          182 ATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLN  250 (256)
T ss_dssp             GGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEEC
Confidence              589999999999999876432               1347788888877777654455566655543

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-36  Score=271.14  Aligned_cols=198  Identities=29%  Similarity=0.350  Sum_probs=168.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.....+.++++|+++.++++++++++
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (280)
T 1xkq_A            1 MPRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST   80 (280)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence            77889999999999999999999999999999999999998888888887765432124889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .++++++|+||||||.....+..                   ..+.+.+.+.|++.+++|+.++++++++++|.|++++ 
T Consensus        81 ~~~~g~iD~lv~nAg~~~~~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-  140 (280)
T 1xkq_A           81 LKQFGKIDVLVNNAGAAIPDAFG-------------------TTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-  140 (280)
T ss_dssp             HHHHSCCCEEEECCCCCCCCTTC-------------------CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             HHhcCCCCEEEECCCCCCCCCCC-------------------cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-
Confidence            99999999999999986432100                   0123457889999999999999999999999997665 


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                         .+....|++||+|+++|+++++.|
T Consensus       141 g~iv~isS~~~~~~~-----------------------------------------~~~~~~Y~asK~a~~~~~~~la~e  179 (280)
T 1xkq_A          141 GEIVNVSSIVAGPQA-----------------------------------------QPDFLYYAIAKAALDQYTRSTAID  179 (280)
T ss_dssp             CEEEEECCGGGSSSC-----------------------------------------CCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEecCccccCCC-----------------------------------------CCcccHHHHHHHHHHHHHHHHHHH
Confidence            999999998765321                                         145688999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~  259 (298)
                      +  .+|+||+|+||+|+|++.
T Consensus       180 ~~~~gi~v~~v~PG~v~t~~~  200 (280)
T 1xkq_A          180 LAKFGIRVNSVSPGMVETGFT  200 (280)
T ss_dssp             HHTTTCEEEEEEECCBCSSHH
T ss_pred             hccCCeEEEEEeeCcCcCCcc
Confidence            8  589999999999999874

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=1.4e-37  Score=283.16  Aligned_cols=221  Identities=22%  Similarity=0.268  Sum_probs=183.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC----------chhhHHHHHHHHhcCCCCcceeEEEeccCcH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD----------EKRGLEAVEKLKASGVDPELLLFHQLDISDL   70 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~----------~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~   70 (298)
                      |..+.+|++|||||++|||+++|++|+++|++|++++|+          .+.+++..+++...+..   +.++++|+++.
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~d~   98 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGE---AVADGSNVADW   98 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCE---EEEECCCTTSH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCc---EEEEECCCCCH
Confidence            667889999999999999999999999999999999998          56777888888776543   88999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHH
Q 022357           71 ASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEA  150 (298)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~  150 (298)
                      ++++++++.+.+++|++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~~~~~  155 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVRDRM-----------------------IANTSEEEFDAVIAVHLKGHFATMRH  155 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCCCC-----------------------GGGCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHhhHHHHHHHHH
Confidence            9999999999999999999999999875432                       23468899999999999999999999


Q ss_pred             HhhhhccCC------CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhh
Q 022357          151 LIPLLELSD------SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYK  224 (298)
Q Consensus       151 ~~~~~~~~~------~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  224 (298)
                      ++|+|++.+      .|+||++||..+..+.                                          ++...|+
T Consensus       156 ~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~------------------------------------------~~~~~Y~  193 (322)
T 3qlj_A          156 AAAYWRGLSKAGKAVDGRIINTSSGAGLQGS------------------------------------------VGQGNYS  193 (322)
T ss_dssp             HHHHHHHHHHTTCCCCEEEEEECCHHHHHCB------------------------------------------TTCHHHH
T ss_pred             HHHHHHHccccCCCCCcEEEEEcCHHHccCC------------------------------------------CCCccHH
Confidence            999997432      3799999998776543                                          6678999


Q ss_pred             hHHHHHHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCCC------------CCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          225 VSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHA------------GILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       225 ~sK~al~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~~------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      +||+|+++|+++++.|+  .||+||+|+|| +.|++....            ...+|++.+...+.++.......+|..+
T Consensus       194 asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i  272 (322)
T 3qlj_A          194 AAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVF  272 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------CCTTCGGGTHHHHHHHTSGGGGGCCSCEE
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhhccccccCCCCHHHHHHHHHHHhCccccCCCCCEE
Confidence            99999999999999998  58999999999 999876432            1246777777766666543333344444

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-36  Score=273.19  Aligned_cols=196  Identities=29%  Similarity=0.350  Sum_probs=167.8

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.....+.++++|+++.++++++++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            56688999999999999999999999999999999999998888888888765432224889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .++++++|+||||||+....+.                     .+.+.+.+.|++.+++|+.|+++++++++|.|++++ 
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~---------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-  158 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGANLADGT---------------------ANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-  158 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCSC---------------------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-
T ss_pred             HHhcCCCCEEEECCCcCcCCCC---------------------ccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-
Confidence            9999999999999997643210                     023467899999999999999999999999998766 


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                         .++...|++||+|++.|+++++.|
T Consensus       159 g~IV~isS~~~~~~~-----------------------------------------~~~~~~Y~asKaa~~~l~~~la~e  197 (297)
T 1xhl_A          159 GEIVNVSSIVAGPQA-----------------------------------------HSGYPYYACAKAALDQYTRCTAID  197 (297)
T ss_dssp             CEEEEECCGGGSSSC-----------------------------------------CTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEcCchhccCC-----------------------------------------CCCcchHHHHHHHHHHHHHHHHHH
Confidence            999999998765321                                         145688999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~  259 (298)
                      +  .||+||+|+||+|+|++.
T Consensus       198 l~~~gI~v~~v~PG~v~T~~~  218 (297)
T 1xhl_A          198 LIQHGVRVNSVSPGAVATGFM  218 (297)
T ss_dssp             HGGGTCEEEEEEECCBCSSHH
T ss_pred             hcccCeEEEEEeeCCCcCccc
Confidence            8  589999999999999874

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-36  Score=270.56  Aligned_cols=199  Identities=24%  Similarity=0.330  Sum_probs=164.4

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC------------chhhHHHHHHHHhcCCCCcceeEEEeccC
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD------------EKRGLEAVEKLKASGVDPELLLFHQLDIS   68 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~Dls   68 (298)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+            .+.++....++...+..   +.++++|++
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~D~~   81 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRK---AYTAEVDVR   81 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSC---EEEEECCTT
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCc---eEEEEccCC
Confidence            778899999999999999999999999999999999997            55666666666665443   899999999


Q ss_pred             cHHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHH
Q 022357           69 DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC  148 (298)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  148 (298)
                      +.++++++++++.++++++|+||||||+....  .                       ..+.+.|++.+++|+.|+++++
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~-----------------------~~~~~~~~~~~~~N~~g~~~l~  136 (287)
T 3pxx_A           82 DRAAVSRELANAVAEFGKLDVVVANAGICPLG--A-----------------------HLPVQAFADAFDVDFVGVINTV  136 (287)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--T-----------------------TCCTHHHHHHHHHHTHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCccc--C-----------------------cCCHHHHHHHhhhhhhhhHHHH
Confidence            99999999999999999999999999986432  0                       1367889999999999999999


Q ss_pred             HHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHH
Q 022357          149 EALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKA  228 (298)
Q Consensus       149 ~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  228 (298)
                      ++++|+|+  +.|+||++||..+..+....                               ...+....+....|++||+
T Consensus       137 ~~~~~~~~--~~g~iv~isS~~~~~~~~~~-------------------------------~~~~~~~~~~~~~Y~asK~  183 (287)
T 3pxx_A          137 HAALPYLT--SGASIITTGSVAGLIAAAQP-------------------------------PGAGGPQGPGGAGYSYAKQ  183 (287)
T ss_dssp             HHHGGGCC--TTCEEEEECCHHHHHHHHCC-------------------------------C-----CHHHHHHHHHHHH
T ss_pred             HHHHHHhh--cCcEEEEeccchhccccccc-------------------------------ccccccCCCccchHHHHHH
Confidence            99999993  45899999998775431000                               0000011134578999999


Q ss_pred             HHHHHHHHHHHhC--CCcEEEEeeCCeeecCCCC
Q 022357          229 VINAYTRILAKRY--PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       229 al~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~  260 (298)
                      |+++|+++++.|+  .+|+||+|+||+|+|++..
T Consensus       184 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~  217 (287)
T 3pxx_A          184 LVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLN  217 (287)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTS
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEecCcccccccc
Confidence            9999999999999  4899999999999999864

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=2.7e-36  Score=266.05  Aligned_cols=225  Identities=20%  Similarity=0.163  Sum_probs=184.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHH---CCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLAS---KGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~---~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      .+.+|++|||||++|||++++++|++   +|++|++++|+.+++++..+++..... ..++.++++|+++.++++++++.
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP-DLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT-TSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCC-CCeEEEEecCCCCHHHHHHHHHH
Confidence            46789999999999999999999999   899999999999888888888875421 12388999999999999999999


Q ss_pred             HHH--hcCCcc--EEEEccccCCcccccccccccccccccCccccchhhhhh-hhHHHHHhhhhhhceeHHHHHHHHhhh
Q 022357           80 IKT--QFGKLD--ILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCY-QTYELAVECLKTNYYGTKQTCEALIPL  154 (298)
Q Consensus        80 ~~~--~~g~id--~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~  154 (298)
                      +.+  .+|++|  +||||||+.....                     .++.+ .+.+.|++.+++|+.|+++++++++|.
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~---------------------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  140 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVS---------------------KGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNA  140 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCS---------------------SCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             HHhccccccCCccEEEECCcccCCCC---------------------cchhccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            988  678899  9999999753210                     01223 467889999999999999999999999


Q ss_pred             hccC--CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHH
Q 022357          155 LELS--DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINA  232 (298)
Q Consensus       155 ~~~~--~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~  232 (298)
                      |+++  +.|+||++||..+..+.                                          ++...|++||+|+++
T Consensus       141 ~~~~~~~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~  178 (259)
T 1oaa_A          141 FQDSPGLSKTVVNISSLCALQPY------------------------------------------KGWGLYCAGKAARDM  178 (259)
T ss_dssp             SCCCTTCEEEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHH
T ss_pred             HhhccCCCceEEEEcCchhcCCC------------------------------------------CCccHHHHHHHHHHH
Confidence            9876  56899999998876543                                          667899999999999


Q ss_pred             HHHHHHHhCCCcEEEEeeCCeeecCCCCC--------------------CCCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          233 YTRILAKRYPKFCVNCVCPGFVKTDINFH--------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       233 l~~~la~e~~~i~vn~v~PG~v~t~~~~~--------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      |+++++.|+.+|+||+|+||+|+|++...                    ....+|++.++..+.++.. ....+|..+..
T Consensus       179 ~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~-~~~itG~~i~v  257 (259)
T 1oaa_A          179 LYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHH-CCSCTTEEEET
T ss_pred             HHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHhh-ccccCCcEEec
Confidence            99999999977999999999999987431                    1245778888877777753 33445655543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.8e-38  Score=281.69  Aligned_cols=214  Identities=26%  Similarity=0.270  Sum_probs=175.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+|++|||||++|||+++|++|+++|++|++++|+.+....              ...+++|+++.++++++++.+
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~--------------~~~~~~Dv~~~~~~~~~~~~~   88 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA--------------DLHLPGDLREAAYADGLPGAV   88 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC--------------SEECCCCTTSHHHHHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh--------------hhccCcCCCCHHHHHHHHHHH
Confidence            567889999999999999999999999999999999998654211              244589999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||+....+                       +.+.+.+.|++.+++|+.|+++++++++|.|++++.
T Consensus        89 ~~~~g~iD~lvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~  145 (266)
T 3uxy_A           89 AAGLGRLDIVVNNAGVISRGR-----------------------ITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGG  145 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCBC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             HHhcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999875432                       234688999999999999999999999999998778


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|+++|+++++.|
T Consensus       146 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~e  183 (266)
T 3uxy_A          146 GAIVNVASCWGLRPG------------------------------------------PGHALYCLTKAALASLTQCMGMD  183 (266)
T ss_dssp             EEEEEECCSBTTBCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEECCHHhCCCC------------------------------------------CCChHHHHHHHHHHHHHHHHHHH
Confidence            999999998887543                                          66789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCC----------------------CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFH----------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~----------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +  .||+||+|+||+|+|++...                      ....+|++.++..+.++.......+|..+..+
T Consensus       184 ~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd  260 (266)
T 3uxy_A          184 HAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVN  260 (266)
T ss_dssp             HGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEEC
Confidence            9  48999999999999986421                      01236777777777766655445555555443

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1.5e-37  Score=273.68  Aligned_cols=220  Identities=25%  Similarity=0.330  Sum_probs=182.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++   +   ..+.++++|+++.++++++++++.+
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~~~~~~~~~~~~~~~   75 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---G---DAARYQHLDVTIEEDWQRVVAYARE   75 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---G---GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C---CceeEEEecCCCHHHHHHHHHHHHH
Confidence            567899999999999999999999999999999999987776665554   1   1388899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      +++++|+||||||.....+                       +.+.+.+.|++.+++|+.+++++++.++|.|++++.|+
T Consensus        76 ~~g~iD~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~  132 (254)
T 1hdc_A           76 EFGSVDGLVNNAGISTGMF-----------------------LETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGS  132 (254)
T ss_dssp             HHSCCCEEEECCCCCCCSC-----------------------GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             HcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCE
Confidence            9999999999999764321                       22357889999999999999999999999998777799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|++.|+++++.|+ 
T Consensus       133 iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~  170 (254)
T 1hdc_A          133 IVNISSAAGLMGL------------------------------------------ALTSSYGASKWGVRGLSKLAAVELG  170 (254)
T ss_dssp             EEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEECchhhccCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhh
Confidence            9999998876443                                          567899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCC------------C---CCC-ChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFH------------A---GIL-SVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~------------~---~~~-~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                       .+|+||+|+||+|+|++...            .   ... +|++.++..+.++.......+|..+..+
T Consensus       171 ~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vd  239 (254)
T 1hdc_A          171 TDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVD  239 (254)
T ss_dssp             GGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hcCeEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEEC
Confidence             58999999999999986321            0   123 7888888888877654444555555443

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3.2e-36  Score=266.09  Aligned_cols=218  Identities=24%  Similarity=0.283  Sum_probs=181.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||++|||++++++|+++|++|++++|+.+++++..+++..      .+.++++|+++.++++++++.+.+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~   77 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD------AARYVHLDVTQPAQWKAAVDTAVT   77 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG------GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc------CceEEEecCCCHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999998877766665532      278899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||.....+                       +.+.+.+.|++.+++|+.|+++++++++|.|++++.|+
T Consensus        78 ~~g~iD~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~  134 (260)
T 1nff_A           78 AFGGLHVLVNNAGILNIGT-----------------------IEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGS  134 (260)
T ss_dssp             HHSCCCEEEECCCCCCCBC-----------------------TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             HcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCE
Confidence            9999999999999864321                       22357788999999999999999999999998777799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|++.|+++++.|+ 
T Consensus       135 iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~  172 (260)
T 1nff_A          135 IINISSIEGLAGT------------------------------------------VACHGYTATKFAVRGLTKSTALELG  172 (260)
T ss_dssp             EEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEEeehhhcCCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhC
Confidence            9999998876443                                          557899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCC----------CCCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          242 -PKFCVNCVCPGFVKTDINFH----------AGILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~----------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                       .+|+||+|+||+|.|++...          ....+|++.++..+.++.......+|..+.
T Consensus       173 ~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~  233 (260)
T 1nff_A          173 PSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFV  233 (260)
T ss_dssp             GGTEEEEEEEECCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             ccCcEEEEEEeCCCCCCccccchhhHHhCccCCCCCHHHHHHHHHHHhCccccCCcCCEEE
Confidence             58999999999999987531          113478888888887776544434454443

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=7e-36  Score=266.65  Aligned_cols=226  Identities=18%  Similarity=0.102  Sum_probs=184.5

Q ss_pred             CCcCCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         1 m~~~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      |+.+++|++|||||+  +|||+++|++|+++|++|++++|+.  ..+.++++......   +.++++|+++.++++++++
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~---~~~~~~Dl~~~~~v~~~~~   95 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNP---AAVLPCDVISDQEIKDLFV   95 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCC---SEEEECCTTCHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCC---ceEEEeecCCHHHHHHHHH
Confidence            778899999999988  7799999999999999999999987  45566666554443   7899999999999999999


Q ss_pred             HHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhh-hhHHHHHhhhhhhceeHHHHHHHHhhhhcc
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCY-QTYELAVECLKTNYYGTKQTCEALIPLLEL  157 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  157 (298)
                      ++.+.++++|+||||||+.......                   .++.+ .+.+.+++.+++|+.++++++++++|.|++
T Consensus        96 ~~~~~~g~id~li~nAg~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  156 (280)
T 3nrc_A           96 ELGKVWDGLDAIVHSIAFAPRDQLE-------------------GNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKN  156 (280)
T ss_dssp             HHHHHCSSCCEEEECCCCCCGGGSS-------------------SCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred             HHHHHcCCCCEEEECCccCCCcccC-------------------CccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999999999987532110                   12223 678999999999999999999999999986


Q ss_pred             CCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH
Q 022357          158 SDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       158 ~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l  237 (298)
                      + .|+||++||..+..+.                                          +....|++||+|+++|++++
T Consensus       157 ~-~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~~~~~l  193 (280)
T 3nrc_A          157 R-NASMVALTYIGAEKAM------------------------------------------PSYNTMGVAKASLEATVRYT  193 (280)
T ss_dssp             T-TCEEEEEECGGGTSCC------------------------------------------TTTHHHHHHHHHHHHHHHHH
T ss_pred             C-CCeEEEEeccccccCC------------------------------------------CCchhhHHHHHHHHHHHHHH
Confidence            5 6899999998876543                                          66789999999999999999


Q ss_pred             HHhC--CCcEEEEeeCCeeecCCCCCCC-----------------CCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          238 AKRY--PKFCVNCVCPGFVKTDINFHAG-----------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       238 a~e~--~~i~vn~v~PG~v~t~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +.|+  .+|+||+|+||+|+|++.....                 ..+|++.++..+.++.......+|..+..+
T Consensus       194 a~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vd  268 (280)
T 3nrc_A          194 ALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVD  268 (280)
T ss_dssp             HHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEES
T ss_pred             HHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEEC
Confidence            9998  5899999999999999864321                 347777777777776654444555555443

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=9.2e-36  Score=263.55  Aligned_cols=228  Identities=18%  Similarity=0.161  Sum_probs=185.3

Q ss_pred             CC-cCCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHH
Q 022357            1 MA-EATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         1 m~-~~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      |+ ++++|++|||||+  +|||+++|++|+++|++|++++|+....+...+.....+..  ++.++++|+++.+++++++
T Consensus         1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~   78 (266)
T 3oig_A            1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRN--DSIILPCDVTNDAEIETCF   78 (266)
T ss_dssp             CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSC--CCEEEECCCSSSHHHHHHH
T ss_pred             CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCC--CceEEeCCCCCHHHHHHHH
Confidence            44 5789999999999  66999999999999999999999965444444433333321  3899999999999999999


Q ss_pred             HHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc
Q 022357           78 DFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL  157 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  157 (298)
                      +++.++++++|+||||||......                   .+.++.+.+.+.+++.+++|+.++++++++++|+|++
T Consensus        79 ~~~~~~~g~id~li~~Ag~~~~~~-------------------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  139 (266)
T 3oig_A           79 ASIKEQVGVIHGIAHCIAFANKEE-------------------LVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE  139 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCGGG-------------------GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT
T ss_pred             HHHHHHhCCeeEEEEccccccccc-------------------cccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC
Confidence            999999999999999999875311                   1223345688999999999999999999999999963


Q ss_pred             CCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH
Q 022357          158 SDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       158 ~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l  237 (298)
                        .|+||++||..+..+.                                          +....|++||+|+++|++++
T Consensus       140 --~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~l  175 (266)
T 3oig_A          140 --GGSIVTLTYLGGELVM------------------------------------------PNYNVMGVAKASLDASVKYL  175 (266)
T ss_dssp             --CEEEEEEECGGGTSCC------------------------------------------TTTHHHHHHHHHHHHHHHHH
T ss_pred             --CceEEEEecccccccC------------------------------------------CCcchhHHHHHHHHHHHHHH
Confidence              5899999998876543                                          66889999999999999999


Q ss_pred             HHhC--CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          238 AKRY--PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       238 a~e~--~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +.|+  .+|+||+|+||+|+|++....                 ...+|++.++..+.++.......+|..+..+
T Consensus       176 a~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vd  250 (266)
T 3oig_A          176 AADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVD  250 (266)
T ss_dssp             HHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEEC
Confidence            9999  489999999999999876542                 1357888888888887765555566655443

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.6e-37  Score=273.25  Aligned_cols=202  Identities=25%  Similarity=0.250  Sum_probs=171.7

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+|++|||||++|||+++|++|+++|++|++++|+.+....            ..+.++++|+++.++++++++++
T Consensus        23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------------~~~~~~~~Dv~d~~~v~~~~~~~   90 (260)
T 3un1_A           23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD------------PDIHTVAGDISKPETADRIVREG   90 (260)
T ss_dssp             HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS------------TTEEEEESCTTSHHHHHHHHHHH
T ss_pred             hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc------------CceEEEEccCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999998754221            13889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+++|++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|.|++++.
T Consensus        91 ~~~~g~iD~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~  147 (260)
T 3un1_A           91 IERFGRIDSLVNNAGVFLAKP-----------------------FVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGS  147 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHCCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence            999999999999999875432                       223588999999999999999999999999998888


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                        .......|++||+|+++|+++++.|
T Consensus       148 g~iv~isS~~~~~~~----------------------------------------~~~~~~~Y~~sKaa~~~l~~~la~e  187 (260)
T 3un1_A          148 GHIVSITTSLVDQPM----------------------------------------VGMPSALASLTKGGLNAVTRSLAME  187 (260)
T ss_dssp             EEEEEECCTTTTSCB----------------------------------------TTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEechhhccCC----------------------------------------CCCccHHHHHHHHHHHHHHHHHHHH
Confidence            999999997765321                                        1144678999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCC------------CCCChhhhhhhhhhh
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHA------------GILSVEEGAESPVKL  277 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~------------~~~~~~~~a~~~~~~  277 (298)
                      +  .||+||+|+||+|+|++....            ...+|++.++..+.+
T Consensus       188 ~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~p~~r~~~~~dva~av~~L  238 (260)
T 3un1_A          188 FSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLHPVGRMGEIRDVVDAVLYL  238 (260)
T ss_dssp             TTTTTEEEEEEEECCBCCTTSCGGGHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             hCcCCeEEEEEeecCCCCCCCCHHHHHHHhccCCCCCCcCHHHHHHHHHHh
Confidence            9  489999999999999986431            134778888887777

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=8.6e-36  Score=265.31  Aligned_cols=223  Identities=20%  Similarity=0.207  Sum_probs=181.5

Q ss_pred             CCcCCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         1 m~~~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      |.++.+|++|||||+  +|||++++++|+++|++|++++|+.+ ..+..+++....+.   +.++++|+++.++++++++
T Consensus         1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~---~~~~~~D~~~~~~v~~~~~   76 (275)
T 2pd4_A            1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNS---PYVYELDVSKEEHFKSLYN   76 (275)
T ss_dssp             -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTC---CCEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCC---cEEEEcCCCCHHHHHHHHH
Confidence            778899999999999  99999999999999999999999976 55566666543332   6889999999999999999


Q ss_pred             HHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                      .+.+.++++|+||||||+.....                   ...++.+.+.+.|++.+++|+.++++++++++|.|++ 
T Consensus        77 ~~~~~~g~id~lv~nAg~~~~~~-------------------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-  136 (275)
T 2pd4_A           77 SVKKDLGSLDFIVHSVAFAPKEA-------------------LEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN-  136 (275)
T ss_dssp             HHHHHTSCEEEEEECCCCCCGGG-------------------GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-
T ss_pred             HHHHHcCCCCEEEECCccCcccc-------------------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-
Confidence            99999999999999999864310                   0012234678899999999999999999999999974 


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                       .|+||++||..+..+.                                          +....|++||+|+++|+++++
T Consensus       137 -~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la  173 (275)
T 2pd4_A          137 -GASVLTLSYLGSTKYM------------------------------------------AHYNVMGLAKAALESAVRYLA  173 (275)
T ss_dssp             -EEEEEEEECGGGTSBC------------------------------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             -CCEEEEEecchhcCCC------------------------------------------CCchhhHHHHHHHHHHHHHHH
Confidence             4899999998776443                                          567889999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      .++  .+|+||+|+||+|+|++....                 ...+|++.++..+.++.......+|.++
T Consensus       174 ~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~  244 (275)
T 2pd4_A          174 VDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVH  244 (275)
T ss_dssp             HHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccCCCCCEE
Confidence            998  489999999999999975421                 1347888888888777654444455544

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-37  Score=269.97  Aligned_cols=219  Identities=25%  Similarity=0.257  Sum_probs=179.4

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++   +.   .+.++++|+++.++++++++.+.
T Consensus         2 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~D~~~~~~v~~~~~~~~   75 (253)
T 1hxh_A            2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GE---RSMFVRHDVSSEADWTLVMAAVQ   75 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CT---TEEEECCCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CC---ceEEEEccCCCHHHHHHHHHHHH
Confidence            4578899999999999999999999999999999999988777766665   22   38899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +.++++|+||||||.....+                       +.+.+.++|++.+++|+.++++++++++|.|++++ |
T Consensus        76 ~~~g~id~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g  131 (253)
T 1hxh_A           76 RRLGTLNVLVNNAGILLPGD-----------------------METGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-G  131 (253)
T ss_dssp             HHHCSCCEEEECCCCCCCBC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-E
T ss_pred             HHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-C
Confidence            99999999999999864321                       22357889999999999999999999999998776 9


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|++.|+++++.|+
T Consensus       132 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~  169 (253)
T 1hxh_A          132 SIINMASVSSWLPI------------------------------------------EQYAGYSASKAAVSALTRAAALSC  169 (253)
T ss_dssp             EEEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcchhhcCCC------------------------------------------CCCccHHHHHHHHHHHHHHHHHHh
Confidence            99999998876443                                          567899999999999999999998


Q ss_pred             --C--CcEEEEeeCCeeecCCCCC-C----------------C---CCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 --P--KFCVNCVCPGFVKTDINFH-A----------------G---ILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 --~--~i~vn~v~PG~v~t~~~~~-~----------------~---~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                        .  +|+||+|+||+|+|++... .                +   ..+|++.++..+.++..+....+|..+..
T Consensus       170 ~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~v  244 (253)
T 1hxh_A          170 RKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHA  244 (253)
T ss_dssp             HHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccccCCCCcEEEE
Confidence              3  8999999999999986321 0                0   12566666666666654434444544443

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=2.8e-37  Score=271.90  Aligned_cols=186  Identities=27%  Similarity=0.400  Sum_probs=162.3

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++|++|||||++|||++++++|+++|++|++++|+.+  +...+++...+.   .+.++++|+++.++++++++++.++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~   76 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGV---KAVHHPADLSDVAQIEALFALAERE   76 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSC---CEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCC---ceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999876  455566654433   3888999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      +|++|+||||||.....+                       +.+.+.+.|++.+++|+.++++++++++|.|++++.|+|
T Consensus        77 ~g~id~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~i  133 (255)
T 2q2v_A           77 FGGVDILVNNAGIQHVAP-----------------------VEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRI  133 (255)
T ss_dssp             HSSCSEEEECCCCCCCBC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEE
T ss_pred             cCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEE
Confidence            999999999999864321                       223578899999999999999999999999988777999


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+.                                          +....|++||+|+++|+++++.|+  
T Consensus       134 v~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~  171 (255)
T 2q2v_A          134 INIASVHGLVGS------------------------------------------TGKAAYVAAKHGVVGLTKVVGLETAT  171 (255)
T ss_dssp             EEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EEEcCchhccCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhcc
Confidence            999998876443                                          567899999999999999999999  


Q ss_pred             CCcEEEEeeCCeeecCCC
Q 022357          242 PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~  259 (298)
                      .+|+||+|+||+|+|++.
T Consensus       172 ~gi~v~~v~Pg~v~t~~~  189 (255)
T 2q2v_A          172 SNVTCNAICPGWVLTPLV  189 (255)
T ss_dssp             SSEEEEEEEESSBCCHHH
T ss_pred             cCcEEEEEeeCCCcCcch
Confidence            489999999999999863

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=5.2e-37  Score=272.99  Aligned_cols=231  Identities=21%  Similarity=0.185  Sum_probs=175.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhhHHHHHHHHhc-CCCCcceeEEEeccCcH----HHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKAS-GVDPELLLFHQLDISDL----ASVSSL   76 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dls~~----~~v~~~   76 (298)
                      .+++|++|||||++|||++++++|+++|++|++++| +.+++++..+++... +.   ++.++++|+++.    ++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~   84 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG---SAVLCKGDLSLSSSLLDCCEDI   84 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT---CEEEEECCCSSSTTHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCC---ceEEEeccCCCccccHHHHHHH
Confidence            357899999999999999999999999999999999 888888888887654 32   288999999999    999999


Q ss_pred             HHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhc
Q 022357           77 ADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE  156 (298)
Q Consensus        77 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~  156 (298)
                      ++.+.+.++++|+||||||+....+..+.            .+...........+.|++.+++|+.++++++++++|.|+
T Consensus        85 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~  152 (276)
T 1mxh_A           85 IDCSFRAFGRCDVLVNNASAYYPTPLLPG------------DDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG  152 (276)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCSCC-----------------------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCcccc------------CcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh
Confidence            99999999999999999998654321110            000000000122288999999999999999999999997


Q ss_pred             cCCC------CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHH
Q 022357          157 LSDS------PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVI  230 (298)
Q Consensus       157 ~~~~------g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al  230 (298)
                       ++.      |+||++||..+..+.                                          +....|++||+|+
T Consensus       153 -~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~  189 (276)
T 1mxh_A          153 -EGGAWRSRNLSVVNLCDAMTDLPL------------------------------------------PGFCVYTMAKHAL  189 (276)
T ss_dssp             -------CCCEEEEEECCGGGGSCC------------------------------------------TTCHHHHHHHHHH
T ss_pred             -cCCCCCCCCcEEEEECchhhcCCC------------------------------------------CCCeehHHHHHHH
Confidence             554      899999998876543                                          6678999999999


Q ss_pred             HHHHHHHHHhC--CCcEEEEeeCCeeecCCCCC-----------C---C-CCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          231 NAYTRILAKRY--PKFCVNCVCPGFVKTDINFH-----------A---G-ILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       231 ~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~-----------~---~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +.|+++++.|+  .+|+||+|+||+|.|+ ...           .   . ..+|++.++..+.++.......+|..+..
T Consensus       190 ~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~~~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~v  267 (276)
T 1mxh_A          190 GGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKV  267 (276)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEE
Confidence            99999999998  4899999999999998 210           0   1 34677777777776654434444554443

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=6.8e-36  Score=262.31  Aligned_cols=206  Identities=23%  Similarity=0.298  Sum_probs=171.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++.   .   .+.++++|+++.++++++++.+.+.+++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   74 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---D---NLYIAQLDVRNRAAIEEMLASLPAEWCN   74 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---T---TEEEEECCTTCHHHHHHHHHTSCTTTCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---C---ceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999887777666653   1   2889999999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+||||||+....                      .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++
T Consensus        75 iD~lvnnAg~~~~~----------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~i  132 (248)
T 3asu_A           75 IDILVNNAGLALGM----------------------EPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINI  132 (248)
T ss_dssp             CCEEEECCCCCCCC----------------------SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             CCEEEECCCcCCCC----------------------CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence            99999999975311                      11223578899999999999999999999999987777999999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CCc
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKF  244 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~i  244 (298)
                      ||..+..+.                                          ++...|++||+|+++|+++++.|+  .+|
T Consensus       133 sS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi  170 (248)
T 3asu_A          133 GSTAGSWPY------------------------------------------AGGNVYGATKAFVRQFSLNLRTDLHGTAV  170 (248)
T ss_dssp             CCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred             ccchhccCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCc
Confidence            998876443                                          567899999999999999999998  489


Q ss_pred             EEEEeeCCeee-cCCCCC---------------CCCCChhhhhhhhhhhhccCC
Q 022357          245 CVNCVCPGFVK-TDINFH---------------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       245 ~vn~v~PG~v~-t~~~~~---------------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      +||+|+||+|+ |++...               ..+.+|++.++..+.++..+.
T Consensus       171 ~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~~~  224 (248)
T 3asu_A          171 RVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPA  224 (248)
T ss_dssp             EEEEEEECSBCC----------------------CCBCHHHHHHHHHHHHHSCT
T ss_pred             EEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHHHhcCCc
Confidence            99999999999 987531               013578888888888877544

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=2.9e-35  Score=263.17  Aligned_cols=223  Identities=21%  Similarity=0.237  Sum_probs=179.1

Q ss_pred             CcCCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         2 ~~~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      ..+.+|++|||||+  +|||++++++|+++|++|++++|+.+ ..+..+++....+.   +.++++|+++.++++++++.
T Consensus        17 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~---~~~~~~Dl~~~~~v~~~~~~   92 (285)
T 2p91_A           17 GLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGS---DLVVKCDVSLDEDIKNLKKF   92 (285)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTC---CCEEECCTTCHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCC---eEEEEcCCCCHHHHHHHHHH
Confidence            34789999999999  99999999999999999999999975 55566666543322   67899999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+.+|++|+||||||+......                   ..++.+.+.+.|++.+++|+.|+++++++++|.|+++ 
T Consensus        93 ~~~~~g~iD~lv~~Ag~~~~~~~-------------------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-  152 (285)
T 2p91_A           93 LEENWGSLDIIVHSIAYAPKEEF-------------------KGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-  152 (285)
T ss_dssp             HHHHTSCCCEEEECCCCCCGGGG-------------------SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-
T ss_pred             HHHHcCCCCEEEECCCCCCcccC-------------------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-
Confidence            99999999999999998643100                   0122345788999999999999999999999999754 


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          +....|++||+|+++|+++++.
T Consensus       153 ~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~  190 (285)
T 2p91_A          153 NGAIVTLSYYGAEKVV------------------------------------------PHYNVMGIAKAALESTVRYLAY  190 (285)
T ss_dssp             CCEEEEEECGGGTSBC------------------------------------------TTTTHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEccchhccCC------------------------------------------CCccHHHHHHHHHHHHHHHHHH
Confidence            5899999998776443                                          5678899999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      ++  .+|+||+|+||+|+|++....                 ...+|++.++..+.++.......+|..+
T Consensus       191 e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~tG~~~  260 (285)
T 2p91_A          191 DIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAITGEVV  260 (285)
T ss_dssp             HHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCCCCEE
Confidence            98  589999999999999975321                 1347788888877777543333444444

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-36  Score=268.43  Aligned_cols=218  Identities=24%  Similarity=0.225  Sum_probs=177.9

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.      ..+.++++|+++.++++++++.+
T Consensus         1 m~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~   74 (263)
T 2a4k_A            1 MGRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE------AEAIAVVADVSDPKAVEAVFAEA   74 (263)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC------SSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------CceEEEEcCCCCHHHHHHHHHHH
Confidence            778899999999999999999999999999999999999877666555442      13889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||+....+                       +.+.+.+.|++.+++|+.++++++++++|.| ++ .
T Consensus        75 ~~~~g~iD~lvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~  129 (263)
T 2a4k_A           75 LEEFGRLHGVAHFAGVAHSAL-----------------------SWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-G  129 (263)
T ss_dssp             HHHHSCCCEEEEGGGGTTTTC---------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-T
T ss_pred             HHHcCCCcEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-C
Confidence            999999999999999864321                       2235788999999999999999999999999 44 6


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+. +.                                          +....|++||+|+++|+++++.|
T Consensus       130 g~iv~isS~~~~-~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e  166 (263)
T 2a4k_A          130 GSLVLTGSVAGL-GA------------------------------------------FGLAHYAAGKLGVVGLARTLALE  166 (263)
T ss_dssp             CEEEEECCCTTC-CH------------------------------------------HHHHHHHHCSSHHHHHHHHHHHH
T ss_pred             CEEEEEecchhc-CC------------------------------------------CCcHHHHHHHHHHHHHHHHHHHH
Confidence            899999998876 32                                          33578999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +  .||+||+|+||+|+|++....               ...+|++.++..+.++.......+|..+..
T Consensus       167 ~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~v  235 (263)
T 2a4k_A          167 LARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYV  235 (263)
T ss_dssp             HTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEE
Confidence            8  489999999999999975431               134677777777777665444445555443

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=3.6e-36  Score=268.20  Aligned_cols=219  Identities=23%  Similarity=0.216  Sum_probs=184.5

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++|++|||||+||||+++|++|+++|++|++++|+.+++.+..+++   +.   .+.++++|+++.++++++++.+.++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PD---RAEAISLDVTDGERIDVVAADVLAR   76 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TT---TEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cC---CceEEEeeCCCHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999988877765543   22   3889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      ++++|+||||||.....+                       +.+.+.++|++.+++|+.|++++++.++|.|++++.|+|
T Consensus        77 ~g~id~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~i  133 (281)
T 3m1a_A           77 YGRVDVLVNNAGRTQVGA-----------------------FEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSV  133 (281)
T ss_dssp             HSCCSEEEECCCCEEECC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             CCCCCEEEECCCcCCCCC-----------------------hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence            999999999999864432                       223578899999999999999999999999988778999


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+.                                          +....|++||+|+++|+++++.++  
T Consensus       134 v~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~  171 (281)
T 3m1a_A          134 VNISSFGGQLSF------------------------------------------AGFSAYSATKAALEQLSEGLADEVAP  171 (281)
T ss_dssp             EEECCGGGTCCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             EEEcCccccCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhhc
Confidence            999998876543                                          667899999999999999999998  


Q ss_pred             CCcEEEEeeCCeeecCCCCCC----------------------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 PKFCVNCVCPGFVKTDINFHA----------------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~----------------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      .+|+||+|+||+|+|++....                            .+.++++.++..+.++..+.  ...++++.+
T Consensus       172 ~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~--~~~~~~l~s  249 (281)
T 3m1a_A          172 FGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTEK--TPLRLALGG  249 (281)
T ss_dssp             GTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSSS--CCSEEEESH
T ss_pred             cCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCCC--CCeEEecCc
Confidence            489999999999999974321                            13578888888888776543  456777766


Q ss_pred             cc
Q 022357          294 EE  295 (298)
Q Consensus       294 ~~  295 (298)
                      +.
T Consensus       250 ~~  251 (281)
T 3m1a_A          250 DA  251 (281)
T ss_dssp             HH
T ss_pred             hH
Confidence            54

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=1.1e-36  Score=267.37  Aligned_cols=223  Identities=28%  Similarity=0.357  Sum_probs=183.2

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      ++++++|++|||||++|||++++++|+++|++|+++ .|+.+.+++..+++...+..   +.++++|+++.++++++++.
T Consensus         2 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~   78 (255)
T 3icc_A            2 NSMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGS---AFSIGANLESLHGVEALYSS   78 (255)
T ss_dssp             CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCE---EEEEECCTTSHHHHHHHHHH
T ss_pred             CCccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCc---eEEEecCcCCHHHHHHHHHH
Confidence            467889999999999999999999999999999886 66777788888888776543   88999999999999999999


Q ss_pred             HHHhcC------CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhh
Q 022357           80 IKTQFG------KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP  153 (298)
Q Consensus        80 ~~~~~g------~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  153 (298)
                      +.+.++      ++|+||||||+.....                       +.+.+.+.|++.+++|+.++++++++++|
T Consensus        79 ~~~~~~~~~~~~~id~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  135 (255)
T 3icc_A           79 LDNELQNRTGSTKFDILINNAGIGPGAF-----------------------IEETTEQFFDRMVSVNAKAPFFIIQQALS  135 (255)
T ss_dssp             HHHHHHHHHSSSCEEEEEECCCCCCCBC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHTT
T ss_pred             HHHHhcccccCCcccEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHhhhchHHHHHHHHHHH
Confidence            887764      4999999999864331                       22357889999999999999999999999


Q ss_pred             hhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHH
Q 022357          154 LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAY  233 (298)
Q Consensus       154 ~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l  233 (298)
                      .|+  +.|+||++||..+..+.                                          +....|++||+|+++|
T Consensus       136 ~~~--~~~~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~  171 (255)
T 3icc_A          136 RLR--DNSRIINISSAATRISL------------------------------------------PDFIAYSMTKGAINTM  171 (255)
T ss_dssp             TEE--EEEEEEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHH
T ss_pred             hhC--CCCEEEEeCChhhccCC------------------------------------------CCcchhHHhHHHHHHH
Confidence            995  34799999998876543                                          6678999999999999


Q ss_pred             HHHHHHhC--CCcEEEEeeCCeeecCCCCCCC-----------------CCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          234 TRILAKRY--PKFCVNCVCPGFVKTDINFHAG-----------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       234 ~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~-----------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +++++.|+  .+|+||+|+||+|+|++.....                 ..+|++.++..+.++.......+|..+..+
T Consensus       172 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vd  250 (255)
T 3icc_A          172 TFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVS  250 (255)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEec
Confidence            99999998  5899999999999999875421                 236777777777666554455556655544

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=2e-36  Score=267.17  Aligned_cols=196  Identities=21%  Similarity=0.160  Sum_probs=163.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++.+|++|||||++|||++++++|+++|++|++++|+.+++++..++++..+.   ++.++++|+++.++++++++.+.+
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGG---QCVPVVCDSSQESEVRSLFEQVDR   78 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSS---EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC---ceEEEECCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998888888888776543   388999999999999999999988


Q ss_pred             h-cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           83 Q-FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        83 ~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      . +|++|+||||||.......                +....++.+.+.+.|++.+++|+.+++++++.++|.|++++.|
T Consensus        79 ~~~g~id~lvnnAg~g~~~~~----------------~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g  142 (260)
T 2qq5_A           79 EQQGRLDVLVNNAYAGVQTIL----------------NTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQG  142 (260)
T ss_dssp             HHTTCCCEEEECCCTTHHHHH----------------HTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCC
T ss_pred             hcCCCceEEEECCcccccccc----------------ccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCc
Confidence            6 8999999999953211000                0000122235678889999999999999999999999877779


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+                                           .....|++||+|+++|+++++.|+
T Consensus       143 ~iv~isS~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~  179 (260)
T 2qq5_A          143 LIVVISSPGSLQY-------------------------------------------MFNVPYGVGKAACDKLAADCAHEL  179 (260)
T ss_dssp             EEEEECCGGGTSC-------------------------------------------CSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcChhhcCC-------------------------------------------CCCCchHHHHHHHHHHHHHHHHHh
Confidence            9999999876532                                           235789999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~  260 (298)
                        .+|+||+|+||+|+|++..
T Consensus       180 ~~~gi~v~~v~PG~v~T~~~~  200 (260)
T 2qq5_A          180 RRHGVSCVSLWPGIVQTELLK  200 (260)
T ss_dssp             GGGTCEEEEEECCCSCTTTC-
T ss_pred             ccCCeEEEEEecCccccHHHH
Confidence              4899999999999999854

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-35  Score=259.62  Aligned_cols=225  Identities=20%  Similarity=0.172  Sum_probs=179.7

Q ss_pred             CcCCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         2 ~~~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      ..+++|++|||||+  +|||+++|++|+++|++|++++|+.. ..+.++++....+.   +.++++|+++.++++++++.
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~   85 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGS---ELVFPCDVADDAQIDALFAS   85 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTC---CCEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh-hHHHHHHHHHHcCC---cEEEECCCCCHHHHHHHHHH
Confidence            34678999999999  99999999999999999999999954 34445555444333   78899999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhh-hhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCY-QTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                      +.++++++|+||||||+.......                   .++.+ .+.+.+++.+++|+.++++++++++|.|++ 
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-  145 (271)
T 3ek2_A           86 LKTHWDSLDGLVHSIGFAPREAIA-------------------GDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD-  145 (271)
T ss_dssp             HHHHCSCEEEEEECCCCCCGGGGS-------------------SCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE-
T ss_pred             HHHHcCCCCEEEECCccCcccccc-------------------CccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc-
Confidence            999999999999999987542110                   11122 578899999999999999999999999974 


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                       .|+||++||..+..+.                                          +....|++||+|+++|+++++
T Consensus       146 -~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la  182 (271)
T 3ek2_A          146 -DASLLTLSYLGAERAI------------------------------------------PNYNTMGLAKAALEASVRYLA  182 (271)
T ss_dssp             -EEEEEEEECGGGTSBC------------------------------------------TTTTHHHHHHHHHHHHHHHHH
T ss_pred             -CceEEEEeccccccCC------------------------------------------CCccchhHHHHHHHHHHHHHH
Confidence             5899999998876543                                          667899999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      .|+  .+|+||+|+||+|+|++....                 ...+|++.++..+.++.......+|..+..+
T Consensus       183 ~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vd  256 (271)
T 3ek2_A          183 VSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVD  256 (271)
T ss_dssp             HHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEES
T ss_pred             HHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEEC
Confidence            998  589999999999999986432                 2458888888888888765555666665543

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=2.7e-35  Score=260.66  Aligned_cols=222  Identities=18%  Similarity=0.163  Sum_probs=178.5

Q ss_pred             cCCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .+.+|++|||||+  +|||++++++|+++|++|++++|+. +..+..+++....+.   ..++++|+++.++++++++++
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~---~~~~~~D~~~~~~v~~~~~~~   81 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGS---DIVLQCDVAEDASIDTMFAEL   81 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTC---CCEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCC---cEEEEccCCCHHHHHHHHHHH
Confidence            3789999999999  9999999999999999999999987 555666666544332   478899999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhh-hhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCY-QTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      .++++++|+||||||+.....                   ...++.+ .+.+.|++.+++|+.++++++++++|.|++  
T Consensus        82 ~~~~g~iD~lv~~Ag~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--  140 (265)
T 1qsg_A           82 GKVWPKFDGFVHSIGFAPGDQ-------------------LDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--  140 (265)
T ss_dssp             HTTCSSEEEEEECCCCCCGGG-------------------GSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--
T ss_pred             HHHcCCCCEEEECCCCCCccc-------------------cCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--
Confidence            999999999999999764210                   0012334 578899999999999999999999999974  


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          +....|++||+|++.|+++++.
T Consensus       141 ~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~  178 (265)
T 1qsg_A          141 GSALLTLSYLGAERAI------------------------------------------PNYNVMGLAKASLEANVRYMAN  178 (265)
T ss_dssp             EEEEEEEECGGGTSBC------------------------------------------TTTTHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEcchhhccCC------------------------------------------CCchHHHHHHHHHHHHHHHHHH
Confidence            4899999998776443                                          5578899999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      ++  .+|+||+|+||+|+|++....                 ...+|++.++..+.++.......+|..+.
T Consensus       179 e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~  249 (265)
T 1qsg_A          179 AMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVH  249 (265)
T ss_dssp             HHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEE
Confidence            98  489999999999999975321                 13477777777777765444444444443

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-35  Score=261.98  Aligned_cols=226  Identities=21%  Similarity=0.231  Sum_probs=181.0

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHH-HHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVE-KLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +.+|++|||||++|||+++|++|+++|++|++++|+.....+... .+...+   .++.++++|+++.++++++++++.+
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~   81 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVE---ERLQFVQADVTKKEDLHKIVEEAMS   81 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGG---GGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999887665444333 333322   2389999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||+....                     ..++.+.+.+.|++.+++|+.++++++++++|.|++++.|+
T Consensus        82 ~~g~id~lv~~Ag~~~~~---------------------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~  140 (264)
T 3i4f_A           82 HFGKIDFLINNAGPYVFE---------------------RKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGR  140 (264)
T ss_dssp             HHSCCCEEECCCCCCCCS---------------------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             HhCCCCEEEECCcccccC---------------------CCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCe
Confidence            999999999999953221                     01223468889999999999999999999999998888899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||.....                                        ....+....|++||+|+++|+++++.|+ 
T Consensus       141 iv~iss~~~~~----------------------------------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~  180 (264)
T 3i4f_A          141 IINYGFQGADS----------------------------------------APGWIYRSAFAAAKVGLVSLTKTVAYEEA  180 (264)
T ss_dssp             EEEECCTTGGG----------------------------------------CCCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEEeechhcc----------------------------------------cCCCCCCchhHHHHHHHHHHHHHHHHHhh
Confidence            99999973321                                        0112557899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                       .+|+||+|+||+|+|++....               ...+|++.++..+.++.......+|..+..+
T Consensus       181 ~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vd  248 (264)
T 3i4f_A          181 EYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMITGTIIEVT  248 (264)
T ss_dssp             GGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEc
Confidence             589999999999999986432               1347888898888888765555666666554

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=7.7e-36  Score=265.59  Aligned_cols=210  Identities=25%  Similarity=0.290  Sum_probs=173.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+. |++|||||++|||++++++|+++|++|++++|+.+++++..+++...    ..+.++++|+++.++++++++.+.+
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~   93 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK----TRVLPLTLDVRDRAAMSAAVDNLPE   93 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT----SCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC----CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            345 89999999999999999999999999999999988888777777543    1388999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC-
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP-  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-  161 (298)
                      .++++|+||||||+....                      .++.+.+.++|++.+++|+.|+++++++++|.|++++.| 
T Consensus        94 ~~g~iD~lvnnAG~~~~~----------------------~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~  151 (272)
T 2nwq_A           94 EFATLRGLINNAGLALGT----------------------DPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGA  151 (272)
T ss_dssp             GGSSCCEEEECCCCCCCC----------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTC
T ss_pred             HhCCCCEEEECCCCCCCC----------------------CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence            999999999999976421                      122345788999999999999999999999999877678 


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|+++|+++++.|+
T Consensus       152 ~IV~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~l~~~la~el  189 (272)
T 2nwq_A          152 SIVNLGSVAGKWPY------------------------------------------PGSHVYGGTKAFVEQFSLNLRCDL  189 (272)
T ss_dssp             EEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEeCCchhccCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHh
Confidence            99999998876443                                          567899999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLP  281 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~  281 (298)
                        .+|+||+|+||+|+|++....               .+.+|++.++..++++..+
T Consensus       190 ~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~  246 (272)
T 2nwq_A          190 QGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQP  246 (272)
T ss_dssp             TTSCCEEEEEEECSBC--------------------CCCCBCHHHHHHHHHHHHTSC
T ss_pred             CccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHHHHhCCC
Confidence              489999999999999975310               1357888888888877653

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=5e-37  Score=271.34  Aligned_cols=186  Identities=28%  Similarity=0.363  Sum_probs=161.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||+||||++++++|+++|++|++++|+.++++...+++..      .+.++++|+++.++++++++++.+
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~d~~~v~~~~~~~~~   82 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN------GGFAVEVDVTKRASVDAAMQKAID   82 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT------CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc------CCeEEEEeCCCHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999998776665544432      278899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-CC
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SP  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g  161 (298)
                      ++|++|+||||||.....+                       +.+.+.+.|++.+++|+.++++++++++|.|++++ .|
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g  139 (263)
T 3ak4_A           83 ALGGFDLLCANAGVSTMRP-----------------------AVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKG  139 (263)
T ss_dssp             HHTCCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HcCCCCEEEECCCcCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCe
Confidence            9999999999999764321                       22357889999999999999999999999998776 69


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|++.|+++++.|+
T Consensus       140 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~  177 (263)
T 3ak4_A          140 VIVNTASLAAKVGA------------------------------------------PLLAHYSASKFAVFGWTQALAREM  177 (263)
T ss_dssp             EEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecccccccCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHH
Confidence            99999998775432                                          557899999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCC
Q 022357          242 --PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~  259 (298)
                        .+|+||+|+||+|+|++.
T Consensus       178 ~~~gi~v~~v~Pg~v~t~~~  197 (263)
T 3ak4_A          178 APKNIRVNCVCPGFVKTAMQ  197 (263)
T ss_dssp             GGGTCEEEEEEECSBTTHHH
T ss_pred             hHcCeEEEEEecccccChhh
Confidence              499999999999999863

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2e-35  Score=262.47  Aligned_cols=225  Identities=26%  Similarity=0.302  Sum_probs=181.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +..+|++|||||++|||+++|++|+++|++|+++ .|+.+.++...+++...+..   +.++++|+++.++++++++.+.
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~v~~~~~~~~   99 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGE---AVAIPGDVGNAADIAAMFSAVD   99 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCE---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHHH
Confidence            3457899999999999999999999999999887 67777777787787765443   8999999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC---
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS---  158 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---  158 (298)
                      +.++++|+||||||+.....                      ++.+.+.+.+++.+++|+.|+++++++++|.|++.   
T Consensus       100 ~~~g~id~li~nAg~~~~~~----------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  157 (272)
T 4e3z_A          100 RQFGRLDGLVNNAGIVDYPQ----------------------RVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSG  157 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCC----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTC
T ss_pred             HhCCCCCEEEECCCCCCCCC----------------------ChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccC
Confidence            99999999999999875321                      22345889999999999999999999999999763   


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                      +.|+||++||..+..+.                                         ++....|++||+|+++|+++++
T Consensus       158 ~~g~iv~isS~~~~~~~-----------------------------------------~~~~~~Y~asKaa~~~~~~~la  196 (272)
T 4e3z_A          158 QGGAIVNVSSMAAILGS-----------------------------------------ATQYVDYAASKAAIDTFTIGLA  196 (272)
T ss_dssp             CCEEEEEECCTHHHHCC-----------------------------------------TTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcchHhccCC-----------------------------------------CCCcchhHHHHHHHHHHHHHHH
Confidence            46899999998876432                                         1356789999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      .|+  .+|+||+|+||+|+|++....                ...+|++.++..+.++.......+|..+..+
T Consensus       197 ~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vd  269 (272)
T 4e3z_A          197 REVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVTGSILNVS  269 (272)
T ss_dssp             HHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCccccccCCEEeec
Confidence            998  489999999999999975331                1235888888888887655555666665543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=1.4e-36  Score=271.44  Aligned_cols=188  Identities=28%  Similarity=0.374  Sum_probs=161.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+++|++|||||++|||++++++|+++|++|++++|+.++ .+...+++...+.+   +.++++|+++.++++++++.+.
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~  102 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD---AACVKANVGVVEDIVRMFEEAV  102 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCC---eEEEEcCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999998764 45556666655433   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +.++++|+||||||+....                       ++.+.+.++|++.+++|+.|+++++++++|.|+  +.|
T Consensus       103 ~~~g~iD~lv~~Ag~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g  157 (283)
T 1g0o_A          103 KIFGKLDIVCSNSGVVSFG-----------------------HVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--IGG  157 (283)
T ss_dssp             HHHSCCCEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--TTC
T ss_pred             HHcCCCCEEEECCCcCCCC-----------------------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--cCC
Confidence            9999999999999986432                       122357889999999999999999999999993  468


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                         ++....|++||+|+++|+++++.|+
T Consensus       158 ~iv~isS~~~~~~~-----------------------------------------~~~~~~Y~asK~a~~~~~~~la~e~  196 (283)
T 1g0o_A          158 RLILMGSITGQAKA-----------------------------------------VPKHAVYSGSKGAIETFARCMAIDM  196 (283)
T ss_dssp             EEEEECCGGGTCSS-----------------------------------------CSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEechhhccCC-----------------------------------------CCCCcchHHHHHHHHHHHHHHHHHh
Confidence            99999998776432                                         1237889999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCC
Q 022357          242 --PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~  259 (298)
                        .+|+||+|+||+|+|++.
T Consensus       197 ~~~gi~v~~v~PG~v~t~~~  216 (283)
T 1g0o_A          197 ADKKITVNVVAPGGIKTDMY  216 (283)
T ss_dssp             GGGTCEEEEEEECCBSSHHH
T ss_pred             cccCeEEEEEecCcccchhh
Confidence              489999999999999863

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=6.9e-36  Score=263.29  Aligned_cols=218  Identities=22%  Similarity=0.231  Sum_probs=171.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++.   .+++   +.   .+.++++|+++.++++++++.+.+
T Consensus         6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~---~~---~~~~~~~D~~~~~~v~~~~~~~~~   76 (257)
T 3tl3_A            6 EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL---GD---RARFAAADVTDEAAVASALDLAET   76 (257)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHHT---CT---TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             eecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHhc---CC---ceEEEECCCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999965432   2222   22   388999999999999999998877


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc-----
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-----  157 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----  157 (298)
                       ++++|+||||||+.......                   .+..+.+.+.|++.+++|+.++++++++++|.|++     
T Consensus        77 -~g~id~lv~nAg~~~~~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~  136 (257)
T 3tl3_A           77 -MGTLRIVVNCAGTGNAIRVL-------------------SRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVG  136 (257)
T ss_dssp             -HSCEEEEEECGGGSHHHHHH-------------------HHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC-
T ss_pred             -hCCCCEEEECCCCCCCcccc-------------------cccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccc
Confidence             89999999999986432111                   11113578899999999999999999999999987     


Q ss_pred             ---CCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHH
Q 022357          158 ---SDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT  234 (298)
Q Consensus       158 ---~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~  234 (298)
                         ++.|+||++||..+..+.                                          +....|++||+|+++|+
T Consensus       137 ~~~~~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~  174 (257)
T 3tl3_A          137 PNAEERGVIINTASVAAFDGQ------------------------------------------IGQAAYSASKGGVVGMT  174 (257)
T ss_dssp             -CCCCSEEEEEECCCC--CCH------------------------------------------HHHHHHHHHHHHHHHHH
T ss_pred             cccCCCcEEEEEcchhhcCCC------------------------------------------CCCccHHHHHHHHHHHH
Confidence               556899999998876543                                          34578999999999999


Q ss_pred             HHHHHhC--CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          235 RILAKRY--PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       235 ~~la~e~--~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      ++++.|+  .+|+||+|+||+|+|++....                ...+|++.++..+.++..  ...+|..+..+
T Consensus       175 ~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~s~--~~itG~~i~vd  249 (257)
T 3tl3_A          175 LPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIEN--PMLNGEVIRLD  249 (257)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEES
T ss_pred             HHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCCccCHHHHHHHHHHHhcC--CCCCCCEEEEC
Confidence            9999999  489999999999999986431                234788888888887764  34555555443

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=1.5e-35  Score=264.32  Aligned_cols=225  Identities=20%  Similarity=0.198  Sum_probs=184.6

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+++.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.   .   ++.++++|+++.++++++++.+
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~---~---~~~~~~~Dl~~~~~v~~~~~~~   98 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG---N---RAEFVSTNVTSEDSVLAAIEAA   98 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---T---TEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC---C---ceEEEEcCCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999988888777762   2   3899999999999999999998


Q ss_pred             HHhcCCccEEEEc-cccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc--
Q 022357           81 KTQFGKLDILANN-AGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL--  157 (298)
Q Consensus        81 ~~~~g~id~lv~n-Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--  157 (298)
                       ++++++|++||| ||.........                  ....+.+.+.|++.+++|+.++++++++++|.|.+  
T Consensus        99 -~~~~~id~lv~~aag~~~~~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  159 (281)
T 3ppi_A           99 -NQLGRLRYAVVAHGGFGVAQRIVQ------------------RDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAE  159 (281)
T ss_dssp             -TTSSEEEEEEECCCCCCCCCCSBC------------------TTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             -HHhCCCCeEEEccCcccccccccc------------------cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc
Confidence             888999999999 55443321110                  01112577889999999999999999999999976  


Q ss_pred             ----CCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHH
Q 022357          158 ----SDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAY  233 (298)
Q Consensus       158 ----~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l  233 (298)
                          ++.|+||++||..+..+.                                          +....|++||+|+++|
T Consensus       160 ~~~~~~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~  197 (281)
T 3ppi_A          160 PRENGERGALVLTASIAGYEGQ------------------------------------------IGQTAYAAAKAGVIGL  197 (281)
T ss_dssp             CCTTSCCEEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHH
T ss_pred             ccccCCCeEEEEEecccccCCC------------------------------------------CCCcccHHHHHHHHHH
Confidence                456899999998877543                                          6688999999999999


Q ss_pred             HHHHHHhC--CCcEEEEeeCCeeecCCCCC----------------CCCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          234 TRILAKRY--PKFCVNCVCPGFVKTDINFH----------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       234 ~~~la~e~--~~i~vn~v~PG~v~t~~~~~----------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      +++++.|+  .+|+||+|+||+|+|++...                ....+|++.++..+.++..  ...+|..+..+.
T Consensus       198 ~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~--~~~tG~~i~vdG  274 (281)
T 3ppi_A          198 TIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLLTN--GYINGEVMRLDG  274 (281)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHC--SSCCSCEEEEST
T ss_pred             HHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHcC--CCcCCcEEEECC
Confidence            99999999  48999999999999987533                2245899999998888864  345666655543

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.3e-37  Score=272.18  Aligned_cols=186  Identities=28%  Similarity=0.380  Sum_probs=160.1

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..+++|++|||||++|||++++++|+++|++|++++|++++++...+++.       .+.++++|+++.++++++++++.
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~Dv~d~~~v~~~~~~~~   77 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-------GAVFILCDVTQEDDVKTLVSETI   77 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-------TEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-------CCeEEEcCCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999877666554432       17889999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ++++++|+||||||......                      ++.+.+.++|++.+++|+.++++++++++|.|+++ .|
T Consensus        78 ~~~g~iD~lv~nAg~~~~~~----------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g  134 (270)
T 1yde_A           78 RRFGRLDCVVNNAGHHPPPQ----------------------RPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QG  134 (270)
T ss_dssp             HHHSCCCEEEECCCCCCCCC----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TC
T ss_pred             HHcCCCCEEEECCCCCCCCC----------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CC
Confidence            99999999999999764321                      12235788899999999999999999999999754 58


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|+++|+++++.|+
T Consensus       135 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~  172 (270)
T 1yde_A          135 NVINISSLVGAIGQ------------------------------------------AQAVPYVATKGAVTAMTKALALDE  172 (270)
T ss_dssp             EEEEECCHHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCccccCCC------------------------------------------CCCcccHHHHHHHHHHHHHHHHHh
Confidence            99999997765432                                          557889999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCC
Q 022357          242 --PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~  259 (298)
                        .+|+||+|+||+|+|++.
T Consensus       173 ~~~gi~vn~v~Pg~v~t~~~  192 (270)
T 1yde_A          173 SPYGVRVNCISPGNIWTPLW  192 (270)
T ss_dssp             GGGTCEEEEEEECSBCCHHH
T ss_pred             hhhCcEEEEEEeCccccchh
Confidence              589999999999999864

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=4.5e-36  Score=263.55  Aligned_cols=181  Identities=22%  Similarity=0.248  Sum_probs=153.6

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.        ...   .  +.++++|+++.++++++++++.
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~---~--~~~~~~D~~d~~~~~~~~~~~~   69 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQY---P--FATEVMDVADAAQVAQVCQRLL   69 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCC---S--SEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcC---C--ceEEEcCCCCHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999998652        111   1  6788999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ++++++|+||||||.....+                       +.+.+.++|++.+++|+.++++++++++|.|++++.|
T Consensus        70 ~~~g~id~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g  126 (250)
T 2fwm_X           70 AETERLDALVNAAGILRMGA-----------------------TDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGG  126 (250)
T ss_dssp             HHCSCCCEEEECCCCCCCCC-----------------------TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHcCCCCEEEECCCcCCCCC-----------------------cccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999864321                       2235788999999999999999999999999877789


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|++.|+++++.|+
T Consensus       127 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~  164 (250)
T 2fwm_X          127 AIVTVASDAAHTPR------------------------------------------IGMSAYGASKAALKSLALSVGLEL  164 (250)
T ss_dssp             EEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECchhhCCCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHh
Confidence            99999998876443                                          567899999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~  260 (298)
                        .+|+||+|+||+++|++..
T Consensus       165 ~~~gi~v~~v~Pg~v~t~~~~  185 (250)
T 2fwm_X          165 AGSGVRCNVVSPGSTDTDMQR  185 (250)
T ss_dssp             GGGTCEEEEEEECCC------
T ss_pred             CccCCEEEEEECCcccCcccc
Confidence              4899999999999998753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-35  Score=255.49  Aligned_cols=219  Identities=27%  Similarity=0.260  Sum_probs=186.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~-------~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      +|++|||||+||||++++++|+++|+       +|++++|+.++++...+++...+.   ++.++++|+++.++++++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~   78 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA---LTDTITADISDMADVRRLTT   78 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTC---EEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCC---eeeEEEecCCCHHHHHHHHH
Confidence            68999999999999999999999999       999999998888877777765433   38899999999999999999


Q ss_pred             HHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                      .+.+.++++|+||||||.....+                       +.+.+.+.+++.+++|+.++++++++++|.|+++
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  135 (244)
T 2bd0_A           79 HIVERYGHIDCLVNNAGVGRFGA-----------------------LSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ  135 (244)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCEEEEcCCcCCcCc-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC
Confidence            99999999999999999864321                       2235778999999999999999999999999877


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                      +.++||++||..+..+.                                          +....|++||+|++.|+++++
T Consensus       136 ~~~~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la  173 (244)
T 2bd0_A          136 HSGHIFFITSVAATKAF------------------------------------------RHSSIYCMSKFGQRGLVETMR  173 (244)
T ss_dssp             TCEEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEecchhcCCC------------------------------------------CCCchhHHHHHHHHHHHHHHH
Confidence            77999999998776432                                          567899999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCC------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHA------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      .++  .+|+||+|+||+|.|++....      ...++++.++..+..+..+.....+..+..
T Consensus       174 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~  235 (244)
T 2bd0_A          174 LYARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAYLQPSRTVVEEIILR  235 (244)
T ss_dssp             HHHTTTTEEEEEEEECCBCSTTTCCCCSTTGGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEE
T ss_pred             HHhhccCcEEEEEECCCccchhhhhccccccccCCCHHHHHHHHHHHHhCCccccchheEEe
Confidence            997  589999999999999986542      246889999998888876655555554443

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.1e-35  Score=266.56  Aligned_cols=190  Identities=26%  Similarity=0.249  Sum_probs=157.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-----hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-----KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.     ++++.+.+.+...+..   +.++++|+++.+++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~---~~~~~~Dvtd~~~v~~~~   78 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVD---LRTLELDVQSQVSVDRAI   78 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCC---EEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCc---EEEEEeecCCHHHHHHHH
Confidence            35689999999999999999999999999999988863     3444555555544433   899999999999999999


Q ss_pred             HHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc
Q 022357           78 DFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL  157 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  157 (298)
                      +++.+++|++|+||||||+....                       ++.+.+.+++++.+++|+.|+++++++++|.|++
T Consensus        79 ~~~~~~~g~iD~lVnnAG~~~~~-----------------------~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~  135 (324)
T 3u9l_A           79 DQIIGEDGRIDVLIHNAGHMVFG-----------------------PAEAFTPEQFAELYDINVLSTQRVNRAALPHMRR  135 (324)
T ss_dssp             HHHHHHHSCCSEEEECCCCCBCS-----------------------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCEEEECCCcCCCC-----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence            99999999999999999986443                       2234688999999999999999999999999998


Q ss_pred             CCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH
Q 022357          158 SDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       158 ~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l  237 (298)
                      ++.|+||++||..+...                                         .++....|++||+|+++|++++
T Consensus       136 ~~~g~iV~isS~~~~~~-----------------------------------------~~~~~~~Y~asKaa~~~~~~~l  174 (324)
T 3u9l_A          136 QKHGLLIWISSSSSAGG-----------------------------------------TPPYLAPYFAAKAAMDAIAVQY  174 (324)
T ss_dssp             HTCEEEEEECCGGGTSC-----------------------------------------CCSSCHHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEecchhccC-----------------------------------------CCCcchhHHHHHHHHHHHHHHH
Confidence            88899999999877632                                         1255688999999999999999


Q ss_pred             HHhC--CCcEEEEeeCCeeecCCC
Q 022357          238 AKRY--PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       238 a~e~--~~i~vn~v~PG~v~t~~~  259 (298)
                      +.|+  .||+||+|+||+|.|++.
T Consensus       175 a~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          175 ARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             HHHHHTTTEEEEEEEECCC-----
T ss_pred             HHHhhhhCcEEEEEECCccccCch
Confidence            9998  589999999999998754

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=1.5e-35  Score=261.92  Aligned_cols=190  Identities=27%  Similarity=0.300  Sum_probs=155.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++|++|||||+||||++++++|+++|++|++++|+.+++++..+++...+..   +.++.+|+++.++++++++.+.+
T Consensus        11 ~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   87 (266)
T 1xq1_A           11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ---VTGSVCDASLRPEREKLMQTVSS   87 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---eEEEECCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988888888887765433   88999999999999999999999


Q ss_pred             hc-CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           83 QF-GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        83 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      .+ +++|+||||||.....+                       +.+.+.+.+++.+++|+.++++++++++|.|++++.+
T Consensus        88 ~~~~~id~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~  144 (266)
T 1xq1_A           88 MFGGKLDILINNLGAIRSKP-----------------------TLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCG  144 (266)
T ss_dssp             HHTTCCSEEEEECCC-----------------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred             HhCCCCcEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc
Confidence            98 89999999999764321                       1235778899999999999999999999999877779


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||++++.|+++++.++
T Consensus       145 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~  182 (266)
T 1xq1_A          145 NIIFMSSIAGVVSA------------------------------------------SVGSIYSATKGALNQLARNLACEW  182 (266)
T ss_dssp             EEEEEC----------------------------------------------------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEccchhccCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHH
Confidence            99999998765432                                          556889999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~  260 (298)
                        .+|+||+|+||++.|++..
T Consensus       183 ~~~gi~v~~v~Pg~v~t~~~~  203 (266)
T 1xq1_A          183 ASDGIRANAVAPAVIATPLAE  203 (266)
T ss_dssp             GGGTCEEEEEECCSCC-----
T ss_pred             hHhCcEEEEEeeCCCccchhh
Confidence              5999999999999999753

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=2e-36  Score=268.05  Aligned_cols=212  Identities=25%  Similarity=0.321  Sum_probs=173.9

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+++.+|++|||||++|||++++++|+++|++|++++|+.++           +   ..+.++++|+++.++++++++.+
T Consensus         3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~---~~~~~~~~Dl~~~~~v~~~~~~~   68 (264)
T 2dtx_A            3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------E---AKYDHIECDVTNPDQVKASIDHI   68 (264)
T ss_dssp             CGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------S---CSSEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------C---CceEEEEecCCCHHHHHHHHHHH
Confidence            345788999999999999999999999999999999998754           1   13788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+++|++|+||||||.....+                       +.+.+.+.|++.+++|+.|+++++++++|.|++++.
T Consensus        69 ~~~~g~iD~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  125 (264)
T 2dtx_A           69 FKEYGSISVLVNNAGIESYGK-----------------------IESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRD  125 (264)
T ss_dssp             HHHHSCCCEEEECCCCCCCBC-----------------------TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS
T ss_pred             HHHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence            999999999999999864321                       223578899999999999999999999999988778


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|++.|+++++.|
T Consensus       126 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e  163 (264)
T 2dtx_A          126 PSIVNISSVQASIIT------------------------------------------KNASAYVTSKHAVIGLTKSIALD  163 (264)
T ss_dssp             CEEEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEECCchhccCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHH
Confidence            999999998776443                                          56789999999999999999999


Q ss_pred             C-CCcEEEEeeCCeeecCCCCCC--------------------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          241 Y-PKFCVNCVCPGFVKTDINFHA--------------------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       241 ~-~~i~vn~v~PG~v~t~~~~~~--------------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      + +.|+||+|+||+++|++....                          .+.+|++.++..+.++.......+|..+.
T Consensus       164 ~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~  241 (264)
T 2dtx_A          164 YAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLY  241 (264)
T ss_dssp             HTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEE
Confidence            8 349999999999999863210                          13466777777666665433334444443

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=8e-35  Score=256.38  Aligned_cols=224  Identities=26%  Similarity=0.263  Sum_probs=185.4

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |.++.+|++|||||+||||++++++|+++|++|++++| +.+.+++..+++...+.   .+.++++|+++.+++++++++
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~   78 (261)
T 1gee_A            2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---EAIAVKGDVTVESDVINLVQS   78 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC---EEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC---ceEEEECCCCCHHHHHHHHHH
Confidence            34578999999999999999999999999999999999 77777777777765443   388999999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+.++++|+||||||.....+                       +.+.+.+.+++.+++|+.++++++++++|.|++++
T Consensus        79 ~~~~~g~id~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  135 (261)
T 1gee_A           79 AIKEFGKLDVMINNAGLENPVS-----------------------SHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEND  135 (261)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHcCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC
Confidence            9999999999999999864321                       12357788999999999999999999999998776


Q ss_pred             -CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          160 -SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       160 -~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                       .++||++||..+..+.                                          +....|++||+|++.|+++++
T Consensus       136 ~~~~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la  173 (261)
T 1gee_A          136 IKGTVINMSSVHEKIPW------------------------------------------PLFVHYAASKGGMKLMTETLA  173 (261)
T ss_dssp             CCCEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCHHhcCCC------------------------------------------CCccHHHHHHHHHHHHHHHHH
Confidence             6899999997765432                                          567899999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCC-----------------CCCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFH-----------------AGILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~-----------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      .++  .+|+||+|+||+|.|++...                 ....+|++.++..+.++.......+|..+..
T Consensus       174 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  246 (261)
T 1gee_A          174 LEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFA  246 (261)
T ss_dssp             HHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEE
Confidence            998  48999999999999987421                 1134788888888887764434445555443

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=1e-34  Score=251.76  Aligned_cols=216  Identities=27%  Similarity=0.254  Sum_probs=175.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++|++|||||+||||++++++|+++|++|++++|+.++++...+++.       .+.++++|+++.++++++++.+.+.+
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-------GALPLPGDVREEGDWARAVAAMEEAF   76 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-------TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-------hceEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999877666555442       27889999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      +++|+||||||.....                       ++.+.+.+.+++.+++|+.+++++++.++|.|++++.++||
T Consensus        77 ~~id~li~~Ag~~~~~-----------------------~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv  133 (234)
T 2ehd_A           77 GELSALVNNAGVGVMK-----------------------PVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIV  133 (234)
T ss_dssp             SCCCEEEECCCCCCCS-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred             CCCCEEEECCCcCCCC-----------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEE
Confidence            9999999999976432                       12235788899999999999999999999999887779999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||..+..+.                                          +....|++||+|++.|+++++.++  .
T Consensus       134 ~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~  171 (234)
T 2ehd_A          134 NVGSLAGKNPF------------------------------------------KGGAAYNASKFGLLGLAGAAMLDLREA  171 (234)
T ss_dssp             EECCTTTTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             EECCchhcCCC------------------------------------------CCCchhhHHHHHHHHHHHHHHHHHhhc
Confidence            99998765432                                          567899999999999999999998  5


Q ss_pred             CcEEEEeeCCeeecCCCCCCC----CCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          243 KFCVNCVCPGFVKTDINFHAG----ILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~~~----~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +|++|+|+||+++|++....+    +.+|++.++..+..+..+.....+.+.+.
T Consensus       172 gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~g~~~~~  225 (234)
T 2ehd_A          172 NVRVVNVLPGSVDTGFAGNTPGQAWKLKPEDVAQAVLFALEMPGHAMVSEIELR  225 (234)
T ss_dssp             TEEEEEEECC----------------CCHHHHHHHHHHHHHSCCSSCCCEEECC
T ss_pred             CcEEEEEEeCCCcCCcccccccccCCCCHHHHHHHHHHHhCCCcccccceEEEe
Confidence            899999999999998764321    47899999999998887666666655543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=5e-34  Score=252.18  Aligned_cols=264  Identities=41%  Similarity=0.637  Sum_probs=202.0

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHH-CCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLAS-KGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~-~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .++|++|||||+||||++++++|++ +|++|++++|+.++.....+++...+..   +.++.+|+++.++++++++++.+
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dl~~~~~~~~~~~~~~~   78 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLS---PRFHQLDIDDLQSIRALRDFLRK   78 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCC---CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCe---eEEEECCCCCHHHHHHHHHHHHH
Confidence            3579999999999999999999999 9999999999988888888888765433   88999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||....... .                      ....+.+++.+++|+.|+++++++++|.|++  .|+
T Consensus        79 ~~g~id~li~~Ag~~~~~~~-~----------------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~  133 (276)
T 1wma_A           79 EYGGLDVLVNNAGIAFKVAD-P----------------------TPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGR  133 (276)
T ss_dssp             HHSSEEEEEECCCCCCCTTC-C----------------------SCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEE
T ss_pred             hcCCCCEEEECCcccccCCC-c----------------------cccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCE
Confidence            99999999999997643210 0                      0124778899999999999999999999975  379


Q ss_pred             EEEEccCccccc--CCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          163 LVNLSSYVSALK--DLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       163 iv~vsS~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ||++||..+..+  ..++..... .+...+...+.......+......+.....++ + ...|++||+|++.|++.++.+
T Consensus       134 iv~~sS~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~Y~~sK~a~~~~~~~la~~  210 (276)
T 1wma_A          134 VVNVSSIMSVRALKSCSPELQQK-FRSETITEEELVGLMNKFVEDTKKGVHQKEGW-P-SSAYGVTKIGVTVLSRIHARK  210 (276)
T ss_dssp             EEEECCHHHHHHHHTSCHHHHHH-HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTC-C-SCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECChhhhcccccCChhHHhh-ccccccchhhhhhhhhhhhhhhcccccccCCC-c-cchhHHHHHHHHHHHHHHHHH
Confidence            999999877632  111111111 12234444444444444433332222111122 2 378999999999999999999


Q ss_pred             C------CCcEEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCC--CCCcceEeccCccCCC
Q 022357          241 Y------PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPD--GGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~------~~i~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~l~~~~a~~  298 (298)
                      +      .+|+||+|+||+|.|++.....+.++++.++.++.++..+.  ...+|.+|..+....|
T Consensus       211 ~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~~~~~~  276 (276)
T 1wma_A          211 LSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQW  276 (276)
T ss_dssp             HHHHCTTSCCEEEEEECCSBCSTTTCTTCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEECC
T ss_pred             hhcccCCCceEEEEecCCccccCcCCccccCChhHhhhhHhhhhcCcccccccCceEeccCceecC
Confidence            8      48999999999999999876667899999999999998663  4678888876655554

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=3e-36  Score=267.44  Aligned_cols=229  Identities=20%  Similarity=0.209  Sum_probs=175.5

Q ss_pred             CCcCCCcEEEEeCC--CCchhHHHHHHHHHCCCEEEEEecCchhh-HHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHH
Q 022357            1 MAEATKKYAVVTGS--NKGIGFETVRQLASKGITVVLTARDEKRG-LEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         1 m~~~~~~~vlITGa--s~gIG~a~a~~La~~G~~Vii~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      |+.+++|++|||||  ++|||++++++|+++|++|++++|+.++. ++..+++   +.   ++.++++|+++.+++++++
T Consensus         2 m~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~---~~~~~~~Dv~~~~~v~~~~   75 (269)
T 2h7i_A            2 TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PA---KAPLLELDVQNEEHLASLA   75 (269)
T ss_dssp             CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---SS---CCCEEECCTTCHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---CC---CceEEEccCCCHHHHHHHH
Confidence            45688999999999  99999999999999999999999987652 3333222   21   3788999999999999999


Q ss_pred             HHHHHhcC---CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhh
Q 022357           78 DFIKTQFG---KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL  154 (298)
Q Consensus        78 ~~~~~~~g---~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  154 (298)
                      +++.+.+|   ++|+||||||......                  ..+.++.+.+.++|++.+++|+.++++++++++|.
T Consensus        76 ~~~~~~~g~~~~iD~lv~nAg~~~~~~------------------~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  137 (269)
T 2h7i_A           76 GRVTEAIGAGNKLDGVVHSIGFMPQTG------------------MGINPFFDAPYADVSKGIHISAYSYASMAKALLPI  137 (269)
T ss_dssp             HHHHHHHCTTCCEEEEEECCCCCCGGG------------------STTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             HHHHHHhCCCCCceEEEECCccCcccc------------------ccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence            99999999   9999999999764210                  00122334688999999999999999999999999


Q ss_pred             hccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHH
Q 022357          155 LELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT  234 (298)
Q Consensus       155 ~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~  234 (298)
                      |++  .|+||++||..+ .+                                          .+.+..|++||+|+++|+
T Consensus       138 ~~~--~g~iv~iss~~~-~~------------------------------------------~~~~~~Y~asKaa~~~l~  172 (269)
T 2h7i_A          138 MNP--GGSIVGMDFDPS-RA------------------------------------------MPAYNWMTVAKSALESVN  172 (269)
T ss_dssp             EEE--EEEEEEEECCCS-SC------------------------------------------CTTTHHHHHHHHHHHHHH
T ss_pred             hcc--CCeEEEEcCccc-cc------------------------------------------cCchHHHHHHHHHHHHHH
Confidence            975  379999999654 22                                          155789999999999999


Q ss_pred             HHHHHhC--CCcEEEEeeCCeeecCCCCCC--CCCChh-----------hhhhhhhh-hhccCCCCCcceEeccCccCCC
Q 022357          235 RILAKRY--PKFCVNCVCPGFVKTDINFHA--GILSVE-----------EGAESPVK-LALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       235 ~~la~e~--~~i~vn~v~PG~v~t~~~~~~--~~~~~~-----------~~a~~~~~-~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      ++++.|+  .+|+||+|+||+|+|++....  .....+           .....|+. +...|++.+....|++++.++|
T Consensus       173 ~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~  252 (269)
T 2h7i_A          173 RFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPA  252 (269)
T ss_dssp             HHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTT
T ss_pred             HHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHHHHHhCchhcc
Confidence            9999998  589999999999999864321  000110           01223555 4556666666666776665544

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1.3e-35  Score=261.48  Aligned_cols=213  Identities=27%  Similarity=0.299  Sum_probs=170.1

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+++++              +.++++|+++.++++++++.+.
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--------------~~~~~~Dl~d~~~v~~~~~~~~   82 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG--------------FLAVKCDITDTEQVEQAYKEIE   82 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT--------------SEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc--------------ceEEEecCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999998754321              6788999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +.++++|+||||||.....+                       +.+.+.++|++.+++|+.++++++++++|.|++++.|
T Consensus        83 ~~~g~iD~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g  139 (253)
T 2nm0_A           83 ETHGPVEVLIANAGVTKDQL-----------------------LMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKG  139 (253)
T ss_dssp             HHTCSCSEEEEECSCCTTTC--------------------------CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCE
T ss_pred             HHcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999864321                       2234677888999999999999999999999877779


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|++.|+++++.|+
T Consensus       140 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~  177 (253)
T 2nm0_A          140 RVVLISSVVGLLGS------------------------------------------AGQANYAASKAGLVGFARSLAREL  177 (253)
T ss_dssp             EEEEECCCCCCCCH------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECchhhCCCC------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHh
Confidence            99999998876432                                          335689999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                        .+|+||+|+||+|+|++....               ...+|++.++..+.++..+....+|..+..+
T Consensus       178 ~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vd  246 (253)
T 2nm0_A          178 GSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIPVD  246 (253)
T ss_dssp             CSSSEEEEEEEECSBCC---------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCcEEEEC
Confidence              589999999999999975321               1346777777777777654445555555443

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=1.4e-34  Score=255.59  Aligned_cols=222  Identities=23%  Similarity=0.243  Sum_probs=177.1

Q ss_pred             cCCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      ++++|++|||||+  +|||++++++|+++|++|++++|+.+ ..+..+++....+.   +.++++|+++.++++++++.+
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~---~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGG---ALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTC---CEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCC---cEEEECCCCCHHHHHHHHHHH
Confidence            3678999999999  99999999999999999999999875 45555565543322   688999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .++++++|+||||||.......                   ..++.+.+.+.|++.+++|+.++++++++++|.|++  .
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~-------------------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~  139 (261)
T 2wyu_A           81 KEAFGGLDYLVHAIAFAPREAM-------------------EGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--G  139 (261)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHH-------------------SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--E
T ss_pred             HHHcCCCCEEEECCCCCCcccC-------------------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--C
Confidence            9999999999999997642100                   012234578899999999999999999999999974  4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|++.|+++++.|
T Consensus       140 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e  177 (261)
T 2wyu_A          140 GGIVTLTYYASEKVV------------------------------------------PKYNVMAIAKAALEASVRYLAYE  177 (261)
T ss_dssp             EEEEEEECGGGTSBC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEecccccCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHH
Confidence            899999997776443                                          55788999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      +  .+|+||+|+||+|+|++....                 ...+|++.++..+.++.......+|..+.
T Consensus       178 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~  247 (261)
T 2wyu_A          178 LGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVY  247 (261)
T ss_dssp             HGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEE
Confidence            8  489999999999999975321                 13467777777777665433334444443

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1e-34  Score=257.89  Aligned_cols=213  Identities=23%  Similarity=0.277  Sum_probs=183.5

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +.+.+|++|||||+||||++++++|+++|++|++++|+.+.+++..++++..+..   +.++++|+++.++++++++.+.
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK---VHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCe---EEEEEeeCCCHHHHHHHHHHHH
Confidence            4578899999999999999999999999999999999998888888888765433   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +.++++|+||||||.....+                       +.+.+.+.+++.+++|+.+++.+++.++|.|++++.+
T Consensus       104 ~~~g~iD~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  160 (272)
T 1yb1_A          104 AEIGDVSILVNNAGVVYTSD-----------------------LFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHG  160 (272)
T ss_dssp             HHTCCCSEEEECCCCCCCCC-----------------------CGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE
T ss_pred             HHCCCCcEEEECCCcCCCcc-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999865332                       1235778899999999999999999999999887789


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|++.|+++++.++
T Consensus       161 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~l~~~la~e~  198 (272)
T 1yb1_A          161 HIVTVASAAGHVSV------------------------------------------PFLLAYCSSKFAAVGFHKTLTDEL  198 (272)
T ss_dssp             EEEEECCCC-CCCH------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEechhhcCCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHH
Confidence            99999998876432                                          335789999999999999999997


Q ss_pred             -----CCcEEEEeeCCeeecCCCCC-----CCCCChhhhhhhhhhhhccCC
Q 022357          242 -----PKFCVNCVCPGFVKTDINFH-----AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       242 -----~~i~vn~v~PG~v~t~~~~~-----~~~~~~~~~a~~~~~~~~~~~  282 (298)
                           .+|+||+|+||+|+|++...     ....++++.++..+..+..++
T Consensus       199 ~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          199 AALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             HHTTCTTEEEEEEEETHHHHCSTTCTHHHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             HHhCCCCeEEEEEeCCcccCCccccccccccCCCCHHHHHHHHHHHHHcCC
Confidence                 38999999999999998542     245789999999988887554

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-34  Score=258.16  Aligned_cols=224  Identities=27%  Similarity=0.309  Sum_probs=183.5

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..+.+|++|||||+||||++++++|+++|++|++++|+.+++++..++++..+..   +.++++|+++.++++++++.+.
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dl~d~~~v~~~~~~~~  116 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE---SSGYAGDVSKKEEISEVINKIL  116 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCc---eeEEECCCCCHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999988888887777765433   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +.++++|+||||||.....+                       +.+.+.+.+++.+++|+.|+++++++++|.|++++.+
T Consensus       117 ~~~~~id~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  173 (285)
T 2c07_A          117 TEHKNVDILVNNAGITRDNL-----------------------FLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYG  173 (285)
T ss_dssp             HHCSCCCEEEECCCCCCCCC-----------------------TTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCE
T ss_pred             HhcCCCCEEEECCCCCCCCc-----------------------hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999864321                       1235778899999999999999999999999877778


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|++.|+++++.++
T Consensus       174 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~  211 (285)
T 2c07_A          174 RIINISSIVGLTGN------------------------------------------VGQANYSSSKAGVIGFTKSLAKEL  211 (285)
T ss_dssp             EEEEECCTHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECChhhccCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHH
Confidence            99999998765432                                          557899999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                        .+|+||+|+||+++|++....               ...++++.++..+.++.......+|..+..+
T Consensus       212 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~  280 (285)
T 2c07_A          212 ASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVID  280 (285)
T ss_dssp             GGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeC
Confidence              489999999999999975321               1347888888887777654444455555443

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=6.6e-35  Score=255.48  Aligned_cols=216  Identities=25%  Similarity=0.244  Sum_probs=167.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++..      .+.++.+|+++.+++++++++   
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~---   81 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKD------NYTIEVCNLANKEECSNLISK---   81 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCS------SEEEEECCTTSHHHHHHHHHT---
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhcc------CccEEEcCCCCHHHHHHHHHh---
Confidence            46789999999999999999999999999999999998888777766642      288899999999998877653   


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                       ++++|+||||||......                       +.+.+.+++++.+++|+.++++++++++|.|++++.|+
T Consensus        82 -~~~id~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  137 (249)
T 3f9i_A           82 -TSNLDILVCNAGITSDTL-----------------------AIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGR  137 (249)
T ss_dssp             -CSCCSEEEECCC------------------------------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             -cCCCCEEEECCCCCCCCc-----------------------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence             478999999999875432                       12346788899999999999999999999998877899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.++ 
T Consensus       138 iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~  175 (249)
T 3f9i_A          138 IINISSIVGIAGN------------------------------------------PGQANYCASKAGLIGMTKSLSYEVA  175 (249)
T ss_dssp             EEEECCCCC--CC------------------------------------------SCSHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEEccHHhccCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHH
Confidence            9999998877543                                          667899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                       .+|+||+|+||+|+|++....               .+.++++.++..+.++.......+|..+..+
T Consensus       176 ~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vd  243 (249)
T 3f9i_A          176 TRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVN  243 (249)
T ss_dssp             GGTEEEEEEEECCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEEC
Confidence             589999999999999986442               2346788888887777655555556655443

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=4.3e-35  Score=256.95  Aligned_cols=211  Identities=21%  Similarity=0.262  Sum_probs=170.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||++|||++++++|+++|++|++++|+++++++              +..+++|+++.++++++++.+.+
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--------------~~~~~~D~~~~~~~~~~~~~~~~   77 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG--------------LFGVEVDVTDSDAVDRAFTAVEE   77 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT--------------SEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--------------hcCeeccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999998754321              22488999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||.....                       ++.+.+.+.|++.+++|+.++++++++++|.|++++.|+
T Consensus        78 ~~g~id~lv~~Ag~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~  134 (247)
T 1uzm_A           78 HQGPVEVLVSNAGLSADA-----------------------FLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGR  134 (247)
T ss_dssp             HHSSCSEEEEECSCCC----------------------------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEE
T ss_pred             HcCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCE
Confidence            999999999999986432                       122357889999999999999999999999998877799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|++.|+++++.|+ 
T Consensus       135 iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~  172 (247)
T 1uzm_A          135 MIFIGSVSGLWGI------------------------------------------GNQANYAASKAGVIGMARSIARELS  172 (247)
T ss_dssp             EEEECCCCC-----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEECCHhhccCC------------------------------------------CCChhHHHHHHHHHHHHHHHHHHhh
Confidence            9999998876442                                          557899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCC---------------CCCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 -PKFCVNCVCPGFVKTDINFH---------------AGILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~---------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                       .+|+||+|+||+|+|++...               ..+.+|++.++..+.++.......+|..+..
T Consensus       173 ~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~v  239 (247)
T 1uzm_A          173 KANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPV  239 (247)
T ss_dssp             GGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCCEEEE
Confidence             58999999999999986421               1134777777777777654444445555443

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3e-35  Score=257.60  Aligned_cols=215  Identities=24%  Similarity=0.260  Sum_probs=170.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+++|++|||||++|||++++++|+++|++|++++|+++++++.. ++.       .+.++++|+++.++++    ++
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~-------~~~~~~~D~~~~~~~~----~~   68 (246)
T 2ag5_A            1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYP-------GIQTRVLDVTKKKQID----QF   68 (246)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GST-------TEEEEECCTTCHHHHH----HH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hcc-------CceEEEeeCCCHHHHH----HH
Confidence            77889999999999999999999999999999999999976554432 221       2888999999999987    44


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||.....+                       +.+.+.++|++.+++|+.++++++++++|.|++++.
T Consensus        69 ~~~~~~id~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~  125 (246)
T 2ag5_A           69 ANEVERLDVLFNVAGFVHHGT-----------------------VLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKS  125 (246)
T ss_dssp             HHHCSCCSEEEECCCCCCCBC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHhCCCCEEEECCccCCCCC-----------------------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            456789999999999864331                       223578899999999999999999999999987777


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                         ++....|++||+|++.|+++++.|
T Consensus       126 g~iv~isS~~~~~~~-----------------------------------------~~~~~~Y~~sK~a~~~~~~~la~e  164 (246)
T 2ag5_A          126 GNIINMSSVASSVKG-----------------------------------------VVNRCVYSTTKAAVIGLTKSVAAD  164 (246)
T ss_dssp             EEEEEECCSBTTTBC-----------------------------------------CTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEechHhCcCC-----------------------------------------CCCCccHHHHHHHHHHHHHHHHHH
Confidence            999999998776432                                         125789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCC---------------------CCCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFH---------------------AGILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~---------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      +  .+|+||+|+||+|+|++...                     ....+|++.++..+.++.......+|..+.
T Consensus       165 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~  238 (246)
T 2ag5_A          165 FIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVI  238 (246)
T ss_dssp             HGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEE
Confidence            8  48999999999999986321                     012356666666666655443444444443

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=4.3e-34  Score=251.42  Aligned_cols=221  Identities=26%  Similarity=0.321  Sum_probs=183.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+++....++++..+.+   +.++++|+++.++++++++.+.+.
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHD---VSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---eEEEEecCCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999988887777777765433   889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      ++++|+||||||......                      ++.+.+.+.+++.+++|+.++++++++++|.|++++.++|
T Consensus        88 ~~~id~vi~~Ag~~~~~~----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~i  145 (260)
T 3awd_A           88 EGRVDILVACAGICISEV----------------------KAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVI  145 (260)
T ss_dssp             HSCCCEEEECCCCCCCSC----------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             cCCCCEEEECCCCCCCCC----------------------CcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEE
Confidence            999999999999764211                      1123577889999999999999999999999987677899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCC--chhhhHHHHHHHHHHHHHHhC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHS--SAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~al~~l~~~la~e~  241 (298)
                      |++||..+..+.                                          +..  ..|++||++++.|+++++.++
T Consensus       146 v~~sS~~~~~~~------------------------------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~  183 (260)
T 3awd_A          146 VAIGSMSGLIVN------------------------------------------RPQQQAAYNASKAGVHQYIRSLAAEW  183 (260)
T ss_dssp             EEECCGGGTSCC------------------------------------------SSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecchhcccC------------------------------------------CCCCccccHHHHHHHHHHHHHHHHHh
Confidence            999998776432                                          333  789999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCC-C----------------CCCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          242 --PKFCVNCVCPGFVKTDINF-H----------------AGILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~-~----------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                        .+|+||+|+||+|+|++.. .                ....++++.++..+.++.......+|..+.
T Consensus       184 ~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  252 (260)
T 3awd_A          184 APHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGAIVN  252 (260)
T ss_dssp             GGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhccCCCcEEE
Confidence              5899999999999999864 1                013478888888877776544444454443

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2.8e-34  Score=251.21  Aligned_cols=223  Identities=25%  Similarity=0.314  Sum_probs=183.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHH-HhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +|++|||||+||||++++++|+++|++|++++|+.+++++..+++ +..+   .++.++++|+++.++++++++++.+++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA---DKVLRVRADVADEGDVNAAIAATMEQF   78 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTG---GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999999988777776666 3222   238899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      +++|+||||||.....+.                    ..+.+.+.+++++.+++|+.+++.+++.++|.|++++.++||
T Consensus        79 ~~id~li~~Ag~~~~~~~--------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv  138 (250)
T 2cfc_A           79 GAIDVLVNNAGITGNSEA--------------------GVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIV  138 (250)
T ss_dssp             SCCCEEEECCCCCCCTTC--------------------CSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCCCEEEECCCCCCCCCc--------------------chhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEE
Confidence            999999999997643210                    012335788899999999999999999999999877778999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||..+..+.                                          +....|++||++++.|+++++.++  .
T Consensus       139 ~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~  176 (250)
T 2cfc_A          139 NIASVASLVAF------------------------------------------PGRSAYTTSKGAVLQLTKSVAVDYAGS  176 (250)
T ss_dssp             EECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             EECChhhccCC------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhccc
Confidence            99998776432                                          557899999999999999999998  4


Q ss_pred             CcEEEEeeCCeeecCCCCC-C----------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          243 KFCVNCVCPGFVKTDINFH-A----------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~-~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +|+||+|+||+|.|++... .                .+.++++.++..+.++..+....+|..+..+
T Consensus       177 gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  244 (250)
T 2cfc_A          177 GIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALVMD  244 (250)
T ss_dssp             TEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEES
T ss_pred             CeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccCCEEEEC
Confidence            9999999999999997532 0                1237788888888777655555556655443

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=1.1e-36  Score=277.98  Aligned_cols=192  Identities=15%  Similarity=0.270  Sum_probs=154.8

Q ss_pred             CCcEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCch---------hhHHHHHHHHhcCCCCcceeEEEeccCcH--H
Q 022357            5 TKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEK---------RGLEAVEKLKASGVDPELLLFHQLDISDL--A   71 (298)
Q Consensus         5 ~~~~vlITGas~--gIG~a~a~~La~~G~~Vii~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dls~~--~   71 (298)
                      ++|++|||||++  |||+++|++|+++|++|++++|++.         ++......+.........+.++++|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            368999999986  9999999999999999998887652         11111111111122223478889999988  8


Q ss_pred             ------------------HHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHH
Q 022357           72 ------------------SVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELA  133 (298)
Q Consensus        72 ------------------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (298)
                                        +++++++.+.+++|++|+||||||+....                     ..++.+.+.+.|
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~---------------------~~~~~~~~~~~~  139 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEV---------------------QKDLLNTSRKGY  139 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTT---------------------TSCGGGCCHHHH
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccC---------------------CCCcccCCHHHH
Confidence                              99999999999999999999999974211                     112334688999


Q ss_pred             HhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhc
Q 022357          134 VECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIAN  213 (298)
Q Consensus       134 ~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (298)
                      ++.+++|+.|+++++++++|+|+++  |+||++||..+..+.                                      
T Consensus       140 ~~~~~vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~~~--------------------------------------  179 (329)
T 3lt0_A          140 LDALSKSSYSLISLCKYFVNIMKPQ--SSIISLTYHASQKVV--------------------------------------  179 (329)
T ss_dssp             HHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSCC--------------------------------------
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHhhC--CeEEEEeCccccCCC--------------------------------------
Confidence            9999999999999999999999865  899999998876543                                      


Q ss_pred             CCCCCCCc-hhhhHHHHHHHHHHHHHHhC-C--CcEEEEeeCCeeecCCCCC
Q 022357          214 RGWCPHSS-AYKVSKAVINAYTRILAKRY-P--KFCVNCVCPGFVKTDINFH  261 (298)
Q Consensus       214 ~~~~~~~~-~Y~~sK~al~~l~~~la~e~-~--~i~vn~v~PG~v~t~~~~~  261 (298)
                          +... .|++||+|+.+|+++|+.|+ +  +|+||+|+||+|+|++...
T Consensus       180 ----~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~  227 (329)
T 3lt0_A          180 ----PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATA  227 (329)
T ss_dssp             ----TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHT
T ss_pred             ----CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhh
Confidence                5564 89999999999999999998 4  8999999999999997643

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=8.2e-35  Score=259.02  Aligned_cols=192  Identities=23%  Similarity=0.303  Sum_probs=163.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++|++|||||+||||++++++|+++|++|++++|+.+..+...+.+...+..   +.++++|+++.++++++++.+.+
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~~~~~~~~~~~  107 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVH---SKAYKCNISDPKSVEETISQQEK  107 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---ceEEEeecCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999988777776666654433   88999999999999999999999


Q ss_pred             hcCCccEEEEccccCCc-ccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           83 QFGKLDILANNAGIASV-KFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      .++++|+||||||.... .+..+                      +.+.+.+++.+++|+.+++.+++.++|.|++++.+
T Consensus       108 ~~g~id~li~~Ag~~~~~~~~~~----------------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~  165 (279)
T 3ctm_A          108 DFGTIDVFVANAGVTWTQGPEID----------------------VDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKG  165 (279)
T ss_dssp             HHSCCSEEEECGGGSTTC--CCC----------------------SSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred             HhCCCCEEEECCcccccCCcccc----------------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence            99999999999997643 21110                      24778899999999999999999999999877779


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                        ..+....|++||+|++.|+++++.++
T Consensus       166 ~iv~isS~~~~~~~----------------------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~  205 (279)
T 3ctm_A          166 SLIITSSISGKIVN----------------------------------------IPQLQAPYNTAKAACTHLAKSLAIEW  205 (279)
T ss_dssp             EEEEECCCTTSCC-------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEECchHhccCC----------------------------------------CCCCcccHHHHHHHHHHHHHHHHHHh
Confidence            99999998775431                                        01556789999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~  260 (298)
                        .+ +||+|+||+++|++..
T Consensus       206 ~~~~-~v~~v~Pg~v~t~~~~  225 (279)
T 3ctm_A          206 APFA-RVNTISPGYIDTDITD  225 (279)
T ss_dssp             TTTC-EEEEEEECSBSSTTTS
T ss_pred             cccC-CEEEEeccCCcccccc
Confidence              47 9999999999999864

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=3.2e-34  Score=250.31  Aligned_cols=224  Identities=29%  Similarity=0.299  Sum_probs=183.8

Q ss_pred             CC-cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHh-cCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            1 MA-EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA-SGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         1 m~-~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      |+ ++++|+++||||+||||++++++|+++|++|++++|+.++++...+++.. .+.   .+.++++|+++.++++++++
T Consensus         1 m~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~   77 (248)
T 2pnf_A            1 MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV---KAHGVEMNLLSEESINKAFE   77 (248)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCC---CEEEEECCTTCHHHHHHHHH
T ss_pred             CccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCC---ceEEEEccCCCHHHHHHHHH
Confidence            44 36789999999999999999999999999999999998887777777764 232   28899999999999999999


Q ss_pred             HHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                      ++.+.++++|+||||||.....+                       +.+.+.+.+++.+++|+.++++++++++|.|+++
T Consensus        78 ~~~~~~~~~d~vi~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  134 (248)
T 2pnf_A           78 EIYNLVDGIDILVNNAGITRDKL-----------------------FLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ  134 (248)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH
T ss_pred             HHHHhcCCCCEEEECCCCCCCCc-----------------------cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence            99999999999999999764321                       1235778899999999999999999999999877


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                      +.++||++||..+..+.                                          +....|++||++++.|++.++
T Consensus       135 ~~~~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la  172 (248)
T 2pnf_A          135 RWGRIVNISSVVGFTGN------------------------------------------VGQVNYSTTKAGLIGFTKSLA  172 (248)
T ss_dssp             TCEEEEEECCHHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEccHHhcCCC------------------------------------------CCCchHHHHHHHHHHHHHHHH
Confidence            77899999997665332                                          557889999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      .++  .+|++|+|+||++.|++....               .+.++++.++..+.++.......+|..+..
T Consensus       173 ~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  243 (248)
T 2pnf_A          173 KELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHV  243 (248)
T ss_dssp             HHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcCCCcEEEe
Confidence            998  489999999999999875321               134678888887777764433444554443

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=5.7e-34  Score=251.28  Aligned_cols=223  Identities=22%  Similarity=0.226  Sum_probs=178.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+++.+..+++   +.   .+.++++|+++.++++++++++.+
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~D~~~~~~v~~~~~~~~~   82 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GN---NCVFAPADVTSEKDVQTALALAKG   82 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CT---TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CC---ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988877776665   22   288999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC----
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS----  158 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----  158 (298)
                      +++++|+||||||........+                 .....+.+.+.+++.+++|+.++++++++++|.|+++    
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~  145 (265)
T 2o23_A           83 KFGRVDVAVNCAGIAVASKTYN-----------------LKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQ  145 (265)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEE-----------------TTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCT
T ss_pred             HCCCCCEEEECCccCCCCcccc-----------------ccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccc
Confidence            9999999999999865432111                 0001124778899999999999999999999999876    


Q ss_pred             --CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHH
Q 022357          159 --DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI  236 (298)
Q Consensus       159 --~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~  236 (298)
                        +.++||++||..+..+.                                          +....|++||+|++.|+++
T Consensus       146 ~~~~~~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~  183 (265)
T 2o23_A          146 GGQRGVIINTASVAAFEGQ------------------------------------------VGQAAYSASKGGIVGMTLP  183 (265)
T ss_dssp             TSCCEEEEEECCTHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCChhhcCCC------------------------------------------CCCchhHHHHHHHHHHHHH
Confidence              56899999998765432                                          5578999999999999999


Q ss_pred             HHHhC--CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          237 LAKRY--PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       237 la~e~--~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      ++.++  .+|+||+|+||+|+|++....                .+.+|++.++..+.++..  ...+|..+..
T Consensus       184 la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~i~v  255 (265)
T 2o23_A          184 IARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN--PFLNGEVIRL  255 (265)
T ss_dssp             HHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEE
T ss_pred             HHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcCCCCCHHHHHHHHHHHhhc--CccCceEEEE
Confidence            99998  489999999999999975321                134788888888877743  2344444433

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.4e-34  Score=253.58  Aligned_cols=225  Identities=24%  Similarity=0.255  Sum_probs=179.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCC----CCcceeEEEeccCcHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGV----DPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      .+++|++|||||+||||++++++|+++|++|++++|+.+++++..+++...+.    ....+.++++|+++.++++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            47789999999999999999999999999999999998877776666544320    00238899999999999999999


Q ss_pred             HHHHhcCCc-cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc
Q 022357           79 FIKTQFGKL-DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL  157 (298)
Q Consensus        79 ~~~~~~g~i-d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  157 (298)
                      .+.+.++++ |+||||||.....+                       +.+.+.+.+++.+++|+.|+++++++++|.|++
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~  140 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQDEF-----------------------LLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVS  140 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCBC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCeEEEECCCcCCCcc-----------------------hhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHh
Confidence            999999999 99999999864321                       223577889999999999999999999999987


Q ss_pred             CC-CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHH
Q 022357          158 SD-SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI  236 (298)
Q Consensus       158 ~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~  236 (298)
                      ++ .|+||++||..+..+.                                          +....|++||+|++.|++.
T Consensus       141 ~~~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~  178 (264)
T 2pd6_A          141 NGCRGSIINISSIVGKVGN------------------------------------------VGQTNYAASKAGVIGLTQT  178 (264)
T ss_dssp             HTCCEEEEEECCTHHHHCC------------------------------------------TTBHHHHHHHHHHHHHHHH
T ss_pred             cCCCceEEEECChhhccCC------------------------------------------CCChhhHHHHHHHHHHHHH
Confidence            65 6899999998765432                                          5578999999999999999


Q ss_pred             HHHhC--CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          237 LAKRY--PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       237 la~e~--~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      ++.++  .+|+||+|+||++.|++....               .+.++++.++..+.++........|..+..
T Consensus       179 la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  251 (264)
T 2pd6_A          179 AARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEV  251 (264)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEE
Confidence            99998  589999999999999875321               123778888888777765444445555443

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=4.6e-34  Score=249.95  Aligned_cols=223  Identities=27%  Similarity=0.282  Sum_probs=182.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |.++++|++|||||+||||++++++|+++|++|++++|+.+.++...+++...    ..+.++++|+++.++++++++.+
T Consensus         1 ~~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~   76 (251)
T 1zk4_A            1 SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP----DQIQFFQHDSSDEDGWTKLFDAT   76 (251)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc----CceEEEECCCCCHHHHHHHHHHH
Confidence            46788999999999999999999999999999999999987777666665432    23889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||.....+                       +.+.+.+.|++.+++|+.+++++++.++|.|++++.
T Consensus        77 ~~~~~~id~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~  133 (251)
T 1zk4_A           77 EKAFGPVSTLVNNAGIAVNKS-----------------------VEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL  133 (251)
T ss_dssp             HHHHSSCCEEEECCCCCCCCC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS
T ss_pred             HHHhCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999764321                       123577889999999999999999999999987766


Q ss_pred             -CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          161 -PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       161 -g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                       ++||++||..+..+.                                          +....|++||++++.|+++++.
T Consensus       134 ~~~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~~a~  171 (251)
T 1zk4_A          134 GASIINMSSIEGFVGD------------------------------------------PSLGAYNASKGAVRIMSKSAAL  171 (251)
T ss_dssp             CEEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCchhccCC------------------------------------------CCCccchHHHHHHHHHHHHHHH
Confidence             899999998776443                                          5678999999999999999998


Q ss_pred             hC----CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          240 RY----PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       240 e~----~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      ++    .+|+||+|+||++.|++....                ...++++.++..+..+.......+|..+..
T Consensus       172 e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  244 (251)
T 1zk4_A          172 DCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVV  244 (251)
T ss_dssp             HHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccccCcEEEE
Confidence            85    489999999999999864321                134677888777777665444444554443

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1.4e-34  Score=252.73  Aligned_cols=222  Identities=25%  Similarity=0.333  Sum_probs=168.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++++|++|||||+||||++++++|+++|++|+++ .|+++.++...+++...+.+   +.++++|+++.++++++++.+.
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGIN---VVVAKGDVKNPEDVENMVKTAM   78 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCC---EEEEESCTTSHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCc---EEEEECCCCCHHHHHHHHHHHH
Confidence            4688999999999999999999999999999998 67777777777777665433   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +.++++|+||||||.....+                       +.+.+.+.+++.+++|+.++++++++++|.|++++.+
T Consensus        79 ~~~~~~d~vi~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~  135 (247)
T 2hq1_A           79 DAFGRIDILVNNAGITRDTL-----------------------MLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSG  135 (247)
T ss_dssp             HHHSCCCEEEECC--------------------------------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCE
T ss_pred             HhcCCCCEEEECCCCCCCCc-----------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc
Confidence            99999999999999764321                       1234667888999999999999999999999877778


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|++.|+++++.++
T Consensus       136 ~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~  173 (247)
T 2hq1_A          136 KIINITSIAGIIGN------------------------------------------AGQANYAASKAGLIGFTKSIAKEF  173 (247)
T ss_dssp             EEEEECC---------------------------------------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcChhhccCC------------------------------------------CCCcHhHHHHHHHHHHHHHHHHHH
Confidence            99999998765432                                          456889999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCC---------------CCCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 --PKFCVNCVCPGFVKTDINFH---------------AGILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~---------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                        .+|+||+|+||++.|++...               ....++++.++..+.++..+....+|..|..
T Consensus       174 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  241 (247)
T 2hq1_A          174 AAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVINI  241 (247)
T ss_dssp             GGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccccccCcEEEe
Confidence              48999999999999985322               1234788888887777665434444544433

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-34  Score=249.54  Aligned_cols=226  Identities=27%  Similarity=0.359  Sum_probs=175.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++|++|||||+||||++++++|+++|  ++|++++|+.++++.+.+ +  .   ...+.++++|+++.++++++++.+.+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~--~---~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I--K---DSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C--C---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c--c---CCceEEEEeecCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999  999999999887654422 1  1   22389999999999999999999999


Q ss_pred             hcC--CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC--
Q 022357           83 QFG--KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS--  158 (298)
Q Consensus        83 ~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--  158 (298)
                      .++  ++|+||||||...+..                      ++.+.+.+.+++.+++|+.+++.++++++|.|+++  
T Consensus        76 ~~g~~~id~li~~Ag~~~~~~----------------------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  133 (250)
T 1yo6_A           76 IVGSDGLSLLINNAGVLLSYG----------------------TNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAAS  133 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBC----------------------TTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHH
T ss_pred             hcCCCCCcEEEECCcccCCCc----------------------ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhccc
Confidence            998  9999999999865111                      12235778899999999999999999999999765  


Q ss_pred             ----C-----CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHH
Q 022357          159 ----D-----SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAV  229 (298)
Q Consensus       159 ----~-----~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a  229 (298)
                          +     .++||++||..+..+..+                                   .....+....|++||+|
T Consensus       134 ~~~~~~~~~~~~~iv~isS~~~~~~~~~-----------------------------------~~~~~~~~~~Y~~sK~a  178 (250)
T 1yo6_A          134 KESGDQLSVSRAAVITISSGLGSITDNT-----------------------------------SGSAQFPVLAYRMSKAA  178 (250)
T ss_dssp             SSCSSCCCTTTCEEEEECCGGGCSTTCC-----------------------------------STTSSSCBHHHHHHHHH
T ss_pred             ccCCCcccCCCcEEEEeccCccccCCcc-----------------------------------cccccCCccHHHHHHHH
Confidence                4     689999999887654210                                   00111456789999999


Q ss_pred             HHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          230 INAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       230 l~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      ++.|+++++.++  .+|+||+|+||+|+|++.......++++.++..+..+.......+|.++..+
T Consensus       179 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~  244 (250)
T 1yo6_A          179 INMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNGRFFMRN  244 (250)
T ss_dssp             HHHHHHHHHHHTGGGTCEEEEEECCCC-------------HHHHHHHHHHHTTCCGGGTTCEEETT
T ss_pred             HHHHHHHHHHHhccCCeEEEEEcCCceecCCCCCCCCCCHHHHHHHHHHHHhcccccCCCeEEEEC
Confidence            999999999999  4899999999999999987667789999999999999876655677777654

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=8.8e-34  Score=250.51  Aligned_cols=226  Identities=23%  Similarity=0.307  Sum_probs=187.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCC---CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKG---ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G---~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      .+++|++|||||+||||++++++|+++|   ++|++++|+.++.+.+ +++...+.   ++.++.+|+++.++++++++.
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~---~~~~~~~Dl~~~~~v~~~~~~   93 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHS---NIHILEIDLRNFDAYDKLVAD   93 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCT---TEEEEECCTTCGGGHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCC---ceEEEEecCCChHHHHHHHHH
Confidence            3578999999999999999999999999   9999999998766543 44443332   389999999999999999999


Q ss_pred             HHHhcC--CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc
Q 022357           80 IKTQFG--KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL  157 (298)
Q Consensus        80 ~~~~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  157 (298)
                      +.+.++  ++|+||||||.....                      .++.+.+.+.+++.+++|+.+++.++++++|.|++
T Consensus        94 ~~~~~g~~~id~li~~Ag~~~~~----------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~  151 (267)
T 1sny_A           94 IEGVTKDQGLNVLFNNAGIAPKS----------------------ARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKK  151 (267)
T ss_dssp             HHHHHGGGCCSEEEECCCCCCCC----------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCccEEEECCCcCCCc----------------------cccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhh
Confidence            999998  899999999986521                      11223577899999999999999999999999976


Q ss_pred             C------C-----CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhH
Q 022357          158 S------D-----SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVS  226 (298)
Q Consensus       158 ~------~-----~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  226 (298)
                      +      +     .++||++||..+..+.                                       ...+....|++|
T Consensus       152 ~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------------------------------~~~~~~~~Y~~s  192 (267)
T 1sny_A          152 AAKANESQPMGVGRAAIINMSSILGSIQG---------------------------------------NTDGGMYAYRTS  192 (267)
T ss_dssp             HHHHTTTSCSSTTTCEEEEECCGGGCSTT---------------------------------------CCSCCCHHHHHH
T ss_pred             cccccccccccCCCceEEEEecccccccC---------------------------------------CCCCCchHHHHH
Confidence            5      3     5899999998776432                                       011356789999


Q ss_pred             HHHHHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          227 KAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       227 K~al~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      |+|++.|++.++.++  .+|+||+|+||+|+|++.......++++.++..+..+.......+|.++...
T Consensus       193 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~  261 (267)
T 1sny_A          193 KSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYD  261 (267)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCSBCHHHHHHHHHHHHHHCCGGGTTCEECTT
T ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCCCCCCCHHHHHHHHHHHHHhcCcCCCCcEEccC
Confidence            999999999999998  4899999999999999987777889999999999998876666777777644

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=2.5e-35  Score=257.00  Aligned_cols=212  Identities=23%  Similarity=0.257  Sum_probs=171.6

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +|++|||||++|||++++++|+++|++|++++|+.++   ..+++   +     +.++++|+++ ++++++++.+.+.++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~-----~~~~~~D~~~-~~~~~~~~~~~~~~g   69 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G-----AVPLPTDLEK-DDPKGLVKRALEALG   69 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T-----CEEEECCTTT-SCHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C-----cEEEecCCch-HHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999999999765   22333   1     6788999999 999999999999999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|+||||||.....+                       +.+.+.++|++.+++|+.++++++++++|.|++++.|+||+
T Consensus        70 ~id~lv~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~  126 (239)
T 2ekp_A           70 GLHVLVHAAAVNVRKP-----------------------ALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLF  126 (239)
T ss_dssp             SCCEEEECCCCCCCCC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            9999999999864322                       22357889999999999999999999999998777799999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK  243 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~  243 (298)
                      +||..+..+.                                        .++....|++||+|++.|+++++.|+  .+
T Consensus       127 isS~~~~~~~----------------------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g  166 (239)
T 2ekp_A          127 IGSVTTFTAG----------------------------------------GPVPIPAYTTAKTALLGLTRALAKEWARLG  166 (239)
T ss_dssp             ECCGGGTSCC----------------------------------------TTSCCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             ECchhhccCC----------------------------------------CCCCCccHHHHHHHHHHHHHHHHHHhhhcC
Confidence            9998776432                                        11457899999999999999999998  48


Q ss_pred             cEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          244 FCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      |+||+|+||++.|++....                 .+.+|++.++..+.++.......+|..+..
T Consensus       167 i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~v  232 (239)
T 2ekp_A          167 IRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAV  232 (239)
T ss_dssp             EEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             cEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEE
Confidence            9999999999999974310                 124677777776666654334444554443

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=2.2e-34  Score=249.47  Aligned_cols=212  Identities=17%  Similarity=0.146  Sum_probs=168.7

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.   ++.++.+|+++.++++++++++.+   .
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~D~~~~~~v~~~~~~~~~---~   72 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SN---NVGYRARDLASHQEVEQLFEQLDS---I   72 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SS---CCCEEECCTTCHHHHHHHHHSCSS---C
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hh---ccCeEeecCCCHHHHHHHHHHHhh---c
Confidence            68999999999999999999999999999999988777666554   22   388999999999999998876643   3


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+||||||.....                       ++.+.+.+.|++.+++|+.|+++++++++|.|++++ ++||++
T Consensus        73 ~d~lv~~Ag~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~i  128 (230)
T 3guy_A           73 PSTVVHSAGSGYFG-----------------------LLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMI  128 (230)
T ss_dssp             CSEEEECCCCCCCS-----------------------CGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEE
T ss_pred             CCEEEEeCCcCCCC-----------------------ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEE
Confidence            49999999976543                       223468899999999999999999999999998765 499999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CCc
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKF  244 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~i  244 (298)
                      ||..+..+.                                          +....|++||+|+++|+++++.|+  .+|
T Consensus       129 sS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi  166 (230)
T 3guy_A          129 MSTAAQQPK------------------------------------------AQESTYCAVKWAVKGLIESVRLELKGKPM  166 (230)
T ss_dssp             CCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSSC
T ss_pred             eecccCCCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHHhcCe
Confidence            998876543                                          667899999999999999999999  489


Q ss_pred             EEEEeeCCeeecCCCCCC-------CCCChhhhhhhhhhhhccCC-CCCcceEeccC
Q 022357          245 CVNCVCPGFVKTDINFHA-------GILSVEEGAESPVKLALLPD-GGPTGRFFLRK  293 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~~-------~~~~~~~~a~~~~~~~~~~~-~~~~~~~~l~~  293 (298)
                      +||+|+||+|+|++....       ...+|++.++..+.++..+. ...+|..+...
T Consensus       167 ~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~~  223 (230)
T 3guy_A          167 KIIAVYPGGMATEFWETSGKSLDTSSFMSAEDAALMIHGALANIGNGYVSDITVNRE  223 (230)
T ss_dssp             EEEEEEECCC----------------CCCHHHHHHHHHHHCCEETTEEEEEEEEEC-
T ss_pred             EEEEEECCcccChHHHhcCCCCCcccCCCHHHHHHHHHHHHhCcCCCCccceeecCC
Confidence            999999999999986542       35789999999988876443 34555555443

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=8.1e-34  Score=248.77  Aligned_cols=221  Identities=23%  Similarity=0.279  Sum_probs=182.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++.+|++|||||+||||++++++|+++|++|++++|+.+.++...+++...+..   +.++.+|+++.++++++++.+.+
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~   84 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ---AFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCc---eEEEEcCCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999988888877787765443   88899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||.....+.                        +.+.+++++.+++|+.++++++++++|.|++++.++
T Consensus        85 ~~~~~d~vi~~Ag~~~~~~~------------------------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~  140 (255)
T 1fmc_A           85 KLGKVDILVNNAGGGGPKPF------------------------DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGV  140 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCT------------------------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             hcCCCCEEEECCCCCCCCCC------------------------CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcE
Confidence            99999999999998643211                        246788999999999999999999999998777789


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||++++.|++.++.++ 
T Consensus       141 iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~  178 (255)
T 1fmc_A          141 ILTITSMAAENKN------------------------------------------INMTSYASSKAAASHLVRNMAFDLG  178 (255)
T ss_dssp             EEEECCGGGTCCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcchhhcCCC------------------------------------------CCCcccHHHHHHHHHHHHHHHHHhh
Confidence            9999998765432                                          557889999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                       .+|++|+|+||++.|++....                .+.++++.++..+..+.......+|..|..
T Consensus       179 ~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  246 (255)
T 1fmc_A          179 EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTV  246 (255)
T ss_dssp             TTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCccccCCCcEEEE
Confidence             599999999999999753211                134778888887777754433344544433

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1.5e-33  Score=250.34  Aligned_cols=223  Identities=22%  Similarity=0.265  Sum_probs=182.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||+||||++++++|+++|++|++++|+.+......+++...    ..+.++++|+++.++++++++.+.+
T Consensus        13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~   88 (278)
T 2bgk_A           13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP----DVISFVHCDVTKDEDVRNLVDTTIA   88 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC----CceEEEECCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999987766666555321    1388999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||......                     .++.+.+.+.+++.+++|+.++++++++++|.|++++.|+
T Consensus        89 ~~~~id~li~~Ag~~~~~~---------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  147 (278)
T 2bgk_A           89 KHGKLDIMFGNVGVLSTTP---------------------YSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGS  147 (278)
T ss_dssp             HHSCCCEEEECCCCCCSSC---------------------SSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEE
T ss_pred             HcCCCCEEEECCcccCCCC---------------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCe
Confidence            9999999999999764210                     1122357788999999999999999999999998777799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCC-CCchhhhHHHHHHHHHHHHHHhC
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCP-HSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      ||++||..+..+.                                          + ....|++||++++.|++.++.++
T Consensus       148 iv~isS~~~~~~~------------------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~  185 (278)
T 2bgk_A          148 IVFTASISSFTAG------------------------------------------EGVSHVYTATKHAVLGLTTSLCTEL  185 (278)
T ss_dssp             EEEECCGGGTCCC------------------------------------------TTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeeccccCCC------------------------------------------CCCCcchHHHHHHHHHHHHHHHHHH
Confidence            9999998776432                                          3 56789999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC--------------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA--------------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~--------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                        .+|+||+|+||+|.|++....                    .+.++++.++..+.++.......+|..+..
T Consensus       186 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  258 (278)
T 2bgk_A          186 GEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVI  258 (278)
T ss_dssp             GGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCcccccCCCCEEEE
Confidence              589999999999999975321                    145788888888887765444445555443

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-33  Score=251.89  Aligned_cols=225  Identities=23%  Similarity=0.267  Sum_probs=184.4

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+++|++|||||+||||++++++|+++|++|++++|+.++++...++++..+.. ..+.++++|+++.++++++++.+
T Consensus        27 m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~  105 (279)
T 1xg5_A           27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP-GTLIPYRCDLSNEEDILSMFSAI  105 (279)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCC-ceEEEEEecCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999998888888888765421 23788999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||.....+                       +.+.+.+.|++.+++|+.+++.+++.++|.|++++.
T Consensus       106 ~~~~g~iD~vi~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~  162 (279)
T 1xg5_A          106 RSQHSGVDICINNAGLARPDT-----------------------LLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV  162 (279)
T ss_dssp             HHHHCCCSEEEECCCCCCCCC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred             HHhCCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999764332                       123577889999999999999999999999987653


Q ss_pred             --CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          161 --PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       161 --g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                        |+||++||..+...                                        .+.+....|++||+|++.|++.++
T Consensus       163 ~~g~iv~isS~~~~~~----------------------------------------~~~~~~~~Y~~sK~a~~~~~~~la  202 (279)
T 1xg5_A          163 DDGHIININSMSGHRV----------------------------------------LPLSVTHFYSATKYAVTALTEGLR  202 (279)
T ss_dssp             CSCEEEEECCGGGTSC----------------------------------------CSCGGGHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEcChhhccc----------------------------------------CCCCCCchhHHHHHHHHHHHHHHH
Confidence              89999999876521                                        111446789999999999999999


Q ss_pred             HhC----CCcEEEEeeCCeeecCCCCC---------------CCCCChhhhhhhhhhhhccCCCCCcceE
Q 022357          239 KRY----PKFCVNCVCPGFVKTDINFH---------------AGILSVEEGAESPVKLALLPDGGPTGRF  289 (298)
Q Consensus       239 ~e~----~~i~vn~v~PG~v~t~~~~~---------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~  289 (298)
                      .++    .+|+||+|+||+|.|++...               ....++++.++..+.++..+.....+.+
T Consensus       203 ~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~~~~~~~~g~i  272 (279)
T 1xg5_A          203 QELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQIGDI  272 (279)
T ss_dssp             HHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTTEEEEEE
T ss_pred             HHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCHHHHHHHHHHHhcCCcceEeeeE
Confidence            996    48999999999999987311               1245788888888888776655444443

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=8.1e-34  Score=248.81  Aligned_cols=219  Identities=24%  Similarity=0.278  Sum_probs=180.3

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcce-eEEEeccCcHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL-LFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dls~~~~v~~~~~~~   80 (298)
                      +.+++|++|||||+||||++++++|+++|++|++++|+.++++...+++..      .+ .++++|+++.++++++++.+
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~   80 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGA------AVAARIVADVTDAEAMTAAAAEA   80 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc------cceeEEEEecCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999998877776666521      25 88999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+ ++++|+||||||.....+.                       .+.+.+.+++.+++|+.++++++++++|.|++++.
T Consensus        81 ~~-~~~id~li~~Ag~~~~~~~-----------------------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  136 (254)
T 2wsb_A           81 EA-VAPVSILVNSAGIARLHDA-----------------------LETDDATWRQVMAVNVDGMFWASRAFGRAMVARGA  136 (254)
T ss_dssp             HH-HSCCCEEEECCCCCCCBCS-----------------------TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             Hh-hCCCcEEEECCccCCCCCc-----------------------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            88 8999999999998654321                       23477889999999999999999999999987777


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCC--chhhhHHHHHHHHHHHHH
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHS--SAYKVSKAVINAYTRILA  238 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~al~~l~~~la  238 (298)
                      ++||++||..+..+.                                          +..  ..|++||+|++.++++++
T Consensus       137 ~~iv~isS~~~~~~~------------------------------------------~~~~~~~Y~~sK~a~~~~~~~~~  174 (254)
T 2wsb_A          137 GAIVNLGSMSGTIVN------------------------------------------RPQFASSYMASKGAVHQLTRALA  174 (254)
T ss_dssp             EEEEEECCGGGTSCC------------------------------------------SSSCBHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEecchhccCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHH
Confidence            999999998776432                                          334  789999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCC-----------------CCCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFH-----------------AGILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~-----------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      .++  .+|++|+|+||++.|++...                 ....++++.++..+.++.......+|..+..
T Consensus       175 ~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  247 (254)
T 2wsb_A          175 AEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGAILAV  247 (254)
T ss_dssp             HHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccccccCCEEEE
Confidence            998  48999999999999986421                 1235788888888887765444445555543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.9e-34  Score=281.22  Aligned_cols=216  Identities=22%  Similarity=0.263  Sum_probs=175.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||++|||+++|++|+++|++|++.+|.  .+++..+++...+..   +..+.+|++  .+++++++.+.+
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~g~~---~~~~~~Dv~--~~~~~~~~~~~~  391 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAGGE---AWPDQHDVA--KDSEAIIKNVID  391 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHTTCE---EEEECCCHH--HHHHHHHHHHHH
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhcCCe---EEEEEcChH--HHHHHHHHHHHH
Confidence            4678999999999999999999999999999999874  345666777665432   677888884  456788889999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|+||+||||||+....                       ++.+.+.++|++.+++|+.|+|+++++++|+|++++.|+
T Consensus       392 ~~G~iDiLVnNAGi~~~~-----------------------~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~  448 (604)
T 2et6_A          392 KYGTIDILVNNAGILRDR-----------------------SFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGR  448 (604)
T ss_dssp             HHSCCCEEEECCCCCCCB-----------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEE
T ss_pred             hcCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCE
Confidence            999999999999986432                       223468899999999999999999999999998877899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|++||+|+.+|+++|+.|+ 
T Consensus       449 IVnisS~ag~~~~------------------------------------------~~~~~Y~asKaal~~lt~~la~El~  486 (604)
T 2et6_A          449 IINITSTSGIYGN------------------------------------------FGQANYSSSKAGILGLSKTMAIEGA  486 (604)
T ss_dssp             EEEECCHHHHSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEECChhhccCC------------------------------------------CCChhHHHHHHHHHHHHHHHHHHhC
Confidence            9999998876543                                          667899999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                       .|||||+|+||+ .|+|....      ...+|++.+...++++..... .+|..+..
T Consensus       487 ~~gIrVn~v~PG~-~T~m~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~-itG~~~~v  542 (604)
T 2et6_A          487 KNNIKVNIVAPHA-ETAMTLSIMREQDKNLYHADQVAPLLVYLGTDDVP-VTGETFEI  542 (604)
T ss_dssp             GGTEEEEEEEECC-CCCC---------CCSSCGGGTHHHHHHTTSTTCC-CCSCEEEE
T ss_pred             ccCeEEEEEcCCC-CCccccccCchhhccCCCHHHHHHHHHHHhCCccC-CCCcEEEE
Confidence             599999999996 99886431      235788888888777765444 55555543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=8.4e-35  Score=256.45  Aligned_cols=226  Identities=26%  Similarity=0.262  Sum_probs=177.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++|++|||||+||||++++++|+++|++|++++|+..+.....+++......  .+.++++|+++.++++++++.+.+
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~   88 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV--KTKAYQCDVSNTDIVTKTIQQIDA   88 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCC--eeEEEEeeCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999877666666666532221  288999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-CC
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SP  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g  161 (298)
                      .++++|+||||||.....+                       +.+.+.+.+++.+++|+.++++++++++|.|.+++ .+
T Consensus        89 ~~~~id~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~  145 (265)
T 1h5q_A           89 DLGPISGLIANAGVSVVKP-----------------------ATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKG  145 (265)
T ss_dssp             HSCSEEEEEECCCCCCCSC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred             hcCCCCEEEECCCcCCCCc-----------------------hhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCc
Confidence            9999999999999864331                       22357788999999999999999999999997654 48


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+...                                   ..........|++||+|++.|+++++.++
T Consensus       146 ~iv~~sS~~~~~~~~~-----------------------------------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~  190 (265)
T 1h5q_A          146 SIVVTSSMSSQIINQS-----------------------------------SLNGSLTQVFYNSSKAACSNLVKGLAAEW  190 (265)
T ss_dssp             EEEEECCGGGTSCCEE-----------------------------------ETTEECSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEeCCchhhccccc-----------------------------------cccccccccccHHHHHHHHHHHHHHHHHH
Confidence            9999999877543210                                   00011236789999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcce
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGR  288 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~  288 (298)
                        .+|+||+|+||+|.|++....               .+.++++.++..+.++..+....+|.
T Consensus       191 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  254 (265)
T 1h5q_A          191 ASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATYMTGG  254 (265)
T ss_dssp             GGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred             HhcCcEEEEEecCccccccccccchhHHHHHHhcCcccCCCCHHHHHHHHHhhccCchhcCcCc
Confidence              489999999999999975432               12366666666666665433333333

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=3.5e-34  Score=251.34  Aligned_cols=212  Identities=24%  Similarity=0.276  Sum_probs=175.9

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |+++++|++|||||+||||++++++|+++|++|++++|+ .++++...++++..+.   .+.++++|+++.+++++++++
T Consensus         2 ~~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~   78 (258)
T 3afn_B            2 FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG---DAAFFAADLATSEACQQLVDE   78 (258)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTC---EEEEEECCTTSHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCC---ceEEEECCCCCHHHHHHHHHH
Confidence            456789999999999999999999999999999999999 7778877777776543   388999999999999999999


Q ss_pred             HHHhcCCccEEEEcccc-CCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           80 IKTQFGKLDILANNAGI-ASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                      +.+.++++|+||||||. ....                       ++.+.+.+.+++.+++|+.+++.++++++|.|+++
T Consensus        79 ~~~~~g~id~vi~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  135 (258)
T 3afn_B           79 FVAKFGGIDVLINNAGGLVGRK-----------------------PLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAA  135 (258)
T ss_dssp             HHHHHSSCSEEEECCCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCEEEECCCCcCCcC-----------------------ccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc
Confidence            99999999999999997 3221                       12235778899999999999999999999999754


Q ss_pred             C--C---CcEEEEccCcccc-cCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHH
Q 022357          159 D--S---PRLVNLSSYVSAL-KDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINA  232 (298)
Q Consensus       159 ~--~---g~iv~vsS~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~  232 (298)
                      +  .   ++||++||..+.. +.                                          +....|++||++++.
T Consensus       136 ~~~~~~~~~iv~~sS~~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~  173 (258)
T 3afn_B          136 AKASGQTSAVISTGSIAGHTGGG------------------------------------------PGAGLYGAAKAFLHN  173 (258)
T ss_dssp             HHHHTSCEEEEEECCTHHHHCCC------------------------------------------TTCHHHHHHHHHHHH
T ss_pred             ccCCCCCcEEEEecchhhccCCC------------------------------------------CCchHHHHHHHHHHH
Confidence            3  3   8999999977653 22                                          557899999999999


Q ss_pred             HHHHHHHhC--CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhcc
Q 022357          233 YTRILAKRY--PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALL  280 (298)
Q Consensus       233 l~~~la~e~--~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~  280 (298)
                      |++.++.++  .+|+||+|+||++.|++....               ...++++.++..+..+..
T Consensus       174 ~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  238 (258)
T 3afn_B          174 VHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFASH  238 (258)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCH
T ss_pred             HHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCc
Confidence            999999998  489999999999999875431               134667777766666543

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=4.2e-34  Score=257.11  Aligned_cols=220  Identities=19%  Similarity=0.127  Sum_probs=177.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhc-CCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS-GVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++++|++|||||+||||++++++|+++|++|++++|+.+++.+..+++... +.   ++.++++|+++.++++++++.+.
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN---KVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS---CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC---ceEEEEeCCCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998888877777654 32   28899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhc-cCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE-LSDS  160 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~  160 (298)
                      +.++++|+||||||.....+                       +.+.+.+.+++.+++|+.+++.++++++|.|+ +++.
T Consensus       100 ~~~g~id~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~  156 (302)
T 1w6u_A          100 KVAGHPNIVINNAAGNFISP-----------------------TERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKG  156 (302)
T ss_dssp             HHTCSCSEEEECCCCCCCSC-----------------------GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHcCCCCEEEECCCCCCCCc-----------------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999764321                       22357788999999999999999999999997 4456


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+..+.                                          +....|++||+|++.|+++++.+
T Consensus       157 ~~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~~  194 (302)
T 1w6u_A          157 AAFLSITTIYAETGS------------------------------------------GFVVPSASAKAGVEAMSKSLAAE  194 (302)
T ss_dssp             EEEEEECCTHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEcccccccCC------------------------------------------CCcchhHHHHHHHHHHHHHHHHH
Confidence            899999998765432                                          55788999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecC-CCCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          241 Y--PKFCVNCVCPGFVKTD-INFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~-~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      +  .+|+||+|+||++.|+ +....                 ...++++.++..+.++.......+|..+
T Consensus       195 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  264 (302)
T 1w6u_A          195 WGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVI  264 (302)
T ss_dssp             HGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             hhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcccccCCCEE
Confidence            8  5899999999999997 32211                 1236777777777666543333344444

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=6.6e-34  Score=247.93  Aligned_cols=219  Identities=26%  Similarity=0.331  Sum_probs=180.0

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +|++|||||+||||++++++|+++|++|+++ +|+.+..+...++++..+.   .+.++++|+++.++++++++.+.+.+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG---QAITFGGDVSKEADVEAMMKTAIDAW   77 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC---EEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC---cEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999985 7888777777777765443   38889999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      +++|+||||||.....+                       +.+.+.+.+++.+++|+.++++++++++|.|++++.++||
T Consensus        78 g~id~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv  134 (244)
T 1edo_A           78 GTIDVVVNNAGITRDTL-----------------------LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRII  134 (244)
T ss_dssp             SCCSEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCCCEEEECCCCCCCcC-----------------------cccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEE
Confidence            99999999999865321                       1235778899999999999999999999999877779999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||..+..+.                                          +....|++||++++.|++.++.++  .
T Consensus       135 ~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~  172 (244)
T 1edo_A          135 NIASVVGLIGN------------------------------------------IGQANYAAAKAGVIGFSKTAAREGASR  172 (244)
T ss_dssp             EECCTHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EECChhhcCCC------------------------------------------CCCccchhhHHHHHHHHHHHHHHhhhc
Confidence            99998765432                                          557889999999999999999998  5


Q ss_pred             CcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCC-CCCcceEecc
Q 022357          243 KFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPD-GGPTGRFFLR  292 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~-~~~~~~~~l~  292 (298)
                      +|+||+|+||++.|++....               ...+|++.++..+.++..+. ...+|..+..
T Consensus       173 gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v  238 (244)
T 1edo_A          173 NINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTI  238 (244)
T ss_dssp             TEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEE
T ss_pred             CCEEEEEeeCccccchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEe
Confidence            89999999999999864321               13478888888877774332 2334555443

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.9e-35  Score=260.15  Aligned_cols=212  Identities=17%  Similarity=0.097  Sum_probs=172.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      |++|||||++|||++++++|+++|++|++++|+.++++...+ +...+.+   +..+     +.++++++++.+.+.+++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~---~~~~-----d~~~v~~~~~~~~~~~g~   72 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQ---LKPM-----SEQEPAELIEAVTSAYGQ   72 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTT---SEEC-----CCCSHHHHHHHHHHHHSC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCc---EEEE-----CHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999887766655 6554433   3332     677888999999999999


Q ss_pred             ccEEEEccccC-CcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           87 LDILANNAGIA-SVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        87 id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      +|+||||||.. ...                       ++.+.+.++|++.+++|+.++++++++++|.|++++.|+||+
T Consensus        73 iD~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~  129 (254)
T 1zmt_A           73 VDVLVSNDIFAPEFQ-----------------------PIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIF  129 (254)
T ss_dssp             CCEEEEECCCCCCCC-----------------------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             CCEEEECCCcCCCCC-----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence            99999999986 322                       122357889999999999999999999999998777799999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK  243 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~  243 (298)
                      +||..+..+.                                          +....|++||+|+++|+++++.|+  .+
T Consensus       130 isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~g  167 (254)
T 1zmt_A          130 ITSATPFGPW------------------------------------------KELSTYTSARAGACTLANALSKELGEYN  167 (254)
T ss_dssp             ECCSTTTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             ECCcccccCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhcC
Confidence            9998876543                                          567899999999999999999998  48


Q ss_pred             cEEEEeeCCee---------ecCCCCCC--------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          244 FCVNCVCPGFV---------KTDINFHA--------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       244 i~vn~v~PG~v---------~t~~~~~~--------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      |+||+|+||+|         +|++....              ...+|++.++..+.++.......+|..+..
T Consensus       168 i~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~v  239 (254)
T 1zmt_A          168 IPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWL  239 (254)
T ss_dssp             CCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEE
T ss_pred             cEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEE
Confidence            99999999999         88764321              134788888888877765544455555544

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=2.4e-34  Score=251.02  Aligned_cols=211  Identities=12%  Similarity=0.051  Sum_probs=174.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +.++|++|||||++|||++++++|+++|++|++++|++++...             ...++++|+++.++++++++++.+
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~~D~~~~~~v~~~~~~~~~   70 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-------------ASVIVKMTDSFTEQADQVTAEVGK   70 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS-------------EEEECCCCSCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC-------------CcEEEEcCCCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999764320             256789999999999999999999


Q ss_pred             hc--CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           83 QF--GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        83 ~~--g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+  +++|+||||||.....+..                      .+.+.+.+++.+++|+.+++.++++++|.|++  .
T Consensus        71 ~~~~g~iD~lv~~Ag~~~~~~~~----------------------~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~  126 (241)
T 1dhr_A           71 LLGDQKVDAILCVAGGWAGGNAK----------------------SKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--G  126 (241)
T ss_dssp             HHTTCCEEEEEECCCCCCCBCTT----------------------CTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--E
T ss_pred             HhCCCCCCEEEEcccccCCCCCc----------------------ccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--C
Confidence            99  7999999999986433210                      12577889999999999999999999999975  4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|++.|+++++.|
T Consensus       127 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e  164 (241)
T 1dhr_A          127 GLLTLAGAKAALDGT------------------------------------------PGMIGYGMAKGAVHQLCQSLAGK  164 (241)
T ss_dssp             EEEEEECCGGGGSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHTST
T ss_pred             CEEEEECCHHHccCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHH
Confidence            899999998876443                                          56789999999999999999999


Q ss_pred             CC----CcEEEEeeCCeeecCCCCC-------CCCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          241 YP----KFCVNCVCPGFVKTDINFH-------AGILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       241 ~~----~i~vn~v~PG~v~t~~~~~-------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +.    +|+||+|+||+|+|++...       ....++++.++..+..+.......+|.++..
T Consensus       165 ~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v  227 (241)
T 1dhr_A          165 NSGMPSGAAAIAVLPVTLDTPMNRKSMPEADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQV  227 (241)
T ss_dssp             TSSCCTTCEEEEEEESCEECHHHHHHSTTSCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred             hccCCCCeEEEEEecCcccCccccccCcchhhccCCCHHHHHHHHHHHhcCCCcCccceEEEE
Confidence            73    7999999999999987532       1235778999998888876555566666654

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=5.7e-35  Score=271.59  Aligned_cols=245  Identities=16%  Similarity=0.033  Sum_probs=180.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHH-CCCEEEEEecCchhhH------------HHHHHHHhcCCCCcceeEEEeccCcHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLAS-KGITVVLTARDEKRGL------------EAVEKLKASGVDPELLLFHQLDISDLA   71 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~-~G~~Vii~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~~~Dls~~~   71 (298)
                      .+|++|||||++|||+++|+.|++ +|++|++++|+.+.++            .+.+.++..+..   ...+++|+++.+
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~---a~~i~~Dvtd~~  136 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLY---SKSINGDAFSDA  136 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCC---EEEEESCTTSHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCc---EEEEEecCCCHH
Confidence            479999999999999999999999 9999999999866432            233555555543   888999999999


Q ss_pred             HHHHHHHHHHHhc-CCccEEEEccccCCcccccccc------cccc---cccccCccccchhhh--hhhhHHHHHhhhhh
Q 022357           72 SVSSLADFIKTQF-GKLDILANNAGIASVKFDMDAF------ADSG---YQITKGDAEVDWSKV--CYQTYELAVECLKT  139 (298)
Q Consensus        72 ~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  139 (298)
                      +++++++.+.+++ |+||+||||||......+...+      ....   ...+.+.....|...  .+.+.++|+..+++
T Consensus       137 ~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~V  216 (422)
T 3s8m_A          137 ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITV  216 (422)
T ss_dssp             HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHh
Confidence            9999999999999 9999999999973211000000      0000   000011112233322  34688999999999


Q ss_pred             hceeHH-HHHHHHhh-hhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCC
Q 022357          140 NYYGTK-QTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC  217 (298)
Q Consensus       140 N~~~~~-~l~~~~~~-~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (298)
                      |..+.| .+++++.+ .|.+ ++|+||++||+.+..+.                                          
T Consensus       217 n~~~~~~~~~~a~~~~~m~~-~gG~IVniSSi~g~~~~------------------------------------------  253 (422)
T 3s8m_A          217 MGGQDWELWIDALEGAGVLA-DGARSVAFSYIGTEITW------------------------------------------  253 (422)
T ss_dssp             HSSHHHHHHHHHHHHTTCEE-EEEEEEEEEECCCGGGH------------------------------------------
T ss_pred             hchhHHHHHHHHHHHHHHhh-CCCEEEEEeCchhhccC------------------------------------------
Confidence            999998 78888765 4443 45899999999886542                                          


Q ss_pred             CC--CchhhhHHHHHHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCCCCCCCh-hhhhhhhhhhhccCCCCCcceEecc
Q 022357          218 PH--SSAYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAGILSV-EEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       218 ~~--~~~Y~~sK~al~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~-~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +.  ..+|++||+|+.+|+|+||.|+  .|||||+|+||+|.|++....+.... ......|+++...|++.+....||.
T Consensus       254 p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~  333 (422)
T 3s8m_A          254 PIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLF  333 (422)
T ss_dssp             HHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHh
Confidence            22  3789999999999999999999  59999999999999998765432111 1122447888888888888887777


Q ss_pred             Ccc
Q 022357          293 KEE  295 (298)
Q Consensus       293 ~~~  295 (298)
                      ++.
T Consensus       334 sd~  336 (422)
T 3s8m_A          334 RER  336 (422)
T ss_dssp             HHT
T ss_pred             cch
Confidence            664

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=3e-34  Score=251.00  Aligned_cols=213  Identities=16%  Similarity=0.058  Sum_probs=168.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEE-e--cCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLT-A--RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +|++|||||++|||++++++|+++|++|+++ +  |+.++++...+++  .+          +|+.+.++++++++.+.+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~----------~~~~~~~~v~~~~~~~~~   68 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG----------TIALAEQKPERLVDATLQ   68 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT----------EEECCCCCGGGHHHHHGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC----------CcccCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999 6  9987776666554  11          233377788889999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||......                    +.++.+.+.++|++.+++|+.++++++++++|.|++++.|+
T Consensus        69 ~~g~iD~lv~~Ag~~~~~~--------------------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~  128 (244)
T 1zmo_A           69 HGEAIDTIVSNDYIPRPMN--------------------RLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGAS  128 (244)
T ss_dssp             GSSCEEEEEECCCCCTTGG--------------------GCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEE
T ss_pred             HcCCCCEEEECCCcCCCCC--------------------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcE
Confidence            9999999999999864300                    01222357889999999999999999999999998877899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.|+ 
T Consensus       129 iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~  166 (244)
T 1zmo_A          129 VIFITSSVGKKPL------------------------------------------AYNPLYGPARAATVALVESAAKTLS  166 (244)
T ss_dssp             EEEECCGGGTSCC------------------------------------------TTCTTHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEECChhhCCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHHh
Confidence            9999998876543                                          567899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCC---CC--------------C---CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 -PKFCVNCVCPGFVKTDIN---FH--------------A---GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~---~~--------------~---~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                       .+|+||+|+||+|+|++.   ..              .   ...+|++.++..+.++.......+|..+..
T Consensus       167 ~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~v  238 (244)
T 1zmo_A          167 RDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAF  238 (244)
T ss_dssp             GGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEE
T ss_pred             hcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEe
Confidence             489999999999999986   21              1   123667777776666654444445555443

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=6.7e-34  Score=245.41  Aligned_cols=198  Identities=26%  Similarity=0.228  Sum_probs=161.4

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+.+.+|++|||||++|||+++|++|+++|++|++++|+.+                       +|+++.++++++++++
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----------------------~D~~~~~~v~~~~~~~   57 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-----------------------LDISDEKSVYHYFETI   57 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-----------------------CCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-----------------------cCCCCHHHHHHHHHHh
Confidence            78889999999999999999999999999999999999864                       8999999999888754


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                          +++|+||||||......                      ++.+.+.+.|++.+++|+.++++++++++|.|++  .
T Consensus        58 ----g~id~lv~nAg~~~~~~----------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~  109 (223)
T 3uce_A           58 ----GAFDHLIVTAGSYAPAG----------------------KVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--G  109 (223)
T ss_dssp             ----CSEEEEEECCCCCCCCS----------------------CTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--E
T ss_pred             ----CCCCEEEECCCCCCCCC----------------------CcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--C
Confidence                89999999999863221                      2234688999999999999999999999999975  4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|+++|+++++.|
T Consensus       110 g~iv~~sS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e  147 (223)
T 3uce_A          110 GSITLTSGMLSRKVV------------------------------------------ANTYVKAAINAAIEATTKVLAKE  147 (223)
T ss_dssp             EEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEecchhhccCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHh
Confidence            899999998876543                                          66789999999999999999999


Q ss_pred             CCCcEEEEeeCCeeecCCCCCC-------------------CCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          241 YPKFCVNCVCPGFVKTDINFHA-------------------GILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       241 ~~~i~vn~v~PG~v~t~~~~~~-------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +.+|+||+|+||+|+|++....                   ...+|++.++..+..+..  ...+|..+..+
T Consensus       148 ~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~--~~~tG~~i~vd  217 (223)
T 3uce_A          148 LAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQN--SYMTGTVIDVD  217 (223)
T ss_dssp             HTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHC--TTCCSCEEEES
T ss_pred             hcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccC--CCCCCcEEEec
Confidence            9669999999999999976432                   123778888777777652  33455555443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=3.1e-34  Score=281.01  Aligned_cols=216  Identities=20%  Similarity=0.232  Sum_probs=177.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc---------hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE---------KRGLEAVEKLKASGVDPELLLFHQLDISDLASV   73 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v   73 (298)
                      .+.+|++|||||++|||+++|++|+++|++|++++|+.         +.+++..+++...+..   .   .+|+++.+++
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~---~---~~d~~d~~~~   78 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV---A---VADYNNVLDG   78 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE---E---EEECCCTTCH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe---E---EEEcCCHHHH
Confidence            36789999999999999999999999999999998765         5667777787765432   2   3688888889


Q ss_pred             HHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhh
Q 022357           74 SSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP  153 (298)
Q Consensus        74 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  153 (298)
                      +++++.+.+++|+||+||||||+....                       ++.+.+.++|++.+++|+.|+|+++++++|
T Consensus        79 ~~~v~~~~~~~G~iDiLVnNAGi~~~~-----------------------~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p  135 (604)
T 2et6_A           79 DKIVETAVKNFGTVHVIINNAGILRDA-----------------------SMKKMTEKDYKLVIDVHLNGAFAVTKAAWP  135 (604)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCB-----------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            999999999999999999999986432                       223468899999999999999999999999


Q ss_pred             hhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHH
Q 022357          154 LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAY  233 (298)
Q Consensus       154 ~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l  233 (298)
                      +|++++.|+||++||..+..+.                                          ++...|++||+|+.+|
T Consensus       136 ~m~~~~~G~IVnisS~ag~~~~------------------------------------------~~~~~Y~asKaal~~l  173 (604)
T 2et6_A          136 YFQKQKYGRIVNTSSPAGLYGN------------------------------------------FGQANYASAKSALLGF  173 (604)
T ss_dssp             HHHHHTCEEEEEECCHHHHHCC------------------------------------------TTBHHHHHHHHHHHHH
T ss_pred             HHHHcCCCEEEEECCHHHcCCC------------------------------------------CCchHHHHHHHHHHHH
Confidence            9988778999999998876543                                          6678999999999999


Q ss_pred             HHHHHHhC--CCcEEEEeeCCeeecCCCCCC------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          234 TRILAKRY--PKFCVNCVCPGFVKTDINFHA------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       234 ~~~la~e~--~~i~vn~v~PG~v~t~~~~~~------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      +++|+.|+  .|||||+|+|| +.|+|....      ...+|++.+...++++... ...+|..+.
T Consensus       174 t~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~~~~~~~~pe~vA~~v~~L~s~~-~~itG~~~~  237 (604)
T 2et6_A          174 AETLAKEGAKYNIKANAIAPL-ARSRMTESIMPPPMLEKLGPEKVAPLVLYLSSAE-NELTGQFFE  237 (604)
T ss_dssp             HHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCHHHHTTCSHHHHHHHHHHHTSSS-CCCCSCEEE
T ss_pred             HHHHHHHhCccCeEEEEEccC-CcCccccccCChhhhccCCHHHHHHHHHHHhCCc-ccCCCCEEE
Confidence            99999998  49999999998 688764321      2468889898888887655 444555543

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=2.3e-34  Score=273.21  Aligned_cols=219  Identities=24%  Similarity=0.249  Sum_probs=173.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|++|||||++|||+++|++|+++|++|++++|+... +...+.....+     ..+++||+++.++++++++++.++
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~~-----~~~~~~Dvtd~~~v~~~~~~~~~~  284 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKVG-----GTALTLDVTADDAVDKITAHVTEH  284 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHHT-----CEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHcC-----CeEEEEecCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999987532 22222222222     568999999999999999999999


Q ss_pred             cCC-ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           84 FGK-LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        84 ~g~-id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      +++ ||+||||||+....                       .+.+.+.+.|++.+++|+.|++++++++.|.|++++.++
T Consensus       285 ~g~~id~lV~nAGv~~~~-----------------------~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~  341 (454)
T 3u0b_A          285 HGGKVDILVNNAGITRDK-----------------------LLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGR  341 (454)
T ss_dssp             STTCCSEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCE
T ss_pred             cCCCceEEEECCcccCCC-----------------------ccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCE
Confidence            985 99999999987543                       223468899999999999999999999999998878899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +++..|++||+++++|+++++.++ 
T Consensus       342 iV~iSS~a~~~g~------------------------------------------~g~~~YaasKaal~~l~~~la~e~~  379 (454)
T 3u0b_A          342 VIGLSSMAGIAGN------------------------------------------RGQTNYATTKAGMIGLAEALAPVLA  379 (454)
T ss_dssp             EEEECCHHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeChHhCCCC------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999998877554                                          678999999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCC---------------CCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAG---------------ILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                       .||+||+|+||+|+|++.....               ..+|++.++..++++.......+|..+..+
T Consensus       380 ~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vd  447 (454)
T 3u0b_A          380 DKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVC  447 (454)
T ss_dssp             TTTCEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEES
T ss_pred             hcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHHHHHhCCccCCCCCcEEEEC
Confidence             5999999999999999875421               125666666666666544445555555443

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=4.6e-34  Score=256.15  Aligned_cols=222  Identities=27%  Similarity=0.339  Sum_probs=174.2

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +   .++.++++|+++.++++++++++
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dl~d~~~v~~~~~~~   84 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---A---GQVEVRELDLQDLSSVRRFADGV   84 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---S---SEEEEEECCTTCHHHHHHHHHTC
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---c---CCeeEEEcCCCCHHHHHHHHHhc
Confidence            56788999999999999999999999999999999999988776665554   1   24899999999999999888765


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                          +++|+||||||+..+.  .                       ..+.+.+++.+++|+.|+++++++++|.|.+   
T Consensus        85 ----~~iD~lv~nAg~~~~~--~-----------------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---  132 (291)
T 3rd5_A           85 ----SGADVLINNAGIMAVP--Y-----------------------ALTVDGFESQIGTNHLGHFALTNLLLPRLTD---  132 (291)
T ss_dssp             ----CCEEEEEECCCCCSCC--C-----------------------CBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE---
T ss_pred             ----CCCCEEEECCcCCCCc--c-----------------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence                7899999999986432  0                       1355677789999999999999999999963   


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                       +||++||..+..+.....      +.                       .....+++....|++||+|++.|++.++.+
T Consensus       133 -riv~isS~~~~~~~~~~~------~~-----------------------~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  182 (291)
T 3rd5_A          133 -RVVTVSSMAHWPGRINLE------DL-----------------------NWRSRRYSPWLAYSQSKLANLLFTSELQRR  182 (291)
T ss_dssp             -EEEEECCGGGTTCCCCSS------CT-----------------------TCSSSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -heeEeechhhccCCCCcc------cc-----------------------cccccCCCCcchHHHHHHHHHHHHHHHHHH
Confidence             899999988875531100      00                       001122345678999999999999999999


Q ss_pred             C--CC--cEEEEeeCCeeecCCCCCCC---------------CCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          241 Y--PK--FCVNCVCPGFVKTDINFHAG---------------ILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       241 ~--~~--i~vn~v~PG~v~t~~~~~~~---------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +  .+  |+||+|+||+|+|++.....               ..+|++.++..+.++..+  ..+|.++..
T Consensus       183 ~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~l~~~~--~~~G~~~~v  251 (291)
T 3rd5_A          183 LTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYAASQD--LPGDSFVGP  251 (291)
T ss_dssp             HHHTTCCCEEEEECCSGGGSCC--------------------CHHHHHHHHHHHHHHHSC--CCTTCEEEE
T ss_pred             HhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHcCC--CCCCceeCC
Confidence            8  35  99999999999999875421               124899999999988863  567777654

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=2.5e-34  Score=265.10  Aligned_cols=244  Identities=10%  Similarity=-0.045  Sum_probs=178.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHH-CCCEEEEEecCchhhH------------HHHHHHHhcCCCCcceeEEEeccCcHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLAS-KGITVVLTARDEKRGL------------EAVEKLKASGVDPELLLFHQLDISDLA   71 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~-~G~~Vii~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~~~Dls~~~   71 (298)
                      .+|++|||||++|||+++|+.|++ +|++|++++|+.+...            ...+.+...+..   +..+++|+++.+
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~---a~~i~~Dvtd~~  122 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLY---AKSINGDAFSDE  122 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCC---EEEEESCTTSHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCc---eEEEECCCCCHH
Confidence            479999999999999999999999 9999999998765432            233345554443   788999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEccccCCccccccc------ccccccc---cccCccccch--hhhhhhhHHHHHhhhhhh
Q 022357           72 SVSSLADFIKTQFGKLDILANNAGIASVKFDMDA------FADSGYQ---ITKGDAEVDW--SKVCYQTYELAVECLKTN  140 (298)
Q Consensus        72 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~------~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~N  140 (298)
                      +++++++.+.+++|++|+||||||......+...      ....+..   .+.+.....|  ..+.+.+.++|+..+++|
T Consensus       123 ~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn  202 (405)
T 3zu3_A          123 IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM  202 (405)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence            9999999999999999999999997522100000      0000000   0000000000  122456889999999999


Q ss_pred             ceeHH-HHHHHHhh-hhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCC
Q 022357          141 YYGTK-QTCEALIP-LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCP  218 (298)
Q Consensus       141 ~~~~~-~l~~~~~~-~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (298)
                      ..+.| ++++++.+ .|.+ ++|+||++||+.+..+.                                          +
T Consensus       203 ~~~~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~~------------------------------------------p  239 (405)
T 3zu3_A          203 GGEDWQMWIDALLDAGVLA-EGAQTTAFTYLGEKITH------------------------------------------D  239 (405)
T ss_dssp             SSHHHHHHHHHHHHHTCEE-EEEEEEEEECCCCGGGT------------------------------------------T
T ss_pred             chhHHHHHHHHHHHHhhhh-CCcEEEEEeCchhhCcC------------------------------------------C
Confidence            99998 78888764 4554 45899999998876543                                          4


Q ss_pred             CC--chhhhHHHHHHHHHHHHHHhC--C-CcEEEEeeCCeeecCCCCCCCCCCh-hhhhhhhhhhhccCCCCCcceEecc
Q 022357          219 HS--SAYKVSKAVINAYTRILAKRY--P-KFCVNCVCPGFVKTDINFHAGILSV-EEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       219 ~~--~~Y~~sK~al~~l~~~la~e~--~-~i~vn~v~PG~v~t~~~~~~~~~~~-~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      .+  ..|++||+|+.+|+|+||.|+  . |||||+|+||+|.|++....+.... ......++++...+++.+....||.
T Consensus       240 ~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~  319 (405)
T 3zu3_A          240 IYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLY  319 (405)
T ss_dssp             TTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence            45  899999999999999999999  5 8999999999999998765432111 1123447888888888877777776


Q ss_pred             Cc
Q 022357          293 KE  294 (298)
Q Consensus       293 ~~  294 (298)
                      ++
T Consensus       320 sd  321 (405)
T 3zu3_A          320 KD  321 (405)
T ss_dssp             HH
T ss_pred             hc
Confidence            65

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.3e-33  Score=246.06  Aligned_cols=219  Identities=27%  Similarity=0.362  Sum_probs=180.5

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEE-ecCchhhHHHHHHHHhcCCCCcceeE-EEeccCcHHHHHHHHHHHHHh
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLF-HQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~-~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +|+++||||+||||++++++|+++|++|+++ +|+.++++...+++...+..   +.. +.+|+++.++++++++++.+.
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSP---LVAVLGANLLEAEAATALVHQAAEV   77 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCS---CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc---eEEEEeccCCCHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999998 89888877777777765433   555 899999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      ++++|+||||||.....+                       +.+.+.+.+++.+++|+.+++++++.++|.|++++.++|
T Consensus        78 ~~~~d~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~i  134 (245)
T 2ph3_A           78 LGGLDTLVNNAGITRDTL-----------------------LVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRI  134 (245)
T ss_dssp             HTCCCEEEECCCCCCCBC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             cCCCCEEEECCCCCCCCC-----------------------cccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEE
Confidence            999999999999864321                       223577889999999999999999999999987777899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+.                                          +....|++||+|++.++++++.++  
T Consensus       135 v~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~  172 (245)
T 2ph3_A          135 VNITSVVGILGN------------------------------------------PGQANYVASKAGLIGFTRAVAKEYAQ  172 (245)
T ss_dssp             EEECCTHHHHCC------------------------------------------SSBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             EEEeChhhccCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHHH
Confidence            999998765432                                          557889999999999999999998  


Q ss_pred             CCcEEEEeeCCeeecCCCCCC---------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          242 PKFCVNCVCPGFVKTDINFHA---------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~---------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      .+|++|+|+||++.|++....               ...++++.++..+..+..+....+|..+..
T Consensus       173 ~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  238 (245)
T 2ph3_A          173 RGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCV  238 (245)
T ss_dssp             GTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             cCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEE
Confidence            489999999999999864321               134788888888887765444444544443

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=6.4e-34  Score=250.04  Aligned_cols=201  Identities=24%  Similarity=0.300  Sum_probs=165.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH-HHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~-Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~   80 (298)
                      ++++|+++||||+||||++++++|+++|++ |++++|+...  +..+++..... ...+.++++|+++. ++++++++.+
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINP-KVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCT-TSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCC-CceEEEEEEecCCChHHHHHHHHHH
Confidence            468899999999999999999999999996 9999998642  22333433221 12388999999998 9999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-  159 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-  159 (298)
                      .+.++++|+||||||+.                               +.+.+++.+++|+.++++++++++|.|.+++ 
T Consensus        79 ~~~~g~id~lv~~Ag~~-------------------------------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  127 (254)
T 1sby_A           79 FDQLKTVDILINGAGIL-------------------------------DDHQIERTIAINFTGLVNTTTAILDFWDKRKG  127 (254)
T ss_dssp             HHHHSCCCEEEECCCCC-------------------------------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT
T ss_pred             HHhcCCCCEEEECCccC-------------------------------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcC
Confidence            99999999999999974                               2345678899999999999999999997653 


Q ss_pred             --CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH
Q 022357          160 --SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       160 --~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l  237 (298)
                        .|+||++||..+..+.                                          +....|++||+|++.|++++
T Consensus       128 ~~~g~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~l  165 (254)
T 1sby_A          128 GPGGIIANICSVTGFNAI------------------------------------------HQVPVYSASKAAVVSFTNSL  165 (254)
T ss_dssp             CCCEEEEEECCGGGTSCC------------------------------------------TTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECchhhccCC------------------------------------------CCchHHHHHHHHHHHHHHHH
Confidence              5899999998876443                                          56789999999999999999


Q ss_pred             HHhC--CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhc
Q 022357          238 AKRY--PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLAL  279 (298)
Q Consensus       238 a~e~--~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~  279 (298)
                      +.++  .+|+||+|+||+|+|++....                 +..++++.++..+..+.
T Consensus       166 a~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~~~~  226 (254)
T 1sby_A          166 AKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIE  226 (254)
T ss_dssp             HHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHH
T ss_pred             HHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence            9987  489999999999999874321                 22468888888777664

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.3e-34  Score=255.44  Aligned_cols=223  Identities=24%  Similarity=0.227  Sum_probs=178.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCC--CCcceeEEEeccCcHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGV--DPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .+.+|++|||||+||||++++++|+++|++|++++|+.+++....+++.....  ....+.++++|+++.++++++++.+
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998888888888875210  1123889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||.....+                       +.+.+.+.+++.+++|+.++++++++++|.+.+++.
T Consensus        95 ~~~~g~id~li~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  151 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGGQFLSP-----------------------AEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHG  151 (303)
T ss_dssp             HHHHSCCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHC
T ss_pred             HHHcCCCCEEEECCCCCCCCc-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999654321                       123577889999999999999999999996544446


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||.. ..+.                                          +....|+++|+|+.+|+++++.+
T Consensus       152 ~~iv~isS~~-~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e  188 (303)
T 1yxm_A          152 GSIVNIIVPT-KAGF------------------------------------------PLAVHSGAARAGVYNLTKSLALE  188 (303)
T ss_dssp             EEEEEECCCC-TTCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeec-ccCC------------------------------------------CcchhhHHHHHHHHHHHHHHHHH
Confidence            8999999976 3221                                          55788999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCC--CCCC-----------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          241 Y--PKFCVNCVCPGFVKTDI--NFHA-----------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~--~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      +  .+|+||+|+||+|.|++  ....                 ...++++.++..+.++.......+|..+.
T Consensus       189 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~  260 (303)
T 1yxm_A          189 WACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVD  260 (303)
T ss_dssp             TGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccCCCcEEE
Confidence            8  48999999999999984  2110                 13467777777777765443334444443

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=3.5e-34  Score=250.49  Aligned_cols=208  Identities=27%  Similarity=0.248  Sum_probs=169.3

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHH-CCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLAS-KGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~-~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .++|++|||||++|||+++|++|++ .|++|++++|+++..             ...+.++++|+++.++++++++.+ +
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~-~   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-------------AENLKFIKADLTKQQDITNVLDII-K   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-------------CTTEEEEECCTTCHHHHHHHHHHT-T
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-------------cccceEEecCcCCHHHHHHHHHHH-H
Confidence            3578999999999999999999999 799999999886511             112789999999999999999554 3


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                       ++++|+||||||+....+                       +.+.+.++|++.+++|+.|+++++++++|.|+++  |+
T Consensus        68 -~~~id~lv~nAg~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~  121 (244)
T 4e4y_A           68 -NVSFDGIFLNAGILIKGS-----------------------IFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--AS  121 (244)
T ss_dssp             -TCCEEEEEECCCCCCCBC-----------------------TTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EE
T ss_pred             -hCCCCEEEECCccCCCCC-----------------------cccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cE
Confidence             789999999999875432                       2236889999999999999999999999999754  89


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.|+ 
T Consensus       122 iv~~sS~~~~~~~------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~  159 (244)
T 4e4y_A          122 IVFNGSDQCFIAK------------------------------------------PNSFAYTLSKGAIAQMTKSLALDLA  159 (244)
T ss_dssp             EEEECCGGGTCCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEECCHHHccCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHH
Confidence            9999998876543                                          667899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCC--------------------------CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFH--------------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~--------------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                       .+|+||+|+||+|+|++...                          ....+|++.++..+.++.......+|..+..+
T Consensus       160 ~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vd  238 (244)
T 4e4y_A          160 KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPID  238 (244)
T ss_dssp             GGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccccccCCeEeEC
Confidence             48999999999999986421                          11347788888877777655555556555443

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.3e-34  Score=251.23  Aligned_cols=203  Identities=28%  Similarity=0.343  Sum_probs=167.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|++|||||+||||++++++|+++|++|++++|+.+++.+..+++..... ...+.++++|+++.++++++++.+.++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE-PQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC-GGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcC-CCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998877776666654211 123889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC---C
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---S  160 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~  160 (298)
                      ++++|+||||||...                               .+.|++.+++|+.+++.+++.++|.|++++   .
T Consensus        84 ~g~id~lv~~Ag~~~-------------------------------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~  132 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN-------------------------------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEG  132 (267)
T ss_dssp             HSCCCEEEECCCCCC-------------------------------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC
T ss_pred             cCCCCEEEECCCCCC-------------------------------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCC
Confidence            999999999999752                               234567899999999999999999997653   5


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH--H
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL--A  238 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l--a  238 (298)
                      |+||++||..+..+.                                          +....|++||+|++.|++++  +
T Consensus       133 g~iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~~ala  170 (267)
T 2gdz_A          133 GIIINMSSLAGLMPV------------------------------------------AQQPVYCASKHGIVGFTRSAALA  170 (267)
T ss_dssp             EEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCccccCCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHH
Confidence            899999998876443                                          55788999999999999995  5


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCC-----------------------CCCChhhhhhhhhhhhcc
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHA-----------------------GILSVEEGAESPVKLALL  280 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~-----------------------~~~~~~~~a~~~~~~~~~  280 (298)
                      .++  .+|+||+|+||+|+|++....                       .+.+|++.++..+.++..
T Consensus       171 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~  237 (267)
T 2gdz_A          171 ANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIED  237 (267)
T ss_dssp             HHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHC
T ss_pred             HHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcC
Confidence            666  589999999999999863211                       123677777777776654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=2.9e-33  Score=254.41  Aligned_cols=215  Identities=18%  Similarity=0.185  Sum_probs=177.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEe---------cCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA---------RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASV   73 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~---------r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v   73 (298)
                      .+.+|++|||||++|||+++|++|+++|++|++++         |+.++++...+++...+..      ..+|+++.+++
T Consensus         6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~------~~~D~~~~~~~   79 (319)
T 1gz6_A            6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK------AVANYDSVEAG   79 (319)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE------EEEECCCGGGH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe------EEEeCCCHHHH
Confidence            46789999999999999999999999999999964         5666777777787765431      25899999999


Q ss_pred             HHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhh
Q 022357           74 SSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIP  153 (298)
Q Consensus        74 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~  153 (298)
                      +++++.+.+.++++|+||||||+....+                       +.+.+.+.|+..+++|+.|+++++++++|
T Consensus        80 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  136 (319)
T 1gz6_A           80 EKLVKTALDTFGRIDVVVNNAGILRDRS-----------------------FSRISDEDWDIIQRVHLRGSFQVTRAAWD  136 (319)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            9999999999999999999999865331                       22357889999999999999999999999


Q ss_pred             hhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHH
Q 022357          154 LLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAY  233 (298)
Q Consensus       154 ~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l  233 (298)
                      .|++++.|+||++||..+..+.                                          ++...|++||+|+++|
T Consensus       137 ~m~~~~~grIV~vsS~~~~~~~------------------------------------------~~~~~Y~aSK~a~~~~  174 (319)
T 1gz6_A          137 HMKKQNYGRIIMTASASGIYGN------------------------------------------FGQANYSAAKLGLLGL  174 (319)
T ss_dssp             HHHHHTCEEEEEECCHHHHHCC------------------------------------------TTCHHHHHHHHHHHHH
T ss_pred             HHHHcCCCEEEEECChhhccCC------------------------------------------CCCHHHHHHHHHHHHH
Confidence            9987777999999997765433                                          5578999999999999


Q ss_pred             HHHHHHhC--CCcEEEEeeCCeeecCCCCCC------CCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          234 TRILAKRY--PKFCVNCVCPGFVKTDINFHA------GILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       234 ~~~la~e~--~~i~vn~v~PG~v~t~~~~~~------~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      ++.++.++  .||+||+|+||++ |++....      ...+|++.+...+.++..+. ..+|.+|
T Consensus       175 ~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~~~~~~~~p~dvA~~~~~l~s~~~-~~tG~~~  237 (319)
T 1gz6_A          175 ANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPEDLVEALKPEYVAPLVLWLCHESC-EENGGLF  237 (319)
T ss_dssp             HHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCHHHHHHSCGGGTHHHHHHHTSTTC-CCCSCEE
T ss_pred             HHHHHHHhcccCEEEEEEeCCCc-cccccccCChhhhccCCHHHHHHHHHHHhCchh-hcCCCEE
Confidence            99999999  4899999999998 8775431      13578888888888776543 3344444

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=3.2e-33  Score=243.71  Aligned_cols=215  Identities=24%  Similarity=0.235  Sum_probs=173.1

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +.+++|++|||||+||||++++++|+++|++|++++|+.+++++..+++.    .   ..++++|+++.++++++++   
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~---~~~~~~D~~~~~~~~~~~~---   72 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----G---IEPVCVDLGDWEATERALG---   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----T---CEEEECCTTCHHHHHHHHT---
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----C---CCEEEEeCCCHHHHHHHHH---
Confidence            45789999999999999999999999999999999999877665554432    1   5667999999999888775   


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-C
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-S  160 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~  160 (298)
                       .++++|+||||||.....                       ++.+.+.+.+++.+++|+.+++++++++.|.|++++ .
T Consensus        73 -~~~~id~vi~~Ag~~~~~-----------------------~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~  128 (244)
T 3d3w_A           73 -SVGPVDLLVNNAAVALLQ-----------------------PFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVP  128 (244)
T ss_dssp             -TCCCCCEEEECCCCCCCB-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred             -HcCCCCEEEECCccCCCc-----------------------chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC
Confidence             568999999999976432                       122357788999999999999999999999998765 6


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          +....|++||+|++.|+++++.+
T Consensus       129 ~~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e  166 (244)
T 3d3w_A          129 GAIVNVSSQCSQRAV------------------------------------------TNHSVYCSTKGALDMLTKVMALE  166 (244)
T ss_dssp             EEEEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEeCchhhccCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHH
Confidence            899999998765432                                          55789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCC-----------------CCCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFH-----------------AGILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~-----------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +  .+|+||+|+||+|.|++...                 ..+.++++.++..+.++.......+|..+..
T Consensus       167 ~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  237 (244)
T 3d3w_A          167 LGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPV  237 (244)
T ss_dssp             HGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEE
Confidence            8  48999999999999987421                 0134788888888877765444445554443

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=3.1e-33  Score=250.01  Aligned_cols=210  Identities=23%  Similarity=0.271  Sum_probs=178.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++.+|++|||||+||||++++++|+++|++|++++|+.++++...+++...+..  .+.++++|+++.++++++++.+.+
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA--SAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCS--EEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCC--ceEEEeCCCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999998888888777765432  388999999999999999999999


Q ss_pred             hcCCccEEEEc-cccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           83 QFGKLDILANN-AGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        83 ~~g~id~lv~n-Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      .++++|+|||| ||..... .                       .+.+.+.+++.+++|+.|++.++++++|.|+++ .|
T Consensus       103 ~~g~iD~li~naag~~~~~-~-----------------------~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g  157 (286)
T 1xu9_A          103 LMGGLDMLILNHITNTSLN-L-----------------------FHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NG  157 (286)
T ss_dssp             HHTSCSEEEECCCCCCCCC-C-----------------------CCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TC
T ss_pred             HcCCCCEEEECCccCCCCc-c-----------------------ccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CC
Confidence            99999999999 5654321 1                       123678889999999999999999999998754 48


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|++.|+++++.|+
T Consensus       158 ~iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~l~~e~  195 (286)
T 1xu9_A          158 SIVVVSSLAGKVAY------------------------------------------PMVAAYSASKFALDGFFSSIRKEY  195 (286)
T ss_dssp             EEEEEEEGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCcccccCC------------------------------------------CCccHHHHHHHHHHHHHHHHHHHH
Confidence            99999998876443                                          567899999999999999999987


Q ss_pred             ----CCcEEEEeeCCeeecCCCCC-------CCCCChhhhhhhhhhhhccC
Q 022357          242 ----PKFCVNCVCPGFVKTDINFH-------AGILSVEEGAESPVKLALLP  281 (298)
Q Consensus       242 ----~~i~vn~v~PG~v~t~~~~~-------~~~~~~~~~a~~~~~~~~~~  281 (298)
                          .+|+|++|+||+|+|++...       ....++++.++..+..+...
T Consensus       196 ~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          196 SVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             HHHTCCCEEEEEEECCBCCHHHHHHSCGGGGGGCBCHHHHHHHHHHHHHTT
T ss_pred             hhcCCCeEEEEeecCccCChhHHHhccccccCCCCCHHHHHHHHHHHHhcC
Confidence                48999999999999987421       23578999999988877643

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=1.5e-33  Score=257.18  Aligned_cols=189  Identities=22%  Similarity=0.220  Sum_probs=153.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhc---CCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS---GVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+|++|||||++|||++++++|+++|++|++++|+..++....+.+...   .....++.++++|+++.++++++++.+ 
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-   79 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV-   79 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH-
Confidence            3689999999999999999999999999999888765544333333221   111123889999999999999999887 


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                       .++++|+||||||+....                       ++.+.+.+.|++.+++|+.|+++++++++|.|++++.|
T Consensus        80 -~~g~iD~lVnnAG~~~~~-----------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g  135 (327)
T 1jtv_A           80 -TEGRVDVLVCNAGLGLLG-----------------------PLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG  135 (327)
T ss_dssp             -TTSCCSEEEECCCCCCCS-----------------------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred             -hcCCCCEEEECCCcCCCC-----------------------chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence             358999999999976432                       22235788999999999999999999999999877779


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +....|++||+|+++|+++++.|+
T Consensus       136 ~IV~isS~~~~~~~------------------------------------------~~~~~Y~aSK~a~~~~~~~la~el  173 (327)
T 1jtv_A          136 RVLVTGSVGGLMGL------------------------------------------PFNDVYCASKFALEGLCESLAVLL  173 (327)
T ss_dssp             EEEEEEEGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCcccccCC------------------------------------------CCChHHHHHHHHHHHHHHHHHHHh
Confidence            99999998876543                                          567899999999999999999998


Q ss_pred             --CCcEEEEeeCCeeecCCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~  260 (298)
                        .+|+||+|+||+|+|++..
T Consensus       174 ~~~gI~v~~v~PG~v~T~~~~  194 (327)
T 1jtv_A          174 LPFGVHLSLIECGPVHTAFME  194 (327)
T ss_dssp             GGGTEEEEEEEECCBCC----
T ss_pred             hhcCcEEEEEEeCcccChHHh
Confidence              4899999999999999864

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1e-32  Score=244.28  Aligned_cols=219  Identities=26%  Similarity=0.269  Sum_probs=178.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+++|++|||||+||||++++++|+++|++|++++| +.+.++...++++..+..   +.++++|+++.++++++++++.
T Consensus        18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~---~~~~~~D~~~~~~~~~~~~~~~   94 (274)
T 1ja9_A           18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ---GVAIQADISKPSEVVALFDKAV   94 (274)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCc---EEEEEecCCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999 766777777777765433   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ++++++|+||||||.....                       ++.+.+.+.+++.+++|+.++++++++++|.|++ + +
T Consensus        95 ~~~~~~d~vi~~Ag~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~  149 (274)
T 1ja9_A           95 SHFGGLDFVMSNSGMEVWC-----------------------DELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-G-G  149 (274)
T ss_dssp             HHHSCEEEEECCCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-E-E
T ss_pred             HHcCCCCEEEECCCCCCCc-----------------------ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-C-C
Confidence            9999999999999976432                       1223577889999999999999999999999973 3 8


Q ss_pred             cEEEEccCccc-ccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          162 RLVNLSSYVSA-LKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       162 ~iv~vsS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      +||++||..+. .+.                                          +....|++||++++.|++.++.+
T Consensus       150 ~iv~~sS~~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~e  187 (274)
T 1ja9_A          150 RIILTSSIAAVMTGI------------------------------------------PNHALYAGSKAAVEGFCRAFAVD  187 (274)
T ss_dssp             EEEEECCGGGTCCSC------------------------------------------CSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcChHhccCCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHH
Confidence            99999998765 322                                          55788999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCC------------CC----------------CCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          241 Y--PKFCVNCVCPGFVKTDINF------------HA----------------GILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~------------~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      +  .+|++|+|+||++.|++..            ..                .+.++++.++..+.++..+.....|..|
T Consensus       188 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~  267 (274)
T 1ja9_A          188 CGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVI  267 (274)
T ss_dssp             HGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             hhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccccccCcEE
Confidence            8  5999999999999997643            10                1236777777777666544333344444


Q ss_pred             c
Q 022357          291 L  291 (298)
Q Consensus       291 l  291 (298)
                      .
T Consensus       268 ~  268 (274)
T 1ja9_A          268 K  268 (274)
T ss_dssp             E
T ss_pred             E
Confidence            3

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=2.9e-33  Score=245.82  Aligned_cols=208  Identities=17%  Similarity=0.083  Sum_probs=173.7

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .++|++|||||++|||+++|++|+++|++|++++|+.++..               ...+.+|+++.++++++++.+.+.
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~d~~d~~~v~~~~~~~~~~   84 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA---------------DHSFTIKDSGEEEIKSVIEKINSK   84 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------------SEEEECSCSSHHHHHHHHHHHHTT
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------ccceEEEeCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999976421               235789999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      ++++|+||||||.......                      +.+.+.+.+++.+++|+.|+++++++++|.|++  .|+|
T Consensus        85 ~g~iD~li~~Ag~~~~~~~----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~i  140 (251)
T 3orf_A           85 SIKVDTFVCAAGGWSGGNA----------------------SSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLF  140 (251)
T ss_dssp             TCCEEEEEECCCCCCCBCT----------------------TSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEE
T ss_pred             cCCCCEEEECCccCCCCCc----------------------ccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEE
Confidence            9999999999998654321                      113577899999999999999999999999975  4899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+.                                          +....|++||+|++.|+++++.++  
T Consensus       141 v~isS~~~~~~~------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~  178 (251)
T 3orf_A          141 VLTGASAALNRT------------------------------------------SGMIAYGATKAATHHIIKDLASENGG  178 (251)
T ss_dssp             EEECCGGGGSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHTSTTSS
T ss_pred             EEEechhhccCC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhcc
Confidence            999998876543                                          667899999999999999999995  


Q ss_pred             --CCcEEEEeeCCeeecCCCCC-------CCCCChhhhhhhhhhhhcc-CCCCCcceEecc
Q 022357          242 --PKFCVNCVCPGFVKTDINFH-------AGILSVEEGAESPVKLALL-PDGGPTGRFFLR  292 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~-------~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~l~  292 (298)
                        .+|+||+|+||+|+|++...       ....++++.++..+.++.. .....+|..+..
T Consensus       179 ~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v  239 (251)
T 3orf_A          179 LPAGSTSLGILPVTLDTPTNRKYMSDANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKF  239 (251)
T ss_dssp             SCTTCEEEEEEESCBCCHHHHHHCTTSCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             cCCCcEEEEEecCcCcCcchhhhcccccccccCCHHHHHHHHHHHhcCccccCCcceEEEE
Confidence              48999999999999987532       1246899999999998877 444556665543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-33  Score=243.09  Aligned_cols=209  Identities=13%  Similarity=0.073  Sum_probs=170.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++|++|||||++|||++++++|+++|++|++++|++++...             ...++++|+++.++++++++.+.+.+
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-------------SNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-------------EEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc-------------ccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999765321             25678899999999999999999998


Q ss_pred             --CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           85 --GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        85 --g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                        +++|+||||||.....+..                      .+.+.+.+++.+++|+.++++++++++|.|++  .|+
T Consensus        69 ~~g~id~lv~~Ag~~~~~~~~----------------------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~  124 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGWAGGSAS----------------------SKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGL  124 (236)
T ss_dssp             TTCCEEEEEECCCCCCCBCTT----------------------STTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEE
T ss_pred             CCCCCCEEEECCcccCCCCCc----------------------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCE
Confidence              7999999999976432210                      12477889999999999999999999999964  489


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      ||++||..+..+.                                          +....|++||+|+++|+++++.|+.
T Consensus       125 iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~  162 (236)
T 1ooe_A          125 LQLTGAAAAMGPT------------------------------------------PSMIGYGMAKAAVHHLTSSLAAKDS  162 (236)
T ss_dssp             EEEECCGGGGSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHSTTS
T ss_pred             EEEECchhhccCC------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999998876443                                          6678999999999999999999973


Q ss_pred             ----CcEEEEeeCCeeecCCCCC-------CCCCChhhhhhhhhhhhcc-CCCCCcceEecc
Q 022357          243 ----KFCVNCVCPGFVKTDINFH-------AGILSVEEGAESPVKLALL-PDGGPTGRFFLR  292 (298)
Q Consensus       243 ----~i~vn~v~PG~v~t~~~~~-------~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~l~  292 (298)
                          +|+||+|+||+|+|++...       ....++++.++..+..+.+ .....+|.++..
T Consensus       163 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v  224 (236)
T 1ooe_A          163 GLPDNSAVLTIMPVTLDTPMNRKWMPNADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKI  224 (236)
T ss_dssp             SCCTTCEEEEEEESCBCCHHHHHHSTTCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             ccCCCeEEEEEecCcccCcchhhcCCCccccccCCHHHHHHHHHHHHcCCCcccccccEEEE
Confidence                7999999999999987532       1235788999888755532 233445555543

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=8.5e-34  Score=248.07  Aligned_cols=204  Identities=19%  Similarity=0.136  Sum_probs=149.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++|++|||||++|||+++|++|++ |++|++++|+.++++...+    . .   .+.++.+|+++..+ ...+....+
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----~-~---~~~~~~~D~~~~~~-~~~~~~~~~   71 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----I-E---GVEPIESDIVKEVL-EEGGVDKLK   71 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----S-T---TEEEEECCHHHHHH-TSSSCGGGT
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----h-c---CCcceecccchHHH-HHHHHHHHH
Confidence            46789999999999999999999998 9999999999876655433    1 1   28899999999877 444445556


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++++|+||||||.....                       .+.+.+.+.|++.+++|+.++++++++++|.|++++ |+
T Consensus        72 ~~~~id~lv~~Ag~~~~~-----------------------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~  127 (245)
T 3e9n_A           72 NLDHVDTLVHAAAVARDT-----------------------TIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GC  127 (245)
T ss_dssp             TCSCCSEEEECC---------------------------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CE
T ss_pred             hcCCCCEEEECCCcCCCC-----------------------chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-Ce
Confidence            778999999999987543                       222358899999999999999999999999997654 89


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|++.|+++++.|+ 
T Consensus       128 iv~isS~~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~  165 (245)
T 3e9n_A          128 VIYINSGAGNGPH------------------------------------------PGNTIYAASKHALRGLADAFRKEEA  165 (245)
T ss_dssp             EEEEC----------------------------------------------------CHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEEcCcccccCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhh
Confidence            9999998876543                                          667899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC-----------CCCChhhhhhhhhhhhccCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA-----------GILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~-----------~~~~~~~~a~~~~~~~~~~~  282 (298)
                       .+|+||+|+||+|+|++....           .+.+|++.++..+.++..+.
T Consensus       166 ~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~~~~~  218 (245)
T 3e9n_A          166 NNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIRFVIDAGE  218 (245)
T ss_dssp             GGTCEEEEEEECCC----------------CCGGGSCHHHHHHHHHHHHTSCT
T ss_pred             hcCeEEEEEecCCccCchhhhhhhhhhcccccccCCCHHHHHHHHHHHHcCCC
Confidence             489999999999999976432           24688999999888887554

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=6.4e-34  Score=258.47  Aligned_cols=192  Identities=19%  Similarity=0.235  Sum_probs=128.2

Q ss_pred             CCCcEEEEeCC--CCchhHHHHHHHHHCCCEEEEEecCc-----------hhhH-----------HHHHHHHhcCCCCcc
Q 022357            4 ATKKYAVVTGS--NKGIGFETVRQLASKGITVVLTARDE-----------KRGL-----------EAVEKLKASGVDPEL   59 (298)
Q Consensus         4 ~~~~~vlITGa--s~gIG~a~a~~La~~G~~Vii~~r~~-----------~~~~-----------~~~~~~~~~~~~~~~   59 (298)
                      +.+|++|||||  ++|||+++|++|+++|++|++++|++           ++++           +..+++...+.....
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVF   86 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CC
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccc
Confidence            67899999999  89999999999999999999998753           1111           122333322211000


Q ss_pred             eeEEEe------------ccCc--------HHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccc
Q 022357           60 LLFHQL------------DISD--------LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAE  119 (298)
Q Consensus        60 ~~~~~~------------Dls~--------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~  119 (298)
                      ..++.+            |+++        .++++++++++.+++|++|+||||||+....                   
T Consensus        87 ~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~-------------------  147 (319)
T 2ptg_A           87 DKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEV-------------------  147 (319)
T ss_dssp             SEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSS-------------------
T ss_pred             cccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCC-------------------
Confidence            233333            3343        4589999999999999999999999975310                   


Q ss_pred             cchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHH
Q 022357          120 VDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVV  199 (298)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (298)
                        +.++.+.+.+.|++.+++|+.++++++++++|+|++  .|+||++||..+..+.                        
T Consensus       148 --~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~------------------------  199 (319)
T 2ptg_A          148 --TKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKE--GGSALALSYIASEKVI------------------------  199 (319)
T ss_dssp             --SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEEECC-----------------------------
T ss_pred             --CCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhc--CceEEEEecccccccc------------------------
Confidence              112234688999999999999999999999999975  3899999998876432                        


Q ss_pred             HHHHHhhhhhhhhcCCCCCCC-chhhhHHHHHHHHHHHHHHhC---CCcEEEEeeCCeeecCCCC
Q 022357          200 KDYFKDYEEGEIANRGWCPHS-SAYKVSKAVINAYTRILAKRY---PKFCVNCVCPGFVKTDINF  260 (298)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~al~~l~~~la~e~---~~i~vn~v~PG~v~t~~~~  260 (298)
                                        ++. ..|++||+|+++|+++|+.|+   .+|+||+|+||+|+|++..
T Consensus       200 ------------------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~  246 (319)
T 2ptg_A          200 ------------------PGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAAS  246 (319)
T ss_dssp             -------------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-----
T ss_pred             ------------------CccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhh
Confidence                              444 589999999999999999997   3899999999999999754

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-32  Score=238.32  Aligned_cols=214  Identities=24%  Similarity=0.252  Sum_probs=172.1

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .++++|++|||||+||||++++++|+++|++|++++|+.+++++..+++   . .   ..++++|+++.++++++++   
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~---~~~~~~D~~~~~~~~~~~~---   72 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC---P-G---IEPVCVDLGDWDATEKALG---   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---T-T---CEEEECCTTCHHHHHHHHT---
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---c-C---CCcEEecCCCHHHHHHHHH---
Confidence            4578899999999999999999999999999999999987665554432   1 1   5667999999999888776   


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-C
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-S  160 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~  160 (298)
                       .++++|+||||||.....+                       +.+.+.+.+++.+++|+.++++++++++|.|++++ .
T Consensus        73 -~~~~id~vi~~Ag~~~~~~-----------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  128 (244)
T 1cyd_A           73 -GIGPVDLLVNNAALVIMQP-----------------------FLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVP  128 (244)
T ss_dssp             -TCCCCSEEEECCCCCCCBC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred             -HcCCCCEEEECCcccCCCC-----------------------cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC
Confidence             5688999999999764321                       22357788999999999999999999999998765 6


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+..+.                                          +....|++||++++.|++.++.+
T Consensus       129 ~~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~~a~~  166 (244)
T 1cyd_A          129 GSIVNVSSMVAHVTF------------------------------------------PNLITYSSTKGAMTMLTKAMAME  166 (244)
T ss_dssp             EEEEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEcchhhcCCC------------------------------------------CCcchhHHHHHHHHHHHHHHHHH
Confidence            899999998765432                                          55788999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCC-----------------CCCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFH-----------------AGILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~-----------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      +  .+|++|+|+||++.|++...                 ..+.++++.++..+.++..+....+|..+.
T Consensus       167 ~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  236 (244)
T 1cyd_A          167 LGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGIL  236 (244)
T ss_dssp             HGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEE
T ss_pred             hhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcccCCEEE
Confidence            8  58999999999999986321                 123578888888887776544444454443

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=1.9e-32  Score=269.03  Aligned_cols=217  Identities=18%  Similarity=0.203  Sum_probs=164.8

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec---------CchhhHHHHHHHHhcCCCCcceeEEEeccCcHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR---------DEKRGLEAVEKLKASGVDPELLLFHQLDISDLAS   72 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~   72 (298)
                      .++.+|++|||||++|||+++|++|+++|++|++++|         +.+.++...+++...+..      ..+|+++.++
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~D~~d~~~   88 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE------AVADYNSVID   88 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC------EEECCCCGGG
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe------EEEEeCCHHH
Confidence            3578999999999999999999999999999999988         666778888888876543      2489999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHh
Q 022357           73 VSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALI  152 (298)
Q Consensus        73 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~  152 (298)
                      ++++++.+.+.+|+||+||||||+.....                       +.+.+.++|++.+++|+.|+++++++++
T Consensus        89 ~~~~~~~~~~~~g~iDiLVnnAGi~~~~~-----------------------~~~~~~~~~~~~~~vNl~g~~~l~~~~~  145 (613)
T 3oml_A           89 GAKVIETAIKAFGRVDILVNNAGILRDRS-----------------------LVKTSEQDWNLVNDVHLKGSFKCTQAAF  145 (613)
T ss_dssp             HHHHHC----------CEECCCCCCCCCC-----------------------STTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCcEEEECCCCCCCCC-----------------------cccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999875432                       2235889999999999999999999999


Q ss_pred             hhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHH
Q 022357          153 PLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINA  232 (298)
Q Consensus       153 ~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~  232 (298)
                      |.|++++.|+||++||..+..+.                                          ++...|++||+|+.+
T Consensus       146 p~m~~~~~g~IV~isS~a~~~~~------------------------------------------~~~~~Y~asKaal~~  183 (613)
T 3oml_A          146 PYMKKQNYGRIIMTSSNSGIYGN------------------------------------------FGQVNYTAAKMGLIG  183 (613)
T ss_dssp             HHHHTTTCEEEEEECCHHHHHCC------------------------------------------TTCHHHHHHHHHHHH
T ss_pred             HHHHHcCCCEEEEECCHHHcCCC------------------------------------------CCChHHHHHHHHHHH
Confidence            99998888999999998876543                                          667899999999999


Q ss_pred             HHHHHHHhC--CCcEEEEeeCCeeecCCCCCC------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          233 YTRILAKRY--PKFCVNCVCPGFVKTDINFHA------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       233 l~~~la~e~--~~i~vn~v~PG~v~t~~~~~~------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      |+++|+.|+  .||+||+|+||++ |++....      ...+|++.+...+.++... ...+|.++.
T Consensus       184 lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~~~~~~~pedvA~~v~~L~s~~-~~~tG~~i~  248 (613)
T 3oml_A          184 LANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDILFNELKPKLIAPVVAYLCHES-CEDNGSYIE  248 (613)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEEC-------CCCCCHHHHTTCCGGGTHHHHHHTTSTT-CCCCSCEEE
T ss_pred             HHHHHHHHhCccCeEEEEEECCCC-ChhhhhccchhhhhcCCHHHHHHHHHHhcCCC-cCCCceEEE
Confidence            999999999  4899999999985 5554321      2457888888888777654 444555544

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=2.3e-32  Score=247.93  Aligned_cols=191  Identities=20%  Similarity=0.183  Sum_probs=146.5

Q ss_pred             CCCcEEEEeCC--CCchhHHHHHHHHHCCCEEEEEecCchh------h-HHHHHHHHhc--CCCCcceeEEE--------
Q 022357            4 ATKKYAVVTGS--NKGIGFETVRQLASKGITVVLTARDEKR------G-LEAVEKLKAS--GVDPELLLFHQ--------   64 (298)
Q Consensus         4 ~~~~~vlITGa--s~gIG~a~a~~La~~G~~Vii~~r~~~~------~-~~~~~~~~~~--~~~~~~~~~~~--------   64 (298)
                      +.+|++|||||  ++|||+++|++|+++|++|++++|++..      . ....+++...  +.......++.        
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~   86 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKP   86 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSST
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccccc
Confidence            67899999999  8999999999999999999999986410      0 0011112211  11000123333        


Q ss_pred             ----eccCc--------HHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHH
Q 022357           65 ----LDISD--------LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYEL  132 (298)
Q Consensus        65 ----~Dls~--------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (298)
                          +|+++        .++++++++++.+++|++|+||||||+....                     +.++.+.+.+.
T Consensus        87 ~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~---------------------~~~~~~~~~~~  145 (315)
T 2o2s_A           87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEV---------------------TKPLLETSRKG  145 (315)
T ss_dssp             TSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTT---------------------TSCGGGCCHHH
T ss_pred             chhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcC---------------------CCCcccCCHHH
Confidence                34443        6689999999999999999999999975310                     01223468899


Q ss_pred             HHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhh
Q 022357          133 AVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIA  212 (298)
Q Consensus       133 ~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (298)
                      |++.+++|+.|+++++++++|.|++  .|+||++||..+..+.                                     
T Consensus       146 ~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~-------------------------------------  186 (315)
T 2o2s_A          146 YLAASSNSAYSFVSLLQHFGPIMNE--GGSAVTLSYLAAERVV-------------------------------------  186 (315)
T ss_dssp             HHHHHHHHTHHHHHHHHHHSTTEEE--EEEEEEEEEGGGTSCC-------------------------------------
T ss_pred             HHHHHhhhhHHHHHHHHHHHHHHhc--CCEEEEEecccccccC-------------------------------------
Confidence            9999999999999999999999975  3899999998776432                                     


Q ss_pred             cCCCCCCC-chhhhHHHHHHHHHHHHHHhC---CCcEEEEeeCCeeecCCC
Q 022357          213 NRGWCPHS-SAYKVSKAVINAYTRILAKRY---PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       213 ~~~~~~~~-~~Y~~sK~al~~l~~~la~e~---~~i~vn~v~PG~v~t~~~  259 (298)
                           ++. ..|++||+|+++|+++++.|+   .||+||+|+||+|+|++.
T Consensus       187 -----~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~  232 (315)
T 2o2s_A          187 -----PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAA  232 (315)
T ss_dssp             -----TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHH
T ss_pred             -----CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhh
Confidence                 444 589999999999999999997   489999999999999864

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.98  E-value=5.1e-32  Score=237.66  Aligned_cols=208  Identities=20%  Similarity=0.216  Sum_probs=164.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++|++|||||+||||++++++|+++|++|++++|+++..    +++   +    .+.++ +|+  .++++++++.+  
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~---~----~~~~~-~D~--~~~~~~~~~~~--   79 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRS---G----HRYVV-CDL--RKDLDLLFEKV--   79 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHT---C----SEEEE-CCT--TTCHHHHHHHS--
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----Hhh---C----CeEEE-eeH--HHHHHHHHHHh--
Confidence            46789999999999999999999999999999999987322    222   1    26677 999  55677766654  


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                        .++|+||||||.....                       ++.+.+.+.|++.+++|+.+++++++.++|.|++++.|+
T Consensus        80 --~~iD~lv~~Ag~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~  134 (249)
T 1o5i_A           80 --KEVDILVLNAGGPKAG-----------------------FFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGR  134 (249)
T ss_dssp             --CCCSEEEECCCCCCCB-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             --cCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcE
Confidence              3899999999976432                       122357889999999999999999999999998777799


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          +....|++||+|++.|+++++.|+ 
T Consensus       135 iv~isS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~  172 (249)
T 1o5i_A          135 IVAITSFSVISPI------------------------------------------ENLYTSNSARMALTGFLKTLSFEVA  172 (249)
T ss_dssp             EEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEEcchHhcCCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhh
Confidence            9999998776443                                          567899999999999999999998 


Q ss_pred             -CCcEEEEeeCCeeecCCCCC----------------CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          242 -PKFCVNCVCPGFVKTDINFH----------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~----------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                       .+|+||+|+||+|+|++...                ..+.+|++.++..+.++.......+|..+..+
T Consensus       173 ~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vd  241 (249)
T 1o5i_A          173 PYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVD  241 (249)
T ss_dssp             GGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEEC
Confidence             58999999999999997421                01347888888877777654444555555443

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.98  E-value=6.4e-32  Score=242.75  Aligned_cols=221  Identities=18%  Similarity=0.203  Sum_probs=161.4

Q ss_pred             cCCCcEEEEeCCC--CchhHHHHHHHHHCCCEEEEEecCchh-----------hHHHHHHHHhcCCCCcceeEEEec---
Q 022357            3 EATKKYAVVTGSN--KGIGFETVRQLASKGITVVLTARDEKR-----------GLEAVEKLKASGVDPELLLFHQLD---   66 (298)
Q Consensus         3 ~~~~~~vlITGas--~gIG~a~a~~La~~G~~Vii~~r~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~D---   66 (298)
                      ++.+|++|||||+  +|||+++|++|+++|++|++++|++..           +++. +++.. +........+.+|   
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPD-GSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT-SSBCCEEEEEEECTTC
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcc-ccccccccccccceec
Confidence            3688999999999  999999999999999999999976421           1111 11110 1000012333333   


Q ss_pred             -----cC----c--------HHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhh
Q 022357           67 -----IS----D--------LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQT  129 (298)
Q Consensus        67 -----ls----~--------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (298)
                           ++    +        .++++++++++.+++|++|+||||||+....                     +.++.+.+
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~---------------------~~~~~~~~  141 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEV---------------------SKPLLETS  141 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTT---------------------TSCGGGCC
T ss_pred             cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccC---------------------CCCcccCC
Confidence                 33    2        6689999999999999999999999964310                     11223468


Q ss_pred             HHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhh
Q 022357          130 YELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG  209 (298)
Q Consensus       130 ~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (298)
                      .++|++.+++|+.|+++++++++|.|++  .|+||++||..+..+.                                  
T Consensus       142 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~----------------------------------  185 (297)
T 1d7o_A          142 RKGYLAAISASSYSFVSLLSHFLPIMNP--GGASISLTYIASERII----------------------------------  185 (297)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSCC----------------------------------
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHhcc--CceEEEEeccccccCC----------------------------------
Confidence            8999999999999999999999999975  3899999998776432                                  


Q ss_pred             hhhcCCCCCCC-chhhhHHHHHHHHHHHHHHhC---CCcEEEEeeCCeeecCCCCCC-----------------CCCChh
Q 022357          210 EIANRGWCPHS-SAYKVSKAVINAYTRILAKRY---PKFCVNCVCPGFVKTDINFHA-----------------GILSVE  268 (298)
Q Consensus       210 ~~~~~~~~~~~-~~Y~~sK~al~~l~~~la~e~---~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~  268 (298)
                              +.. ..|++||+|+++|+++++.|+   .||+||+|+||+|+|++....                 ...+|+
T Consensus       186 --------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  257 (297)
T 1d7o_A          186 --------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTAD  257 (297)
T ss_dssp             --------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHH
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHHHHhhccCCCCCCCCHH
Confidence                    444 689999999999999999997   389999999999999986431                 123666


Q ss_pred             hhhhhhhhhhccCCCCCcceEe
Q 022357          269 EGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       269 ~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      +.++..+.++.......+|..+
T Consensus       258 dvA~~v~~l~s~~~~~itG~~i  279 (297)
T 1d7o_A          258 EVGNAAAFLVSPLASAITGATI  279 (297)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHHHHHhCccccCCCCCEE
Confidence            6666666665533333344433

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.97  E-value=9.1e-32  Score=251.54  Aligned_cols=243  Identities=13%  Similarity=0.012  Sum_probs=169.3

Q ss_pred             CCCcEEEEeCCCCchhHH--HHHHHHHCCCEEEEEecCchhh------------HHHHHHHHhcCCCCcceeEEEeccCc
Q 022357            4 ATKKYAVVTGSNKGIGFE--TVRQLASKGITVVLTARDEKRG------------LEAVEKLKASGVDPELLLFHQLDISD   69 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a--~a~~La~~G~~Vii~~r~~~~~------------~~~~~~~~~~~~~~~~~~~~~~Dls~   69 (298)
                      ..+|++|||||++|||++  +++.|+++|++|++++|+....            +.+.+.++..+..   +.++++|+++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~Dvtd  134 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLV---AKNFIEDAFS  134 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCC---EEEEESCTTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCc---EEEEEeeCCC
Confidence            468999999999999999  9999999999999999976432            3333344444433   8899999999


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEccccCCccccccccc------cccc---ccccCccccchh--hhhhhhHHHHHhhhh
Q 022357           70 LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFA------DSGY---QITKGDAEVDWS--KVCYQTYELAVECLK  138 (298)
Q Consensus        70 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~  138 (298)
                      .++++++++.+.+++|+||+||||||......+.....      ..+.   ..+.+.....|.  .+...+.++|+..++
T Consensus       135 ~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~  214 (418)
T 4eue_A          135 NETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRK  214 (418)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHH
Confidence            99999999999999999999999999752211000000      0000   000000011111  123458899999999


Q ss_pred             hhceeHH-HHHHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCC
Q 022357          139 TNYYGTK-QTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC  217 (298)
Q Consensus       139 ~N~~~~~-~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (298)
                      +|..+.| .+++++.+.+...++|+||++||+.+..+.                                          
T Consensus       215 vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~------------------------------------------  252 (418)
T 4eue_A          215 VMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY------------------------------------------  252 (418)
T ss_dssp             HHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGT------------------------------------------
T ss_pred             HhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCC------------------------------------------
Confidence            9999998 778887754433456899999998876543                                          


Q ss_pred             CCC--chhhhHHHHHHHHHHHHHHhC-C--CcEEEEeeCCeeecCCCCCCCCCChh-hhhhhhhhhhccCCCCCcceEec
Q 022357          218 PHS--SAYKVSKAVINAYTRILAKRY-P--KFCVNCVCPGFVKTDINFHAGILSVE-EGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       218 ~~~--~~Y~~sK~al~~l~~~la~e~-~--~i~vn~v~PG~v~t~~~~~~~~~~~~-~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      +.+  ..|++||+|+.+|+++||.|+ +  |||||+|+||+|.|++....+..... .....++++...+++......+|
T Consensus       253 p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L  332 (418)
T 4eue_A          253 KIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERM  332 (418)
T ss_dssp             TTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred             CccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHH
Confidence            445  899999999999999999999 4  79999999999999987554321111 11222455555555444443333

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.97  E-value=4.1e-32  Score=238.46  Aligned_cols=223  Identities=18%  Similarity=0.168  Sum_probs=153.5

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      |++|||||+||||++++++|+++|++|++++|+.+++..               . +++|+++.++++++++.+   .++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------------~-~~~Dl~~~~~v~~~~~~~---~~~   62 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------------D-LSTAEGRKQAIADVLAKC---SKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------C-TTSHHHHHHHHHHHHTTC---TTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------------c-cccCCCCHHHHHHHHHHh---CCC
Confidence            689999999999999999999999999999998764321               1 578999999988877632   289


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+||||||.....                              +.+++.+++|+.++++++++++|.|++++.|+||++
T Consensus        63 id~lv~~Ag~~~~~------------------------------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~i  112 (257)
T 1fjh_A           63 MDGLVLCAGLGPQT------------------------------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVI  112 (257)
T ss_dssp             CSEEEECCCCCTTC------------------------------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEE
T ss_pred             CCEEEECCCCCCCc------------------------------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEE
Confidence            99999999975311                              126788999999999999999999988777999999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CCc
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKF  244 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~i  244 (298)
                      ||..+........         .. ...   +........ ........+.+....|++||+|++.|+++++.++  .+|
T Consensus       113 sS~~~~~~~~~~~---------~~-~~~---~~~~~~~~~-~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi  178 (257)
T 1fjh_A          113 SSVASAHLAFDKN---------PL-ALA---LEAGEEAKA-RAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGV  178 (257)
T ss_dssp             CCGGGGSSCGGGC---------TT-HHH---HHHTCHHHH-HHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTC
T ss_pred             CChhhhccccccc---------hh-hhh---hcccchhhh-hhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCe
Confidence            9988763211000         00 000   000000000 0000001122346789999999999999999998  689


Q ss_pred             EEEEeeCCeeecCCCCCC------------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          245 CVNCVCPGFVKTDINFHA------------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~~------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      +||+|+||+|+|++....                  ...+|++.++..+.++..+....+|..+..
T Consensus       179 ~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~v  244 (257)
T 1fjh_A          179 RLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVI  244 (257)
T ss_dssp             EEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             EEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEE
Confidence            999999999999875421                  135677788777777765444455555543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=5.1e-31  Score=229.01  Aligned_cols=208  Identities=20%  Similarity=0.138  Sum_probs=167.4

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +|++|||||+||||++++++|+++|++|++++|+.+ .+              .+.++++|+++.++++++++++ +.++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~--------------~~~~~~~D~~~~~~~~~~~~~~-~~~~   65 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GE--------------DLIYVEGDVTREEDVRRAVARA-QEEA   65 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SS--------------SSEEEECCTTCHHHHHHHHHHH-HHHS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-cc--------------ceEEEeCCCCCHHHHHHHHHHH-HhhC
Confidence            689999999999999999999999999999999864 11              1678999999999999999999 8889


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC---C--
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---S--  160 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~--  160 (298)
                      ++|++|||||........+.                   ..+.+.+.+++.+++|+.+++.++++++|.|++++   .  
T Consensus        66 ~~d~li~~ag~~~~~~~~~~-------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  126 (242)
T 1uay_A           66 PLFAVVSAAGVGLAEKILGK-------------------EGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQ  126 (242)
T ss_dssp             CEEEEEECCCCCCCCCSBCS-------------------SSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSC
T ss_pred             CceEEEEcccccCccccccc-------------------ccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            99999999998654321110                   00124558889999999999999999999998654   3  


Q ss_pred             -CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          161 -PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       161 -g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                       |+||++||..+..+.                                          +....|++||+|++.|+++++.
T Consensus       127 ~~~iv~~sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~  164 (242)
T 1uay_A          127 RGVIVNTASVAAFEGQ------------------------------------------IGQAAYAASKGGVVALTLPAAR  164 (242)
T ss_dssp             SEEEEEECCTHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEeCChhhccCC------------------------------------------CCCchhhHHHHHHHHHHHHHHH
Confidence             399999998765432                                          5578999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCC----------------CCCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFH----------------AGILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~----------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      ++  .+|+||+|+||+|.|++...                ..+.++++.++..+.++..  ...+|..+..
T Consensus       165 e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v  233 (242)
T 1uay_A          165 ELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--PMLNGEVVRL  233 (242)
T ss_dssp             HHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC--TTCCSCEEEE
T ss_pred             HHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC--CCCCCcEEEE
Confidence            98  48999999999999986422                1234788999888887765  3344554443

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.96  E-value=1.6e-29  Score=267.06  Aligned_cols=212  Identities=21%  Similarity=0.256  Sum_probs=167.1

Q ss_pred             CcCCCcEEEEeCCCCc-hhHHHHHHHHHCCCEEEEE-ecCchhhHHHHHHHHhc-CCCCcceeEEEeccCcHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKG-IGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKAS-GVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         2 ~~~~~~~vlITGas~g-IG~a~a~~La~~G~~Vii~-~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      +.+.+|++|||||++| ||+++|++|+++|++|+++ .|+.+++.+..+++... ......+.+++||+++.++++++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            3578999999999998 9999999999999999998 57777777776666432 2122348899999999999999999


Q ss_pred             HHHHh-----cC-CccEEEEccccCCcccccccccccccccccCccccchhhhhhhh--HHHHHhhhhhhceeHHHHHHH
Q 022357           79 FIKTQ-----FG-KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQT--YELAVECLKTNYYGTKQTCEA  150 (298)
Q Consensus        79 ~~~~~-----~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~N~~~~~~l~~~  150 (298)
                      .+.+.     +| ++|+||||||+.....                      ++.+.+  .+.|++.+++|+.+++.+++.
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~----------------------~l~d~t~~~e~~~~v~~vNv~g~~~l~~a  808 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGI----------------------ELEHIDSKSEFAHRIMLTNILRMMGCVKK  808 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSB----------------------CGGGCCHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCC----------------------ChhhCCcchHHHHHHHHHHHHHHHHHHHH
Confidence            99988     66 9999999999864320                      112234  789999999999999999999


Q ss_pred             H--hhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHH
Q 022357          151 L--IPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKA  228 (298)
Q Consensus       151 ~--~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  228 (298)
                      +  +|.|++++.|+||++||..+..+                                            +...|++||+
T Consensus       809 ~~~lp~m~~~~~G~IVnISS~ag~~g--------------------------------------------g~~aYaASKA  844 (1887)
T 2uv8_A          809 QKSARGIETRPAQVILPMSPNHGTFG--------------------------------------------GDGMYSESKL  844 (1887)
T ss_dssp             HHHTTTCCSCCEEEEEEECSCTTCSS--------------------------------------------CBTTHHHHHH
T ss_pred             HHhhhhhhhCCCCEEEEEcChHhccC--------------------------------------------CCchHHHHHH
Confidence            8  89998776789999999877532                                            3578999999


Q ss_pred             HHHHH-HHHHHHhC-CCcEEEEeeCCeee-cCCCCCC------------CCCChhhhhhhhhhhhc
Q 022357          229 VINAY-TRILAKRY-PKFCVNCVCPGFVK-TDINFHA------------GILSVEEGAESPVKLAL  279 (298)
Q Consensus       229 al~~l-~~~la~e~-~~i~vn~v~PG~v~-t~~~~~~------------~~~~~~~~a~~~~~~~~  279 (298)
                      |+.+| ++.++.++ +.|+||+|+||+|+ |+|....            ...+|++.+...++++.
T Consensus       845 AL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~~~~~plr~~sPEEVA~avlfLaS  910 (1887)
T 2uv8_A          845 SLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQKEMAFNLLGLLT  910 (1887)
T ss_dssp             HGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHHHHTTSCCCEEHHHHHHHHHGGGS
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHHHHhcCCCCCCHHHHHHHHHHHhC
Confidence            99999 89999988 35999999999999 7875321            12356666666665554

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.96  E-value=9.5e-29  Score=209.35  Aligned_cols=179  Identities=15%  Similarity=0.143  Sum_probs=152.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +++||||+||||++++++|+ +|++|++++|+..                    .+++|+++.++++++++.+    +++
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~--------------------~~~~D~~~~~~~~~~~~~~----~~~   59 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG--------------------DVTVDITNIDSIKKMYEQV----GKV   59 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS--------------------SEECCTTCHHHHHHHHHHH----CCE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc--------------------ceeeecCCHHHHHHHHHHh----CCC
Confidence            79999999999999999999 9999999999863                    3689999999999888765    789


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+||||||.....+                       +.+.+.+.+++.+++|+.+++.+++++.|.|++  .++||++|
T Consensus        60 d~vi~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~s  114 (202)
T 3d7l_A           60 DAIVSATGSATFSP-----------------------LTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTT  114 (202)
T ss_dssp             EEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEEC
T ss_pred             CEEEECCCCCCCCC-----------------------hhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEc
Confidence            99999999764321                       223577889999999999999999999999964  38999999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-CCcEE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKFCV  246 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-~~i~v  246 (298)
                      |..+..+.                                          +....|++||++++.+++.++.++ .+|++
T Consensus       115 S~~~~~~~------------------------------------------~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v  152 (202)
T 3d7l_A          115 GIMMEDPI------------------------------------------VQGASAAMANGAVTAFAKSAAIEMPRGIRI  152 (202)
T ss_dssp             CGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHTTSCSTTCEE
T ss_pred             chhhcCCC------------------------------------------CccHHHHHHHHHHHHHHHHHHHHccCCeEE
Confidence            97765432                                          557899999999999999999998 58999


Q ss_pred             EEeeCCeeecCCCC------CCCCCChhhhhhhhhhhh
Q 022357          247 NCVCPGFVKTDINF------HAGILSVEEGAESPVKLA  278 (298)
Q Consensus       247 n~v~PG~v~t~~~~------~~~~~~~~~~a~~~~~~~  278 (298)
                      |.|+||++.|++..      ...+.++++.++..+..+
T Consensus       153 ~~v~pg~v~~~~~~~~~~~~~~~~~~~~dva~~~~~~~  190 (202)
T 3d7l_A          153 NTVSPNVLEESWDKLEPFFEGFLPVPAAKVARAFEKSV  190 (202)
T ss_dssp             EEEEECCBGGGHHHHGGGSTTCCCBCHHHHHHHHHHHH
T ss_pred             EEEecCccCCchhhhhhhccccCCCCHHHHHHHHHHhh
Confidence            99999999998632      134578999999877666

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.96  E-value=4.3e-29  Score=211.99  Aligned_cols=193  Identities=21%  Similarity=0.200  Sum_probs=156.4

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      |++|||||+||||++++++|+++  +|++++|++++++...+++.        ..++++|+++.++++++++.    +++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~--------~~~~~~D~~~~~~~~~~~~~----~~~   66 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG--------ARALPADLADELEAKALLEE----AGP   66 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT--------CEECCCCTTSHHHHHHHHHH----HCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc--------CcEEEeeCCCHHHHHHHHHh----cCC
Confidence            57999999999999999999998  99999999877666655543        16788999999999998876    689


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+||||||.....+.                       .+.+.+++++.+++|+.+++++++++.    +++.++||++
T Consensus        67 id~vi~~ag~~~~~~~-----------------------~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~  119 (207)
T 2yut_A           67 LDLLVHAVGKAGRASV-----------------------REAGRDLVEEMLAAHLLTAAFVLKHAR----FQKGARAVFF  119 (207)
T ss_dssp             EEEEEECCCCCCCBCS-----------------------CC---CHHHHHHHHHHHHHHHHHHHCC----EEEEEEEEEE
T ss_pred             CCEEEECCCcCCCCCh-----------------------hhCCHHHHHHHHHHHhHHHHHHHHHHH----hcCCcEEEEE
Confidence            9999999997643321                       124667888999999999999999982    2345899999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CCc
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKF  244 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~i  244 (298)
                      ||..+..+.                                          +....|++||++++.|++.++.++  .+|
T Consensus       120 sS~~~~~~~------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi  157 (207)
T 2yut_A          120 GAYPRYVQV------------------------------------------PGFAAYAAAKGALEAYLEAARKELLREGV  157 (207)
T ss_dssp             CCCHHHHSS------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             cChhhccCC------------------------------------------CCcchHHHHHHHHHHHHHHHHHHHhhhCC
Confidence            998765432                                          557899999999999999999998  599


Q ss_pred             EEEEeeCCeeecCCCCC-----CCCCChhhhhhhhhhhhccCC
Q 022357          245 CVNCVCPGFVKTDINFH-----AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~-----~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      ++++|+||++.|++...     ..+.++++.++..+..+..+.
T Consensus       158 ~v~~v~pg~v~t~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          158 HLVLVRLPAVATGLWAPLGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             EEEEECCCCBCSGGGGGGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             EEEEEecCcccCCCccccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999999987432     235789999999988887554

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.96  E-value=3.4e-29  Score=241.55  Aligned_cols=206  Identities=14%  Similarity=0.060  Sum_probs=168.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCE-EEEE-ecCc-------------hhhHHHHHHHHhcCCCCcceeEEEeccCc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLT-ARDE-------------KRGLEAVEKLKASGVDPELLLFHQLDISD   69 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~-Vii~-~r~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~Dls~   69 (298)
                      .++++|||||+||||+++|++|+++|++ |+++ +|+.             +.+.+..+++...+..   +.+++||++|
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~---v~~~~~Dvtd  326 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGAT---ATVVTCDLTD  326 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCE---EEEEECCTTS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCE---EEEEECCCCC
Confidence            5789999999999999999999999997 6777 8883             4567777788776543   8999999999


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHH
Q 022357           70 LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE  149 (298)
Q Consensus        70 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  149 (298)
                      .++++++++.+. .+++||+||||||+.....                       +.+.+.+.+++.+++|+.|++++.+
T Consensus       327 ~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~-----------------------~~~~~~~~~~~v~~~nv~g~~~L~~  382 (525)
T 3qp9_A          327 AEAAARLLAGVS-DAHPLSAVLHLPPTVDSEP-----------------------LAATDADALARVVTAKATAALHLDR  382 (525)
T ss_dssp             HHHHHHHHHTSC-TTSCEEEEEECCCCCCCCC-----------------------TTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-hcCCCcEEEECCcCCCCCc-----------------------hhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999988 7899999999999875432                       2236889999999999999999999


Q ss_pred             HHhhhhccCC-CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHH
Q 022357          150 ALIPLLELSD-SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKA  228 (298)
Q Consensus       150 ~~~~~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  228 (298)
                      ++.+.|++++ .++||++||+.+..+.                                          +++..|+++|+
T Consensus       383 ~~~~~~~~~~~~~~iV~~SS~a~~~g~------------------------------------------~g~~~YaaaKa  420 (525)
T 3qp9_A          383 LLREAAAAGGRPPVLVLFSSVAAIWGG------------------------------------------AGQGAYAAGTA  420 (525)
T ss_dssp             HHHHTC----CCCEEEEEEEGGGTTCC------------------------------------------TTCHHHHHHHH
T ss_pred             HhccccccCCCCCEEEEECCHHHcCCC------------------------------------------CCCHHHHHHHH
Confidence            9999998765 6899999999988664                                          77899999999


Q ss_pred             HHHHHHHHHHHhCCCcEEEEeeCCeeecCCCCC-----------CCCCChhhhhhhhhhhhccC
Q 022357          229 VINAYTRILAKRYPKFCVNCVCPGFVKTDINFH-----------AGILSVEEGAESPVKLALLP  281 (298)
Q Consensus       229 al~~l~~~la~e~~~i~vn~v~PG~v~t~~~~~-----------~~~~~~~~~a~~~~~~~~~~  281 (298)
                      ++++|++.++.  .||++++|+||+++|+|...           ...++++++++.....+...
T Consensus       421 ~l~~lA~~~~~--~gi~v~sI~pG~~~tgm~~~~~~~~~~~~~g~~~l~pee~a~~l~~~l~~~  482 (525)
T 3qp9_A          421 FLDALAGQHRA--DGPTVTSVAWSPWEGSRVTEGATGERLRRLGLRPLAPATALTALDTALGHG  482 (525)
T ss_dssp             HHHHHHTSCCS--SCCEEEEEEECCBTTSGGGSSHHHHHHHHTTBCCBCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHh--CCCCEEEEECCccccccccchhhHHHHHhcCCCCCCHHHHHHHHHHHHhCC
Confidence            99998653322  49999999999999998732           13478899988887777643

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.96  E-value=6.9e-30  Score=262.39  Aligned_cols=191  Identities=21%  Similarity=0.262  Sum_probs=158.1

Q ss_pred             cCCCcEEEEeCCCCc-hhHHHHHHHHHCCCEEEEE-ecCchhhHHHHHHHHhc-CCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKG-IGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKAS-GVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         3 ~~~~~~vlITGas~g-IG~a~a~~La~~G~~Vii~-~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      .+.+|++|||||++| ||+++|++|+++|++|+++ .|+.+++.+..+++... .....++.++++|+++.++++++++.
T Consensus       473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~  552 (1688)
T 2pff_A          473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  552 (1688)
T ss_dssp             CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred             ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence            367899999999998 9999999999999999998 57777776666666432 11123488999999999999999999


Q ss_pred             HHHh-----cC-CccEEEEccccCCcc-cccccccccccccccCccccchhhhhhhh--HHHHHhhhhhhceeHHHHHHH
Q 022357           80 IKTQ-----FG-KLDILANNAGIASVK-FDMDAFADSGYQITKGDAEVDWSKVCYQT--YELAVECLKTNYYGTKQTCEA  150 (298)
Q Consensus        80 ~~~~-----~g-~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~N~~~~~~l~~~  150 (298)
                      +.+.     +| ++|+||||||+.... +.                       .+.+  .+.|++.+++|+.+++.+++.
T Consensus       553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l-----------------------~dlt~s~Ed~~rv~~VNL~G~~~Ltqa  609 (1688)
T 2pff_A          553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIEL-----------------------EHIDSKSEFAHRIMLTNILRMMGCVKK  609 (1688)
T ss_dssp             HHSCTTSSSCCCCCCEEECCCCCCCCSBCS-----------------------SSCTTHHHHHHHHTTHHHHHHHHHHHH
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCCh-----------------------hhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9988     77 999999999986432 11                       1234  789999999999999999999


Q ss_pred             H--hhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHH
Q 022357          151 L--IPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKA  228 (298)
Q Consensus       151 ~--~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  228 (298)
                      +  +|.|++++.|+||++||..+..+                                            +...|++||+
T Consensus       610 a~~lp~M~krggGrIVnISSiAG~~G--------------------------------------------g~saYaASKA  645 (1688)
T 2pff_A          610 QKSARGIETRPAQVILPMSPNHGTFG--------------------------------------------GDGMYSESKL  645 (1688)
T ss_dssp             HHHHHTCTTSCEEECCCCCSCTTTSS--------------------------------------------CBTTHHHHHH
T ss_pred             HHhChHHHhCCCCEEEEEEChHhccC--------------------------------------------CchHHHHHHH
Confidence            9  88998776689999999877532                                            3578999999


Q ss_pred             HHHHH-HHHHHHhC-CCcEEEEeeCCeee-cCCCC
Q 022357          229 VINAY-TRILAKRY-PKFCVNCVCPGFVK-TDINF  260 (298)
Q Consensus       229 al~~l-~~~la~e~-~~i~vn~v~PG~v~-t~~~~  260 (298)
                      |+.+| ++.++.++ +.|+||+|+||+|+ |++..
T Consensus       646 AL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~  680 (1688)
T 2pff_A          646 SLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMS  680 (1688)
T ss_dssp             HHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSC
T ss_pred             HHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccC
Confidence            99999 77778877 45999999999999 77753

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.95  E-value=1.7e-27  Score=251.13  Aligned_cols=211  Identities=20%  Similarity=0.208  Sum_probs=168.5

Q ss_pred             cCCCcEEEEeCCCCc-hhHHHHHHHHHCCCEEEEEe-cCchhhHHHHHHHHh-cCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKG-IGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKA-SGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         3 ~~~~~~vlITGas~g-IG~a~a~~La~~G~~Vii~~-r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      .+.+|++|||||++| ||+++|++|+++|++|++++ |+.+.+.+..+++.. .......+.+++||+++.++++++++.
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            467899999999999 99999999999999999985 666666666655532 221223488999999999999999999


Q ss_pred             HHHh---cC-CccEEEEccccCCcccccccccccccccccCccccchhhhhhhh--HHHHHhhhhhhceeHHHHHHH--H
Q 022357           80 IKTQ---FG-KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQT--YELAVECLKTNYYGTKQTCEA--L  151 (298)
Q Consensus        80 ~~~~---~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~N~~~~~~l~~~--~  151 (298)
                      +.+.   +| +||+||||||+.....                      ++.+.+  .+.|++.+++|+.|++.+++.  +
T Consensus       729 i~~~~~~~G~~IDiLVnNAGi~~~~~----------------------~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~  786 (1878)
T 2uv9_A          729 IYDTKNGLGWDLDYVVPFAAIPENGR----------------------EIDSIDSKSELAHRIMLTNLLRLLGAIKTQKK  786 (1878)
T ss_dssp             HHCSSSSCCCCCSEEEECCCCCCTTC----------------------CTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             HHHhhcccCCCCcEEEeCcccccCCC----------------------ChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998   89 9999999999864320                      111235  789999999999999999987  7


Q ss_pred             hhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHH
Q 022357          152 IPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVIN  231 (298)
Q Consensus       152 ~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~  231 (298)
                      +|.|.+++.|+||++||..+..+                                            +...|++||+|+.
T Consensus       787 lp~M~~~~~G~IVnISS~ag~~g--------------------------------------------g~~aYaASKAAL~  822 (1878)
T 2uv9_A          787 ERGYETRPAQVILPLSPNHGTFG--------------------------------------------NDGLYSESKLALE  822 (1878)
T ss_dssp             HHTCCSCCEEECCEECSCSSSSS--------------------------------------------CCSSHHHHHHHHT
T ss_pred             hHHHHhCCCCEEEEEcchhhccC--------------------------------------------CchHHHHHHHHHH
Confidence            78887766689999999887642                                            3578999999999


Q ss_pred             HHHHHHHHh-C-CCcEEEEeeCCeee-cCCCCC------------CCCCChhhhhhhhhhhhc
Q 022357          232 AYTRILAKR-Y-PKFCVNCVCPGFVK-TDINFH------------AGILSVEEGAESPVKLAL  279 (298)
Q Consensus       232 ~l~~~la~e-~-~~i~vn~v~PG~v~-t~~~~~------------~~~~~~~~~a~~~~~~~~  279 (298)
                      +|++.++.+ + ++|+||+|+||+|+ |+|...            ....+|++.+...+.++.
T Consensus       823 aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~~~~~~plr~~sPeEVA~avlfLaS  885 (1878)
T 2uv9_A          823 TLFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAEGVEKLGVRTFSQQEMAFNLLGLMA  885 (1878)
T ss_dssp             THHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHHHHHTTTCCCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHHHHHhcCCCCCCHHHHHHHHHHHhC
Confidence            999887766 5 45999999999999 987532            123477777777766654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.94  E-value=9.5e-28  Score=209.58  Aligned_cols=221  Identities=21%  Similarity=0.136  Sum_probs=158.2

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      |++|||||+||||++++++|+++|++|++++|+.++...                .+.+|+++.++++++++.+   .++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------------~~~~D~~~~~~~~~~~~~~---~~~   62 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA----------------DLSTPGGRETAVAAVLDRC---GGV   62 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------------CTTSHHHHHHHHHHHHHHH---TTC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc----------------cccCCcccHHHHHHHHHHc---CCC
Confidence            589999999999999999999999999999998764211                1568999999988887754   368


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+||||||....                              .+.+++.+++|+.+++++++++++.|++++.++||++
T Consensus        63 ~d~vi~~Ag~~~~------------------------------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~  112 (255)
T 2dkn_A           63 LDGLVCCAGVGVT------------------------------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIV  112 (255)
T ss_dssp             CSEEEECCCCCTT------------------------------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEE
T ss_pred             ccEEEECCCCCCc------------------------------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEE
Confidence            9999999997531                              1225678999999999999999999987777899999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CCc
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKF  244 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~i  244 (298)
                      ||..+..+.........  +..............              ..++....|+.||++++.+++.++.++  .++
T Consensus       113 sS~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--------------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi  176 (255)
T 2dkn_A          113 GSIAATQPGAAELPMVE--AMLAGDEARAIELAE--------------QQGQTHLAYAGSKYAVTCLARRNVVDWAGRGV  176 (255)
T ss_dssp             CCGGGGSTTGGGCHHHH--HHHHTCHHHHHHHHH--------------HHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTC
T ss_pred             eccccccccccccchhh--hhcccchhhhhhhcc--------------ccCCcchhHHHHHHHHHHHHHHHHHHHhhcCc
Confidence            99887654311000000  000000000000000              001335789999999999999999997  699


Q ss_pred             EEEEeeCCeeecCCCCC------------------CCCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          245 CVNCVCPGFVKTDINFH------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      ++++|+||.|.|++...                  ..+.++++.++..+.++..+.....|..|..
T Consensus       177 ~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  242 (255)
T 2dkn_A          177 RLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQASFIHGSVLFV  242 (255)
T ss_dssp             EEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             EEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCcccceeeEEEe
Confidence            99999999999975321                  1246788888888888765443444544433

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.94  E-value=1.6e-26  Score=221.01  Aligned_cols=200  Identities=19%  Similarity=0.160  Sum_probs=161.8

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCch---hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEK---RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++++|||||+||||++++++|+++|+ +|++++|+..   ...+..+++...+..   +.++.||++|.++++++++.+.
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~---v~~~~~Dvtd~~~v~~~~~~i~  315 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVR---VTIAACDAADREALAALLAELP  315 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCE---EEEEECCTTCHHHHHHHHHTCC
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCe---EEEEEccCCCHHHHHHHHHHHH
Confidence            48999999999999999999999999 7899999743   456677777776543   8999999999999999999887


Q ss_pred             HhcCCccEEEEccccC-CcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           82 TQFGKLDILANNAGIA-SVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      +. +++|+||||||+. ...                       .+.+.+.+.+++.+++|+.|++++.+.+.+.+    .
T Consensus       316 ~~-g~ld~vVh~AGv~~~~~-----------------------~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~----~  367 (496)
T 3mje_A          316 ED-APLTAVFHSAGVAHDDA-----------------------PVADLTLGQLDALMRAKLTAARHLHELTADLD----L  367 (496)
T ss_dssp             TT-SCEEEEEECCCCCCSCC-----------------------CTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC----C
T ss_pred             Hh-CCCeEEEECCcccCCCC-----------------------CcccCCHHHHHHHHHHHHHHHHHHHHHhhccC----C
Confidence            66 7899999999986 322                       12236889999999999999999999988753    4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||+.+..+.                                          +++..|+++|+++.+|++.++. 
T Consensus       368 ~~iV~~SS~a~~~g~------------------------------------------~g~~~YaAaKa~ldala~~~~~-  404 (496)
T 3mje_A          368 DAFVLFSSGAAVWGS------------------------------------------GGQPGYAAANAYLDALAEHRRS-  404 (496)
T ss_dssp             SEEEEEEEHHHHTTC------------------------------------------TTCHHHHHHHHHHHHHHHHHHH-
T ss_pred             CEEEEEeChHhcCCC------------------------------------------CCcHHHHHHHHHHHHHHHHHHh-
Confidence            799999998887654                                          7789999999999999987664 


Q ss_pred             CCCcEEEEeeCCeeecCCCCC-C-----------CCCChhhhhhhhhhhhcc
Q 022357          241 YPKFCVNCVCPGFVKTDINFH-A-----------GILSVEEGAESPVKLALL  280 (298)
Q Consensus       241 ~~~i~vn~v~PG~v~t~~~~~-~-----------~~~~~~~~a~~~~~~~~~  280 (298)
                       .||++|+|+||++.++.... .           ..++++++.+.....+..
T Consensus       405 -~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~g~~~l~pe~~~~~l~~~l~~  455 (496)
T 3mje_A          405 -LGLTASSVAWGTWGEVGMATDPEVHDRLVRQGVLAMEPEHALGALDQMLEN  455 (496)
T ss_dssp             -TTCCCEEEEECEESSSCC------CHHHHHTTEEEECHHHHHHHHHHHHHH
T ss_pred             -cCCeEEEEECCcccCCccccChHHHHHHHhcCCCCCCHHHHHHHHHHHHcC
Confidence             49999999999997654321 1           135777777666555543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.94  E-value=2.8e-27  Score=260.29  Aligned_cols=227  Identities=18%  Similarity=0.148  Sum_probs=160.2

Q ss_pred             cCCCcEEEEeCCCCc-hhHHHHHHHHHCCCEEEEEecCchh-----hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHH
Q 022357            3 EATKKYAVVTGSNKG-IGFETVRQLASKGITVVLTARDEKR-----GLEAVEKLKASGVDPELLLFHQLDISDLASVSSL   76 (298)
Q Consensus         3 ~~~~~~vlITGas~g-IG~a~a~~La~~G~~Vii~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~   76 (298)
                      .+.+|++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++...+   ..+.++++|+++.++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G---~~~~~v~~Dvtd~~~v~~l 2209 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFD---ATLWVVPANMASYSDIDKL 2209 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTT---CEEEEEECCTTCHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcC---CeEEEEEecCCCHHHHHHH
Confidence            378999999999999 9999999999999999999998765     444555544333   2488999999999999999


Q ss_pred             HHHHHH----hcCCccEEEEccccC----CcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHH
Q 022357           77 ADFIKT----QFGKLDILANNAGIA----SVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTC  148 (298)
Q Consensus        77 ~~~~~~----~~g~id~lv~nAg~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  148 (298)
                      ++.+.+    .+|++|+||||||+.    ........           ....+|.       ..++..+++|+.+++.++
T Consensus      2210 v~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~-----------~~~e~~~-------~~~e~~~~vnl~~~~~l~ 2271 (3089)
T 3zen_D         2210 VEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVA-----------GDMSEVG-------SRAEMEMKVLLWAVQRLI 2271 (3089)
T ss_dssp             HHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCC-----------CTTSCTT-------SHHHHHHHHHTHHHHHHH
T ss_pred             HHHHHhhhhhhcCCCCEEEECCCcccccCcccccccC-----------CCHHHHH-------HHHHHHHHHHHHHHHHHH
Confidence            999998    899999999999972    11100000           0111121       123345899999999999


Q ss_pred             HHHhhhhccCCCCc----EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhh
Q 022357          149 EALIPLLELSDSPR----LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYK  224 (298)
Q Consensus       149 ~~~~~~~~~~~~g~----iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  224 (298)
                      +.+.|.|+.++.++    |+..|+..+.                                            +++..+|+
T Consensus      2272 ~~~~~~m~~~~~g~~~~ii~~~ss~~g~--------------------------------------------~g~~~aYs 2307 (3089)
T 3zen_D         2272 SGLSKIGAERDIASRLHVVLPGSPNRGM--------------------------------------------FGGDGAYG 2307 (3089)
T ss_dssp             HHHHHHHHHTTCCCCEEEEEEECSSTTS--------------------------------------------CSSCSSHH
T ss_pred             HHHHHHHHHcCCCceeEEEEECCccccc--------------------------------------------CCCchHHH
Confidence            99999998765432    2223332211                                            13456899


Q ss_pred             hHHHHHHHHHHHHHHh--C-CCcEEEEeeCCeee-cCCCCCCCCCChhhhhhhhhhhhccCCCCCcceEeccCccC
Q 022357          225 VSKAVINAYTRILAKR--Y-PKFCVNCVCPGFVK-TDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEA  296 (298)
Q Consensus       225 ~sK~al~~l~~~la~e--~-~~i~vn~v~PG~v~-t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a  296 (298)
                      +||+|+.+|+|+||.|  + ++|+||+|+||+|+ |++..... ...+.....+.+ ..+|++++...+||+|+.+
T Consensus      2308 ASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~-~~~~~~~~~~~r-~~~PeEIA~avlfLaS~~a 2381 (3089)
T 3zen_D         2308 EAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQND-AIVSAVEEAGVT-TYTTDEMAAMLLDLCTVET 2381 (3089)
T ss_dssp             HHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTT-TTHHHHGGGSCB-CEEHHHHHHHHHHTTSHHH
T ss_pred             HHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccch-hHHHHHHhcCCC-CCCHHHHHHHHHHHhChhh
Confidence            9999999999999999  6 68999999999999 66543221 111212222222 2256666666677766553

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=3.9e-26  Score=201.90  Aligned_cols=205  Identities=17%  Similarity=0.061  Sum_probs=157.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++|++|||||+||||++++++|+++|++|++++|++.+..         .   ..+.++.+|+++.++++++++      
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~---~~~~~~~~Dl~d~~~~~~~~~------   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------G---PNEECVQCDLADANAVNAMVA------   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------C---TTEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------C---CCCEEEEcCCCCHHHHHHHHc------
Confidence            3589999999999999999999999999999999976432         1   238999999999999988876      


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       ++|+||||||...                               .+.+++.+++|+.|++++++++.+    ++.++||
T Consensus        64 -~~D~vi~~Ag~~~-------------------------------~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv  107 (267)
T 3rft_A           64 -GCDGIVHLGGISV-------------------------------EKPFEQILQGNIIGLYNLYEAARA----HGQPRIV  107 (267)
T ss_dssp             -TCSEEEECCSCCS-------------------------------CCCHHHHHHHHTHHHHHHHHHHHH----TTCCEEE
T ss_pred             -CCCEEEECCCCcC-------------------------------cCCHHHHHHHHHHHHHHHHHHHHH----cCCCEEE
Confidence             7899999999742                               123467799999999999999954    3568999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCc
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF  244 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i  244 (298)
                      ++||..+......                              ...+.+..+......|+.||++.+.+++.++.++ ++
T Consensus       108 ~~SS~~~~g~~~~------------------------------~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~-g~  156 (267)
T 3rft_A          108 FASSNHTIGYYPQ------------------------------TERLGPDVPARPDGLYGVSKCFGENLARMYFDKF-GQ  156 (267)
T ss_dssp             EEEEGGGGTTSBT------------------------------TSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CC
T ss_pred             EEcchHHhCCCCC------------------------------CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh-CC
Confidence            9999877632100                              0112233444667899999999999999999886 88


Q ss_pred             EEEEeeCCeeecCCCCCC---CCCChhhhhhhhhhhhccCCCCCcceEeccCcc
Q 022357          245 CVNCVCPGFVKTDINFHA---GILSVEEGAESPVKLALLPDGGPTGRFFLRKEE  295 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~~---~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~  295 (298)
                      ++++|.||.|.+++....   .+..+++.++.....+. +++.....+|+.++.
T Consensus       157 ~~~~vr~~~v~~~~~~~~~~~~~~~~~d~a~~~~~~~~-~~~~~~~~~~~~s~~  209 (267)
T 3rft_A          157 ETALVRIGSCTPEPNNYRMLSTWFSHDDFVSLIEAVFR-APVLGCPVVWGASAN  209 (267)
T ss_dssp             CEEEEEECBCSSSCCSTTHHHHBCCHHHHHHHHHHHHH-CSCCCSCEEEECCCC
T ss_pred             eEEEEEeecccCCCCCCCceeeEEcHHHHHHHHHHHHh-CCCCCceEEEEeCCC
Confidence            888999998888765432   35678888776555544 555566677777664

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.93  E-value=5.4e-26  Score=228.88  Aligned_cols=177  Identities=20%  Similarity=0.261  Sum_probs=151.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHH-HCCC-EEEEEecC---chhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLA-SKGI-TVVLTARD---EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La-~~G~-~Vii~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      .++++|||||++|||+++|+.|+ ++|+ +|++++|+   .+..++.+++++..+..   +.+++||++|.+++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~---v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAE---VSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCE---EEEEECCTTCHHHHHHHHHT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCc---EEEEEeecCCHHHHHHHHHH
Confidence            57899999999999999999999 7999 59999998   44567778888776544   89999999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+.+ +||+||||||+....                       .+.+++.++|+..+++|+.|++++.+++.|.|    
T Consensus       606 ~~~~~-~id~lVnnAGv~~~~-----------------------~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l----  657 (795)
T 3slk_A          606 IPDEH-PLTAVVHAAGVLDDG-----------------------VSESLTVERLDQVLRPKVDGARNLLELIDPDV----  657 (795)
T ss_dssp             SCTTS-CEEEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS----
T ss_pred             HHHhC-CCEEEEECCCcCCCC-----------------------chhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC----
Confidence            87776 999999999987543                       23346899999999999999999999998877    


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                        +||++||+++..+.                                          +++..|++||+.+..|++.++.
T Consensus       658 --~iV~~SS~ag~~g~------------------------------------------~g~~~YaAaka~~~alA~~~~~  693 (795)
T 3slk_A          658 --ALVLFSSVSGVLGS------------------------------------------GGQGNYAAANSFLDALAQQRQS  693 (795)
T ss_dssp             --EEEEEEETHHHHTC------------------------------------------SSCHHHHHHHHHHHHHHHHHHH
T ss_pred             --EEEEEccHHhcCCC------------------------------------------CCCHHHHHHHHHHHHHHHHHHH
Confidence              89999999988665                                          7789999999766666555443


Q ss_pred             hCCCcEEEEeeCCeeecCC
Q 022357          240 RYPKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       240 e~~~i~vn~v~PG~v~t~~  258 (298)
                        .||++|+|+||++.|++
T Consensus       694 --~Gi~v~sI~pG~v~t~g  710 (795)
T 3slk_A          694 --RGLPTRSLAWGPWAEHG  710 (795)
T ss_dssp             --TTCCEEEEEECCCSCCC
T ss_pred             --cCCeEEEEECCeECcch
Confidence              49999999999999875

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.93  E-value=6.6e-25  Score=209.94  Aligned_cols=203  Identities=21%  Similarity=0.169  Sum_probs=162.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCch---hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEK---RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~-Vii~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .++++|||||+||||++++++|+++|++ |++++|+..   ...+..+++...+..   +.++.||++|.++++++++.+
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~---v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGAR---TTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCE---EEEEECCTTCHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCE---EEEEEeCCCCHHHHHHHHHHH
Confidence            4689999999999999999999999995 999999875   355666677665433   889999999999999999988


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                       ..++++|+||||||+.....                       +.+.+.+.+++.+++|+.|++++++++.+.    +.
T Consensus       302 -~~~g~ld~VIh~AG~~~~~~-----------------------l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~----~~  353 (486)
T 2fr1_A          302 -GDDVPLSAVFHAAATLDDGT-----------------------VDTLTGERIERASRAKVLGARNLHELTREL----DL  353 (486)
T ss_dssp             -CTTSCEEEEEECCCCCCCCC-----------------------GGGCCHHHHHHHTHHHHHHHHHHHHHHTTS----CC
T ss_pred             -HhcCCCcEEEECCccCCCCc-----------------------cccCCHHHHHHHHHHHHHHHHHHHHHhCcC----CC
Confidence             56789999999999875431                       223578899999999999999999988652    45


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+..+.                                          +++..|+++|++++.|++.++. 
T Consensus       354 ~~~V~~SS~a~~~g~------------------------------------------~g~~~Yaaaka~l~~la~~~~~-  390 (486)
T 2fr1_A          354 TAFVLFSSFASAFGA------------------------------------------PGLGGYAPGNAYLDGLAQQRRS-  390 (486)
T ss_dssp             SEEEEEEEHHHHTCC------------------------------------------TTCTTTHHHHHHHHHHHHHHHH-
T ss_pred             CEEEEEcChHhcCCC------------------------------------------CCCHHHHHHHHHHHHHHHHHHh-
Confidence            899999998876554                                          6678999999999999887664 


Q ss_pred             CCCcEEEEeeCCeeecC-CCCC----------CCCCChhhhhhhhhhhhccCC
Q 022357          241 YPKFCVNCVCPGFVKTD-INFH----------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       241 ~~~i~vn~v~PG~v~t~-~~~~----------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                       .|+++++|+||++.++ |...          ...++++++++.....+....
T Consensus       391 -~gi~v~~i~pG~~~~~gm~~~~~~~~~~~~g~~~i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          391 -DGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRAE  442 (486)
T ss_dssp             -TTCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHHHHHHTTC
T ss_pred             -cCCeEEEEECCeeCCCcccchhHHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence             4999999999999886 3321          124688888888877776433

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.92  E-value=1.9e-24  Score=207.66  Aligned_cols=200  Identities=17%  Similarity=0.173  Sum_probs=162.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCch---hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEK---RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .++++|||||+||||++++++|+++|+ +|++++|+..   ...+..+++...+.   ++.++.||++|.++++++++. 
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~---~v~~~~~Dvtd~~~v~~~~~~-  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGC---EVVHAACDVAERDALAALVTA-  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTC---EEEEEECCSSCHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCC---EEEEEEeCCCCHHHHHHHHhc-
Confidence            468999999999999999999999999 6999999864   35666677766543   389999999999999988875 


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                          +++|+||||||+.....                       +.+.+.+.+++.+++|+.|++++.+.+.+..   +.
T Consensus       334 ----~~ld~VVh~AGv~~~~~-----------------------~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~---~~  383 (511)
T 2z5l_A          334 ----YPPNAVFHTAGILDDAV-----------------------IDTLSPESFETVRGAKVCGAELLHQLTADIK---GL  383 (511)
T ss_dssp             ----SCCSEEEECCCCCCCBC-----------------------GGGCCHHHHHHHHHHHHHHHHHHHHHTSSCT---TC
T ss_pred             ----CCCcEEEECCcccCCcc-----------------------cccCCHHHHHHHHHHHHHHHHHHHHHHhhcc---CC
Confidence                68999999999875431                       2235788999999999999999999876531   45


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+..+.                                          +++..|+++|++++.|++.++. 
T Consensus       384 ~~~V~~SS~a~~~g~------------------------------------------~g~~~YaaaKa~ld~la~~~~~-  420 (511)
T 2z5l_A          384 DAFVLFSSVTGTWGN------------------------------------------AGQGAYAAANAALDALAERRRA-  420 (511)
T ss_dssp             CCEEEEEEGGGTTCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHT-
T ss_pred             CEEEEEeCHHhcCCC------------------------------------------CCCHHHHHHHHHHHHHHHHHHH-
Confidence            799999998887554                                          6688999999999999997643 


Q ss_pred             CCCcEEEEeeCCee-ecCCCCC----------CCCCChhhhhhhhhhhhccCC
Q 022357          241 YPKFCVNCVCPGFV-KTDINFH----------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       241 ~~~i~vn~v~PG~v-~t~~~~~----------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                       .|+++++|+||++ .|+|...          ...++++++++.....+...+
T Consensus       421 -~gi~v~sv~pG~~~~tgm~~~~~~~~~~~~g~~~l~~e~~a~~l~~al~~~~  472 (511)
T 2z5l_A          421 -AGLPATSVAWGLWGGGGMAAGAGEESLSRRGLRAMDPDAAVDALLGAMGRND  472 (511)
T ss_dssp             -TTCCCEEEEECCBCSTTCCCCHHHHHHHHHTBCCBCHHHHHHHHHHHHHHTC
T ss_pred             -cCCcEEEEECCcccCCcccccccHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence             5999999999999 7877633          245788998888877776443

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.90  E-value=6.5e-23  Score=186.56  Aligned_cols=184  Identities=18%  Similarity=0.130  Sum_probs=142.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++++|||||+|+||++++++|+++|++|++++|+........+.+......  .+.++++|+++.++++++++.     
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~~~~~~~~-----   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGK--TPAFHETDVSDERALARIFDA-----   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSC--CCEEECCCTTCHHHHHHHHHH-----
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCC--CceEEEeecCCHHHHHHHHhc-----
Confidence            5689999999999999999999999999999999887766666665543222  288899999999999988875     


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      +++|+||||||.....                           ...+...+.+++|+.+++++++++..    .+.++||
T Consensus        77 ~~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv  125 (341)
T 3enk_A           77 HPITAAIHFAALKAVG---------------------------ESVAKPIEYYRNNLDSLLSLLRVMRE----RAVKRIV  125 (341)
T ss_dssp             SCCCEEEECCCCCCHH---------------------------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEE
T ss_pred             cCCcEEEECccccccC---------------------------ccccChHHHHHHHHHHHHHHHHHHHh----CCCCEEE
Confidence            4799999999976432                           12334456788999999998887643    4557999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCc
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF  244 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i  244 (298)
                      ++||........                               ...+.+..+......|+.||++.+.+++.++.+++++
T Consensus       126 ~~SS~~~~g~~~-------------------------------~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~  174 (341)
T 3enk_A          126 FSSSATVYGVPE-------------------------------RSPIDETFPLSATNPYGQTKLMAEQILRDVEAADPSW  174 (341)
T ss_dssp             EEEEGGGBCSCS-------------------------------SSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred             EEecceEecCCC-------------------------------CCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCCCc
Confidence            999976542210                               0012222333456789999999999999999998889


Q ss_pred             EEEEeeCCeeecC
Q 022357          245 CVNCVCPGFVKTD  257 (298)
Q Consensus       245 ~vn~v~PG~v~t~  257 (298)
                      +++.+.||.+..+
T Consensus       175 ~~~~lRp~~v~G~  187 (341)
T 3enk_A          175 RVATLRYFNPVGA  187 (341)
T ss_dssp             EEEEEEECEEECC
T ss_pred             eEEEEeeccccCC
Confidence            9999999999876

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.90  E-value=1.3e-23  Score=182.06  Aligned_cols=184  Identities=18%  Similarity=0.169  Sum_probs=140.3

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcce-eEEEeccCcHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL-LFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dls~~~~v~~~~~~~   80 (298)
                      ..+++++++||||||+||++++++|+++|++|++++|+++++.....    .     .+ .++++|++  ++       +
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~-----~~~~~~~~Dl~--~~-------~   78 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R-----GASDIVVANLE--ED-------F   78 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T-----TCSEEEECCTT--SC-------C
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C-----CCceEEEcccH--HH-------H
Confidence            45789999999999999999999999999999999999887654332    1     17 88999999  33       3


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++.+|+||||||....                               +.+++.+++|+.+++++++++..    .+.
T Consensus        79 ~~~~~~~D~vi~~ag~~~~-------------------------------~~~~~~~~~n~~~~~~l~~a~~~----~~~  123 (236)
T 3e8x_A           79 SHAFASIDAVVFAAGSGPH-------------------------------TGADKTILIDLWGAIKTIQEAEK----RGI  123 (236)
T ss_dssp             GGGGTTCSEEEECCCCCTT-------------------------------SCHHHHHHTTTHHHHHHHHHHHH----HTC
T ss_pred             HHHHcCCCEEEECCCCCCC-------------------------------CCccccchhhHHHHHHHHHHHHH----cCC
Confidence            3345689999999997531                               23557799999999999999854    245


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+..+.                                      ..+ +....|+.+|++++.+++    +
T Consensus       124 ~~iv~~SS~~~~~~~--------------------------------------~~~-~~~~~Y~~sK~~~e~~~~----~  160 (236)
T 3e8x_A          124 KRFIMVSSVGTVDPD--------------------------------------QGP-MNMRHYLVAKRLADDELK----R  160 (236)
T ss_dssp             CEEEEECCTTCSCGG--------------------------------------GSC-GGGHHHHHHHHHHHHHHH----H
T ss_pred             CEEEEEecCCCCCCC--------------------------------------CCh-hhhhhHHHHHHHHHHHHH----H
Confidence            799999996544221                                      001 235789999999999876    3


Q ss_pred             CCCcEEEEeeCCeeecCCCCC-----------CCCCChhhhhhhhhhhhccCC
Q 022357          241 YPKFCVNCVCPGFVKTDINFH-----------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       241 ~~~i~vn~v~PG~v~t~~~~~-----------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                       .+++++.|.||.+.++....           ..+.++++.++..+..+..+.
T Consensus       161 -~gi~~~~lrpg~v~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  212 (236)
T 3e8x_A          161 -SSLDYTIVRPGPLSNEESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQH  212 (236)
T ss_dssp             -SSSEEEEEEECSEECSCCCSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGG
T ss_pred             -CCCCEEEEeCCcccCCCCCCeEEeccCCCcccCcEeHHHHHHHHHHHhcCcc
Confidence             59999999999999986422           235688999999888887654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.88  E-value=3.7e-22  Score=182.83  Aligned_cols=191  Identities=18%  Similarity=0.185  Sum_probs=149.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHC-CC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASK-GI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~-G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      ++++|++|||||+|+||++++++|+++ |+ +|++++|++.+.......+..     ..+.++.+|++|.++++++++  
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~-----~~v~~~~~Dl~d~~~l~~~~~--   90 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND-----PRMRFFIGDVRDLERLNYALE--   90 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCC-----TTEEEEECCTTCHHHHHHHTT--
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcC-----CCEEEEECCCCCHHHHHHHHh--
Confidence            357899999999999999999999999 98 999999998776665555432     138899999999998887764  


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                           .+|+||||||.....                           .......+.+++|+.|+.++++++.+.    +.
T Consensus        91 -----~~D~Vih~Aa~~~~~---------------------------~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v  134 (344)
T 2gn4_A           91 -----GVDICIHAAALKHVP---------------------------IAEYNPLECIKTNIMGASNVINACLKN----AI  134 (344)
T ss_dssp             -----TCSEEEECCCCCCHH---------------------------HHHHSHHHHHHHHHHHHHHHHHHHHHT----TC
T ss_pred             -----cCCEEEECCCCCCCC---------------------------chhcCHHHHHHHHHHHHHHHHHHHHhC----CC
Confidence                 689999999975321                           112334578999999999999999874    35


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+.                                             .....|+.||++.+.++++++.+
T Consensus       135 ~~~V~~SS~~~~---------------------------------------------~p~~~Y~~sK~~~E~~~~~~~~~  169 (344)
T 2gn4_A          135 SQVIALSTDKAA---------------------------------------------NPINLYGATKLCSDKLFVSANNF  169 (344)
T ss_dssp             SEEEEECCGGGS---------------------------------------------SCCSHHHHHHHHHHHHHHHGGGC
T ss_pred             CEEEEecCCccC---------------------------------------------CCccHHHHHHHHHHHHHHHHHHH
Confidence            799999996543                                             22468999999999999999987


Q ss_pred             C--CCcEEEEeeCCeeecCCCC--------------C---------CCCCChhhhhhhhhhhhccC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINF--------------H---------AGILSVEEGAESPVKLALLP  281 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~--------------~---------~~~~~~~~~a~~~~~~~~~~  281 (298)
                      +  .++++++|.||.|.++...              .         ..+.++++.++..+..+..+
T Consensus       170 ~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~  235 (344)
T 2gn4_A          170 KGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRM  235 (344)
T ss_dssp             CCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHC
T ss_pred             hCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhc
Confidence            6  5899999999999875310              0         01357777887777766543

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.88  E-value=1.1e-21  Score=179.52  Aligned_cols=215  Identities=13%  Similarity=0.020  Sum_probs=155.0

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHH-HCCCEEEEEecCchh------------hHHHHHHHHhcCCCCcceeEEEeccCcH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLA-SKGITVVLTARDEKR------------GLEAVEKLKASGVDPELLLFHQLDISDL   70 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La-~~G~~Vii~~r~~~~------------~~~~~~~~~~~~~~~~~~~~~~~Dls~~   70 (298)
                      +.+|++||||||+|||++++..|+ +.|+.|+++++..+.            .....+.++..+..   ...++||+++.
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~---a~~i~~Dv~d~  124 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLY---SVTIDGDAFSD  124 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCC---EEEEESCTTSH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCC---ceeEeCCCCCH
Confidence            457999999999999999999999 679999998876432            23455566666665   89999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEccccCCccccccccc-cc-----cccc---ccCccccchh-----hhhhhhHHHHHhh
Q 022357           71 ASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFA-DS-----GYQI---TKGDAEVDWS-----KVCYQTYELAVEC  136 (298)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~-~~-----~~~~---~~~~~~~~~~-----~~~~~~~~~~~~~  136 (298)
                      ++++++++.+.+.+|+||+||||++......+..... .+     +...   +.+.....|.     +.....++.+...
T Consensus       125 e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~v  204 (401)
T 4ggo_A          125 EIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKV  204 (401)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHH
Confidence            9999999999999999999999999875433221100 00     0000   0111111111     2222334555555


Q ss_pred             hhhhceeHHHHHHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCC
Q 022357          137 LKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGW  216 (298)
Q Consensus       137 ~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (298)
                      +....+..|...+...++|.  ++++++.+|++.+....                                        +
T Consensus       205 Mg~s~~s~w~~al~~a~lla--~G~siva~SYiGse~t~----------------------------------------P  242 (401)
T 4ggo_A          205 MGGEDWERWIKQLSKEGLLE--EGCITLAYSYIGPEATQ----------------------------------------A  242 (401)
T ss_dssp             HSSHHHHHHHHHHHHTTCEE--EEEEEEEEECCCCGGGH----------------------------------------H
T ss_pred             HhhhHHHHHHHHHHhhhccc--CCceEEEEeccCcceee----------------------------------------c
Confidence            55666667777788888885  45899999997654321                                        0


Q ss_pred             CCCCchhhhHHHHHHHHHHHHHHhCCCcEEEEeeCCeeecCCCCCCC
Q 022357          217 CPHSSAYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTDINFHAG  263 (298)
Q Consensus       217 ~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn~v~PG~v~t~~~~~~~  263 (298)
                      ..+...++.+|++|+..+|.|+.++.++++|.++||.+.|+.....+
T Consensus       243 ~Y~~G~mG~AKaaLEa~~r~La~eL~~~~a~v~v~~a~vT~AssaIP  289 (401)
T 4ggo_A          243 LYRKGTIGKAKEHLEATAHRLNKENPSIRAFVSVNKGLVTRASAVIP  289 (401)
T ss_dssp             HHTTSHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCCCCCTTGGGSS
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcCccccchhhcCC
Confidence            02235789999999999999999998999999999999998765544

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.88  E-value=1.1e-21  Score=179.83  Aligned_cols=187  Identities=19%  Similarity=0.035  Sum_probs=143.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.++++|||||+|+||++++++|+++|++|++++|+..+.....+.+.. .   ..+.++++|+++.+++.++++.+   
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~---~~~~~~~~Dl~d~~~~~~~~~~~---   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV-A---DGMQSEIGDIRDQNKLLESIREF---   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT-T---TTSEEEECCTTCHHHHHHHHHHH---
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhcc-C---CceEEEEccccCHHHHHHHHHhc---
Confidence            4678999999999999999999999999999999987655444333321 1   13889999999999999888765   


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        ++|+||||||....                           ..+.+.+.+.+++|+.++.++++++.+.   .+.++|
T Consensus        80 --~~d~vih~A~~~~~---------------------------~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~  127 (357)
T 1rkx_A           80 --QPEIVFHMAAQPLV---------------------------RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAV  127 (357)
T ss_dssp             --CCSEEEECCSCCCH---------------------------HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEE
T ss_pred             --CCCEEEECCCCccc---------------------------ccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeE
Confidence              79999999996321                           1244566788999999999999999763   235799


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC-
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP-  242 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~-  242 (298)
                      |++||.........                              .....+..+......|+.||.+.+.+++.++.++. 
T Consensus       128 v~~SS~~vyg~~~~------------------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~  177 (357)
T 1rkx_A          128 VNITSDKCYDNKEW------------------------------IWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFN  177 (357)
T ss_dssp             EEECCGGGBCCCCS------------------------------SSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             EEecCHHHhCCCCc------------------------------CCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhh
Confidence            99999765432100                              00011112334567899999999999999998873 


Q ss_pred             -------CcEEEEeeCCeeecCCC
Q 022357          243 -------KFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       243 -------~i~vn~v~PG~v~t~~~  259 (298)
                             +++++.+.||.|.++..
T Consensus       178 ~~~~~~~gi~~~~lrp~~v~G~~~  201 (357)
T 1rkx_A          178 PANYGQHGTAVATVRAGNVIGGGD  201 (357)
T ss_dssp             GGGHHHHCCEEEEEECCCEECTTC
T ss_pred             hhccccCCceEEEEeeceeeCCCC
Confidence                   99999999999998743

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.88  E-value=2.7e-21  Score=175.93  Aligned_cols=198  Identities=15%  Similarity=0.052  Sum_probs=140.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +++|||||+|+||++++++|+++|++|++++|+. .........+...+    ++.++.+|+++.++++++++..     
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~----~~~~~~~Dl~d~~~~~~~~~~~-----   72 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG----NFEFVHGDIRNKNDVTRLITKY-----   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTC----CCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCC----ceEEEEcCCCCHHHHHHHHhcc-----
Confidence            4799999999999999999999999999999864 23333344454322    2788999999999998888752     


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|+||||||.....                           .+.+.+++.+++|+.++.++++++.+.+.   .++||+
T Consensus        73 ~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~  122 (347)
T 1orr_A           73 MPDSCFHLAGQVAMT---------------------------TSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIY  122 (347)
T ss_dssp             CCSEEEECCCCCCHH---------------------------HHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEE
T ss_pred             CCCEEEECCcccChh---------------------------hhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEE
Confidence            699999999975321                           23456678899999999999999988753   269999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcE
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC  245 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~  245 (298)
                      +||.......... + ..+.+. .+.            .......+.+..+......|+.||++.+.+++.++.++ +++
T Consensus       123 ~SS~~v~g~~~~~-~-~~e~~~-~~~------------~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~  186 (347)
T 1orr_A          123 SSTNKVYGDLEQY-K-YNETET-RYT------------CVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF-GLN  186 (347)
T ss_dssp             EEEGGGGTTCTTS-C-EEECSS-CEE------------ETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH-CCE
T ss_pred             eccHHHhCCCCcC-C-cccccc-ccc------------ccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh-CCc
Confidence            9997654321000 0 000000 000            00000001122233456889999999999999999886 899


Q ss_pred             EEEeeCCeeecCCC
Q 022357          246 VNCVCPGFVKTDIN  259 (298)
Q Consensus       246 vn~v~PG~v~t~~~  259 (298)
                      ++.|.||.|.++..
T Consensus       187 ~~ilrp~~v~g~~~  200 (347)
T 1orr_A          187 TVVFRHSSMYGGRQ  200 (347)
T ss_dssp             EEEEEECCEECTTC
T ss_pred             EEEEccCceeCcCC
Confidence            99999999999853

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.87  E-value=1.7e-22  Score=175.20  Aligned_cols=180  Identities=16%  Similarity=0.098  Sum_probs=136.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +.+|+++||||+||||++++++|+++|+  +|++++|++++.....    .     ..+.++.+|+++.++++++++   
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~----~-----~~~~~~~~D~~d~~~~~~~~~---   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----Y-----KNVNQEVVDFEKLDDYASAFQ---   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----G-----GGCEEEECCGGGGGGGGGGGS---
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc----c-----CCceEEecCcCCHHHHHHHhc---
Confidence            4578999999999999999999999999  9999999876543211    0     127889999999988877664   


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                          ++|+||||||....                              ...+++.+++|+.+++.+++++.+    .+.+
T Consensus        84 ----~~d~vi~~ag~~~~------------------------------~~~~~~~~~~n~~~~~~~~~~~~~----~~~~  125 (242)
T 2bka_A           84 ----GHDVGFCCLGTTRG------------------------------KAGAEGFVRVDRDYVLKSAELAKA----GGCK  125 (242)
T ss_dssp             ----SCSEEEECCCCCHH------------------------------HHHHHHHHHHHTHHHHHHHHHHHH----TTCC
T ss_pred             ----CCCEEEECCCcccc------------------------------cCCcccceeeeHHHHHHHHHHHHH----CCCC
Confidence                79999999996421                              123467789999999999887654    3457


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..                                            +....|+.+|++++.+++.+    
T Consensus       126 ~iv~~SS~~~~~--------------------------------------------~~~~~Y~~sK~~~e~~~~~~----  157 (242)
T 2bka_A          126 HFNLLSSKGADK--------------------------------------------SSNFLYLQVKGEVEAKVEEL----  157 (242)
T ss_dssp             EEEEECCTTCCT--------------------------------------------TCSSHHHHHHHHHHHHHHTT----
T ss_pred             EEEEEccCcCCC--------------------------------------------CCcchHHHHHHHHHHHHHhc----
Confidence            999999976542                                            22467999999999998764    


Q ss_pred             CCc-EEEEeeCCeeecCCCCC-------------C-------CCCChhhhhhhhhhhhccCC
Q 022357          242 PKF-CVNCVCPGFVKTDINFH-------------A-------GILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       242 ~~i-~vn~v~PG~v~t~~~~~-------------~-------~~~~~~~~a~~~~~~~~~~~  282 (298)
                       ++ ++++|+||.+.|+....             .       .+.++++.++..+..+..+.
T Consensus       158 -~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  218 (242)
T 2bka_A          158 -KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  218 (242)
T ss_dssp             -CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             -CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCcc
Confidence             45 89999999999985321             0       12356677777776665433

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.87  E-value=2.4e-21  Score=166.07  Aligned_cols=189  Identities=9%  Similarity=0.016  Sum_probs=137.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHH-HCCCEEEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            6 KKYAVVTGSNKGIGFETVRQLA-SKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La-~~G~~Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .|+++||||+|+||++++++|+ ++|++|++++|+++ +++++.    ....   .+.++++|+++.++++++++     
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~---~~~~~~~D~~d~~~~~~~~~-----   72 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHE---RVTVIEGSFQNPGXLEQAVT-----   72 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTST---TEEEEECCTTCHHHHHHHHT-----
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCC---ceEEEECCCCCHHHHHHHHc-----
Confidence            3789999999999999999999 89999999999987 554433    1222   28899999999999888875     


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        .+|+||||||..                                          |+.     ++.+++.|++.+.++|
T Consensus        73 --~~d~vv~~ag~~------------------------------------------n~~-----~~~~~~~~~~~~~~~i  103 (221)
T 3r6d_A           73 --NAEVVFVGAMES------------------------------------------GSD-----MASIVKALSRXNIRRV  103 (221)
T ss_dssp             --TCSEEEESCCCC------------------------------------------HHH-----HHHHHHHHHHTTCCEE
T ss_pred             --CCCEEEEcCCCC------------------------------------------Chh-----HHHHHHHHHhcCCCeE
Confidence              689999999842                                          111     6778888877777899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCc-hhhhHHHHHHHHHHHHHHhCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSS-AYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~al~~l~~~la~e~~  242 (298)
                      |++||..+..+....                    ...+..             +... .|+.+|.+++.+++.     .
T Consensus       104 v~iSs~~~~~~~~~~--------------------~~~~~~-------------~~~~~~y~~~K~~~e~~~~~-----~  145 (221)
T 3r6d_A          104 IGVSMAGLSGEFPVA--------------------LEKWTF-------------DNLPISYVQGERQARNVLRE-----S  145 (221)
T ss_dssp             EEEEETTTTSCSCHH--------------------HHHHHH-------------HTSCHHHHHHHHHHHHHHHH-----S
T ss_pred             EEEeeceecCCCCcc--------------------cccccc-------------cccccHHHHHHHHHHHHHHh-----C
Confidence            999998766432100                    000000             1123 799999999988763     5


Q ss_pred             CcEEEEeeCCeeecCC-CCC-----------CCCCChhhhhhhhhhhh--ccCCCCCcceEeccC
Q 022357          243 KFCVNCVCPGFVKTDI-NFH-----------AGILSVEEGAESPVKLA--LLPDGGPTGRFFLRK  293 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~-~~~-----------~~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~  293 (298)
                      +++++.|+||++.++. ...           ..+.++++.++..+.++  ..+.......+.+..
T Consensus       146 ~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~  210 (221)
T 3r6d_A          146 NLNYTILRLTWLYNDPEXTDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGE  210 (221)
T ss_dssp             CSEEEEEEECEEECCTTCCCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEEC
T ss_pred             CCCEEEEechhhcCCCCCcceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecC
Confidence            9999999999999872 211           11457789999999988  666544455554443

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.87  E-value=1.6e-21  Score=177.03  Aligned_cols=203  Identities=21%  Similarity=0.134  Sum_probs=139.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEE-EeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH-QLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++++|||||+|+||++++++|+++|++|++++|+..+.....+.+......  .+.++ .+|+++.++++++++    
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~----   82 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPG--RFETAVVEDMLKQGAYDEVIK----   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTT--TEEEEECSCTTSTTTTTTTTT----
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCC--ceEEEEecCCcChHHHHHHHc----
Confidence            46789999999999999999999999999999999987666555555432211  27777 899999988777654    


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                         ++|+||||||.....                              +.+.+.+++|+.++.++++++.+.   .+.++
T Consensus        83 ---~~d~vih~A~~~~~~------------------------------~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~  126 (342)
T 1y1p_A           83 ---GAAGVAHIASVVSFS------------------------------NKYDEVVTPAIGGTLNALRAAAAT---PSVKR  126 (342)
T ss_dssp             ---TCSEEEECCCCCSCC------------------------------SCHHHHHHHHHHHHHHHHHHHHTC---TTCCE
T ss_pred             ---CCCEEEEeCCCCCCC------------------------------CCHHHHHHHHHHHHHHHHHHHHhC---CCCcE
Confidence               789999999976321                              123467899999999999999762   24579


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||........+...... -+...+.....+...    ..      ....+......|+.||++.+.+++.++.++ 
T Consensus       127 iv~~SS~~~~~~~~~~~~~~~-~~E~~~~~~~~~~~~----~~------~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~  195 (342)
T 1y1p_A          127 FVLTSSTVSALIPKPNVEGIY-LDEKSWNLESIDKAK----TL------PESDPQKSLWVYAASKTEAELAAWKFMDENK  195 (342)
T ss_dssp             EEEECCGGGTCCCCTTCCCCE-ECTTCCCHHHHHHHH----HS------CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEeccHHHhcCCCCCCCCcc-cCccccCchhhhhhc----cc------cccccccchHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999876522100000000 001011111100000    00      000011224689999999999999999987 


Q ss_pred             CCcEEEEeeCCeeecCCC
Q 022357          242 PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~  259 (298)
                      ++++++++.||.+.++..
T Consensus       196 ~~~~~~~~rp~~v~g~~~  213 (342)
T 1y1p_A          196 PHFTLNAVLPNYTIGTIF  213 (342)
T ss_dssp             CSSEEEEEEESEEECCCS
T ss_pred             CCceEEEEcCCceECCCC
Confidence            589999999999999864

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.87  E-value=4.1e-21  Score=175.73  Aligned_cols=186  Identities=17%  Similarity=0.079  Sum_probs=138.5

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCC--CcceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD--PELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +.++++|||||+|+||++++++|+++|++|++++|+.....+....+......  ...+.++.+|+++.++++++++   
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---
Confidence            45689999999999999999999999999999999764322222222211000  0128899999999998887765   


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                          .+|+||||||.....                           .+.+++++.+++|+.++.++++++.+.    +.+
T Consensus       102 ----~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~  146 (352)
T 1sb8_A          102 ----GVDYVLHQAALGSVP---------------------------RSINDPITSNATNIDGFLNMLIAARDA----KVQ  146 (352)
T ss_dssp             ----TCSEEEECCSCCCHH---------------------------HHHHCHHHHHHHHTHHHHHHHHHHHHT----TCS
T ss_pred             ----CCCEEEECCcccCch---------------------------hhhhCHHHHHHHHHHHHHHHHHHHHHc----CCC
Confidence                789999999975321                           134556788999999999999999763    457


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||.........                               ..+.+..+......|+.+|++.+.+++.++.++
T Consensus       147 ~~v~~SS~~~~~~~~~-------------------------------~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  195 (352)
T 1sb8_A          147 SFTYAASSSTYGDHPG-------------------------------LPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY  195 (352)
T ss_dssp             EEEEEEEGGGGTTCCC-------------------------------SSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeccHHhcCCCCC-------------------------------CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc
Confidence            9999999776532200                               011122233446789999999999999999886


Q ss_pred             CCcEEEEeeCCeeecCCC
Q 022357          242 PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~  259 (298)
                       +++++.+.||.+.++..
T Consensus       196 -g~~~~ilRp~~v~G~~~  212 (352)
T 1sb8_A          196 -GFSTIGLRYFNVFGRRQ  212 (352)
T ss_dssp             -CCCCEEEEECCEECTTC
T ss_pred             -CCCEEEEEECceeCcCC
Confidence             89999999999988753

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.86  E-value=4.4e-21  Score=172.99  Aligned_cols=177  Identities=22%  Similarity=0.155  Sum_probs=136.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +.+++|||||+|+||++++++|+++|++|++++|+... ..    +        .+.++.+|+++.++++++++.     
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l--------~~~~~~~Dl~d~~~~~~~~~~-----   72 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P--------NVEMISLDIMDSQRVKKVISD-----   72 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T--------TEEEEECCTTCHHHHHHHHHH-----
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c--------eeeEEECCCCCHHHHHHHHHh-----
Confidence            34799999999999999999999999999999998754 11    1        288899999999999888765     


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      +++|+||||||.....                           .+.+.+.+.+++|+.++.++++++ +.+  .+.++||
T Consensus        73 ~~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv  122 (321)
T 2pk3_A           73 IKPDYIFHLAAKSSVK---------------------------DSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRIL  122 (321)
T ss_dssp             HCCSEEEECCSCCCHH---------------------------HHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEE
T ss_pred             cCCCEEEEcCcccchh---------------------------hhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEE
Confidence            3799999999975321                           233456788999999999999999 554  2357999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCc
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF  244 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i  244 (298)
                      ++||........+                             ....+.+..+......|+.||++.+.+++.++.++ ++
T Consensus       123 ~~SS~~v~g~~~~-----------------------------~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi  172 (321)
T 2pk3_A          123 TIGSSEEYGMILP-----------------------------EESPVSEENQLRPMSPYGVSKASVGMLARQYVKAY-GM  172 (321)
T ss_dssp             EEEEGGGTBSCCG-----------------------------GGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH-CC
T ss_pred             EEccHHhcCCCCC-----------------------------CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc-CC
Confidence            9999865432100                             00112223334556899999999999999999885 99


Q ss_pred             EEEEeeCCeeecCCC
Q 022357          245 CVNCVCPGFVKTDIN  259 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~  259 (298)
                      +++.+.||.+.++..
T Consensus       173 ~~~ilrp~~v~g~~~  187 (321)
T 2pk3_A          173 DIIHTRTFNHIGPGQ  187 (321)
T ss_dssp             EEEEEEECEEECTTC
T ss_pred             CEEEEEeCcccCcCC
Confidence            999999999988754

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.86  E-value=1.7e-20  Score=174.11  Aligned_cols=193  Identities=16%  Similarity=0.095  Sum_probs=138.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHH-HCCCEEEEEecCchh---------hHHHHHHHHhcCCC-----CcceeEEEeccCcH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLA-SKGITVVLTARDEKR---------GLEAVEKLKASGVD-----PELLLFHQLDISDL   70 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La-~~G~~Vii~~r~~~~---------~~~~~~~~~~~~~~-----~~~~~~~~~Dls~~   70 (298)
                      ++++|||||+|+||++++++|+ ++|++|++++|+...         ...+.+.++.....     ..++.++.+|+++.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3589999999999999999999 999999999997654         33333333333211     11278899999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHH
Q 022357           71 ASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEA  150 (298)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~  150 (298)
                      ++++++++.    ++++|+||||||.....                           .+.+.+++.+++|+.++++++++
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~Nv~g~~~ll~a  130 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG---------------------------ESVRDPLKYYDNNVVGILRLLQA  130 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH---------------------------HHHHCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC---------------------------cchhhHHHHHHHHhHHHHHHHHH
Confidence            998877653    45699999999976321                           13455678899999999999998


Q ss_pred             HhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHH
Q 022357          151 LIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVI  230 (298)
Q Consensus       151 ~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al  230 (298)
                      +..    .+.++||++||.......... .  .                     ......+.+..++.....|+.||++.
T Consensus       131 ~~~----~~~~~iv~~SS~~v~g~~~~~-~--~---------------------~~~~~~~~E~~~~~p~~~Y~~sK~~~  182 (397)
T 1gy8_A          131 MLL----HKCDKIIFSSSAAIFGNPTMG-S--V---------------------STNAEPIDINAKKSPESPYGESKLIA  182 (397)
T ss_dssp             HHH----TTCCEEEEEEEGGGTBSCCC-----------------------------CCCCBCTTSCCBCSSHHHHHHHHH
T ss_pred             HHH----hCCCEEEEECCHHHhCCCCcc-c--c---------------------cccccCcCccCCCCCCCchHHHHHHH
Confidence            754    345799999996543221000 0  0                     00001122223334467899999999


Q ss_pred             HHHHHHHHHhCCCcEEEEeeCCeeecCC
Q 022357          231 NAYTRILAKRYPKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       231 ~~l~~~la~e~~~i~vn~v~PG~v~t~~  258 (298)
                      +.+++.++.++ +++++++.||.|..+.
T Consensus       183 e~~~~~~~~~~-gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          183 ERMIRDCAEAY-GIKGICLRYFNACGAH  209 (397)
T ss_dssp             HHHHHHHHHHH-CCEEEEEEECEEECCC
T ss_pred             HHHHHHHHHHH-CCcEEEEeccceeCCC
Confidence            99999999987 9999999999998764

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.86  E-value=3.2e-21  Score=175.21  Aligned_cols=218  Identities=17%  Similarity=0.091  Sum_probs=154.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +++++|||||+|+||++++++|+++|++|++++|+......  ..+..... ...+.++.+|+++.++++++++.+    
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGI-ENDVKIIHMDLLEFSNIIRTIEKV----   74 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTC-TTTEEECCCCTTCHHHHHHHHHHH----
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccc-cCceeEEECCCCCHHHHHHHHHhc----
Confidence            46899999999999999999999999999999998765321  12222211 113888899999999999888765    


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       ++|+||||||.....                           .+.+.+++.+++|+.+++++++++...   ...++||
T Consensus        75 -~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv  123 (345)
T 2z1m_A           75 -QPDEVYNLAAQSFVG---------------------------VSFEQPILTAEVDAIGVLRILEALRTV---KPDTKFY  123 (345)
T ss_dssp             -CCSEEEECCCCCCHH---------------------------HHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTCEEE
T ss_pred             -CCCEEEECCCCcchh---------------------------hhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCceEE
Confidence             789999999975321                           234556788999999999999999853   1137999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC--
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP--  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~--  242 (298)
                      ++||........                               ...+.+..+......|+.||++.+.+++.++.++.  
T Consensus       124 ~~SS~~vyg~~~-------------------------------~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~  172 (345)
T 2z1m_A          124 QASTSEMFGKVQ-------------------------------EIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMF  172 (345)
T ss_dssp             EEEEGGGGCSCS-------------------------------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             EEechhhcCCCC-------------------------------CCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCc
Confidence            999976442210                               00112223335567899999999999999998852  


Q ss_pred             ---CcEEEEeeCCeeecCCCC-------------------C-----CCCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          243 ---KFCVNCVCPGFVKTDINF-------------------H-----AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       243 ---~i~vn~v~PG~v~t~~~~-------------------~-----~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                         .+.+|.+.||.+.|.+..                   .     ..+..+++.++..+..+..+.   .+.|.+.++
T Consensus       173 ~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~---~~~~~i~~~  248 (345)
T 2z1m_A          173 ACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE---PDDYVIATG  248 (345)
T ss_dssp             EEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS---CCCEEECCS
T ss_pred             eEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC---CceEEEeCC
Confidence               345678889977654210                   0     124577888888887776543   244555443

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.86  E-value=4.3e-21  Score=174.14  Aligned_cols=180  Identities=19%  Similarity=0.138  Sum_probs=135.0

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCch--hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++++|||||+|+||++++++|+++|  ++|++++|+..  .... ++++..    ...+.++.+|+++.+++++++.   
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~-~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~---   74 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPAN-LKDLED----DPRYTFVKGDVADYELVKELVR---   74 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG-GTTTTT----CTTEEEEECCTTCHHHHHHHHH---
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhH-Hhhhcc----CCceEEEEcCCCCHHHHHHHhh---
Confidence            4579999999999999999999996  89999998742  1111 111111    1238889999999999888772   


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                          .+|+||||||.....                           .+.+.+++.+++|+.++.++++++.+.   ...+
T Consensus        75 ----~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~  120 (336)
T 2hun_A           75 ----KVDGVVHLAAESHVD---------------------------RSISSPEIFLHSNVIGTYTLLESIRRE---NPEV  120 (336)
T ss_dssp             ----TCSEEEECCCCCCHH---------------------------HHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTS
T ss_pred             ----CCCEEEECCCCcChh---------------------------hhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCc
Confidence                799999999975321                           244566788999999999999999886   2237


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||........                               .+.+.+..+......|+.||++.+.+++.++.++
T Consensus       121 ~iv~~SS~~vyg~~~-------------------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  169 (336)
T 2hun_A          121 RFVHVSTDEVYGDIL-------------------------------KGSFTENDRLMPSSPYSATKAASDMLVLGWTRTY  169 (336)
T ss_dssp             EEEEEEEGGGGCCCS-------------------------------SSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeccHHHHCCCC-------------------------------CCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh
Confidence            999999975432110                               0011122233456789999999999999999886


Q ss_pred             CCcEEEEeeCCeeecCCC
Q 022357          242 PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~  259 (298)
                       +++++.+.||.|.++..
T Consensus       170 -~~~~~ilrp~~v~g~~~  186 (336)
T 2hun_A          170 -NLNASITRCTNNYGPYQ  186 (336)
T ss_dssp             -TCEEEEEEECEEESTTC
T ss_pred             -CCCEEEEeeeeeeCcCC
Confidence             89999999999998764

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.86  E-value=2.9e-21  Score=176.95  Aligned_cols=193  Identities=17%  Similarity=0.067  Sum_probs=138.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCch--hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            8 YAVVTGSNKGIGFETVRQLASK-GITVVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++|||||+|+||++++++|+++ |++|++++|+..  ..... .++..    ...+.++.+|+++.+++.++++..    
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~----   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISE----SNRYNFEHADICDSAEITRIFEQY----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTT----CTTEEEEECCTTCHHHHHHHHHHH----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhc----CCCeEEEECCCCCHHHHHHHHhhc----
Confidence            5999999999999999999998 799999998752  22111 11111    123889999999999998887653    


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-----
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-----  159 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----  159 (298)
                       ++|+||||||....                           ..+.+.+++.+++|+.+++++++++.+.|...+     
T Consensus        73 -~~d~vih~A~~~~~---------------------------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~  124 (361)
T 1kew_A           73 -QPDAVMHLAAESHV---------------------------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKN  124 (361)
T ss_dssp             -CCSEEEECCSCCCH---------------------------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred             -CCCEEEECCCCcCh---------------------------hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCccccccc
Confidence             79999999997532                           124456678899999999999999999875322     


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .++||++||.................++                     ..+.+..+......|+.||++.+.+++.++.
T Consensus       125 ~~~iv~~SS~~v~g~~~~~~~~~~~~~~---------------------~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~  183 (361)
T 1kew_A          125 NFRFHHISTDEVYGDLPHPDEVENSVTL---------------------PLFTETTAYAPSSPYSASKASSDHLVRAWRR  183 (361)
T ss_dssp             HCEEEEEEEGGGGCCCCCGGGSCTTSCC---------------------CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEeCCHHHhCCCcccccccccccC---------------------CCCCCCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence            3599999997543211000000000000                     0112223335568999999999999999998


Q ss_pred             hCCCcEEEEeeCCeeecCCC
Q 022357          240 RYPKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       240 e~~~i~vn~v~PG~v~t~~~  259 (298)
                      ++ +++++.|.||.|.++..
T Consensus       184 ~~-gi~~~~vrp~~v~G~~~  202 (361)
T 1kew_A          184 TY-GLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             HH-CCCEEEEEECEEESTTC
T ss_pred             Hh-CCcEEEEeeceeECCCC
Confidence            86 89999999999999864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.86  E-value=1.6e-21  Score=214.98  Aligned_cols=177  Identities=21%  Similarity=0.186  Sum_probs=135.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCchhh---HHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRG---LEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~-Vii~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .+|++|||||++|||+++|+.|+++|++ |++++|+..+.   .+.++++...+.   ++.+++||+++.++++++++.+
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~---~v~~~~~Dvsd~~~v~~~~~~~ 1959 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGV---QVLVSTSNASSLDGARSLITEA 1959 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTC---EEEEECCCSSSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCC---EEEEEecCCCCHHHHHHHHHHH
Confidence            5789999999999999999999999997 88889986544   344555555443   3889999999999999999988


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      . .+|+||+||||||+....                       .+.+++.+.|++.+++|+.|++++.+++.+.|...  
T Consensus      1960 ~-~~g~id~lVnnAgv~~~~-----------------------~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~-- 2013 (2512)
T 2vz8_A         1960 T-QLGPVGGVFNLAMVLRDA-----------------------VLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL-- 2013 (2512)
T ss_dssp             H-HHSCEEEEEECCCC---------------------------------------CTTTTHHHHHHHHHHHHHHCTTC--
T ss_pred             H-hcCCCcEEEECCCcCCCC-----------------------chhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--
Confidence            6 479999999999986432                       23346889999999999999999999999988543  


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||+++..+.                                          +++..|++||+++.+|++.++.+
T Consensus      2014 g~iV~iSS~ag~~g~------------------------------------------~g~~~Y~aaKaal~~l~~~rr~~ 2051 (2512)
T 2vz8_A         2014 DYFVIFSSVSCGRGN------------------------------------------AGQANYGFANSAMERICEKRRHD 2051 (2512)
T ss_dssp             CEEEEECCHHHHTTC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEEecchhhcCCC------------------------------------------CCcHHHHHHHHHHHHHHHHHHHC
Confidence            899999998887654                                          67899999999999999987776


Q ss_pred             CCCcEEEEeeCCee
Q 022357          241 YPKFCVNCVCPGFV  254 (298)
Q Consensus       241 ~~~i~vn~v~PG~v  254 (298)
                        |....++..|.+
T Consensus      2052 --Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2052 --GLPGLAVQWGAI 2063 (2512)
T ss_dssp             --TSCCCEEEECCB
T ss_pred             --CCcEEEEEccCc
Confidence              555555555544

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.86  E-value=1.3e-20  Score=172.16  Aligned_cols=220  Identities=16%  Similarity=0.079  Sum_probs=159.5

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCC--cceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDP--ELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++++++|||||+|+||++++++|+++|++|++++|+..........+.......  ..+.++.+|+++.++++++++   
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   99 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK---   99 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT---
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc---
Confidence            457899999999999999999999999999999998766555555555431100  128999999999998887765   


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                          .+|+|||+||.....                           ...++..+.+++|+.++.++++++...    +.+
T Consensus       100 ----~~d~Vih~A~~~~~~---------------------------~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~  144 (351)
T 3ruf_A          100 ----GVDHVLHQAALGSVP---------------------------RSIVDPITTNATNITGFLNILHAAKNA----QVQ  144 (351)
T ss_dssp             ----TCSEEEECCCCCCHH---------------------------HHHHCHHHHHHHHTHHHHHHHHHHHHT----TCS
T ss_pred             ----CCCEEEECCccCCcc---------------------------hhhhCHHHHHHHHHHHHHHHHHHHHHc----CCC
Confidence                799999999975321                           244556678999999999999998653    346


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      ++|++||........                               ...+.+..+......|+.+|.+.+.+++.++.++
T Consensus       145 ~~v~~SS~~vyg~~~-------------------------------~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~  193 (351)
T 3ruf_A          145 SFTYAASSSTYGDHP-------------------------------ALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY  193 (351)
T ss_dssp             EEEEEEEGGGGTTCC-------------------------------CSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEecHHhcCCCC-------------------------------CCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh
Confidence            999999976543210                               0112223333456789999999999999999886


Q ss_pred             CCcEEEEeeCCeeecCCCCCC------------------------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          242 PKFCVNCVCPGFVKTDINFHA------------------------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~------------------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                       +++++.+.||.|..+.....                              .+...++.++..+..+........+.|.+
T Consensus       194 -g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni  272 (351)
T 3ruf_A          194 -GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNV  272 (351)
T ss_dssp             -CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEE
T ss_pred             -CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccccCCCEEEe
Confidence             89999999999988643211                              13456777777776666532333444444


Q ss_pred             cC
Q 022357          292 RK  293 (298)
Q Consensus       292 ~~  293 (298)
                      .+
T Consensus       273 ~~  274 (351)
T 3ruf_A          273 AV  274 (351)
T ss_dssp             SC
T ss_pred             CC
Confidence            44

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.86  E-value=3.4e-21  Score=165.43  Aligned_cols=199  Identities=15%  Similarity=0.071  Sum_probs=146.7

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++++||||+|+||++++++|+++|++|++++|++.+....       .   ..+.++++|+++.++++++++       .
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~---~~~~~~~~Dl~d~~~~~~~~~-------~   67 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------N---EHLKVKKADVSSLDEVCEVCK-------G   67 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------C---TTEEEECCCTTCHHHHHHHHT-------T
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------c---CceEEEEecCCCHHHHHHHhc-------C
Confidence            6899999999999999999999999999999997654221       1   238999999999999888875       6


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+||||||.....                                 .+.+++|+.++.++++++..    .+.+++|++
T Consensus        68 ~d~vi~~a~~~~~~---------------------------------~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~  110 (227)
T 3dhn_A           68 ADAVISAFNPGWNN---------------------------------PDIYDETIKVYLTIIDGVKK----AGVNRFLMV  110 (227)
T ss_dssp             CSEEEECCCC---------------------------------------CCSHHHHHHHHHHHHHHH----TTCSEEEEE
T ss_pred             CCEEEEeCcCCCCC---------------------------------hhHHHHHHHHHHHHHHHHHH----hCCCEEEEe
Confidence            89999999864210                                 12578899999999988765    344699999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      ||.....+..                                +......+......|+.+|.+.+.+++.++.+ .++++
T Consensus       111 Ss~~~~~~~~--------------------------------~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~-~~~~~  157 (227)
T 3dhn_A          111 GGAGSLFIAP--------------------------------GLRLMDSGEVPENILPGVKALGEFYLNFLMKE-KEIDW  157 (227)
T ss_dssp             CCSTTSEEET--------------------------------TEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGC-CSSEE
T ss_pred             CChhhccCCC--------------------------------CCccccCCcchHHHHHHHHHHHHHHHHHHhhc-cCccE
Confidence            9977553320                                00111122234678999999999999988876 49999


Q ss_pred             EEeeCCeeecCCCCC----------------CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          247 NCVCPGFVKTDINFH----------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       247 n~v~PG~v~t~~~~~----------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +.+.||.+.++....                ..+..+++.++..+..+..++ ..+.++.+.+
T Consensus       158 ~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~-~~g~~~~~~~  219 (227)
T 3dhn_A          158 VFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPK-HHQERFTIGY  219 (227)
T ss_dssp             EEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCC-CCSEEEEEEC
T ss_pred             EEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCcc-ccCcEEEEEe
Confidence            999999998764321                113578899999888888665 3334444433

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.86  E-value=2.3e-21  Score=165.88  Aligned_cols=179  Identities=15%  Similarity=0.179  Sum_probs=139.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCc-HHHHHHHHHHHHHhcCC
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIKTQFGK   86 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~v~~~~~~~~~~~g~   86 (298)
                      +++||||+|+||++++++|+++|++|++++|+.++....           ..+.++++|+++ .++++++++       .
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~~~~~D~~d~~~~~~~~~~-------~   63 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-----------NNVKAVHFDVDWTPEEMAKQLH-------G   63 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-----------TTEEEEECCTTSCHHHHHTTTT-------T
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-----------CCceEEEecccCCHHHHHHHHc-------C
Confidence            699999999999999999999999999999998654322           138999999999 888777664       6


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+||||||....                                   +.+++|+.++.++++++..    .+.++||++
T Consensus        64 ~d~vi~~ag~~~~-----------------------------------~~~~~n~~~~~~l~~a~~~----~~~~~iv~~  104 (219)
T 3dqp_A           64 MDAIINVSGSGGK-----------------------------------SLLKVDLYGAVKLMQAAEK----AEVKRFILL  104 (219)
T ss_dssp             CSEEEECCCCTTS-----------------------------------SCCCCCCHHHHHHHHHHHH----TTCCEEEEE
T ss_pred             CCEEEECCcCCCC-----------------------------------CcEeEeHHHHHHHHHHHHH----hCCCEEEEE
Confidence            9999999997631                                   2578999999999998843    345799999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      ||..+..+...             ..                      ..+.....|+.+|.+.+.+++    +..++++
T Consensus       105 SS~~~~~~~~~-------------~e----------------------~~~~~~~~Y~~sK~~~e~~~~----~~~~i~~  145 (219)
T 3dqp_A          105 STIFSLQPEKW-------------IG----------------------AGFDALKDYYIAKHFADLYLT----KETNLDY  145 (219)
T ss_dssp             CCTTTTCGGGC-------------CS----------------------HHHHHTHHHHHHHHHHHHHHH----HSCCCEE
T ss_pred             CcccccCCCcc-------------cc----------------------cccccccHHHHHHHHHHHHHH----hccCCcE
Confidence            99776532100             00                      000125689999999999886    4469999


Q ss_pred             EEeeCCeeecCCCCC--------CCCCChhhhhhhhhhhhccCC
Q 022357          247 NCVCPGFVKTDINFH--------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       247 n~v~PG~v~t~~~~~--------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      +.|.||.+.++....        ..+.++++.++..+..+..+.
T Consensus       146 ~ilrp~~v~g~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~  189 (219)
T 3dqp_A          146 TIIQPGALTEEEATGLIDINDEVSASNTIGDVADTIKELVMTDH  189 (219)
T ss_dssp             EEEEECSEECSCCCSEEEESSSCCCCEEHHHHHHHHHHHHTCGG
T ss_pred             EEEeCceEecCCCCCccccCCCcCCcccHHHHHHHHHHHHhCcc
Confidence            999999999875322        245688999999998887654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.85  E-value=2.4e-20  Score=170.05  Aligned_cols=183  Identities=19%  Similarity=0.114  Sum_probs=133.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh------hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR------GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      +|++|||||+|+||++++++|+++|++|++++|+...      ..+..+.+......  .+.++.+|+++.++++++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~D~~~~~~~~~~~~~   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGR--SVEFEEMDILDQGALQRLFKK   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTC--CCEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCC--ceEEEECCCCCHHHHHHHHHh
Confidence            4789999999999999999999999999999986433      22333344321111  278899999999998887764


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      .     ++|+||||||.....                           ...+.+.+.+++|+.++.++++++..    .+
T Consensus        80 ~-----~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~  123 (348)
T 1ek6_A           80 Y-----SFMAVIHFAGLKAVG---------------------------ESVQKPLDYYRVNLTGTIQLLEIMKA----HG  123 (348)
T ss_dssp             C-----CEEEEEECCSCCCHH---------------------------HHHHCHHHHHHHHHHHHHHHHHHHHH----TT
T ss_pred             c-----CCCEEEECCCCcCcc---------------------------chhhchHHHHHHHHHHHHHHHHHHHH----hC
Confidence            2     799999999975321                           13345667899999999999987654    34


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCC-CCCchhhhHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC-PHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~al~~l~~~la  238 (298)
                      .++||++||........                               ...+.+..++ +....|+.||++.+.+++.++
T Consensus       124 ~~~iv~~SS~~~~g~~~-------------------------------~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~  172 (348)
T 1ek6_A          124 VKNLVFSSSATVYGNPQ-------------------------------YLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLC  172 (348)
T ss_dssp             CCEEEEEEEGGGGCSCS-------------------------------SSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECcHHHhCCCC-------------------------------CCCcCCCCCCCCCCCchHHHHHHHHHHHHHHH
Confidence            57999999976543210                               0001111222 236789999999999999999


Q ss_pred             HhCCCcEEEEeeCCeeecC
Q 022357          239 KRYPKFCVNCVCPGFVKTD  257 (298)
Q Consensus       239 ~e~~~i~vn~v~PG~v~t~  257 (298)
                      .+.+++++..+.|+.+..+
T Consensus       173 ~~~~~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          173 QADKTWNAVLLRYFNPTGA  191 (348)
T ss_dssp             HHCTTCEEEEEEECEEECC
T ss_pred             hcCCCcceEEEeeccccCC
Confidence            8834599999999888765

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.85  E-value=1.2e-20  Score=171.87  Aligned_cols=221  Identities=15%  Similarity=0.077  Sum_probs=149.7

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchh-hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKR-GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      |+++.+++||||||+|+||++++++|+++|  ++|++.+|.... ...   .+.... ....+.++.+|+++.+++++++
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~---~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~   94 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLN---NVKSIQ-DHPNYYFVKGEIQNGELLEHVI   94 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGG---GGTTTT-TCTTEEEEECCTTCHHHHHHHH
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchh---hhhhhc-cCCCeEEEEcCCCCHHHHHHHH
Confidence            445677899999999999999999999999  678777776421 111   111111 1123899999999999999988


Q ss_pred             HHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc
Q 022357           78 DFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL  157 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  157 (298)
                      +..     ++|+|||+||.....                           ...+.+.+.+++|+.++..+++++...   
T Consensus        95 ~~~-----~~d~Vih~A~~~~~~---------------------------~~~~~~~~~~~~nv~~~~~ll~a~~~~---  139 (346)
T 4egb_A           95 KER-----DVQVIVNFAAESHVD---------------------------RSIENPIPFYDTNVIGTVTLLELVKKY---  139 (346)
T ss_dssp             HHH-----TCCEEEECCCCC------------------------------------CHHHHHHTHHHHHHHHHHHHS---
T ss_pred             hhc-----CCCEEEECCcccchh---------------------------hhhhCHHHHHHHHHHHHHHHHHHHHhc---
Confidence            754     699999999976432                           123445677999999999999998663   


Q ss_pred             CCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH
Q 022357          158 SDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       158 ~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l  237 (298)
                       +.+++|++||........                              ....+.+..+......|+.+|.+.+.+++.+
T Consensus       140 -~~~~~v~~SS~~vy~~~~------------------------------~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~  188 (346)
T 4egb_A          140 -PHIKLVQVSTDEVYGSLG------------------------------KTGRFTEETPLAPNSPYSSSKASADMIALAY  188 (346)
T ss_dssp             -TTSEEEEEEEGGGGCCCC------------------------------SSCCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             -CCCEEEEeCchHHhCCCC------------------------------cCCCcCCCCCCCCCChhHHHHHHHHHHHHHH
Confidence             446899999976543210                              0011223334455688999999999999999


Q ss_pred             HHhCCCcEEEEeeCCeeecCCCCCC--------------------------CCCChhhhhhhhhhhhccCCCCCcceEec
Q 022357          238 AKRYPKFCVNCVCPGFVKTDINFHA--------------------------GILSVEEGAESPVKLALLPDGGPTGRFFL  291 (298)
Q Consensus       238 a~e~~~i~vn~v~PG~v~t~~~~~~--------------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l  291 (298)
                      +.++ +++++.+.||.+.++.....                          .+...++.++..+..+..+.  ..+.|.+
T Consensus       189 ~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~~i  265 (346)
T 4egb_A          189 YKTY-QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR--VGEVYNI  265 (346)
T ss_dssp             HHHH-CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC--TTCEEEE
T ss_pred             HHHh-CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC--CCCEEEE
Confidence            9885 89999999999988753210                          12346777777777776544  3344544


Q ss_pred             cCc
Q 022357          292 RKE  294 (298)
Q Consensus       292 ~~~  294 (298)
                      .++
T Consensus       266 ~~~  268 (346)
T 4egb_A          266 GGN  268 (346)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            443

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.85  E-value=5.8e-20  Score=170.80  Aligned_cols=199  Identities=18%  Similarity=0.101  Sum_probs=135.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhH----------------HHHHHHHh-cCCCCcceeEEEecc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL----------------EAVEKLKA-SGVDPELLLFHQLDI   67 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~----------------~~~~~~~~-~~~~~~~~~~~~~Dl   67 (298)
                      ++++||||||+|.||++++++|+++|++|++++|+.....                +....+.. ...   .+.++.+|+
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~v~~~~~Dl   86 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGK---SIELYVGDI   86 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCC---CCEEEESCT
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCC---ceEEEECCC
Confidence            5689999999999999999999999999999998754311                11222111 121   278899999


Q ss_pred             CcHHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHH
Q 022357           68 SDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQT  147 (298)
Q Consensus        68 s~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l  147 (298)
                      ++.++++++++..     ++|+||||||......                        ...+++.+.+.+++|+.|+.++
T Consensus        87 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~------------------------~~~~~~~~~~~~~~Nv~gt~~l  137 (404)
T 1i24_A           87 CDFEFLAESFKSF-----EPDSVVHFGEQRSAPY------------------------SMIDRSRAVYTQHNNVIGTLNV  137 (404)
T ss_dssp             TSHHHHHHHHHHH-----CCSEEEECCSCCCHHH------------------------HTSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHhcc-----CCCEEEECCCCCCccc------------------------hhhCccchhhhHHHHHHHHHHH
Confidence            9999998888755     6999999999753210                        0124455667899999999999


Q ss_pred             HHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhh-hcCCCCCCCchhhhH
Q 022357          148 CEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEI-ANRGWCPHSSAYKVS  226 (298)
Q Consensus       148 ~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Y~~s  226 (298)
                      ++++.+.-   ...+||++||.........+   ....++                .....+.. ....+......|+.|
T Consensus       138 l~a~~~~~---~~~~~V~~SS~~vyg~~~~~---~~E~~~----------------~~~~~~~~~~~~~~~~~~~~Y~~s  195 (404)
T 1i24_A          138 LFAIKEFG---EECHLVKLGTMGEYGTPNID---IEEGYI----------------TITHNGRTDTLPYPKQASSFYHLS  195 (404)
T ss_dssp             HHHHHHHC---TTCEEEEECCGGGGCCCSSC---BCSSEE----------------EEEETTEEEEEECCCCCCSHHHHH
T ss_pred             HHHHHHhC---CCcEEEEeCcHHHhCCCCCC---CCcccc----------------ccccccccccccCCCCCCChhHHH
Confidence            99997641   12499999997544221000   000000                00000000 000122446789999


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEeeCCeeecCC
Q 022357          227 KAVINAYTRILAKRYPKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       227 K~al~~l~~~la~e~~~i~vn~v~PG~v~t~~  258 (298)
                      |++.+.+++.++.++ ++++++|.||.|.+|.
T Consensus       196 K~~~e~~~~~~~~~~-gi~~~ivrp~~v~Gp~  226 (404)
T 1i24_A          196 KVHDSHNIAFTCKAW-GIRATDLNQGVVYGVK  226 (404)
T ss_dssp             HHHHHHHHHHHHHHH-CCEEEEEEECEEECSC
T ss_pred             HHHHHHHHHHHHHhc-CCeEEEEecceeeCCC
Confidence            999999999998886 9999999999999874

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.85  E-value=4.7e-21  Score=168.85  Aligned_cols=201  Identities=17%  Similarity=0.087  Sum_probs=147.9

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      |++|||||+|+||++++++|+++|++|++++|+..+..         .   ..+.++.+|+++.+++.++++       .
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~---~~~~~~~~Dl~d~~~~~~~~~-------~   63 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------E---AHEEIVACDLADAQAVHDLVK-------D   63 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------C---TTEEECCCCTTCHHHHHHHHT-------T
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------C---CCccEEEccCCCHHHHHHHHc-------C
Confidence            68999999999999999999999999999999875311         0   127888999999998888765       6


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+||||||....                               +.+++.+++|+.++.++++++.+    .+.++||++
T Consensus        64 ~d~vi~~a~~~~~-------------------------------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~  108 (267)
T 3ay3_A           64 CDGIIHLGGVSVE-------------------------------RPWNDILQANIIGAYNLYEAARN----LGKPRIVFA  108 (267)
T ss_dssp             CSEEEECCSCCSC-------------------------------CCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEE
T ss_pred             CCEEEECCcCCCC-------------------------------CCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEe
Confidence            8999999997521                               12346789999999999999875    345799999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      ||.........                              ...+.+..++.....|+.+|++.+.+++.++.+ .++++
T Consensus       109 SS~~~~~~~~~------------------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~gi~~  157 (267)
T 3ay3_A          109 SSNHTIGYYPR------------------------------TTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHK-FDIET  157 (267)
T ss_dssp             EEGGGSTTSBT------------------------------TSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHT-TCCCE
T ss_pred             CCHHHhCCCCC------------------------------CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH-cCCCE
Confidence            99765532100                              001122233344678999999999999998766 48999


Q ss_pred             EEeeCCee-ecCCCCC--CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          247 NCVCPGFV-KTDINFH--AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       247 n~v~PG~v-~t~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +.|.||.+ .++....  ..+.++++.++..+..+..+.. ....++..+
T Consensus       158 ~~lrp~~v~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~-~~~~~~~~~  206 (267)
T 3ay3_A          158 LNIRIGSCFPKPKDARMMATWLSVDDFMRLMKRAFVAPKL-GCTVVYGAS  206 (267)
T ss_dssp             EEEEECBCSSSCCSHHHHHHBCCHHHHHHHHHHHHHSSCC-CEEEEEECC
T ss_pred             EEEeceeecCCCCCCCeeeccccHHHHHHHHHHHHhCCCC-CceeEecCC
Confidence            99999998 4443211  2357889999888887765432 234444443

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.84  E-value=2e-20  Score=170.01  Aligned_cols=196  Identities=18%  Similarity=0.054  Sum_probs=130.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ++++++|||||+|+||++++++|+++|++|+++.|+.+..... ..+.........+.++++|+++.++++++++     
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKV-KHLLDLPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHH-HHHHTSTTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHH-HHHHhcccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            4678999999999999999999999999999999987643322 1121111101137889999999998887764     


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        .+|+|||+|+.....                            ..+..++.+++|+.|+.++++++.+..   ..++|
T Consensus        77 --~~d~Vih~A~~~~~~----------------------------~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~ri  123 (337)
T 2c29_D           77 --GCTGVFHVATPMDFE----------------------------SKDPENEVIKPTIEGMLGIMKSCAAAK---TVRRL  123 (337)
T ss_dssp             --TCSEEEECCCCCCSS----------------------------CSSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEE
T ss_pred             --CCCEEEEeccccCCC----------------------------CCChHHHHHHHHHHHHHHHHHHHHhCC---CccEE
Confidence              589999999854211                            011124578999999999999998753   24799


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      |++||..+..+.........+.++   ...+...  .               ..+....|+.||.+.+.+++.++.++ +
T Consensus       124 V~~SS~~~~~~~~~~~~~~~E~~~---~~~~~~~--~---------------~~~~~~~Y~~sK~~~E~~~~~~~~~~-g  182 (337)
T 2c29_D          124 VFTSSAGTVNIQEHQLPVYDESCW---SDMEFCR--A---------------KKMTAWMYFVSKTLAEQAAWKYAKEN-N  182 (337)
T ss_dssp             EEECCGGGTSCSSSCCSEECTTCC---CCHHHHH--H---------------HCCTTHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             EEeeeHhhcccCCCCCcccCcccC---Cchhhhc--c---------------cCCccchHHHHHHHHHHHHHHHHHHc-C
Confidence            999998754322100000000000   0000000  0               00124579999999999998887664 8


Q ss_pred             cEEEEeeCCeeecCCC
Q 022357          244 FCVNCVCPGFVKTDIN  259 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~  259 (298)
                      +++++|.||.|.+|..
T Consensus       183 i~~~~lrp~~v~Gp~~  198 (337)
T 2c29_D          183 IDFITIIPTLVVGPFI  198 (337)
T ss_dssp             CCEEEEEECEEESCCS
T ss_pred             CcEEEEeCCceECCCC
Confidence            9999999999999863

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.84  E-value=2.5e-20  Score=169.88  Aligned_cols=189  Identities=17%  Similarity=0.102  Sum_probs=134.0

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchh-hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            7 KYAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKR-GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~--G~~Vii~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++|||||+|+||++++++|+++  |++|++++|+... .......+.   .  ..+.++.+|+++.++++++++     
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~---~--~~~~~~~~Dl~d~~~~~~~~~-----   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL---G--DRVELVVGDIADAELVDKLAA-----   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC---S--SSEEEEECCTTCHHHHHHHHT-----
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc---c--CCeEEEECCCCCHHHHHHHhh-----
Confidence            68999999999999999999999  8999999997531 111111111   1  238899999999998887765     


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        .+|+||||||.....                           .+.+.+++.+++|+.++.++++++.+.    + ++|
T Consensus        75 --~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~  120 (348)
T 1oc2_A           75 --KADAIVHYAAESHND---------------------------NSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRF  120 (348)
T ss_dssp             --TCSEEEECCSCCCHH---------------------------HHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEE
T ss_pred             --cCCEEEECCcccCcc---------------------------chhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeE
Confidence              569999999975321                           234556788999999999999999875    2 499


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      |++||...........+.....                   ......+.+..+......|+.||++.+.+++.++.++ +
T Consensus       121 v~~SS~~vyg~~~~~~~~~~~~-------------------~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-g  180 (348)
T 1oc2_A          121 HHVSTDEVYGDLPLREDLPGHG-------------------EGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF-G  180 (348)
T ss_dssp             EEEEEGGGGCCBCCGGGSTTTT-------------------CSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-C
T ss_pred             EEecccceeCCCcccccccccc-------------------cccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh-C
Confidence            9999976432110000000000                   0000112222333556799999999999999999886 8


Q ss_pred             cEEEEeeCCeeecCCC
Q 022357          244 FCVNCVCPGFVKTDIN  259 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~  259 (298)
                      ++++.+.||.+.++..
T Consensus       181 i~~~ilrp~~v~G~~~  196 (348)
T 1oc2_A          181 VKATISNCSNNYGPYQ  196 (348)
T ss_dssp             CEEEEEEECCEESTTC
T ss_pred             CCEEEEeeceeeCCCC
Confidence            9999999999998764

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.83  E-value=6.8e-20  Score=166.45  Aligned_cols=180  Identities=18%  Similarity=0.129  Sum_probs=127.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      ++|||||+|+||++++++|+++|++|++++|.........+.+......  .+.++.+|+++.++++++++..     ++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~-----~~   74 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTS--CCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCC--cceEEEccCCCHHHHHHHhhcc-----CC
Confidence            6999999999999999999999999999987543222222333221111  2778899999999988877642     69


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+||||||.....                           ...+...+.+++|+.+++++++++..    .+.++||++|
T Consensus        75 D~vih~A~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~S  123 (338)
T 1udb_A           75 DTVIHFAGLKAVG---------------------------ESVQKPLEYYDNNVNGTLRLISAMRA----ANVKNFIFSS  123 (338)
T ss_dssp             SEEEECCSCCCHH---------------------------HHHHCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEE
T ss_pred             CEEEECCccCccc---------------------------cchhcHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEEc
Confidence            9999999975321                           12234456789999999999987643    3457999999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCC-CCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC-PHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      |........                               ...+.+..+. +....|+.||++++.+++.++.+++++++
T Consensus       124 S~~~~g~~~-------------------------------~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~  172 (338)
T 1udb_A          124 SATVYGDNP-------------------------------KIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI  172 (338)
T ss_dssp             EGGGGCSCC-------------------------------SSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred             cHHHhCCCC-------------------------------CCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhcCCCce
Confidence            976442110                               0001111121 23678999999999999999998778888


Q ss_pred             EEeeCCeeec
Q 022357          247 NCVCPGFVKT  256 (298)
Q Consensus       247 n~v~PG~v~t  256 (298)
                      ..+.|+.+..
T Consensus       173 ~ilR~~~v~G  182 (338)
T 1udb_A          173 ALLRYFNPVG  182 (338)
T ss_dssp             EEEEECEEEC
T ss_pred             EEEeeceecC
Confidence            8888765543

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.83  E-value=8.9e-20  Score=167.70  Aligned_cols=179  Identities=19%  Similarity=0.062  Sum_probs=122.2

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhH-HHHHHHHhcC-CCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL-EAVEKLKASG-VDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~-~~~~~~~~~~-~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      |++|||||+|+||++++++|+++|++|++++|+..... ...+.+.... .....+.++.+|+++.++++++++.+    
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc----
Confidence            68999999999999999999999999999999865321 1122221100 00113788899999999999888765    


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       ++|+||||||.....                           .+.+++.+.+++|+.++.++++++.+...+ +.++||
T Consensus        78 -~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv  128 (372)
T 1db3_A           78 -QPDEVYNLGAMSHVA---------------------------VSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFY  128 (372)
T ss_dssp             -CCSEEEECCCCCTTT---------------------------TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEE
T ss_pred             -CCCEEEECCcccCcc---------------------------ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEE
Confidence             789999999975421                           123445677899999999999999886533 237999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCc
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF  244 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i  244 (298)
                      ++||........                               ...+.+..+......|+.||++.+.+++.++.++ ++
T Consensus       129 ~~SS~~v~g~~~-------------------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~  176 (372)
T 1db3_A          129 QASTSELYGLVQ-------------------------------EIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY-GM  176 (372)
T ss_dssp             EEEEGGGGTTCC-------------------------------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CC
T ss_pred             EeCChhhhCCCC-------------------------------CCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHh-CC
Confidence            999976543210                               0011222333446789999999999999999885 44


Q ss_pred             EEEEee
Q 022357          245 CVNCVC  250 (298)
Q Consensus       245 ~vn~v~  250 (298)
                      .+..+.
T Consensus       177 ~~~~~r  182 (372)
T 1db3_A          177 YACNGI  182 (372)
T ss_dssp             CEEEEE
T ss_pred             CeEEEE
Confidence            443333

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.83  E-value=3.8e-20  Score=166.33  Aligned_cols=177  Identities=22%  Similarity=0.181  Sum_probs=130.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      ++|||||+|+||++++++|+++|++|++++|.......   .+   ..   .+.++.+|+++.++++++++..     .+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~---~~---~~~~~~~Dl~~~~~~~~~~~~~-----~~   67 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV---PK---GVPFFRVDLRDKEGVERAFREF-----RP   67 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS---CT---TCCEECCCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc---cc---CeEEEECCCCCHHHHHHHHHhc-----CC
Confidence            69999999999999999999999999999985432111   00   11   2678899999999988887643     78


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+|||+|+.....                           .+.+++.+.+++|+.+++++++++..    .+.++||++|
T Consensus        68 d~vi~~a~~~~~~---------------------------~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~S  116 (311)
T 2p5y_A           68 THVSHQAAQASVK---------------------------VSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFAS  116 (311)
T ss_dssp             SEEEECCSCCCHH---------------------------HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEE
T ss_pred             CEEEECccccCch---------------------------hhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeC
Confidence            9999999965321                           23456678899999999999999864    3347999999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVN  247 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn  247 (298)
                      |..+..+...                             ......+..++.....|+.||++.+.+++.++.++ +++++
T Consensus       117 S~~~~~g~~~-----------------------------~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~  166 (311)
T 2p5y_A          117 TGGAIYGEVP-----------------------------EGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSY-GLKWV  166 (311)
T ss_dssp             EHHHHHCCCC-----------------------------TTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEE
T ss_pred             CChhhcCCCC-----------------------------CCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHc-CCCEE
Confidence            9732211100                             00001112223346789999999999999999885 89999


Q ss_pred             EeeCCeeecCCC
Q 022357          248 CVCPGFVKTDIN  259 (298)
Q Consensus       248 ~v~PG~v~t~~~  259 (298)
                      .+.||.+.+|..
T Consensus       167 ~lrp~~v~Gp~~  178 (311)
T 2p5y_A          167 SLRYGNVYGPRQ  178 (311)
T ss_dssp             EEEECEEECTTC
T ss_pred             EEeeccccCcCC
Confidence            999999998753

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.83  E-value=1.1e-19  Score=165.77  Aligned_cols=169  Identities=16%  Similarity=0.025  Sum_probs=130.0

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +.+++|+||||||+|+||++++++|+++|++|++++|+...               ..+.++.+|+++.+++.++++   
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------------~~~~~~~~Dl~d~~~~~~~~~---   76 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG---------------TGGEEVVGSLEDGQALSDAIM---   76 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS---------------SCCSEEESCTTCHHHHHHHHT---
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC---------------CCccEEecCcCCHHHHHHHHh---
Confidence            34677899999999999999999999999999999998754               127889999999999888775   


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                          .+|+|||+|+....                             +...+++.+++|+.++.++++++..    .+.+
T Consensus        77 ----~~d~vih~A~~~~~-----------------------------~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~  119 (347)
T 4id9_A           77 ----GVSAVLHLGAFMSW-----------------------------APADRDRMFAVNVEGTRRLLDAASA----AGVR  119 (347)
T ss_dssp             ----TCSEEEECCCCCCS-----------------------------SGGGHHHHHHHHTHHHHHHHHHHHH----TTCS
T ss_pred             ----CCCEEEECCcccCc-----------------------------chhhHHHHHHHHHHHHHHHHHHHHH----cCCC
Confidence                78999999997643                             2223367899999999999999865    3457


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||........+                             ....+.+..+......|+.+|.+.+.+++.++.+.
T Consensus       120 ~~V~~SS~~vyg~~~~-----------------------------~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~  170 (347)
T 4id9_A          120 RFVFASSGEVYPENRP-----------------------------EFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG  170 (347)
T ss_dssp             EEEEEEEGGGTTTTSC-----------------------------SSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS
T ss_pred             eEEEECCHHHhCCCCC-----------------------------CCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc
Confidence            9999999654432100                             00112333344557889999999999999999885


Q ss_pred             CCcEEEEeeCCeee
Q 022357          242 PKFCVNCVCPGFVK  255 (298)
Q Consensus       242 ~~i~vn~v~PG~v~  255 (298)
                       +++++.+.|+.+.
T Consensus       171 -~~~~~ilRp~~v~  183 (347)
T 4id9_A          171 -AMETVILRFSHTQ  183 (347)
T ss_dssp             -SSEEEEEEECEEE
T ss_pred             -CCceEEEccceEe
Confidence             9999999999998

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.83  E-value=6.7e-20  Score=159.13  Aligned_cols=200  Identities=15%  Similarity=0.032  Sum_probs=139.8

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~--G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +++++++||||+|+||++++++|+++  |++|++++|++.+....       ..   .+.++.+|+++.++++++++   
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~---~~~~~~~D~~d~~~~~~~~~---   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GG---EADVFIGDITDADSINPAFQ---   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TC---CTTEEECCTTSHHHHHHHHT---
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CC---CeeEEEecCCCHHHHHHHHc---
Confidence            35689999999999999999999999  89999999987654322       11   27789999999999888775   


Q ss_pred             HhcCCccEEEEccccCCcccc-cccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           82 TQFGKLDILANNAGIASVKFD-MDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                          .+|+||||||....... ...               ......+...+.+++.+++|+.++.++++++...    +.
T Consensus        69 ----~~d~vi~~a~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~  125 (253)
T 1xq6_A           69 ----GIDALVILTSAVPKMKPGFDP---------------TKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GV  125 (253)
T ss_dssp             ----TCSEEEECCCCCCEECTTCCT---------------TSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TC
T ss_pred             ----CCCEEEEeccccccccccccc---------------cccccchhhccccccceeeeHHHHHHHHHHHHHc----CC
Confidence                68999999997643210 000               0000001233444567899999999999888653    34


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||..+..+..+.                                    . +.....|+.+|.+++.+++.    
T Consensus       126 ~~iv~~SS~~~~~~~~~~------------------------------------~-~~~~~~y~~sK~~~e~~~~~----  164 (253)
T 1xq6_A          126 KHIVVVGSMGGTNPDHPL------------------------------------N-KLGNGNILVWKRKAEQYLAD----  164 (253)
T ss_dssp             SEEEEEEETTTTCTTCGG------------------------------------G-GGGGCCHHHHHHHHHHHHHT----
T ss_pred             CEEEEEcCccCCCCCCcc------------------------------------c-cccchhHHHHHHHHHHHHHh----
Confidence            799999998764321000                                    0 01123578899999988763    


Q ss_pred             CCCcEEEEeeCCeeecCCCCC---------------CCCCChhhhhhhhhhhhccC
Q 022357          241 YPKFCVNCVCPGFVKTDINFH---------------AGILSVEEGAESPVKLALLP  281 (298)
Q Consensus       241 ~~~i~vn~v~PG~v~t~~~~~---------------~~~~~~~~~a~~~~~~~~~~  281 (298)
                       .+++++.|.||.+.++....               ..+.++++.++..+..+..+
T Consensus       165 -~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~  219 (253)
T 1xq6_A          165 -SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFE  219 (253)
T ss_dssp             -SSSCEEEEEECEEECSCSSSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCG
T ss_pred             -CCCceEEEecceeecCCcchhhhhccCCcCCcCCCCcEEcHHHHHHHHHHHHcCc
Confidence             68999999999999975321               11346778888877777654

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.83  E-value=2.9e-20  Score=167.52  Aligned_cols=194  Identities=20%  Similarity=0.149  Sum_probs=125.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec-CchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTAR-DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +|++|||||+|+||++++++|+++|++|+++.| +++.... ...+.........+.++++|+++.++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRD-VSFLTNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CC-CHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhH-HHHHHhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            578999999999999999999999999999998 6532100 01111111000127788999999999888775      


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       .+|+|||||+.....                            ..+..++.+++|+.|++++++++.+..   +.++||
T Consensus        74 -~~d~vih~A~~~~~~----------------------------~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV  121 (322)
T 2p4h_X           74 -GCVGIFHTASPIDFA----------------------------VSEPEEIVTKRTVDGALGILKACVNSK---TVKRFI  121 (322)
T ss_dssp             -TCSEEEECCCCC------------------------------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEE
T ss_pred             -CCCEEEEcCCcccCC----------------------------CCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEE
Confidence             579999999643100                            111123578999999999999998752   347999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCc
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF  244 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i  244 (298)
                      ++||..+..+.....  ..+ +.......+  .+..               ..+....|+.||.+.+.+++.++.+ .++
T Consensus       122 ~~SS~~~~~~~~~~~--~~~-~e~~~~~~~--~~~~---------------~~p~~~~Y~~sK~~~e~~~~~~~~~-~gi  180 (322)
T 2p4h_X          122 YTSSGSAVSFNGKDK--DVL-DESDWSDVD--LLRS---------------VKPFGWNYAVSKTLAEKAVLEFGEQ-NGI  180 (322)
T ss_dssp             EEEEGGGTSCSSSCC--SEE-CTTCCCCHH--HHHH---------------HCCTTHHHHHHHHHHHHHHHHHHHH-TTC
T ss_pred             EeccHHHcccCCCCC--eec-CCccccchh--hhcc---------------cCcccccHHHHHHHHHHHHHHHHHh-cCC
Confidence            999987543211000  000 000000000  0000               0011236999999999988887766 489


Q ss_pred             EEEEeeCCeeecCCC
Q 022357          245 CVNCVCPGFVKTDIN  259 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~  259 (298)
                      +++.+.||.|.+++.
T Consensus       181 ~~~~lrp~~v~g~~~  195 (322)
T 2p4h_X          181 DVVTLILPFIVGRFV  195 (322)
T ss_dssp             CEEEEEECEEESCCC
T ss_pred             cEEEEcCCceECCCC
Confidence            999999999999864

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.83  E-value=1.3e-19  Score=167.16  Aligned_cols=182  Identities=16%  Similarity=0.019  Sum_probs=129.9

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-----hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-----GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +++|||||+|+||++++++|+++|++|++++|+...     +....+.+....  ...+.++.+|+++.+++.++++.+ 
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~-  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHI--EGNMKLHYGDLTDSTCLVKIINEV-  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-----------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhcccc--CCCceEEEccCCCHHHHHHHHHhc-
Confidence            689999999999999999999999999999998643     111111111000  112788999999999999888765 


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                          ++|+||||||.....                           .+.+++++.+++|+.++.++++++.+... .+.+
T Consensus       102 ----~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~  149 (375)
T 1t2a_A          102 ----KPTEIYNLGAQSHVK---------------------------ISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSV  149 (375)
T ss_dssp             ----CCSEEEECCSCCCHH---------------------------HHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTC
T ss_pred             ----CCCEEEECCCccccc---------------------------ccccCHHHHHHHHHHHHHHHHHHHHHhCC-Cccc
Confidence                789999999975321                           23456678899999999999999987653 2237


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||........                               ...+.+..+......|+.||++.+.+++.++.++
T Consensus       150 ~iv~~SS~~~~~~~~-------------------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  198 (375)
T 1t2a_A          150 KFYQASTSELYGKVQ-------------------------------EIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY  198 (375)
T ss_dssp             EEEEEEEGGGTCSCS-------------------------------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEecchhhhCCCC-------------------------------CCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHh
Confidence            999999976653210                               0011222233446789999999999999999875


Q ss_pred             CCcEEEEeeCCeee
Q 022357          242 PKFCVNCVCPGFVK  255 (298)
Q Consensus       242 ~~i~vn~v~PG~v~  255 (298)
                       ++.+..+.|+.+.
T Consensus       199 -~~~~~i~r~~~~~  211 (375)
T 1t2a_A          199 -NLFAVNGILFNHE  211 (375)
T ss_dssp             -CCEEEEEEECCEE
T ss_pred             -CCCEEEEeccccc
Confidence             6666666555443

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.82  E-value=3.6e-20  Score=170.14  Aligned_cols=211  Identities=15%  Similarity=0.044  Sum_probs=143.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHH--CCCEEEEEecCchhhHHHHH------HHHhcCCCCcceeEEEeccCcHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLAS--KGITVVLTARDEKRGLEAVE------KLKASGVDPELLLFHQLDISDLASVS   74 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~--~G~~Vii~~r~~~~~~~~~~------~~~~~~~~~~~~~~~~~Dls~~~~v~   74 (298)
                      .+.+++||||||+|+||++++++|++  +|++|++++|+.........      ......  ...+.++.+|+++.++++
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLI--GFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGT--TCCSEEEECCTTCHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhcc--ccCceEEECCCCCHHHHH
Confidence            46789999999999999999999999  99999999997652111000      000111  113788999999999888


Q ss_pred             HHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhh
Q 022357           75 SLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL  154 (298)
Q Consensus        75 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  154 (298)
                      ++      ...++|+||||||....                             +.+.+++.+++|+.++.++++++.. 
T Consensus        85 ~~------~~~~~D~vih~A~~~~~-----------------------------~~~~~~~~~~~Nv~gt~~ll~aa~~-  128 (362)
T 3sxp_A           85 RL------EKLHFDYLFHQAAVSDT-----------------------------TMLNQELVMKTNYQAFLNLLEIARS-  128 (362)
T ss_dssp             HH------TTSCCSEEEECCCCCGG-----------------------------GCCCHHHHHHHHTHHHHHHHHHHHH-
T ss_pred             Hh------hccCCCEEEECCccCCc-----------------------------cccCHHHHHHHHHHHHHHHHHHHHH-
Confidence            76      23589999999996532                             2344567899999999999999854 


Q ss_pred             hccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHH
Q 022357          155 LELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYT  234 (298)
Q Consensus       155 ~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~  234 (298)
                         . +++||++||........                                +.+.+..+......|+.||.+.+.++
T Consensus       129 ---~-~~~~V~~SS~~vyg~~~--------------------------------~~~~E~~~~~p~~~Y~~sK~~~E~~~  172 (362)
T 3sxp_A          129 ---K-KAKVIYASSAGVYGNTK--------------------------------APNVVGKNESPENVYGFSKLCMDEFV  172 (362)
T ss_dssp             ---T-TCEEEEEEEGGGGCSCC--------------------------------SSBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred             ---c-CCcEEEeCcHHHhCCCC--------------------------------CCCCCCCCCCCCChhHHHHHHHHHHH
Confidence               2 35699999955432210                                01222233345678999999999999


Q ss_pred             HHHHHhCCCcEEEEeeCCeeecCCCCC------------------------------CCCCChhhhhhhhhhhhccCCCC
Q 022357          235 RILAKRYPKFCVNCVCPGFVKTDINFH------------------------------AGILSVEEGAESPVKLALLPDGG  284 (298)
Q Consensus       235 ~~la~e~~~i~vn~v~PG~v~t~~~~~------------------------------~~~~~~~~~a~~~~~~~~~~~~~  284 (298)
                      +.++.+   +++..|.|+.+..|....                              ..+..+++.++..+..+..+.  
T Consensus       173 ~~~~~~---~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~--  247 (362)
T 3sxp_A          173 LSHSND---NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK--  247 (362)
T ss_dssp             HHTTTT---SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS--
T ss_pred             HHHhcc---CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC--
Confidence            998877   456666666665543210                              013457888888877776442  


Q ss_pred             CcceEeccC
Q 022357          285 PTGRFFLRK  293 (298)
Q Consensus       285 ~~~~~~l~~  293 (298)
                       .|.|.+.+
T Consensus       248 -~g~~~i~~  255 (362)
T 3sxp_A          248 -SGVYNVGY  255 (362)
T ss_dssp             -CEEEEESC
T ss_pred             -CCEEEeCC
Confidence             34554544

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.82  E-value=1.2e-19  Score=170.46  Aligned_cols=218  Identities=15%  Similarity=0.047  Sum_probs=146.6

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch---hhHHHHHHHHhcCC------CCcceeEEEeccCcHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK---RGLEAVEKLKASGV------DPELLLFHQLDISDLAS   72 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~---~~~~~~~~~~~~~~------~~~~~~~~~~Dls~~~~   72 (298)
                      ....+++||||||+|+||++++++|+++|++|++++|+..   ....+.+.+.....      ...++.++.+|+++.++
T Consensus        65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            3455689999999999999999999999999999999977   23333333322110      01138999999999888


Q ss_pred             HHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHh
Q 022357           73 VSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALI  152 (298)
Q Consensus        73 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~  152 (298)
                      +.        .++++|+||||||....                              .+.+.+.+++|+.++.++++++.
T Consensus       145 l~--------~~~~~d~Vih~A~~~~~------------------------------~~~~~~~~~~Nv~g~~~l~~aa~  186 (427)
T 4f6c_A          145 VV--------LPENMDTIIHAGARTDH------------------------------FGDDDEFEKVNVQGTVDVIRLAQ  186 (427)
T ss_dssp             CC--------CSSCCSEEEECCCCC-------------------------------------CHHHHHHHHHHHHHHHHH
T ss_pred             CC--------CcCCCCEEEECCcccCC------------------------------CCCHHHHHHHHHHHHHHHHHHHH
Confidence            76        45689999999997632                              23445779999999999999997


Q ss_pred             hhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCC---CCCCchhhhHHHH
Q 022357          153 PLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGW---CPHSSAYKVSKAV  229 (298)
Q Consensus       153 ~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Y~~sK~a  229 (298)
                      +     +.+++|++||...  +.....                         ......+.+..+   ......|+.||.+
T Consensus       187 ~-----~~~~~v~~SS~~~--G~~~~~-------------------------~~~~~~~~E~~~~~~~~~~~~Y~~sK~~  234 (427)
T 4f6c_A          187 Q-----HHARLIYVSTISV--GTYFDI-------------------------DTEDVTFSEADVYKGQLLTSPYTRSKFY  234 (427)
T ss_dssp             H-----TTCEEEEEEEGGG--GSEECS-------------------------SCSCCEECTTCSCSSCCCCSHHHHHHHH
T ss_pred             h-----cCCcEEEECchHh--CCCccC-------------------------CCCCccccccccccCCCCCCchHHHHHH
Confidence            7     3479999999776  210000                         000001111111   2357899999999


Q ss_pred             HHHHHHHHHHhCCCcEEEEeeCCeeecCCCCCC--------------------------------CCCChhhhhhhhhhh
Q 022357          230 INAYTRILAKRYPKFCVNCVCPGFVKTDINFHA--------------------------------GILSVEEGAESPVKL  277 (298)
Q Consensus       230 l~~l~~~la~e~~~i~vn~v~PG~v~t~~~~~~--------------------------------~~~~~~~~a~~~~~~  277 (298)
                      .+.+++.++.  .+++++.|.||.|.++.....                                .+...++.++..+..
T Consensus       235 ~E~~~~~~~~--~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~  312 (427)
T 4f6c_A          235 SELKVLEAVN--NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVAL  312 (427)
T ss_dssp             HHHHHHHHHH--TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHH
Confidence            9999999764  589999999999988753221                                134567777777777


Q ss_pred             hccCCCCCcceEeccC
Q 022357          278 ALLPDGGPTGRFFLRK  293 (298)
Q Consensus       278 ~~~~~~~~~~~~~l~~  293 (298)
                      +..+.  ..+.|.+.+
T Consensus       313 ~~~~~--~g~~~~l~~  326 (427)
T 4f6c_A          313 AQVNT--PQIIYHVLS  326 (427)
T ss_dssp             TTSCC--CCSEEEESC
T ss_pred             HcCCC--CCCEEEecC
Confidence            76554  444554544

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.82  E-value=7.3e-20  Score=166.28  Aligned_cols=172  Identities=17%  Similarity=0.112  Sum_probs=126.0

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      +++|||||+|+||++++++|+++|++|++++|+..+...+    ...     .+.++.+|+++.++++++++       .
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~~-----~~~~~~~Dl~d~~~~~~~~~-------~   77 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----AYL-----EPECRVAEMLDHAGLERALR-------G   77 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----GGG-----CCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----ccC-----CeEEEEecCCCHHHHHHHHc-------C
Confidence            4799999999999999999999999999999987654321    111     27889999999998877764       6


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+|||+||....                             ..+.+++.+++|+.++.++++++.+.    +.+++|++
T Consensus        78 ~d~vih~a~~~~~-----------------------------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~  124 (342)
T 2x4g_A           78 LDGVIFSAGYYPS-----------------------------RPRRWQEEVASALGQTNPFYAACLQA----RVPRILYV  124 (342)
T ss_dssp             CSEEEEC-----------------------------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEE
T ss_pred             CCEEEECCccCcC-----------------------------CCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEE
Confidence            8999999996431                             22345677999999999999999874    34799999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCC----CchhhhHHHHHHHHHHHHHHhCC
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPH----SSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      ||..........                              ....+..++..    ...|+.+|.+.+.+++.++..  
T Consensus       125 SS~~~~~~~~~~------------------------------~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~~--  172 (342)
T 2x4g_A          125 GSAYAMPRHPQG------------------------------LPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARN--  172 (342)
T ss_dssp             CCGGGSCCCTTS------------------------------SCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCHHhhCcCCCC------------------------------CCCCCCCCCCccccccChHHHHHHHHHHHHHHHhhc--
Confidence            997765432100                              00111122222    678999999999999999875  


Q ss_pred             CcEEEEeeCCeeecCCC
Q 022357          243 KFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~  259 (298)
                      +++++.|.||.+.++..
T Consensus       173 g~~~~ilrp~~v~g~~~  189 (342)
T 2x4g_A          173 GLPVVIGIPGMVLGELD  189 (342)
T ss_dssp             TCCEEEEEECEEECSCC
T ss_pred             CCcEEEEeCCceECCCC
Confidence            99999999999998754

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.82  E-value=2.2e-20  Score=167.66  Aligned_cols=172  Identities=19%  Similarity=0.037  Sum_probs=131.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      +++|||||+|+||++++++|+++|++|++++|+........      .   ..+.++.+|+++.+ +.++++       .
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~---~~~~~~~~Dl~d~~-~~~~~~-------~   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV------N---PSAELHVRDLKDYS-WGAGIK-------G   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS------C---TTSEEECCCTTSTT-TTTTCC-------C
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc------C---CCceEEECccccHH-HHhhcC-------C
Confidence            47999999999999999999999999999999865432221      1   12788999999987 555443       3


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                       |+||||||.....                           .+.+.+...+++|+.++.++++++...    +.++||++
T Consensus        64 -d~vih~A~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~iv~~  111 (312)
T 3ko8_A           64 -DVVFHFAANPEVR---------------------------LSTTEPIVHFNENVVATFNVLEWARQT----GVRTVVFA  111 (312)
T ss_dssp             -SEEEECCSSCSSS---------------------------GGGSCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEE
T ss_pred             -CEEEECCCCCCch---------------------------hhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEe
Confidence             9999999964321                           244556678999999999999998542    45699999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      ||........                               .....+..+......|+.||.+.+.+++.++.++ ++++
T Consensus       112 SS~~vyg~~~-------------------------------~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-g~~~  159 (312)
T 3ko8_A          112 SSSTVYGDAD-------------------------------VIPTPEEEPYKPISVYGAAKAAGEVMCATYARLF-GVRC  159 (312)
T ss_dssp             EEGGGGCSCS-------------------------------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEE
T ss_pred             CcHHHhCCCC-------------------------------CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh-CCCE
Confidence            9976543210                               0112223344557899999999999999999987 9999


Q ss_pred             EEeeCCeeecCCC
Q 022357          247 NCVCPGFVKTDIN  259 (298)
Q Consensus       247 n~v~PG~v~t~~~  259 (298)
                      +.+.||.+.++..
T Consensus       160 ~~lrp~~v~g~~~  172 (312)
T 3ko8_A          160 LAVRYANVVGPRL  172 (312)
T ss_dssp             EEEEECEEECTTC
T ss_pred             EEEeeccccCcCC
Confidence            9999999999853

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.82  E-value=6.6e-20  Score=166.83  Aligned_cols=179  Identities=17%  Similarity=0.133  Sum_probs=133.3

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCC-------CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKG-------ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSL   76 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G-------~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~   76 (298)
                      ++++++|||||+|+||++++++|+++|       ++|++++|+......      .   ....+.++.+|+++.++++++
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~---~~~~~~~~~~Dl~d~~~~~~~   82 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------G---FSGAVDARAADLSAPGEAEKL   82 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------T---CCSEEEEEECCTTSTTHHHHH
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------c---cCCceeEEEcCCCCHHHHHHH
Confidence            577899999999999999999999999       899999998653221      1   112378899999999988877


Q ss_pred             HHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhc
Q 022357           77 ADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE  156 (298)
Q Consensus        77 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~  156 (298)
                      ++      +.+|+||||||....                            .+.+++.+.+++|+.++.++++++.+...
T Consensus        83 ~~------~~~d~vih~A~~~~~----------------------------~~~~~~~~~~~~nv~g~~~l~~~~~~~~~  128 (342)
T 2hrz_A           83 VE------ARPDVIFHLAAIVSG----------------------------EAELDFDKGYRINLDGTRYLFDAIRIANG  128 (342)
T ss_dssp             HH------TCCSEEEECCCCCHH----------------------------HHHHCHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             Hh------cCCCEEEECCccCcc----------------------------cccccHHHHHHHHHHHHHHHHHHHHhccc
Confidence            64      379999999997521                            23456778899999999999999987542


Q ss_pred             cC-CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHH
Q 022357          157 LS-DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTR  235 (298)
Q Consensus       157 ~~-~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~  235 (298)
                      ++ +.++||++||........+                               ..+.+..++.....|+.||++.+.+++
T Consensus       129 ~~~~~~~iv~~SS~~~~~~~~~-------------------------------~~~~E~~~~~~~~~Y~~sK~~~e~~~~  177 (342)
T 2hrz_A          129 KDGYKPRVVFTSSIAVFGAPLP-------------------------------YPIPDEFHTTPLTSYGTQKAICELLLS  177 (342)
T ss_dssp             HHCCCCEEEEEEEGGGCCSSCC-------------------------------SSBCTTCCCCCSSHHHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEeCchHhhCCCCC-------------------------------CCcCCCCCCCCcchHHHHHHHHHHHHH
Confidence            21 1479999999865432100                               012222333456789999999999999


Q ss_pred             HHHHhC----CCcEEEEee--CCeeec
Q 022357          236 ILAKRY----PKFCVNCVC--PGFVKT  256 (298)
Q Consensus       236 ~la~e~----~~i~vn~v~--PG~v~t  256 (298)
                      .++.++    ..+|++.|.  ||.+.+
T Consensus       178 ~~~~~~~~~~~~ir~~~v~g~pg~~~~  204 (342)
T 2hrz_A          178 DYSRRGFFDGIGIRLPTICIRPGKPNA  204 (342)
T ss_dssp             HHHHTTSCEEEEEEECEETTCCSSCCC
T ss_pred             HHHHhcCCCceeEEeeeEEecCCCCcc
Confidence            998875    236777777  887544

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.82  E-value=4.1e-19  Score=160.65  Aligned_cols=175  Identities=14%  Similarity=0.100  Sum_probs=133.5

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      +++|||||+|+||++++++|+++|++|++++|+......   .+   ..   .+.++.+|+++.++++++++.     ..
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~---~~---~~~~~~~D~~~~~~~~~~~~~-----~~   67 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED---AI---TE---GAKFYNGDLRDKAFLRDVFTQ-----EN   67 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GS---CT---TSEEEECCTTCHHHHHHHHHH-----SC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh---hc---CC---CcEEEECCCCCHHHHHHHHhh-----cC
Confidence            579999999999999999999999999999987643221   11   11   278899999999998887764     37


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+|||+||.....                           .+.+.+.+.+++|+.++.++++++..    .+.+++|++
T Consensus        68 ~d~vih~a~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~  116 (330)
T 2c20_A           68 IEAVMHFAADSLVG---------------------------VSMEKPLQYYNNNVYGALCLLEVMDE----FKVDKFIFS  116 (330)
T ss_dssp             EEEEEECCCCCCHH---------------------------HHHHSHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEE
T ss_pred             CCEEEECCcccCcc---------------------------ccccCHHHHHHHHhHHHHHHHHHHHH----cCCCEEEEe
Confidence            99999999975321                           13355677899999999999998754    345799999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      ||........                               ...+.+..+......|+.+|.+.+.+++.++.++ ++++
T Consensus       117 Ss~~~~~~~~-------------------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~  164 (330)
T 2c20_A          117 STAATYGEVD-------------------------------VDLITEETMTNPTNTYGETKLAIEKMLHWYSQAS-NLRY  164 (330)
T ss_dssp             CCGGGGCSCS-------------------------------SSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS-SCEE
T ss_pred             CCceeeCCCC-------------------------------CCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHh-CCcE
Confidence            9966543210                               0012222333456889999999999999999886 8999


Q ss_pred             EEeeCCeeecCC
Q 022357          247 NCVCPGFVKTDI  258 (298)
Q Consensus       247 n~v~PG~v~t~~  258 (298)
                      +.+.||.+..+.
T Consensus       165 ~ilrp~~v~G~~  176 (330)
T 2c20_A          165 KIFRYFNVAGAT  176 (330)
T ss_dssp             EEEECSEEECCC
T ss_pred             EEEecCcccCCC
Confidence            999999988763

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.82  E-value=6.2e-20  Score=165.09  Aligned_cols=204  Identities=15%  Similarity=0.048  Sum_probs=143.5

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      +++|||||+|+||++++++|+++|+.|++..|+.......       .   ..+.++.+|+++ +++.++++       .
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~-------~---~~~~~~~~Dl~~-~~~~~~~~-------~   63 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV-------N---EAARLVKADLAA-DDIKDYLK-------G   63 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS-------C---TTEEEECCCTTT-SCCHHHHT-------T
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc-------C---CCcEEEECcCCh-HHHHHHhc-------C
Confidence            4799999999999999999999995555555554332111       1   128889999999 88777765       7


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+|||+|+.....                           .+.+.+++.+++|+.++.++++++..    .+.++||++
T Consensus        64 ~d~vih~a~~~~~~---------------------------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~  112 (313)
T 3ehe_A           64 AEEVWHIAANPDVR---------------------------IGAENPDEIYRNNVLATYRLLEAMRK----AGVSRIVFT  112 (313)
T ss_dssp             CSEEEECCCCCCCC----------------------------CCCCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEE
T ss_pred             CCEEEECCCCCChh---------------------------hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEe
Confidence            89999999964321                           23345567899999999999998654    345799999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      ||........                               .....+..+......|+.+|.+.+.+++.++.++ ++++
T Consensus       113 SS~~vyg~~~-------------------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-g~~~  160 (313)
T 3ehe_A          113 STSTVYGEAK-------------------------------VIPTPEDYPTHPISLYGASKLACEALIESYCHTF-DMQA  160 (313)
T ss_dssp             CCGGGGCSCS-------------------------------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred             CchHHhCcCC-------------------------------CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCE
Confidence            9976543210                               0011222334557889999999999999999986 9999


Q ss_pred             EEeeCCeeecCCCCC--------------------------CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          247 NCVCPGFVKTDINFH--------------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       247 n~v~PG~v~t~~~~~--------------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +.+.||.|.++....                          ..+...++.++..+..+.  .....+.|.+.+
T Consensus       161 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~--~~~~~~~~ni~~  231 (313)
T 3ehe_A          161 WIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR--GDERVNIFNIGS  231 (313)
T ss_dssp             EEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT--CCSSEEEEECCC
T ss_pred             EEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc--cCCCCceEEECC
Confidence            999999998874221                          023456777877777666  222344444444

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.82  E-value=2.2e-19  Score=162.74  Aligned_cols=181  Identities=15%  Similarity=0.017  Sum_probs=131.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhH-HHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL-EAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .++++|||||+|+||++++++|+++|++|++++|+..... ...+.+.    ....+.++.+|+++.++++++++.+   
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~---   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG----IEGDIQYEDGDMADACSVQRAVIKA---   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT----CGGGEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc----ccCceEEEECCCCCHHHHHHHHHHc---
Confidence            4689999999999999999999999999999999865421 1122211    1123888999999999999888765   


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-CCc
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPR  162 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~  162 (298)
                        ++|+||||||.....                           ...+.+.+.+++|+.++.++++++.+.    + .++
T Consensus        86 --~~d~Vih~A~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~  132 (335)
T 1rpn_A           86 --QPQEVYNLAAQSFVG---------------------------ASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETR  132 (335)
T ss_dssp             --CCSEEEECCSCCCHH---------------------------HHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSE
T ss_pred             --CCCEEEECccccchh---------------------------hhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCe
Confidence              789999999965321                           123445678999999999999998764    3 369


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      +|++||.........                               ..+.+..++.....|+.||++.+.+++.++.++ 
T Consensus       133 ~v~~SS~~v~g~~~~-------------------------------~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-  180 (335)
T 1rpn_A          133 FYQASTSEMFGLIQA-------------------------------ERQDENTPFYPRSPYGVAKLYGHWITVNYRESF-  180 (335)
T ss_dssp             EEEEEEGGGGCSCSS-------------------------------SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-
T ss_pred             EEEEeCHHHhCCCCC-------------------------------CCCCcccCCCCCChhHHHHHHHHHHHHHHHHHc-
Confidence            999999765432100                               011222333446789999999999999998875 


Q ss_pred             CcEEEEeeCCeeecC
Q 022357          243 KFCVNCVCPGFVKTD  257 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~  257 (298)
                      ++.+..+.|+.+..+
T Consensus       181 ~~~~~i~r~~~v~Gp  195 (335)
T 1rpn_A          181 GLHASSGILFNHESP  195 (335)
T ss_dssp             CCCEEEEEECCEECT
T ss_pred             CCcEEEEeeCcccCC
Confidence            677777777766554

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.81  E-value=9.2e-20  Score=165.47  Aligned_cols=208  Identities=14%  Similarity=0.097  Sum_probs=142.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.++++|||||+|+||++++++|+++|++|++++|+.....+..+.+       ..+.++.+|+++.++++++++.+  
T Consensus        17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-------~~v~~~~~Dl~d~~~~~~~~~~~--   87 (330)
T 2pzm_A           17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-------AGLSVIEGSVTDAGLLERAFDSF--   87 (330)
T ss_dssp             TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-------TTEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-------CCceEEEeeCCCHHHHHHHHhhc--
Confidence            467889999999999999999999999999999999754322111111       13888999999999998888765  


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                         ++|+||||||.....                            +.++++  +++|+.+++++++++..    .+.++
T Consensus        88 ---~~D~vih~A~~~~~~----------------------------~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~  130 (330)
T 2pzm_A           88 ---KPTHVVHSAAAYKDP----------------------------DDWAED--AATNVQGSINVAKAASK----AGVKR  130 (330)
T ss_dssp             ---CCSEEEECCCCCSCT----------------------------TCHHHH--HHHHTHHHHHHHHHHHH----HTCSE
T ss_pred             ---CCCEEEECCccCCCc----------------------------cccChh--HHHHHHHHHHHHHHHHH----cCCCE
Confidence               799999999976321                            112333  89999999999999974    24579


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..........                             ...+.+..  .....|+.||++.+.+++.+  ++ 
T Consensus       131 iV~~SS~~~~~~~~~~-----------------------------~~~~~E~~--~~~~~Y~~sK~~~e~~~~~~--~~~  177 (330)
T 2pzm_A          131 LLNFQTALCYGRPATV-----------------------------PIPIDSPT--APFTSYGISKTAGEAFLMMS--DVP  177 (330)
T ss_dssp             EEEEEEGGGGCSCSSS-----------------------------SBCTTCCC--CCCSHHHHHHHHHHHHHHTC--SSC
T ss_pred             EEEecCHHHhCCCccC-----------------------------CCCcCCCC--CCCChHHHHHHHHHHHHHHc--CCC
Confidence            9999998654321000                             00000011  13578999999999999887  44 


Q ss_pred             -CCcE-EEEeeCCeeecCCC---------------C--CCCCCChhhhhh-hhhhhhccCCCCCcceEeccC
Q 022357          242 -PKFC-VNCVCPGFVKTDIN---------------F--HAGILSVEEGAE-SPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       242 -~~i~-vn~v~PG~v~t~~~---------------~--~~~~~~~~~~a~-~~~~~~~~~~~~~~~~~~l~~  293 (298)
                       ..+| ++.+.||. .+++.               .  ...+..+++.++ ..+..+..+.   .+.+.+.+
T Consensus       178 ~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a~~~~~~~~~---g~~~~v~~  245 (330)
T 2pzm_A          178 VVSLRLANVTGPRL-AIGPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIADLSLQEGRP---TGVFNVST  245 (330)
T ss_dssp             EEEEEECEEECTTC-CSSHHHHHHHHHHTTCCCCEESCEECEEEHHHHHHHHHHHTSTTCC---CEEEEESC
T ss_pred             EEEEeeeeeECcCC-CCCHHHHHHHHHHcCCEEeCCCCEecceeHHHHHHHHHHHHhhcCC---CCEEEeCC
Confidence             3566 67777875 33221               0  112357778888 7777666532   44444443

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.81  E-value=1.3e-19  Score=166.88  Aligned_cols=213  Identities=13%  Similarity=0.066  Sum_probs=151.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccC-cHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS-DLASVSSLAD   78 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls-~~~~v~~~~~   78 (298)
                      |..+++++||||||+|+||++++++|+++ |++|++++|+..+......    .    ..+.++.+|++ +.+.++++++
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----~----~~v~~~~~Dl~~d~~~~~~~~~   90 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK----H----ERMHFFEGDITINKEWVEYHVK   90 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG----S----TTEEEEECCTTTCHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc----C----CCeEEEeCccCCCHHHHHHHhc
Confidence            45567789999999999999999999998 9999999998765433221    1    13899999999 9999888876


Q ss_pred             HHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                             .+|+|||+|+.....                           ...++..+.+++|+.++.++++++...    
T Consensus        91 -------~~d~Vih~A~~~~~~---------------------------~~~~~~~~~~~~nv~~~~~ll~a~~~~----  132 (372)
T 3slg_A           91 -------KCDVILPLVAIATPA---------------------------TYVKQPLRVFELDFEANLPIVRSAVKY----  132 (372)
T ss_dssp             -------HCSEEEECBCCCCHH---------------------------HHHHCHHHHHHHHTTTTHHHHHHHHHH----
T ss_pred             -------cCCEEEEcCccccHH---------------------------HHhhCHHHHHHHHHHHHHHHHHHHHHh----
Confidence                   589999999976432                           123445577899999999999988653    


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCC-------CCCchhhhHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC-------PHSSAYKVSKAVIN  231 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~Y~~sK~al~  231 (298)
                      + +++|++||.........                               ..+.+...+       .....|+.+|.+.+
T Consensus       133 ~-~~~v~~SS~~vyg~~~~-------------------------------~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E  180 (372)
T 3slg_A          133 G-KHLVFPSTSEVYGMCAD-------------------------------EQFDPDASALTYGPINKPRWIYACSKQLMD  180 (372)
T ss_dssp             T-CEEEEECCGGGGBSCCC-------------------------------SSBCTTTCCEEECCTTCTTHHHHHHHHHHH
T ss_pred             C-CcEEEeCcHHHhCCCCC-------------------------------CCCCccccccccCCCCCCCCcHHHHHHHHH
Confidence            3 79999999654322100                               001111111       23458999999999


Q ss_pred             HHHHHHHHhCCCcEEEEeeCCeeecCCCCC----------------------------------CCCCChhhhhhhhhhh
Q 022357          232 AYTRILAKRYPKFCVNCVCPGFVKTDINFH----------------------------------AGILSVEEGAESPVKL  277 (298)
Q Consensus       232 ~l~~~la~e~~~i~vn~v~PG~v~t~~~~~----------------------------------~~~~~~~~~a~~~~~~  277 (298)
                      .+++.++.+  +++++.+.|+.|..+....                                  ..+...++.++..+..
T Consensus       181 ~~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~  258 (372)
T 3slg_A          181 RVIWGYGME--GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKI  258 (372)
T ss_dssp             HHHHHHHTT--TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHC--CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHH
Confidence            999999887  9999999999998765221                                  0134667888888777


Q ss_pred             hccCCC-CCcceEeccC
Q 022357          278 ALLPDG-GPTGRFFLRK  293 (298)
Q Consensus       278 ~~~~~~-~~~~~~~l~~  293 (298)
                      +..+.. ...+.|.+.+
T Consensus       259 ~~~~~~~~~~~~~ni~~  275 (372)
T 3slg_A          259 IENSNGVATGKIYNIGN  275 (372)
T ss_dssp             HHCGGGTTTTEEEEECC
T ss_pred             HhcccCcCCCceEEeCC
Confidence            765543 2344444444

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.81  E-value=5.2e-19  Score=148.90  Aligned_cols=179  Identities=15%  Similarity=0.095  Sum_probs=131.2

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++++||||+|+||++++++|+++|++|++++|++.+....      .   ...+.++++|+++.++++++++       .
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~---~~~~~~~~~D~~~~~~~~~~~~-------~   67 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------G---PRPAHVVVGDVLQAADVDKTVA-------G   67 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------S---CCCSEEEESCTTSHHHHHHHHT-------T
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------c---CCceEEEEecCCCHHHHHHHHc-------C
Confidence            7899999999999999999999999999999997653211      0   1238899999999998887765       5


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+||||||.....                                  ...++|+.++..+++++..    .+.+++|++
T Consensus        68 ~d~vi~~a~~~~~~----------------------------------~~~~~n~~~~~~~~~~~~~----~~~~~~v~~  109 (206)
T 1hdo_A           68 QDAVIVLLGTRNDL----------------------------------SPTTVMSEGARNIVAAMKA----HGVDKVVAC  109 (206)
T ss_dssp             CSEEEECCCCTTCC----------------------------------SCCCHHHHHHHHHHHHHHH----HTCCEEEEE
T ss_pred             CCEEEECccCCCCC----------------------------------CccchHHHHHHHHHHHHHH----hCCCeEEEE
Confidence            89999999965320                                  0123677788888887765    245799999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      ||........                                      ..+.....|+.+|.+++.+++.     .++++
T Consensus       110 Ss~~~~~~~~--------------------------------------~~~~~~~~y~~~K~~~e~~~~~-----~~i~~  146 (206)
T 1hdo_A          110 TSAFLLWDPT--------------------------------------KVPPRLQAVTDDHIRMHKVLRE-----SGLKY  146 (206)
T ss_dssp             CCGGGTSCTT--------------------------------------CSCGGGHHHHHHHHHHHHHHHH-----TCSEE
T ss_pred             eeeeeccCcc--------------------------------------cccccchhHHHHHHHHHHHHHh-----CCCCE
Confidence            9975442210                                      0001357899999999998842     58999


Q ss_pred             EEeeCCee-ecCCCCC----------CCCCChhhhhhhhhhhhccCC
Q 022357          247 NCVCPGFV-KTDINFH----------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       247 n~v~PG~v-~t~~~~~----------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      +.+.||.+ .++....          ..+.++++.++..+..+..+.
T Consensus       147 ~~lrp~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  193 (206)
T 1hdo_A          147 VAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDE  193 (206)
T ss_dssp             EEECCSEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCST
T ss_pred             EEEeCCcccCCCCCcceEecccCCCCCCccCHHHHHHHHHHHhcCcc
Confidence            99999998 3432211          134578888888888887653

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.81  E-value=4.3e-19  Score=163.95  Aligned_cols=218  Identities=17%  Similarity=0.070  Sum_probs=147.8

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-----hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-----GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      |++|||||+|+||++++++|+++|++|++++|+...     +......+...+.  ..+.++.+|+++.+++.++++.+ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNK--ALMKLHYADLTDASSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccc--cceEEEECCCCCHHHHHHHHHhc-
Confidence            689999999999999999999999999999998653     2222111111111  02788999999999998888765 


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc-CCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SDS  160 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~  160 (298)
                          ++|+||||||.....                           .+.+.+.+.+++|+.++.++++++.+...+ .+.
T Consensus       106 ----~~d~Vih~A~~~~~~---------------------------~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~  154 (381)
T 1n7h_A          106 ----KPDEVYNLAAQSHVA---------------------------VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT  154 (381)
T ss_dssp             ----CCSEEEECCSCCCHH---------------------------HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCC
T ss_pred             ----CCCEEEECCcccCcc---------------------------ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCc
Confidence                789999999975321                           234566788999999999999999987643 234


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||........                                +.+.+..+......|+.+|++.+.+++.++.+
T Consensus       155 ~~~v~~SS~~vyg~~~--------------------------------~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~  202 (381)
T 1n7h_A          155 VKYYQAGSSEMFGSTP--------------------------------PPQSETTPFHPRSPYAASKCAAHWYTVNYREA  202 (381)
T ss_dssp             CEEEEEEEGGGGTTSC--------------------------------SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEeCcHHHhCCCC--------------------------------CCCCCCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence            6999999976543210                                01122223345678999999999999999887


Q ss_pred             CCCc------EEEEeeCCeeecCC-----------------C-------CCCCCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          241 YPKF------CVNCVCPGFVKTDI-----------------N-------FHAGILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       241 ~~~i------~vn~v~PG~v~t~~-----------------~-------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      + ++      .++.+.||...+..                 .       ....+..+++.++..+..+..+.   .+.|.
T Consensus       203 ~-~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~---~~~~~  278 (381)
T 1n7h_A          203 Y-GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK---PDDYV  278 (381)
T ss_dssp             H-CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS---CCEEE
T ss_pred             h-CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC---CCeEE
Confidence            5 33      23455565432210                 0       00124567888888877776543   24555


Q ss_pred             ccCc
Q 022357          291 LRKE  294 (298)
Q Consensus       291 l~~~  294 (298)
                      +.++
T Consensus       279 i~~~  282 (381)
T 1n7h_A          279 VATE  282 (381)
T ss_dssp             ECCS
T ss_pred             eeCC
Confidence            5443

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.81  E-value=2.1e-19  Score=163.17  Aligned_cols=178  Identities=20%  Similarity=0.113  Sum_probs=132.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC---C---CEEEEEecCchh-hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASK---G---ITVVLTARDEKR-GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~---G---~~Vii~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      ++|||||+|+||++++++|+++   |   ++|++++|+... ....+..+..    ...+.++.+|+++.+++++++   
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~---   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDA----DPRLRFVHGDIRDAGLLAREL---   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTT----CTTEEEEECCTTCHHHHHHHT---
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhccc----CCCeEEEEcCCCCHHHHHHHh---
Confidence            6999999999999999999997   8   999999986421 1111111111    123889999999998887776   


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                          ..+|+||||||.....                           .+.+.+++.+++|+.++.++++++.+.    +.
T Consensus        75 ----~~~d~Vih~A~~~~~~---------------------------~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~  119 (337)
T 1r6d_A           75 ----RGVDAIVHFAAESHVD---------------------------RSIAGASVFTETNVQGTQTLLQCAVDA----GV  119 (337)
T ss_dssp             ----TTCCEEEECCSCCCHH---------------------------HHHHCCHHHHHHHTHHHHHHHHHHHHT----TC
T ss_pred             ----cCCCEEEECCCccCch---------------------------hhhhCHHHHHHHHHHHHHHHHHHHHHc----CC
Confidence                4799999999975321                           234556678999999999999999875    34


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||........                               ...+.+..+......|+.||++.+.+++.++.+
T Consensus       120 ~~~v~~SS~~vyg~~~-------------------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~  168 (337)
T 1r6d_A          120 GRVVHVSTNQVYGSID-------------------------------SGSWTESSPLEPNSPYAASKAGSDLVARAYHRT  168 (337)
T ss_dssp             CEEEEEEEGGGGCCCS-------------------------------SSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEecchHHhCCCC-------------------------------CCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence            6999999976442210                               001122223345678999999999999999988


Q ss_pred             CCCcEEEEeeCCeeecCCC
Q 022357          241 YPKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       241 ~~~i~vn~v~PG~v~t~~~  259 (298)
                      + +++++.+.||.+.++..
T Consensus       169 ~-g~~~~ilrp~~v~G~~~  186 (337)
T 1r6d_A          169 Y-GLDVRITRCCNNYGPYQ  186 (337)
T ss_dssp             H-CCCEEEEEECEEECTTC
T ss_pred             H-CCCEEEEEeeeeECCCC
Confidence            5 89999999999988753

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.81  E-value=5.8e-19  Score=152.88  Aligned_cols=191  Identities=15%  Similarity=0.077  Sum_probs=128.7

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .|++|||||+|+||++++++|+++| ++|++++|+++++...       ..  ..+.++++|+++.++++++++      
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-------~~--~~~~~~~~Dl~d~~~~~~~~~------   87 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-------YP--TNSQIIMGDVLNHAALKQAMQ------   87 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-------CC--TTEEEEECCTTCHHHHHHHHT------
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-------cc--CCcEEEEecCCCHHHHHHHhc------
Confidence            4789999999999999999999999 8999999998754321       11  138899999999999888875      


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       .+|+||||+|....                                             ...++.+++.|++.+.++||
T Consensus        88 -~~D~vv~~a~~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~iV  121 (236)
T 3qvo_A           88 -GQDIVYANLTGEDL---------------------------------------------DIQANSVIAAMKACDVKRLI  121 (236)
T ss_dssp             -TCSEEEEECCSTTH---------------------------------------------HHHHHHHHHHHHHTTCCEEE
T ss_pred             -CCCEEEEcCCCCch---------------------------------------------hHHHHHHHHHHHHcCCCEEE
Confidence             68999999985210                                             02345777888777778999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCc
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF  244 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i  244 (298)
                      ++||...........                             ..............|..+|..+         +..++
T Consensus       122 ~iSS~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~l---------~~~gi  163 (236)
T 3qvo_A          122 FVLSLGIYDEVPGKF-----------------------------VEWNNAVIGEPLKPFRRAADAI---------EASGL  163 (236)
T ss_dssp             EECCCCC---------------------------------------------CGGGHHHHHHHHHH---------HTSCS
T ss_pred             EEecceecCCCCccc-----------------------------ccchhhcccchHHHHHHHHHHH---------HHCCC
Confidence            999977653320000                             0000000111123344443322         13599


Q ss_pred             EEEEeeCCeeecCCCCC-----------CCCCChhhhhhhhhhhhccCCCCCcceEeccCcc
Q 022357          245 CVNCVCPGFVKTDINFH-----------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKEE  295 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~-----------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~  295 (298)
                      +++.|+||++.++....           ..+.++++.++..+.++..+....+..+.+....
T Consensus       164 ~~~~vrPg~i~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~  225 (236)
T 3qvo_A          164 EYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPG  225 (236)
T ss_dssp             EEEEEEECEEECCSCCCCEEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSS
T ss_pred             CEEEEeCCcccCCCCcceEEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCC
Confidence            99999999999875322           1135889999999999987765555555555443

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.81  E-value=1.8e-19  Score=166.58  Aligned_cols=180  Identities=17%  Similarity=0.079  Sum_probs=131.5

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++++|||||+|+||++++++|+++| ++|++++|+.......+.    .   ...+.++.+|+++.++++++++    
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~----~---~~~v~~~~~Dl~d~~~l~~~~~----   98 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP----D---HPAVRFSETSITDDALLASLQD----   98 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC----C---CTTEEEECSCTTCHHHHHHCCS----
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc----C---CCceEEEECCCCCHHHHHHHhh----
Confidence            567899999999999999999999999 999999998654221110    0   1238889999999988776654    


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                         .+|+|||+||.....                           .+.+.+++.+++|+.++.++++++...   .+.++
T Consensus        99 ---~~d~Vih~A~~~~~~---------------------------~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~  145 (377)
T 2q1s_A           99 ---EYDYVFHLATYHGNQ---------------------------SSIHDPLADHENNTLTTLKLYERLKHF---KRLKK  145 (377)
T ss_dssp             ---CCSEEEECCCCSCHH---------------------------HHHHCHHHHHHHHTHHHHHHHHHHTTC---SSCCE
T ss_pred             ---CCCEEEECCCccCch---------------------------hhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCCe
Confidence               799999999975321                           234556788999999999999998542   03469


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhh--cCC---CC-CCCchhhhHHHHHHHHHHH
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIA--NRG---WC-PHSSAYKVSKAVINAYTRI  236 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~-~~~~~Y~~sK~al~~l~~~  236 (298)
                      +|++||........                               ...+.  +..   +. .....|+.+|++.+.+++.
T Consensus       146 ~V~~SS~~vyg~~~-------------------------------~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~  194 (377)
T 2q1s_A          146 VVYSAAGCSIAEKT-------------------------------FDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVY  194 (377)
T ss_dssp             EEEEEEC---------------------------------------------CCCCCCCSSCCCSHHHHHHHHHHHHHHH
T ss_pred             EEEeCCHHHcCCCC-------------------------------CCCcCcccccccccccCCCCchHHHHHHHHHHHHH
Confidence            99999965432110                               00011  112   22 3467899999999999999


Q ss_pred             HHHhCCCcEEEEeeCCeeecCCC
Q 022357          237 LAKRYPKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       237 la~e~~~i~vn~v~PG~v~t~~~  259 (298)
                      ++.++ +++++.+.||.|.++..
T Consensus       195 ~~~~~-gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          195 YHKQH-QLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             HHHHH-CCCEEEEEECCEECTTC
T ss_pred             HHHHh-CCCEEEEeeccEECCCC
Confidence            98875 89999999999988754

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.81  E-value=3.7e-19  Score=164.61  Aligned_cols=181  Identities=12%  Similarity=-0.008  Sum_probs=132.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++++|||||+|+||++++++|+++|++|++++|+.......    .  .   ..+.++.+|+++.++++++++      
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~---~~v~~~~~Dl~d~~~~~~~~~------   92 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE----D--M---FCDEFHLVDLRVMENCLKVTE------   92 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG----G--G---TCSEEEECCTTSHHHHHHHHT------
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh----c--c---CCceEEECCCCCHHHHHHHhC------
Confidence            457899999999999999999999999999999986542211    0  0   127889999999998887764      


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       .+|+|||+||......                          ...+.+++.+++|+.++.++++++..    .+.++||
T Consensus        93 -~~d~Vih~A~~~~~~~--------------------------~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V  141 (379)
T 2c5a_A           93 -GVDHVFNLAADMGGMG--------------------------FIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFF  141 (379)
T ss_dssp             -TCSEEEECCCCCCCHH--------------------------HHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEE
T ss_pred             -CCCEEEECceecCccc--------------------------ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEE
Confidence             7899999999753210                          11345567899999999999999865    2446999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCC--CCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRG--WCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      ++||...........     .+.                     ..+.+..  +......|+.+|.+.+.+++.++.++ 
T Consensus       142 ~~SS~~v~~~~~~~~-----~~~---------------------~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-  194 (379)
T 2c5a_A          142 YASSACIYPEFKQLE-----TTN---------------------VSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF-  194 (379)
T ss_dssp             EEEEGGGSCGGGSSS-----SSS---------------------CEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH-
T ss_pred             EEeehheeCCCCCCC-----ccC---------------------CCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH-
Confidence            999966443210000     000                     0000110  22346789999999999999998875 


Q ss_pred             CcEEEEeeCCeeecCC
Q 022357          243 KFCVNCVCPGFVKTDI  258 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~  258 (298)
                      +++++.|.||.+.++.
T Consensus       195 gi~~~ilrp~~v~G~~  210 (379)
T 2c5a_A          195 GIECRIGRFHNIYGPF  210 (379)
T ss_dssp             CCEEEEEEECCEECTT
T ss_pred             CCCEEEEEeCceeCcC
Confidence            8999999999998874

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.80  E-value=1.4e-18  Score=148.52  Aligned_cols=188  Identities=12%  Similarity=0.033  Sum_probs=129.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      ++|||||||+||++++++|+++|++|++++|++.++....    .  .   .+.++++|+++.++  +       .+..+
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~--~---~~~~~~~D~~d~~~--~-------~~~~~   63 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL----G--A---TVATLVKEPLVLTE--A-------DLDSV   63 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT----C--T---TSEEEECCGGGCCH--H-------HHTTC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc----C--C---CceEEecccccccH--h-------hcccC
Confidence            5999999999999999999999999999999976644321    1  1   28899999999987  2       22479


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+||||||.....                                  ....+|+.++..+    ++.+++.+ +++|++|
T Consensus        64 d~vi~~ag~~~~~----------------------------------~~~~~n~~~~~~l----~~a~~~~~-~~~v~~S  104 (224)
T 3h2s_A           64 DAVVDALSVPWGS----------------------------------GRGYLHLDFATHL----VSLLRNSD-TLAVFIL  104 (224)
T ss_dssp             SEEEECCCCCTTS----------------------------------SCTHHHHHHHHHH----HHTCTTCC-CEEEEEC
T ss_pred             CEEEECCccCCCc----------------------------------chhhHHHHHHHHH----HHHHHHcC-CcEEEEe
Confidence            9999999975110                                  0134566665444    44555556 8999999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVN  247 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn  247 (298)
                      |..+.........                            ....+...+.....|+.+|.+.+.+ +.+..+ .+++++
T Consensus       105 S~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~y~~sK~~~e~~-~~~~~~-~~i~~~  154 (224)
T 3h2s_A          105 GSASLAMPGADHP----------------------------MILDFPESAASQPWYDGALYQYYEY-QFLQMN-ANVNWI  154 (224)
T ss_dssp             CGGGSBCTTCSSC----------------------------GGGGCCGGGGGSTTHHHHHHHHHHH-HHHTTC-TTSCEE
T ss_pred             cceeeccCCCCcc----------------------------ccccCCCCCccchhhHHHHHHHHHH-HHHHhc-CCCcEE
Confidence            9766543210000                            0000111112256799999999955 333333 599999


Q ss_pred             EeeCCeeecCCCCC---------------CCCCChhhhhhhhhhhhccCC
Q 022357          248 CVCPGFVKTDINFH---------------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       248 ~v~PG~v~t~~~~~---------------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      .|.||.+.++....               ..+.++++.++..+..+..++
T Consensus       155 ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~  204 (224)
T 3h2s_A          155 GISPSEAFPSGPATSYVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPT  204 (224)
T ss_dssp             EEEECSBCCCCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCC
T ss_pred             EEcCccccCCCcccCceecccccccCCCCCceEeHHHHHHHHHHHhcCcc
Confidence            99999999762211               135789999999999888765

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.80  E-value=5.7e-20  Score=166.99  Aligned_cols=184  Identities=19%  Similarity=0.162  Sum_probs=125.6

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH--HHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE--AVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +|++|||||+|+||++++++|+++|++|+++.|+.++...  ....+.. .   ..+.++++|+++.+++.++++     
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~-~---~~~~~~~~Dl~d~~~~~~~~~-----   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQE-L---GDLKIFRADLTDELSFEAPIA-----   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGG-G---SCEEEEECCTTTSSSSHHHHT-----
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCC-C---CcEEEEecCCCChHHHHHHHc-----
Confidence            5789999999999999999999999999999998654321  1122221 1   127889999999988877764     


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        .+|+|||+|+.....                            ..+..++.+++|+.|++++++++.+..   +.++|
T Consensus        80 --~~D~Vih~A~~~~~~----------------------------~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~  126 (338)
T 2rh8_A           80 --GCDFVFHVATPVHFA----------------------------SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRV  126 (338)
T ss_dssp             --TCSEEEEESSCCCC-------------------------------------CHHHHHHHHHHHHHHHHCT---TCCEE
T ss_pred             --CCCEEEEeCCccCCC----------------------------CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEE
Confidence              589999999854211                            011123478999999999999987642   24799


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCC---------CCCchhhhHHHHHHHHH
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC---------PHSSAYKVSKAVINAYT  234 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~Y~~sK~al~~l~  234 (298)
                      |++||..+..+...      ....                     ..+.+..+.         +....|+.||.+.+.++
T Consensus       127 V~~SS~~~~~~~~~------~~~~---------------------~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~  179 (338)
T 2rh8_A          127 ILTSSAAAVTINQL------DGTG---------------------LVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAA  179 (338)
T ss_dssp             EEECCHHHHHHHHH------TCSC---------------------CCCCTTTTTCC-------CCCCCCTTSCCHHHHHH
T ss_pred             EEEecHHHeecCCc------CCCC---------------------cccChhhccchhhccccCCccchHHHHHHHHHHHH
Confidence            99999764321000      0000                     000000000         11236999999999999


Q ss_pred             HHHHHhCCCcEEEEeeCCeeecCCC
Q 022357          235 RILAKRYPKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       235 ~~la~e~~~i~vn~v~PG~v~t~~~  259 (298)
                      +.++.+ .++++++|.||.|.+|..
T Consensus       180 ~~~~~~-~gi~~~~lrp~~v~Gp~~  203 (338)
T 2rh8_A          180 WKFAEE-NNIDLITVIPTLMAGSSL  203 (338)
T ss_dssp             HHHHHH-HTCCEEEEEECEEESCCS
T ss_pred             HHHHHH-cCCcEEEEeCCceECCCC
Confidence            888766 389999999999999864

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.80  E-value=1.2e-19  Score=166.24  Aligned_cols=180  Identities=15%  Similarity=0.075  Sum_probs=127.6

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |..+.++++|||||+|+||++++++|+++| ++|++++|+.....     ..... .   +. +.+|+++.+.++.+++.
T Consensus        41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-----~~~~~-~---~~-~~~d~~~~~~~~~~~~~  110 (357)
T 2x6t_A           41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----FVNLV-D---LN-IADYMDKEDFLIQIMAG  110 (357)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-----GGGTT-T---SC-CSEEEEHHHHHHHHHTT
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-----hhccc-C---ce-EeeecCcHHHHHHHHhh
Confidence            334567899999999999999999999999 99999999865421     01111 1   23 67899999888777652


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                        ..++++|+|||+||....                             ..+.+++.+++|+.++.++++++.+.    +
T Consensus       111 --~~~~~~d~Vih~A~~~~~-----------------------------~~~~~~~~~~~n~~~~~~ll~a~~~~----~  155 (357)
T 2x6t_A          111 --EEFGDVEAIFHEGACSST-----------------------------TEWDGKYMMDNNYQYSKELLHYCLER----E  155 (357)
T ss_dssp             --CCCSSCCEEEECCSCCCT-----------------------------TCCCHHHHHHHTHHHHHHHHHHHHHH----T
T ss_pred             --cccCCCCEEEECCcccCC-----------------------------ccCCHHHHHHHHHHHHHHHHHHHHHc----C
Confidence              124579999999997532                             11234567899999999999999873    3


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      . ++|++||.........                               ..+.+..+......|+.+|.+.+.+++.++.
T Consensus       156 ~-r~V~~SS~~v~g~~~~-------------------------------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~  203 (357)
T 2x6t_A          156 I-PFLYASSAATYGGRTS-------------------------------DFIESREYEKPLNVFGYSKFLFDEYVRQILP  203 (357)
T ss_dssp             C-CEEEEEEGGGGCSCSS-------------------------------CCCSSGGGCCCSSHHHHHHHHHHHHHHHHGG
T ss_pred             C-eEEEEcchHHhCCCCC-------------------------------CCcCCcCCCCCCChhHHHHHHHHHHHHHHHH
Confidence            4 9999999765432100                               0011111223357899999999999999988


Q ss_pred             hCCCcEEEEeeCCeeecCC
Q 022357          240 RYPKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       240 e~~~i~vn~v~PG~v~t~~  258 (298)
                      ++ +++++.|.||.|.++.
T Consensus       204 ~~-g~~~~ilRp~~v~Gp~  221 (357)
T 2x6t_A          204 EA-NSQIVGFRYFNVYGPR  221 (357)
T ss_dssp             GC-SSCEEEEEECEEESSS
T ss_pred             Hc-CCCEEEEecCeEECCC
Confidence            75 8999999999998764

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.80  E-value=3.4e-19  Score=159.84  Aligned_cols=173  Identities=13%  Similarity=0.046  Sum_probs=131.8

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~--G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ++++|||||+|+||++++++|+++  |++|++++|+.....     +..      .+.++.+|+++.++++++++..   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~------~~~~~~~D~~d~~~~~~~~~~~---   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN------SGPFEVVNALDFNQIEHLVEVH---   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH------SSCEEECCTTCHHHHHHHHHHT---
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC------CCceEEecCCCHHHHHHHHhhc---
Confidence            467999999999999999999999  899999999876522     111      1678899999999988887643   


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        .+|+|||+||.....                            ..+.+.+.+++|+.++.++++++.+    .+.+++
T Consensus        68 --~~d~vih~a~~~~~~----------------------------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~  113 (312)
T 2yy7_A           68 --KITDIYLMAALLSAT----------------------------AEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKI  113 (312)
T ss_dssp             --TCCEEEECCCCCHHH----------------------------HHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEE
T ss_pred             --CCCEEEECCccCCCc----------------------------hhhChHHHHHHHHHHHHHHHHHHHH----cCCCEE
Confidence              689999999975321                            2244567899999999999999875    244699


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      |++||........+.                              ....+..+......|+.+|.+.+.+++.++.++ +
T Consensus       114 v~~SS~~~~~~~~~~------------------------------~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~  162 (312)
T 2yy7_A          114 FWPSSIAVFGPTTPK------------------------------ENTPQYTIMEPSTVYGISKQAGERWCEYYHNIY-G  162 (312)
T ss_dssp             ECCEEGGGCCTTSCS------------------------------SSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH-C
T ss_pred             EEeccHHHhCCCCCC------------------------------CCccccCcCCCCchhHHHHHHHHHHHHHHHHhc-C
Confidence            999997655321000                              001112222346789999999999999998875 8


Q ss_pred             cEEEEeeCCeeecC
Q 022357          244 FCVNCVCPGFVKTD  257 (298)
Q Consensus       244 i~vn~v~PG~v~t~  257 (298)
                      ++++.+.||.+..+
T Consensus       163 ~~~~~lrp~~v~g~  176 (312)
T 2yy7_A          163 VDVRSIRYPGLISW  176 (312)
T ss_dssp             CEEECEEECEEECS
T ss_pred             CcEEEEeCCeEecC
Confidence            99999999999874

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.80  E-value=1.1e-18  Score=173.77  Aligned_cols=191  Identities=18%  Similarity=0.143  Sum_probs=133.7

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +.+++++||||||+|+||++++++|+++|++|++++|+........+.+......  .+.++.+|+++.++++++++.. 
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~v~~v~~Dl~d~~~l~~~~~~~-   83 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH--HIPFYEVDLCDRKGLEKVFKEY-   83 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTS--CCCEEECCTTCHHHHHHHHHHS-
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCC--ceEEEEcCCCCHHHHHHHHHhC-
Confidence            3456899999999999999999999999999999999765433333333221111  2788999999999988877643 


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                          ++|+||||||.....                           ...+...+.+++|+.++.++++++..    .+.+
T Consensus        84 ----~~D~Vih~A~~~~~~---------------------------~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~  128 (699)
T 1z45_A           84 ----KIDSVIHFAGLKAVG---------------------------ESTQIPLRYYHNNILGTVVLLELMQQ----YNVS  128 (699)
T ss_dssp             ----CCCEEEECCSCCCHH---------------------------HHHHSHHHHHHHHHHHHHHHHHHHHH----HTCC
T ss_pred             ----CCCEEEECCcccCcC---------------------------ccccCHHHHHHHHHHHHHHHHHHHHH----cCCC
Confidence                799999999975321                           01223346789999999999887754    2457


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..........      .                     ....+.+..+......|+.||++.+.+++.++.++
T Consensus       129 ~iV~~SS~~vyg~~~~~------~---------------------~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~  181 (699)
T 1z45_A          129 KFVFSSSATVYGDATRF------P---------------------NMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD  181 (699)
T ss_dssp             EEEEEEEGGGGCCGGGS------T---------------------TCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEEEECcHHHhCCCccc------c---------------------ccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc
Confidence            99999997654211000      0                     00001122233446789999999999999999886


Q ss_pred             -CCcEEEEeeCCeeecC
Q 022357          242 -PKFCVNCVCPGFVKTD  257 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~  257 (298)
                       .++++..+.|+.+..+
T Consensus       182 ~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          182 KKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             TTSCEEEEEEECEEECC
T ss_pred             cCCCcEEEEEeccccCC
Confidence             6899999998877654

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.79  E-value=2.6e-19  Score=161.01  Aligned_cols=201  Identities=13%  Similarity=0.032  Sum_probs=117.5

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++++|||||+|+||++++++|+++|++|++++|+...           .    .  ++.+|+++.+++.++++..     
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~----~--~~~~Dl~d~~~~~~~~~~~-----   59 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P----K--FEQVNLLDSNAVHHIIHDF-----   59 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CHHHHHHH-----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C----C--eEEecCCCHHHHHHHHHhh-----
Confidence            5789999999999999999999999999999987543           0    1  5678999999988887754     


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|+||||||.....                           .+.+.+++.+++|+.++.++++++.+.    + +++|+
T Consensus        60 ~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~  107 (315)
T 2ydy_A           60 QPHVIVHCAAERRPD---------------------------VVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIY  107 (315)
T ss_dssp             CCSEEEECC----------------------------------------------CHHHHHHHHHHHHH----T-CEEEE
T ss_pred             CCCEEEECCcccChh---------------------------hhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEE
Confidence            799999999975321                           133556678999999999999999873    2 59999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcE
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC  245 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~  245 (298)
                      +||.....+.                                .+.+.+..+......|+.+|++.+.+++.++.++..+|
T Consensus       108 ~SS~~v~~~~--------------------------------~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~lR  155 (315)
T 2ydy_A          108 ISSDYVFDGT--------------------------------NPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLR  155 (315)
T ss_dssp             EEEGGGSCSS--------------------------------SCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             EchHHHcCCC--------------------------------CCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCeEEEe
Confidence            9997765331                                01112222334467899999999999999876665667


Q ss_pred             EEEeeCCeeec---CCC---------CC----------CCCCChhhhhhhhhhhhccC--CCCCcceEeccC
Q 022357          246 VNCVCPGFVKT---DIN---------FH----------AGILSVEEGAESPVKLALLP--DGGPTGRFFLRK  293 (298)
Q Consensus       246 vn~v~PG~v~t---~~~---------~~----------~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~l~~  293 (298)
                      ++.|. |+..+   .+.         ..          ..+..+++.++..+..+..+  .....+.+.+.+
T Consensus       156 ~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~  226 (315)
T 2ydy_A          156 IPILY-GEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSG  226 (315)
T ss_dssp             ECSEE-CSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCC
T ss_pred             eeeee-CCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcC
Confidence            77666 55444   110         00          12346777777777666542  122344555544

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.79  E-value=5.9e-19  Score=160.34  Aligned_cols=194  Identities=19%  Similarity=0.097  Sum_probs=131.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.++++|||||+|+||++++++|+++|++|++++|+.....+.+..+       ..+.++.+|+++.++++++++..  
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~-------~~~~~~~~Dl~d~~~~~~~~~~~--   88 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH-------PNLTFVEGSIADHALVNQLIGDL--   88 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCC-------TTEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhc-------CCceEEEEeCCCHHHHHHHHhcc--
Confidence            356789999999999999999999999999999999864321111100       12788999999999988887642  


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                         ++|+||||||.....                            +.++++  +++|+.++.++++++.+    .+.++
T Consensus        89 ---~~D~vih~A~~~~~~----------------------------~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~  131 (333)
T 2q1w_A           89 ---QPDAVVHTAASYKDP----------------------------DDWYND--TLTNCVGGSNVVQAAKK----NNVGR  131 (333)
T ss_dssp             ---CCSEEEECCCCCSCT----------------------------TCHHHH--HHHHTHHHHHHHHHHHH----TTCSE
T ss_pred             ---CCcEEEECceecCCC----------------------------ccCChH--HHHHHHHHHHHHHHHHH----hCCCE
Confidence               799999999976421                            112222  89999999999999977    24579


Q ss_pred             EEEEccCcccc----cCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHH-H
Q 022357          163 LVNLSSYVSAL----KDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI-L  237 (298)
Q Consensus       163 iv~vsS~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~-l  237 (298)
                      ||++||.....    ...                                +.+.+.. .+....|+.+|++.+.+++. +
T Consensus       132 iV~~SS~~~~g~~~~~~~--------------------------------~~~~E~~-~p~~~~Y~~sK~~~E~~~~~s~  178 (333)
T 2q1w_A          132 FVYFQTALCYGVKPIQQP--------------------------------VRLDHPR-NPANSSYAISKSANEDYLEYSG  178 (333)
T ss_dssp             EEEEEEGGGGCSCCCSSS--------------------------------BCTTSCC-CCTTCHHHHHHHHHHHHHHHHT
T ss_pred             EEEECcHHHhCCCcccCC--------------------------------CCcCCCC-CCCCCchHHHHHHHHHHHHhhh
Confidence            99999966542    110                                0001111 12227899999999999988 6


Q ss_pred             HHhCCCcEEEEeeCCeeecCCCC----------------------CCCCCChhhhhhhhhhhhccC
Q 022357          238 AKRYPKFCVNCVCPGFVKTDINF----------------------HAGILSVEEGAESPVKLALLP  281 (298)
Q Consensus       238 a~e~~~i~vn~v~PG~v~t~~~~----------------------~~~~~~~~~~a~~~~~~~~~~  281 (298)
                      +      .+..|.|+.+..+...                      ...+..+++.++..+..+..+
T Consensus       179 ~------~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~  238 (333)
T 2q1w_A          179 L------DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGV  238 (333)
T ss_dssp             C------CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHHHHHTTC
T ss_pred             C------CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHHHHHHhcC
Confidence            6      3445555544443210                      012346677777777766644

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.79  E-value=1.1e-19  Score=154.33  Aligned_cols=176  Identities=13%  Similarity=0.034  Sum_probs=131.6

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      |+. ++++++||||+|+||++++++|+++|+  +|++++|++.+          ..   ..+.++.+|+++.+++++++ 
T Consensus         1 M~~-~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~---~~~~~~~~D~~~~~~~~~~~-   65 (215)
T 2a35_A            1 MHS-TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EH---PRLDNPVGPLAELLPQLDGS-   65 (215)
T ss_dssp             ----CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CC---TTEECCBSCHHHHGGGCCSC-
T ss_pred             CCC-CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cC---CCceEEeccccCHHHHHHhh-
Confidence            443 568999999999999999999999998  99999998764          01   12788899999887765543 


Q ss_pred             HHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC
Q 022357           79 FIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS  158 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  158 (298)
                              +|+||||||....                             +.+.+++.+++|+.++..+++++.+.    
T Consensus        66 --------~d~vi~~a~~~~~-----------------------------~~~~~~~~~~~n~~~~~~l~~~~~~~----  104 (215)
T 2a35_A           66 --------IDTAFCCLGTTIK-----------------------------EAGSEEAFRAVDFDLPLAVGKRALEM----  104 (215)
T ss_dssp             --------CSEEEECCCCCHH-----------------------------HHSSHHHHHHHHTHHHHHHHHHHHHT----
T ss_pred             --------hcEEEECeeeccc-----------------------------cCCCHHHHHHhhHHHHHHHHHHHHHc----
Confidence                    8999999996521                             22345677899999999999998653    


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                      +.+++|++||.....                                            .....|+.+|++++.+++.  
T Consensus       105 ~~~~~v~~Ss~~~~~--------------------------------------------~~~~~y~~sK~~~e~~~~~--  138 (215)
T 2a35_A          105 GARHYLVVSALGADA--------------------------------------------KSSIFYNRVKGELEQALQE--  138 (215)
T ss_dssp             TCCEEEEECCTTCCT--------------------------------------------TCSSHHHHHHHHHHHHHTT--
T ss_pred             CCCEEEEECCcccCC--------------------------------------------CCccHHHHHHHHHHHHHHH--
Confidence            446999999976542                                            2246899999999998865  


Q ss_pred             HhCCCcE-EEEeeCCeeecCCCCC-----C------------CCCChhhhhhhhhhhhccC
Q 022357          239 KRYPKFC-VNCVCPGFVKTDINFH-----A------------GILSVEEGAESPVKLALLP  281 (298)
Q Consensus       239 ~e~~~i~-vn~v~PG~v~t~~~~~-----~------------~~~~~~~~a~~~~~~~~~~  281 (298)
                         .+++ ++.|.||.+.++....     .            .+..+++.++..+..+..+
T Consensus       139 ---~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  196 (215)
T 2a35_A          139 ---QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEE  196 (215)
T ss_dssp             ---SCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             ---cCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcC
Confidence               2888 9999999999874320     0            0124466666666666654

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.79  E-value=3.7e-18  Score=145.36  Aligned_cols=185  Identities=17%  Similarity=0.160  Sum_probs=124.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      ++|||||||+||++++++|+++|++|++++|+++++....       .   .+.++++|+++.++  +.       +..+
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~---~~~~~~~D~~d~~~--~~-------~~~~   62 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------K---DINILQKDIFDLTL--SD-------LSDQ   62 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------S---SSEEEECCGGGCCH--HH-------HTTC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------C---CCeEEeccccChhh--hh-------hcCC
Confidence            6999999999999999999999999999999987644321       1   28899999999987  22       2479


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+||||||....                                    ...+|+.++.    .+++.+++.+.+++|++|
T Consensus        63 d~vi~~ag~~~~------------------------------------~~~~~~~~~~----~l~~a~~~~~~~~~v~~S  102 (221)
T 3ew7_A           63 NVVVDAYGISPD------------------------------------EAEKHVTSLD----HLISVLNGTVSPRLLVVG  102 (221)
T ss_dssp             SEEEECCCSSTT------------------------------------TTTSHHHHHH----HHHHHHCSCCSSEEEEEC
T ss_pred             CEEEECCcCCcc------------------------------------ccchHHHHHH----HHHHHHHhcCCceEEEEe
Confidence            999999997421                                    1334555554    444555555668999999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVN  247 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn  247 (298)
                      |..+..+.....                              ...+..+......|+.+|.+.+.+ ..+..+..+++++
T Consensus       103 S~~~~~~~~~~~------------------------------~~~~~~~~~~~~~y~~~k~~~e~~-~~~~~~~~gi~~~  151 (221)
T 3ew7_A          103 GAASLQIDEDGN------------------------------TLLESKGLREAPYYPTARAQAKQL-EHLKSHQAEFSWT  151 (221)
T ss_dssp             CCC-------------------------------------------------CCCSCCHHHHHHHH-HHHHTTTTTSCEE
T ss_pred             cceEEEcCCCCc------------------------------cccccCCCCCHHHHHHHHHHHHHH-HHHHhhccCccEE
Confidence            987654321000                              000011112346699999999987 3444424699999


Q ss_pred             EeeCCeeecCCCCC----------------CCCCChhhhhhhhhhhhccCC
Q 022357          248 CVCPGFVKTDINFH----------------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       248 ~v~PG~v~t~~~~~----------------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      .|.||.+.++....                ..+.++++.++..+..+..++
T Consensus       152 ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~  202 (221)
T 3ew7_A          152 YISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPN  202 (221)
T ss_dssp             EEECSSCCCCC---------------------CCCHHHHHHHHHHHHHSCS
T ss_pred             EEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCcc
Confidence            99999998862110                125788999999998888765

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.78  E-value=5.3e-18  Score=152.37  Aligned_cols=198  Identities=14%  Similarity=0.125  Sum_probs=144.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      +++|||||+|+||++++++|+++|++|++++|++....  ..          .+.++.+|++ .+++.++++       .
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~----------~~~~~~~Dl~-~~~~~~~~~-------~   62 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN----------DYEYRVSDYT-LEDLINQLN-------D   62 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----------------CCEEEECCCC-HHHHHHHTT-------T
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC----------ceEEEEcccc-HHHHHHhhc-------C
Confidence            68999999999999999999999999999999943322  21          2889999999 888777765       7


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+|||+|+.....                               ...+.+++|+.++.++++++..    .+.+++|++
T Consensus        63 ~d~Vih~a~~~~~~-------------------------------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~  107 (311)
T 3m2p_A           63 VDAVVHLAATRGSQ-------------------------------GKISEFHDNEILTQNLYDACYE----NNISNIVYA  107 (311)
T ss_dssp             CSEEEECCCCCCSS-------------------------------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEE
T ss_pred             CCEEEEccccCCCC-------------------------------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEE
Confidence            99999999976432                               2235688999999999998865    344689999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      ||.......                               ....+.+..+......|+.+|.+.+.+++.++.+. ++++
T Consensus       108 SS~~vyg~~-------------------------------~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~  155 (311)
T 3m2p_A          108 STISAYSDE-------------------------------TSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKK-GLCI  155 (311)
T ss_dssp             EEGGGCCCG-------------------------------GGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHS-CCEE
T ss_pred             ccHHHhCCC-------------------------------CCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc-CCCE
Confidence            996544321                               00112223334456889999999999999999874 9999


Q ss_pred             EEeeCCeeecCCCCC--------------------------CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          247 NCVCPGFVKTDINFH--------------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       247 n~v~PG~v~t~~~~~--------------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +.+.||.+..+....                          ..+...++.++..+..+..+.  ..+.+.+.+
T Consensus       156 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~--~~~~~~i~~  226 (311)
T 3m2p_A          156 KNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK--VSGTFNIGS  226 (311)
T ss_dssp             EEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT--CCEEEEECC
T ss_pred             EEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC--CCCeEEeCC
Confidence            999999998864321                          013456677777777776544  444554544

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.78  E-value=1.4e-18  Score=157.91  Aligned_cols=173  Identities=12%  Similarity=-0.014  Sum_probs=127.0

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH-HHHHHHHHHHHHhc
Q 022357            7 KYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKTQF   84 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~~~   84 (298)
                      +++|||||+|+||++++++|+++ |++|++++|+..+.....    .    ...+.++.+|+++. +.++++++      
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----~----~~~~~~~~~D~~~~~~~~~~~~~------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----N----HPHFHFVEGDISIHSEWIEYHVK------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----T----CTTEEEEECCTTTCSHHHHHHHH------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh----c----CCCeEEEeccccCcHHHHHhhcc------
Confidence            47999999999999999999998 899999999876543211    1    11388999999984 55666654      


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       .+|+|||+||...+.                           ...+.+.+.+++|+.++.++++++..    .+ +++|
T Consensus        67 -~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v  113 (345)
T 2bll_A           67 -KCDVVLPLVAIATPI---------------------------EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRII  113 (345)
T ss_dssp             -HCSEEEECBCCCCHH---------------------------HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEE
T ss_pred             -CCCEEEEcccccCcc---------------------------chhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEE
Confidence             579999999975321                           12234567889999999999998865    23 7999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCC-----C--CCCchhhhHHHHHHHHHHHH
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGW-----C--PHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~Y~~sK~al~~l~~~l  237 (298)
                      ++||.........                               ..+.+..+     +  .....|+.+|.+.+.+++.+
T Consensus       114 ~~SS~~v~g~~~~-------------------------------~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  162 (345)
T 2bll_A          114 FPSTSEVYGMCSD-------------------------------KYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAY  162 (345)
T ss_dssp             EECCGGGGBTCCC-------------------------------SSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHH
T ss_pred             EEecHHHcCCCCC-------------------------------CCcCCcccccccCcccCcccccHHHHHHHHHHHHHH
Confidence            9999765432100                               00001110     0  12348999999999999999


Q ss_pred             HHhCCCcEEEEeeCCeeecCC
Q 022357          238 AKRYPKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       238 a~e~~~i~vn~v~PG~v~t~~  258 (298)
                      +.++ +++++.+.||.|.++.
T Consensus       163 ~~~~-~~~~~ilrp~~v~G~~  182 (345)
T 2bll_A          163 GEKE-GLQFTLFRPFNWMGPR  182 (345)
T ss_dssp             HHHH-CCCEEEEEECSEECSS
T ss_pred             HHhc-CCCEEEEcCCcccCCC
Confidence            8875 8999999999998765

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.77  E-value=3.8e-18  Score=153.40  Aligned_cols=167  Identities=20%  Similarity=0.174  Sum_probs=125.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            8 YAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~--G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++|||||+|+||++++++|+++  |++|++++|+.....              .+.++.+|+++.++++++++..     
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--------------~~~~~~~D~~d~~~~~~~~~~~-----   61 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG--------------GIKFITLDVSNRDEIDRAVEKY-----   61 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT--------------TCCEEECCTTCHHHHHHHHHHT-----
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc--------------CceEEEecCCCHHHHHHHHhhc-----
Confidence            4899999999999999999998  899999998765421              1668899999999988887642     


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      .+|+|||+||....                            ...+.+.+.+++|+.++.++++++.+    .+.+++|+
T Consensus        62 ~~d~vih~a~~~~~----------------------------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~  109 (317)
T 3ajr_A           62 SIDAIFHLAGILSA----------------------------KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVI  109 (317)
T ss_dssp             TCCEEEECCCCCHH----------------------------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEE
T ss_pred             CCcEEEECCcccCC----------------------------ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEE
Confidence            79999999997531                            12244567899999999999998865    24479999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcE
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC  245 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~  245 (298)
                      +||........+.                              ....+..+......|+.||.+.+.+++.++.++ +++
T Consensus       110 ~SS~~~~~~~~~~------------------------------~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~  158 (317)
T 3ajr_A          110 PSTIGVFGPETPK------------------------------NKVPSITITRPRTMFGVTKIAAELLGQYYYEKF-GLD  158 (317)
T ss_dssp             EEEGGGCCTTSCS------------------------------SSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCE
T ss_pred             ecCHHHhCCCCCC------------------------------CCccccccCCCCchHHHHHHHHHHHHHHHHHhc-CCe
Confidence            9997765432000                              001112223346789999999999999988774 899


Q ss_pred             EEEeeCCeeec
Q 022357          246 VNCVCPGFVKT  256 (298)
Q Consensus       246 vn~v~PG~v~t  256 (298)
                      ++.+.|+.+..
T Consensus       159 ~~~lR~~~~~g  169 (317)
T 3ajr_A          159 VRSLRYPGIIS  169 (317)
T ss_dssp             EEEEEECEEEC
T ss_pred             EEEEecCcEec
Confidence            99997655544

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.76  E-value=3.1e-18  Score=155.96  Aligned_cols=177  Identities=17%  Similarity=0.043  Sum_probs=124.4

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +++.++++|||||+|+||++++++|+++|++|++++|+..........+..    ...+.++.+|+++..          
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~----------   88 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG----HENFELINHDVVEPL----------   88 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTT----CTTEEEEECCTTSCC----------
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhcc----CCceEEEeCccCChh----------
Confidence            346678999999999999999999999999999999975432211111111    113888999998752          


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                        +..+|+|||+||.....                           ...+.+.+.+++|+.++.++++++...    + .
T Consensus        89 --~~~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~  134 (343)
T 2b69_A           89 --YIEVDQIYHLASPASPP---------------------------NYMYNPIKTLKTNTIGTLNMLGLAKRV----G-A  134 (343)
T ss_dssp             --CCCCSEEEECCSCCSHH---------------------------HHTTCHHHHHHHHHHHHHHHHHHHHHH----T-C
T ss_pred             --hcCCCEEEECccccCch---------------------------hhhhCHHHHHHHHHHHHHHHHHHHHHh----C-C
Confidence              35799999999975321                           011234567899999999999998763    2 4


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcC-----CCCCCCchhhhHHHHHHHHHHH
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANR-----GWCPHSSAYKVSKAVINAYTRI  236 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Y~~sK~al~~l~~~  236 (298)
                      ++|++||.........                               ..+.+.     .+......|+.+|++.+.+++.
T Consensus       135 ~~v~~SS~~v~g~~~~-------------------------------~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~  183 (343)
T 2b69_A          135 RLLLASTSEVYGDPEV-------------------------------HPQSEDYWGHVNPIGPRACYDEGKRVAETMCYA  183 (343)
T ss_dssp             EEEEEEEGGGGBSCSS-------------------------------SSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             cEEEECcHHHhCCCCC-------------------------------CCCcccccccCCCCCCCCchHHHHHHHHHHHHH
Confidence            9999999654422100                               000011     1223457899999999999999


Q ss_pred             HHHhCCCcEEEEeeCCeeecCC
Q 022357          237 LAKRYPKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       237 la~e~~~i~vn~v~PG~v~t~~  258 (298)
                      ++.++ +++++.+.||.+.++.
T Consensus       184 ~~~~~-~~~~~ilrp~~v~G~~  204 (343)
T 2b69_A          184 YMKQE-GVEVRVARIFNTFGPR  204 (343)
T ss_dssp             HHHHH-CCCEEEEEECCEECTT
T ss_pred             HHHHh-CCcEEEEEEcceeCcC
Confidence            98875 8999999999998874

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.76  E-value=5.1e-18  Score=150.57  Aligned_cols=187  Identities=16%  Similarity=0.122  Sum_probs=138.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      ++|||||+|+||++++++|+++|++|++++|.                        ++|+++.++++++++..     ++
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~D~~d~~~~~~~~~~~-----~~   57 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK------------------------LLDITNISQVQQVVQEI-----RP   57 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT------------------------TSCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc------------------------ccCCCCHHHHHHHHHhc-----CC
Confidence            89999999999999999999999999999992                        37999999998888765     79


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+|||+||.....                           ...+.+.+.+++|+.++.++++++...     +.++|++|
T Consensus        58 d~vi~~a~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~v~~S  105 (287)
T 3sc6_A           58 HIIIHCAAYTKVD---------------------------QAEKERDLAYVINAIGARNVAVASQLV-----GAKLVYIS  105 (287)
T ss_dssp             SEEEECCCCCCHH---------------------------HHTTCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEE
T ss_pred             CEEEECCcccChH---------------------------HHhcCHHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEc
Confidence            9999999976421                           123456678999999999999998663     24899999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVN  247 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn  247 (298)
                      |.....+..                               ...+.+..++.....|+.+|.+.+.+++.++.     +++
T Consensus       106 S~~vy~~~~-------------------------------~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~  149 (287)
T 3sc6_A          106 TDYVFQGDR-------------------------------PEGYDEFHNPAPINIYGASKYAGEQFVKELHN-----KYF  149 (287)
T ss_dssp             EGGGSCCCC-------------------------------SSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-----SEE
T ss_pred             hhhhcCCCC-------------------------------CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-----CcE
Confidence            976543220                               01122233345567999999999999988765     357


Q ss_pred             EeeCCeeecCCCCC----------------------CCCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          248 CVCPGFVKTDINFH----------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       248 ~v~PG~v~t~~~~~----------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      .+.||.+..+....                      ..+..+++.++..+..+..+.   .+.+.+.++
T Consensus       150 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~  215 (287)
T 3sc6_A          150 IVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL---YGTYHVSNT  215 (287)
T ss_dssp             EEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC---CEEEECCCB
T ss_pred             EEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC---CCeEEEcCC
Confidence            78888887763211                      123457888888888777654   555555544

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.75  E-value=1.5e-17  Score=158.77  Aligned_cols=190  Identities=15%  Similarity=0.082  Sum_probs=127.5

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHC---CCEEEEEecCchhhHHHHHHHHhcCCC-------------CcceeEEEecc
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASK---GITVVLTARDEKRGLEAVEKLKASGVD-------------PELLLFHQLDI   67 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~---G~~Vii~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl   67 (298)
                      ..+++||||||+|+||++++++|+++   |++|++++|+...... .+.+......             ...+.++.+|+
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDA-RRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHH-HHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHH-HHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            45789999999999999999999999   9999999998764322 2222221100             12389999999


Q ss_pred             C------cHHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhc
Q 022357           68 S------DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNY  141 (298)
Q Consensus        68 s------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~  141 (298)
                      +      +.+.++.+++       ++|+||||||....                               +.+.+.+++|+
T Consensus       150 ~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~-------------------------------~~~~~~~~~Nv  191 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA-------------------------------FPYHELFGPNV  191 (478)
T ss_dssp             TSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB-------------------------------SSCCEEHHHHH
T ss_pred             CCcccCCCHHHHHHHHc-------CCCEEEECccccCC-------------------------------cCHHHHHHHHH
Confidence            9      4455555554       58999999997643                               12235688999


Q ss_pred             eeHHHHHHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCc
Q 022357          142 YGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSS  221 (298)
Q Consensus       142 ~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (298)
                      .++.++++++..    .+.+++|++||........+ .   .+...  ...       ...       ............
T Consensus       192 ~gt~~ll~aa~~----~~~~~~V~iSS~~v~~~~~~-~---~~~E~--~~~-------~p~-------~~~~~~~~~~~~  247 (478)
T 4dqv_A          192 AGTAELIRIALT----TKLKPFTYVSTADVGAAIEP-S---AFTED--ADI-------RVI-------SPTRTVDGGWAG  247 (478)
T ss_dssp             HHHHHHHHHHTS----SSCCCEEEEEEGGGGTTSCT-T---TCCSS--SCH-------HHH-------CCEEECCTTSEE
T ss_pred             HHHHHHHHHHHh----CCCCeEEEEeehhhcCccCC-C---CcCCc--ccc-------ccc-------Cccccccccccc
Confidence            999999998865    33469999999654322100 0   00000  000       000       000000001235


Q ss_pred             hhhhHHHHHHHHHHHHHHhCCCcEEEEeeCCeeecC
Q 022357          222 AYKVSKAVINAYTRILAKRYPKFCVNCVCPGFVKTD  257 (298)
Q Consensus       222 ~Y~~sK~al~~l~~~la~e~~~i~vn~v~PG~v~t~  257 (298)
                      .|+.||.+.+.+++.++.+. +++++.|.||.|..+
T Consensus       248 ~Y~~sK~~~E~~~~~~~~~~-gi~~~ivRpg~v~G~  282 (478)
T 4dqv_A          248 GYGTSKWAGEVLLREANDLC-ALPVAVFRCGMILAD  282 (478)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEECC
T ss_pred             chHHHHHHHHHHHHHHHHHh-CCCeEEEECceeeCC
Confidence            69999999999999998875 899999999999875

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.75  E-value=1.8e-17  Score=149.16  Aligned_cols=164  Identities=16%  Similarity=0.123  Sum_probs=124.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++++|||||+|+||++++++|+++|++|+++.|+.                       .+|+++.++++++++..     
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-----------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-----------------------cCCccCHHHHHHHHHhc-----
Confidence            47899999999999999999999999999988752                       26999999988887654     


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      .+|+|||+||.....                          ....+...+.+++|+.++.++++++...    +.+++|+
T Consensus        55 ~~d~vih~a~~~~~~--------------------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~  104 (321)
T 1e6u_A           55 RIDQVYLAAAKVGGI--------------------------VANNTYPADFIYQNMMIESNIIHAAHQN----DVNKLLF  104 (321)
T ss_dssp             CCSEEEECCCCCCCH--------------------------HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEE
T ss_pred             CCCEEEEcCeecCCc--------------------------chhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCeEEE
Confidence            799999999975321                          0123445677999999999999988662    3469999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCC----CC-CCCchhhhHHHHHHHHHHHHHHh
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRG----WC-PHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      +||.........                               ..+.+..    .+ +....|+.+|.+.+.+++.++.+
T Consensus       105 ~SS~~vyg~~~~-------------------------------~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~  153 (321)
T 1e6u_A          105 LGSSCIYPKLAK-------------------------------QPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQ  153 (321)
T ss_dssp             ECCGGGSCTTCC-------------------------------SSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred             EccHHHcCCCCC-------------------------------CCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence            999765432100                               0000110    11 22358999999999999999877


Q ss_pred             CCCcEEEEeeCCeeecCCC
Q 022357          241 YPKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       241 ~~~i~vn~v~PG~v~t~~~  259 (298)
                      + +++++.+.||.+..+..
T Consensus       154 ~-~~~~~ilrp~~v~G~~~  171 (321)
T 1e6u_A          154 Y-GRDYRSVMPTNLYGPHD  171 (321)
T ss_dssp             H-CCEEEEEEECEEESTTC
T ss_pred             h-CCCEEEEEeCCcCCcCC
Confidence            5 89999999999988643

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.75  E-value=9.6e-18  Score=149.14  Aligned_cols=187  Identities=21%  Similarity=0.194  Sum_probs=133.7

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .+++|||||+|+||++++++|+++|++|++++|+                        ++|+++.++++++++..     
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~Dl~d~~~~~~~~~~~-----   62 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------------DLDITNVLAVNKFFNEK-----   62 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc------------------------cCCCCCHHHHHHHHHhc-----
Confidence            4789999999999999999999999999999986                        27999999988887754     


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|+||||||.....                           ...+.+.+.+++|+.++.++++++.+.    + .++|+
T Consensus        63 ~~d~vih~A~~~~~~---------------------------~~~~~~~~~~~~nv~~~~~l~~a~~~~----~-~~iv~  110 (292)
T 1vl0_A           63 KPNVVINCAAHTAVD---------------------------KCEEQYDLAYKINAIGPKNLAAAAYSV----G-AEIVQ  110 (292)
T ss_dssp             CCSEEEECCCCCCHH---------------------------HHHHCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEE
T ss_pred             CCCEEEECCccCCHH---------------------------HHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEE
Confidence            799999999975321                           234566788999999999999998773    3 39999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcE
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC  245 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~  245 (298)
                      +||.....+..                               ...+.+..++.....|+.+|.+.+.+++.++.+     
T Consensus       111 ~SS~~v~~~~~-------------------------------~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----  154 (292)
T 1vl0_A          111 ISTDYVFDGEA-------------------------------KEPITEFDEVNPQSAYGKTKLEGENFVKALNPK-----  154 (292)
T ss_dssp             EEEGGGSCSCC-------------------------------SSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSS-----
T ss_pred             echHHeECCCC-------------------------------CCCCCCCCCCCCccHHHHHHHHHHHHHHhhCCC-----
Confidence            99976543220                               001112223334678999999999999987653     


Q ss_pred             EEEeeCCeeecCCCCC----------------------CCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          246 VNCVCPGFVKTDINFH----------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       246 vn~v~PG~v~t~~~~~----------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +..|.|+.+..+ ...                      ..+..+++.++..+..+..+   ..+.+.+.+
T Consensus       155 ~~~lR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~~~~~i~~  220 (292)
T 1vl0_A          155 YYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK---NYGTFHCTC  220 (292)
T ss_dssp             EEEEEECSEESS-SSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT---CCEEEECCC
T ss_pred             eEEEeeeeeeCC-CcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC---CCcEEEecC
Confidence            455556655533 100                      12345677777777766543   344444444

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.74  E-value=9.6e-18  Score=147.49  Aligned_cols=191  Identities=16%  Similarity=0.127  Sum_probs=136.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +++||||+|+||++++++|++ |++|++++|++...            .  .   +.+|+++.++++++++.+     ++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~------------~--~---~~~Dl~~~~~~~~~~~~~-----~~   58 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ------------G--G---YKLDLTDFPRLEDFIIKK-----RP   58 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT------------T--C---EECCTTSHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC------------C--C---ceeccCCHHHHHHHHHhc-----CC
Confidence            599999999999999999995 99999999987420            1  1   789999999999888765     79


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+||||||.....                           ...+.+++.+++|+.++.++++++.+    .+ ++||++|
T Consensus        59 d~vi~~a~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~S  106 (273)
T 2ggs_A           59 DVIINAAAMTDVD---------------------------KCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHIS  106 (273)
T ss_dssp             SEEEECCCCCCHH---------------------------HHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEE
T ss_pred             CEEEECCcccChh---------------------------hhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEe
Confidence            9999999975321                           23466778899999999999999975    23 5999999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVN  247 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn  247 (298)
                      |.....+..                                +.+.+..++.....|+.+|++++.+++.  .++..+|++
T Consensus       107 S~~~~~~~~--------------------------------~~~~e~~~~~~~~~Y~~sK~~~e~~~~~--~~~~~iR~~  152 (273)
T 2ggs_A          107 TDYVFDGEK--------------------------------GNYKEEDIPNPINYYGLSKLLGETFALQ--DDSLIIRTS  152 (273)
T ss_dssp             EGGGSCSSS--------------------------------CSBCTTSCCCCSSHHHHHHHHHHHHHCC--TTCEEEEEC
T ss_pred             cceeEcCCC--------------------------------CCcCCCCCCCCCCHHHHHHHHHHHHHhC--CCeEEEecc
Confidence            987654321                                0112222333467899999999999987  333456666


Q ss_pred             EeeCCeeecCCC--------C---------CCCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          248 CVCPGFVKTDIN--------F---------HAGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       248 ~v~PG~v~t~~~--------~---------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      .|. |  .+++.        .         ...+..+++.++..+..+..+.   .+.+.+.+
T Consensus       153 ~v~-G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~---~g~~~i~~  209 (273)
T 2ggs_A          153 GIF-R--NKGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELRK---TGIIHVAG  209 (273)
T ss_dssp             CCB-S--SSSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHTC---CEEEECCC
T ss_pred             ccc-c--ccHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcCc---CCeEEECC
Confidence            666 3  22211        0         1235678888888887776542   44444443

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.74  E-value=1.1e-17  Score=165.63  Aligned_cols=177  Identities=12%  Similarity=0.002  Sum_probs=130.0

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHH-HHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLAS-VSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~-v~~~~~~~~   81 (298)
                      +++++++||||+|+||++++++|+++ |++|++++|+........    .    ...+.++.+|+++.++ ++++++   
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~----~----~~~v~~v~~Dl~d~~~~~~~~~~---  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----N----HPHFHFVEGDISIHSEWIEYHVK---  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT----T----CTTEEEEECCTTTCHHHHHHHHH---
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc----c----CCceEEEECCCCCcHHHHHHhhc---
Confidence            46789999999999999999999998 899999999876532211    1    1138889999998764 555554   


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                          .+|+||||||.....                           ...+...+.+++|+.++.++++++...    + +
T Consensus       382 ----~~D~Vih~Aa~~~~~---------------------------~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~-~  425 (660)
T 1z7e_A          382 ----KCDVVLPLVAIATPI---------------------------EYTRNPLRVFELDFEENLRIIRYCVKY----R-K  425 (660)
T ss_dssp             ----HCSEEEECCCCCCTH---------------------------HHHHSHHHHHHHHTHHHHHHHHHHHHT----T-C
T ss_pred             ----CCCEEEECceecCcc---------------------------ccccCHHHHHHhhhHHHHHHHHHHHHh----C-C
Confidence                579999999975421                           122345678999999999999998662    3 7


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCC-------CCCCchhhhHHHHHHHHH
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGW-------CPHSSAYKVSKAVINAYT  234 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~Y~~sK~al~~l~  234 (298)
                      ++|++||.........                               ..+.+..+       ......|+.||.+.+.++
T Consensus       426 r~V~~SS~~vyg~~~~-------------------------------~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~  474 (660)
T 1z7e_A          426 RIIFPSTSEVYGMCSD-------------------------------KYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI  474 (660)
T ss_dssp             EEEEECCGGGGBTCCS-------------------------------SSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHH
T ss_pred             EEEEEecHHHcCCCCC-------------------------------cccCCCccccccCcccCCCCCcHHHHHHHHHHH
Confidence            9999999765432100                               00011110       022457999999999999


Q ss_pred             HHHHHhCCCcEEEEeeCCeeecCCC
Q 022357          235 RILAKRYPKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       235 ~~la~e~~~i~vn~v~PG~v~t~~~  259 (298)
                      +.++.++ +++++.+.||.+.++..
T Consensus       475 ~~~~~~~-gi~~~ilRpg~v~Gp~~  498 (660)
T 1z7e_A          475 WAYGEKE-GLQFTLFRPFNWMGPRL  498 (660)
T ss_dssp             HHHHHHH-CCCEEEEEECSEESTTS
T ss_pred             HHHHHHc-CCCEEEECCCcccCCCc
Confidence            9998875 89999999999988653

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.72  E-value=5.7e-18  Score=152.14  Aligned_cols=207  Identities=15%  Similarity=0.051  Sum_probs=137.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .++++++|||||||+||++++++|+++|++|++++|+........+.+.... ....+.++.+|++              
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~--------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL-EKPVLELEERDLS--------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE-CSCGGGCCHHHHT--------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc-cCCCeeEEeCccc--------------
Confidence            3567899999999999999999999999999999998652000000000000 0012445555555              


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                         .+|+|||+||.....                           ...+.....++ |+.++.++++++...    +.++
T Consensus        69 ---~~d~vi~~a~~~~~~---------------------------~~~~~~~~~~~-n~~~~~~ll~a~~~~----~v~~  113 (321)
T 3vps_A           69 ---DVRLVYHLASHKSVP---------------------------RSFKQPLDYLD-NVDSGRHLLALCTSV----GVPK  113 (321)
T ss_dssp             ---TEEEEEECCCCCCHH---------------------------HHTTSTTTTHH-HHHHHHHHHHHHHHH----TCCE
T ss_pred             ---cCCEEEECCccCChH---------------------------HHHhCHHHHHH-HHHHHHHHHHHHHHc----CCCe
Confidence               689999999976432                           11122234566 999999999988653    3469


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      +|++||........                               ...+.+..+......|+.+|.+.+.+++.++.+. 
T Consensus       114 ~v~~SS~~v~~~~~-------------------------------~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-  161 (321)
T 3vps_A          114 VVVGSTCEVYGQAD-------------------------------TLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRAS-  161 (321)
T ss_dssp             EEEEEEGGGGCSCS-------------------------------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHSS-
T ss_pred             EEEecCHHHhCCCC-------------------------------CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc-
Confidence            99999976543210                               0012223334456889999999999999999885 


Q ss_pred             Cc-EEEEeeCCeeecCCCCC--------------------------CCCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          243 KF-CVNCVCPGFVKTDINFH--------------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       243 ~i-~vn~v~PG~v~t~~~~~--------------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      ++ +++.+.||.+..+....                          ..+...++.++..+..+..+..   |.|.+.++
T Consensus       162 ~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~---g~~~i~~~  237 (321)
T 3vps_A          162 VAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP---SVVNFGSG  237 (321)
T ss_dssp             SSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC---SEEEESCS
T ss_pred             CCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC---CeEEecCC
Confidence            88 99999999998875321                          0134678888888887776543   35545443

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.72  E-value=3.5e-17  Score=146.39  Aligned_cols=173  Identities=16%  Similarity=0.085  Sum_probs=125.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            8 YAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++|||||+|+||++++++|+++| ++|++++|+.....  ...+..       +. +.+|+++.+.++.+++...  +++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~-------~~-~~~d~~~~~~~~~~~~~~~--~~~   68 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD-------LN-IADYMDKEDFLIQIMAGEE--FGD   68 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT-------SC-CSEEEEHHHHHHHHHTTCC--CSS
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc-------ce-eccccccHHHHHHHHhccc--cCC
Confidence            48999999999999999999999 99999999865421  111221       22 6789999888777664110  136


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+|||+||....                             ..+.+.+.+++|+.++.++++++.+.    +. ++|++
T Consensus        69 ~d~vi~~a~~~~~-----------------------------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-~~v~~  114 (310)
T 1eq2_A           69 VEAIFHEGACSST-----------------------------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYA  114 (310)
T ss_dssp             CCEEEECCSCCCT-----------------------------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEE
T ss_pred             CcEEEECcccccC-----------------------------cccCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEE
Confidence            9999999997532                             11234567899999999999998763    34 99999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      ||.........                               ..+.+..+......|+.+|.+.+.+++.++.++ ++++
T Consensus       115 SS~~v~g~~~~-------------------------------~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-g~~~  162 (310)
T 1eq2_A          115 SSAATYGGRTS-------------------------------DFIESREYEKPLNVYGYSKFLFDEYVRQILPEA-NSQI  162 (310)
T ss_dssp             EEGGGGTTCCS-------------------------------CBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC-SSCE
T ss_pred             eeHHHhCCCCC-------------------------------CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc-CCCE
Confidence            99765422100                               001111122335789999999999999998774 8999


Q ss_pred             EEeeCCeeecCC
Q 022357          247 NCVCPGFVKTDI  258 (298)
Q Consensus       247 n~v~PG~v~t~~  258 (298)
                      +.+.||.+.++.
T Consensus       163 ~~lrp~~v~G~~  174 (310)
T 1eq2_A          163 VGFRYFNVYGPR  174 (310)
T ss_dssp             EEEEECEEESSS
T ss_pred             EEEeCCcEECcC
Confidence            999999998875

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.72  E-value=3.8e-17  Score=145.63  Aligned_cols=157  Identities=13%  Similarity=0.009  Sum_probs=119.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +++||||+|+||++++++|+ +|++|++++|+..                    .+.+|+++.++++++++..     ++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~--------------------~~~~D~~d~~~~~~~~~~~-----~~   55 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK--------------------EFCGDFSNPKGVAETVRKL-----RP   55 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS--------------------SSCCCTTCHHHHHHHHHHH-----CC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc--------------------cccccCCCHHHHHHHHHhc-----CC
Confidence            69999999999999999999 8999999999751                    2468999999988887754     69


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+|||+||.....                           ...+.+.+.+++|+.++.++++++...    + .++|++|
T Consensus        56 d~vih~a~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~S  103 (299)
T 1n2s_A           56 DVIVNAAAHTAVD---------------------------KAESEPELAQLLNATSVEAIAKAANET----G-AWVVHYS  103 (299)
T ss_dssp             SEEEECCCCCCHH---------------------------HHTTCHHHHHHHHTHHHHHHHHHHTTT----T-CEEEEEE
T ss_pred             CEEEECcccCCHh---------------------------hhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CcEEEEe
Confidence            9999999975321                           123445677899999999999998652    2 4899999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVN  247 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn  247 (298)
                      |.....+...                               ....+..+......|+.+|.+.+.+++.++.     +++
T Consensus       104 S~~vy~~~~~-------------------------------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~  147 (299)
T 1n2s_A          104 TDYVFPGTGD-------------------------------IPWQETDATSPLNVYGKTKLAGEKALQDNCP-----KHL  147 (299)
T ss_dssp             EGGGSCCCTT-------------------------------CCBCTTSCCCCSSHHHHHHHHHHHHHHHHCS-----SEE
T ss_pred             cccEEeCCCC-------------------------------CCCCCCCCCCCccHHHHHHHHHHHHHHHhCC-----CeE
Confidence            9765432200                               0111222334467899999999999987753     788


Q ss_pred             EeeCCeeecCC
Q 022357          248 CVCPGFVKTDI  258 (298)
Q Consensus       248 ~v~PG~v~t~~  258 (298)
                      .+.||.+.++.
T Consensus       148 ilRp~~v~G~~  158 (299)
T 1n2s_A          148 IFRTSWVYAGK  158 (299)
T ss_dssp             EEEECSEECSS
T ss_pred             EEeeeeecCCC
Confidence            99999998864

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.70  E-value=6.9e-17  Score=144.30  Aligned_cols=173  Identities=14%  Similarity=0.108  Sum_probs=121.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ++++++|||||+|+||++++++|+++|+      +..              .....+..+.+|+++.+++.++++..   
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~--------------~~~~~~~~~~~D~~d~~~~~~~~~~~---   60 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPG--------------EDWVFVSSKDADLTDTAQTRALFEKV---   60 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT--------------CEEEECCTTTCCTTSHHHHHHHHHHS---
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc--------------ccccccCceecccCCHHHHHHHHhhc---
Confidence            4678999999999999999999999998      110              00011444578999999988887643   


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        ++|+|||+|+.....                          ....+...+.+++|+.++.++++++...    +.+++
T Consensus        61 --~~d~Vih~A~~~~~~--------------------------~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~  108 (319)
T 4b8w_A           61 --QPTHVIHLAAMVGGL--------------------------FRNIKYNLDFWRKNVHMNDNVLHSAFEV----GARKV  108 (319)
T ss_dssp             --CCSEEEECCCCCCCH--------------------------HHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCSEE
T ss_pred             --CCCEEEECceecccc--------------------------cccccCHHHHHHHHHHHHHHHHHHHHHc----CCCeE
Confidence              699999999975321                          0133445567999999999999988552    34699


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      |++||.........          .+..                ..........+....|+.+|.+.+.+++.++.+. +
T Consensus       109 v~~SS~~vyg~~~~----------~~~~----------------E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~-~  161 (319)
T 4b8w_A          109 VSCLSTCIFPDKTT----------YPID----------------ETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY-G  161 (319)
T ss_dssp             EEECCGGGSCSSCC----------SSBC----------------GGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH-C
T ss_pred             EEEcchhhcCCCCC----------CCcc----------------ccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh-C
Confidence            99999765422100          0000                0000000122333469999999999999998875 8


Q ss_pred             cEEEEeeCCeeecCC
Q 022357          244 FCVNCVCPGFVKTDI  258 (298)
Q Consensus       244 i~vn~v~PG~v~t~~  258 (298)
                      ++++.+.||.+..+.
T Consensus       162 ~~~~ilRp~~v~Gp~  176 (319)
T 4b8w_A          162 CTFTAVIPTNVFGPH  176 (319)
T ss_dssp             CEEEEEEECEEECTT
T ss_pred             CCEEEEeeccccCCC
Confidence            999999999998764

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.68  E-value=4.4e-16  Score=149.46  Aligned_cols=181  Identities=14%  Similarity=0.046  Sum_probs=125.7

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhh---HHHHHHHHhcC------CCCcceeEEEeccCcHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG---LEAVEKLKASG------VDPELLLFHQLDISDLASVSSL   76 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~---~~~~~~~~~~~------~~~~~~~~~~~Dls~~~~v~~~   76 (298)
                      .++||||||||+||++++++|.++|++|++++|+....   ..+.+.+....      ....++.++.+|+++.+++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            47999999999999999999999999999999987632   22222222210      00123899999999987766  


Q ss_pred             HHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhc
Q 022357           77 ADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE  156 (298)
Q Consensus        77 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~  156 (298)
                            ....+|+|||||+....                              ...+.+.+.+|+.++.++++++..   
T Consensus       228 ------~~~~~D~Vih~Aa~~~~------------------------------~~~~~~~~~~Nv~gt~~ll~~a~~---  268 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTDH------------------------------FGDDDEFEKVNVQGTVDVIRLAQQ---  268 (508)
T ss_dssp             ------CSSCCSEEEECCCC--------------------------------------CCHHHHHHHHHHHHHHHHT---
T ss_pred             ------CccCCCEEEECCceecC------------------------------CCCHHHHhhhHHHHHHHHHHHHHh---
Confidence                  34589999999997632                              123356788999999999999876   


Q ss_pred             cCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCC---CCCCchhhhHHHHHHHH
Q 022357          157 LSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGW---CPHSSAYKVSKAVINAY  233 (298)
Q Consensus       157 ~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Y~~sK~al~~l  233 (298)
                        +..++|++||...  +.....                         ......+.+..+   ......|+.||.+.+.+
T Consensus       269 --~~~~~v~iSS~~v--G~~~~~-------------------------~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~  319 (508)
T 4f6l_B          269 --HHARLIYVSTISV--GTYFDI-------------------------DTEDVTFSEADVYKGQLLTSPYTRSKFYSELK  319 (508)
T ss_dssp             --TTCEEEEEEESCT--TSEECT-------------------------TCSCCEECTTCSCSSBCCCSHHHHHHHHHHHH
T ss_pred             --CCCcEEEeCChhh--ccCCcc-------------------------CCcCcccccccccccccCCCcHHHHHHHHHHH
Confidence              3479999999776  210000                         000000111111   12467899999999999


Q ss_pred             HHHHHHhCCCcEEEEeeCCeeecCC
Q 022357          234 TRILAKRYPKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       234 ~~~la~e~~~i~vn~v~PG~v~t~~  258 (298)
                      ++.++.  .+++++.+.||.|..+.
T Consensus       320 ~~~~~~--~gi~~~ilRp~~v~G~~  342 (508)
T 4f6l_B          320 VLEAVN--NGLDGRIVRVGNLTSPY  342 (508)
T ss_dssp             HHHHHH--TTCEEEEEEECCEESCS
T ss_pred             HHHHHH--cCCCEEEEecceeccCC
Confidence            998754  59999999999998864

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.67  E-value=1.3e-16  Score=141.52  Aligned_cols=194  Identities=12%  Similarity=0.039  Sum_probs=136.3

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++++|||| +|+||++++++|+++|++|++++|+...+          .   ..+.++.+|+++.++++++++      +
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~---~~~~~~~~Dl~d~~~~~~~~~------~   62 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------P---AGVQTLIADVTRPDTLASIVH------L   62 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------C---TTCCEEECCTTCGGGCTTGGG------G
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------c---cCCceEEccCCChHHHHHhhc------C
Confidence            46899999 59999999999999999999999987652          1   128889999999998877664      3


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|+|||+||...                                ......+++|+.++.++++++..    .+.+++|+
T Consensus        63 ~~d~vih~a~~~~--------------------------------~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~v~  106 (286)
T 3gpi_A           63 RPEILVYCVAASE--------------------------------YSDEHYRLSYVEGLRNTLSALEG----APLQHVFF  106 (286)
T ss_dssp             CCSEEEECHHHHH--------------------------------HC-----CCSHHHHHHHHHHTTT----SCCCEEEE
T ss_pred             CCCEEEEeCCCCC--------------------------------CCHHHHHHHHHHHHHHHHHHHhh----CCCCEEEE
Confidence            6999999998531                                22346688999999999998863    34579999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcE
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC  245 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~  245 (298)
                      +||........                               ...+.+..+......|+.+|.+.+.+ +..      ++
T Consensus       107 ~SS~~vyg~~~-------------------------------~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~------~~  148 (286)
T 3gpi_A          107 VSSTGVYGQEV-------------------------------EEWLDEDTPPIAKDFSGKRMLEAEAL-LAA------YS  148 (286)
T ss_dssp             EEEGGGCCCCC-------------------------------SSEECTTSCCCCCSHHHHHHHHHHHH-GGG------SS
T ss_pred             EcccEEEcCCC-------------------------------CCCCCCCCCCCCCChhhHHHHHHHHH-Hhc------CC
Confidence            99976543210                               00112233334568899999999988 543      78


Q ss_pred             EEEeeCCeeecCCCCC-----------------CCCCChhhhhhhhhhhhccCC-CCCcceEeccC
Q 022357          246 VNCVCPGFVKTDINFH-----------------AGILSVEEGAESPVKLALLPD-GGPTGRFFLRK  293 (298)
Q Consensus       246 vn~v~PG~v~t~~~~~-----------------~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~l~~  293 (298)
                      ++.+.||.+..+....                 ..+...++.++..+..+..+. ....+.+.+.+
T Consensus       149 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~  214 (286)
T 3gpi_A          149 STILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTD  214 (286)
T ss_dssp             EEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             eEEEecccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeC
Confidence            9999999998764320                 123467788888777776542 23344554443

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.66  E-value=1.2e-15  Score=135.14  Aligned_cols=180  Identities=9%  Similarity=-0.005  Sum_probs=131.4

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            7 KYAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~--G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      |+++||||+|+||++++++|+++  |++|++++|+..+.....    ..     .+.++.+|+++.++++++++      
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~~-----~~~~~~~D~~d~~~l~~~~~------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----DQ-----GVEVRHGDYNQPESLQKAFA------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----HT-----TCEEEECCTTCHHHHHHHTT------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----hc-----CCeEEEeccCCHHHHHHHHh------
Confidence            46999999999999999999999  999999999877654332    11     17889999999998887764      


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       .+|+|||+|+.. .                             . +      ++|+.++.++++++..    .+.+++|
T Consensus        66 -~~d~vi~~a~~~-~-----------------------------~-~------~~n~~~~~~l~~a~~~----~~~~~~v  103 (287)
T 2jl1_A           66 -GVSKLLFISGPH-Y-----------------------------D-N------TLLIVQHANVVKAARD----AGVKHIA  103 (287)
T ss_dssp             -TCSEEEECCCCC-S-----------------------------C-H------HHHHHHHHHHHHHHHH----TTCSEEE
T ss_pred             -cCCEEEEcCCCC-c-----------------------------C-c------hHHHHHHHHHHHHHHH----cCCCEEE
Confidence             689999999852 0                             0 0      4678888888888754    3457999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCc
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF  244 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i  244 (298)
                      ++||.....                                             ....|+.+|.+.+.+++.     .++
T Consensus       104 ~~Ss~~~~~---------------------------------------------~~~~y~~~K~~~E~~~~~-----~~~  133 (287)
T 2jl1_A          104 YTGYAFAEE---------------------------------------------SIIPLAHVHLATEYAIRT-----TNI  133 (287)
T ss_dssp             EEEETTGGG---------------------------------------------CCSTHHHHHHHHHHHHHH-----TTC
T ss_pred             EECCCCCCC---------------------------------------------CCCchHHHHHHHHHHHHH-----cCC
Confidence            999965421                                             123799999999998863     588


Q ss_pred             EEEEeeCCeeecCC-CC------------------CCCCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          245 CVNCVCPGFVKTDI-NF------------------HAGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       245 ~vn~v~PG~v~t~~-~~------------------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      +++.+.||++.++. ..                  ...+..+++.++..+..+..+. ..+..+.+.++
T Consensus       134 ~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~~  201 (287)
T 2jl1_A          134 PYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG-HENKTYNLVSN  201 (287)
T ss_dssp             CEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS-CTTEEEEECCS
T ss_pred             CeEEEECCEeccccchhhHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC-CCCcEEEecCC
Confidence            99999999886653 10                  0134578888888877776543 22334444443

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.65  E-value=1.4e-15  Score=135.74  Aligned_cols=155  Identities=17%  Similarity=0.049  Sum_probs=109.4

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +++++||||||+||++++++|+++| ++|++++|++.+...  ..+...+     +.++.+|++|.++++++++      
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~~~-----~~~~~~D~~d~~~l~~~~~------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRLQG-----AEVVQGDQDDQVIMELALN------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHHTT-----CEEEECCTTCHHHHHHHHT------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHHCC-----CEEEEecCCCHHHHHHHHh------
Confidence            5799999999999999999999999 999999999765421  2233221     7888999999999888765      


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       .+|+||||+|.....                                   ....|+.++..+    ++.+++.+.++||
T Consensus        72 -~~d~vi~~a~~~~~~-----------------------------------~~~~~~~~~~~~----~~aa~~~gv~~iv  111 (299)
T 2wm3_A           72 -GAYATFIVTNYWESC-----------------------------------SQEQEVKQGKLL----ADLARRLGLHYVV  111 (299)
T ss_dssp             -TCSEEEECCCHHHHT-----------------------------------CHHHHHHHHHHH----HHHHHHHTCSEEE
T ss_pred             -cCCEEEEeCCCCccc-----------------------------------cchHHHHHHHHH----HHHHHHcCCCEEE
Confidence             689999999843110                                   122344444444    4444444557999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCc
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF  244 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i  244 (298)
                      ++||.. ..+.                                    . ..  .....|..+|.+++.+++.     .++
T Consensus       112 ~~S~~~-~~~~------------------------------------~-~~--~~~~~y~~sK~~~e~~~~~-----~gi  146 (299)
T 2wm3_A          112 YSGLEN-IKKL------------------------------------T-AG--RLAAAHFDGKGEVEEYFRD-----IGV  146 (299)
T ss_dssp             ECCCCC-HHHH------------------------------------T-TT--SCCCHHHHHHHHHHHHHHH-----HTC
T ss_pred             EEcCcc-cccc------------------------------------C-CC--cccCchhhHHHHHHHHHHH-----CCC
Confidence            965533 2110                                    0 00  1236799999999998874     388


Q ss_pred             EEEEeeCCeeecCC
Q 022357          245 CVNCVCPGFVKTDI  258 (298)
Q Consensus       245 ~vn~v~PG~v~t~~  258 (298)
                      +++.|.||.+.+++
T Consensus       147 ~~~ilrp~~~~~~~  160 (299)
T 2wm3_A          147 PMTSVRLPCYFENL  160 (299)
T ss_dssp             CEEEEECCEEGGGG
T ss_pred             CEEEEeecHHhhhc
Confidence            99999999988764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.65  E-value=1.4e-15  Score=134.47  Aligned_cols=177  Identities=10%  Similarity=0.047  Sum_probs=125.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            8 YAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~--G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +++||||+|+||++++++|+++  |++|++++|++.+.....    ..     .+.++.+|+++.++++++++       
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~~-----~~~~~~~D~~d~~~~~~~~~-------   64 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----AQ-----GITVRQADYGDEAALTSALQ-------   64 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----HT-----TCEEEECCTTCHHHHHHHTT-------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----cC-----CCeEEEcCCCCHHHHHHHHh-------
Confidence            4899999999999999999998  999999999877654322    11     17788999999988877764       


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      .+|+|||+||...                                       ..|+.++.++++++..    .+.+++|+
T Consensus        65 ~~d~vi~~a~~~~---------------------------------------~~~~~~~~~l~~a~~~----~~~~~~v~  101 (286)
T 2zcu_A           65 GVEKLLLISSSEV---------------------------------------GQRAPQHRNVINAAKA----AGVKFIAY  101 (286)
T ss_dssp             TCSEEEECC-----------------------------------------------CHHHHHHHHHHH----HTCCEEEE
T ss_pred             CCCEEEEeCCCCc---------------------------------------hHHHHHHHHHHHHHHH----cCCCEEEE
Confidence            6899999998420                                       1256667666666644    34579999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcE
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC  245 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~  245 (298)
                      +||....                                             .....|+.+|.+.+.+++.     .+++
T Consensus       102 ~Ss~~~~---------------------------------------------~~~~~y~~sK~~~e~~~~~-----~~~~  131 (286)
T 2zcu_A          102 TSLLHAD---------------------------------------------TSPLGLADEHIETEKMLAD-----SGIV  131 (286)
T ss_dssp             EEETTTT---------------------------------------------TCCSTTHHHHHHHHHHHHH-----HCSE
T ss_pred             ECCCCCC---------------------------------------------CCcchhHHHHHHHHHHHHH-----cCCC
Confidence            9996543                                             1124799999999998864     4899


Q ss_pred             EEEeeCCeeecCCC------------------CCCCCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          246 VNCVCPGFVKTDIN------------------FHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       246 vn~v~PG~v~t~~~------------------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      ++.+.||++.++..                  ....+..+++.++..+..+..+. ..+..+.+.++
T Consensus       132 ~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~~  197 (286)
T 2zcu_A          132 YTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG-HEGKVYELAGD  197 (286)
T ss_dssp             EEEEEECCBHHHHHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS-CTTCEEEECCS
T ss_pred             eEEEeChHHhhhhHHHhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC-CCCceEEEeCC
Confidence            99999998866421                  01235688889988888776543 23334444443

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.62  E-value=7e-15  Score=134.84  Aligned_cols=150  Identities=17%  Similarity=0.117  Sum_probs=108.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEec-cCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD-ISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-ls~~~~v~~~~~~~~~~   83 (298)
                      .+++++||||||+||++++++|+++|++|++++|+.++..  ...+....    .+.++.+| +++.+++.++++     
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~~----~v~~v~~D~l~d~~~l~~~~~-----   72 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAIP----NVTLFQGPLLNNVPLMDTLFE-----   72 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHTST----TEEEEESCCTTCHHHHHHHHT-----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhhcC----CcEEEECCccCCHHHHHHHHh-----
Confidence            4678999999999999999999999999999999876542  12333211    27888999 999999887765     


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-CCc
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-SPR  162 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~  162 (298)
                        .+|+||||++...                                      ...|..+ .++++++    ++.+ .++
T Consensus        73 --~~d~Vi~~a~~~~--------------------------------------~~~~~~~-~~l~~aa----~~~g~v~~  107 (352)
T 1xgk_A           73 --GAHLAFINTTSQA--------------------------------------GDEIAIG-KDLADAA----KRAGTIQH  107 (352)
T ss_dssp             --TCSEEEECCCSTT--------------------------------------SCHHHHH-HHHHHHH----HHHSCCSE
T ss_pred             --cCCEEEEcCCCCC--------------------------------------cHHHHHH-HHHHHHH----HHcCCccE
Confidence              5899999987421                                      0123333 4444444    4344 579


Q ss_pred             EEEEccCcc-cccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          163 LVNLSSYVS-ALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       163 iv~vsS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +|++||... ..+                                         . .....|..||++.+.+++.+    
T Consensus       108 ~V~~SS~~~~~~~-----------------------------------------~-~~~~~y~~sK~~~E~~~~~~----  141 (352)
T 1xgk_A          108 YIYSSMPDHSLYG-----------------------------------------P-WPAVPMWAPKFTVENYVRQL----  141 (352)
T ss_dssp             EEEEECCCGGGTS-----------------------------------------S-CCCCTTTHHHHHHHHHHHTS----
T ss_pred             EEEeCCccccccC-----------------------------------------C-CCCccHHHHHHHHHHHHHHc----
Confidence            999999752 111                                         0 22367999999999988753    


Q ss_pred             CCcEEEEeeCCeeecC
Q 022357          242 PKFCVNCVCPGFVKTD  257 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~  257 (298)
                       +++++.|.||++-+.
T Consensus       142 -gi~~~ivrpg~~g~~  156 (352)
T 1xgk_A          142 -GLPSTFVYAGIYNNN  156 (352)
T ss_dssp             -SSCEEEEEECEEGGG
T ss_pred             -CCCEEEEecceecCC
Confidence             889999999987543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.61  E-value=1.7e-14  Score=127.60  Aligned_cols=186  Identities=13%  Similarity=-0.025  Sum_probs=127.0

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .++++|||| |+||++++++|+++|++|++++|+..+.....    ..     .+.++.+|+++.+            ..
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~-----~~~~~~~D~~d~~------------~~   62 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----AS-----GAEPLLWPGEEPS------------LD   62 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----HT-----TEEEEESSSSCCC------------CT
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----hC-----CCeEEEecccccc------------cC
Confidence            368999998 99999999999999999999999987654332    11     2889999999833            35


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc--CCCCcE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL--SDSPRL  163 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~~~g~i  163 (298)
                      .+|+|||+|+.....   +                        .                 ..+.++..+++  .+.+++
T Consensus        63 ~~d~vi~~a~~~~~~---~------------------------~-----------------~~~~l~~a~~~~~~~~~~~   98 (286)
T 3ius_A           63 GVTHLLISTAPDSGG---D------------------------P-----------------VLAALGDQIAARAAQFRWV   98 (286)
T ss_dssp             TCCEEEECCCCBTTB---C------------------------H-----------------HHHHHHHHHHHTGGGCSEE
T ss_pred             CCCEEEECCCccccc---c------------------------H-----------------HHHHHHHHHHhhcCCceEE
Confidence            799999999965321   0                        0                 01223333333  344799


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      |++||........                               ...+.+..++.....|+.+|.+.+.+++.+    .+
T Consensus        99 v~~Ss~~vyg~~~-------------------------------~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~----~~  143 (286)
T 3ius_A           99 GYLSTTAVYGDHD-------------------------------GAWVDETTPLTPTAARGRWRVMAEQQWQAV----PN  143 (286)
T ss_dssp             EEEEEGGGGCCCT-------------------------------TCEECTTSCCCCCSHHHHHHHHHHHHHHHS----TT
T ss_pred             EEeecceecCCCC-------------------------------CCCcCCCCCCCCCCHHHHHHHHHHHHHHhh----cC
Confidence            9999975442210                               001222334445678999999999998877    68


Q ss_pred             cEEEEeeCCeeecCCCCC------------------CCCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          244 FCVNCVCPGFVKTDINFH------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~~------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      ++++.+.||.+..+....                  ..+...++.++..+..+..+.  .++.|.+.++
T Consensus       144 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~~i~~~  210 (286)
T 3ius_A          144 LPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPD--PGAVYNVCDD  210 (286)
T ss_dssp             CCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCC--TTCEEEECCS
T ss_pred             CCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCC--CCCEEEEeCC
Confidence            999999999998764211                  123456888888888777654  3445555543

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.56  E-value=1.8e-14  Score=132.47  Aligned_cols=134  Identities=19%  Similarity=0.097  Sum_probs=108.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++|||||+|+||++++++|+++|+ +|+..+|+                            ++.++++++++       .
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------------~d~~~l~~~~~-------~   46 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------------TKEEELESALL-------K   46 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------------CCHHHHHHHHH-------H
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------------CCHHHHHHHhc-------c
Confidence            699999999999999999999998 77776664                            56777777765       4


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC-CcEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS-PRLVN  165 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-g~iv~  165 (298)
                      +|+|||+||.....                               ...+.+++|+.++.++++++..    .+. .++|+
T Consensus        47 ~d~Vih~a~~~~~~-------------------------------~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~   91 (369)
T 3st7_A           47 ADFIVHLAGVNRPE-------------------------------HDKEFSLGNVSYLDHVLDILTR----NTKKPAILL   91 (369)
T ss_dssp             CSEEEECCCSBCTT-------------------------------CSTTCSSSCCBHHHHHHHHHTT----CSSCCEEEE
T ss_pred             CCEEEECCcCCCCC-------------------------------CHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEE
Confidence            89999999976421                               2234688999999999998854    233 38999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcE
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC  245 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~  245 (298)
                      +||.....                                              ...|+.+|.+.+.+++.++.+. +++
T Consensus        92 ~Ss~~~~~----------------------------------------------~~~Y~~sK~~~E~~~~~~~~~~-g~~  124 (369)
T 3st7_A           92 SSSIQATQ----------------------------------------------DNPYGESKLQGEQLLREYAEEY-GNT  124 (369)
T ss_dssp             EEEGGGGS----------------------------------------------CSHHHHHHHHHHHHHHHHHHHH-CCC
T ss_pred             eCchhhcC----------------------------------------------CCCchHHHHHHHHHHHHHHHHh-CCC
Confidence            99966431                                              4689999999999999998885 789


Q ss_pred             EEEeeCCeeecCC
Q 022357          246 VNCVCPGFVKTDI  258 (298)
Q Consensus       246 vn~v~PG~v~t~~  258 (298)
                      +..+.|+.+..+.
T Consensus       125 ~~i~R~~~v~G~~  137 (369)
T 3st7_A          125 VYIYRWPNLFGKW  137 (369)
T ss_dssp             EEEEEECEEECTT
T ss_pred             EEEEECCceeCCC
Confidence            9999999998764

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.55  E-value=5.5e-14  Score=128.11  Aligned_cols=187  Identities=11%  Similarity=0.054  Sum_probs=128.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH---HHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE---AVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .++++||||||+||++++++|+++|++|++++|+......   ....+...+     +.++++|++|.+++.++++..  
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~-----v~~~~~Dl~d~~~l~~~~~~~--   82 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKG-----AIIVYGLINEQEAMEKILKEH--   82 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTT-----CEEEECCTTCHHHHHHHHHHT--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCC-----cEEEEeecCCHHHHHHHHhhC--
Confidence            4689999999999999999999999999999998732222   223333322     889999999999988887643  


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                         .+|+|||+||..                                          |+.++.++++++...   ....+
T Consensus        83 ---~~d~Vi~~a~~~------------------------------------------n~~~~~~l~~aa~~~---g~v~~  114 (346)
T 3i6i_A           83 ---EIDIVVSTVGGE------------------------------------------SILDQIALVKAMKAV---GTIKR  114 (346)
T ss_dssp             ---TCCEEEECCCGG------------------------------------------GGGGHHHHHHHHHHH---CCCSE
T ss_pred             ---CCCEEEECCchh------------------------------------------hHHHHHHHHHHHHHc---CCceE
Confidence               789999999842                                          666777777777552   11346


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      +|+  |..+...                                     .+..+......|+.+|.+++.+.+.     .
T Consensus       115 ~v~--S~~g~~~-------------------------------------~e~~~~~p~~~y~~sK~~~e~~l~~-----~  150 (346)
T 3i6i_A          115 FLP--SEFGHDV-------------------------------------NRADPVEPGLNMYREKRRVRQLVEE-----S  150 (346)
T ss_dssp             EEC--SCCSSCT-------------------------------------TTCCCCTTHHHHHHHHHHHHHHHHH-----T
T ss_pred             Eee--cccCCCC-------------------------------------CccCcCCCcchHHHHHHHHHHHHHH-----c
Confidence            664  3333210                                     0112223457899999999887765     4


Q ss_pred             CcEEEEeeCCeeecCCCCC-----------------------CCCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          243 KFCVNCVCPGFVKTDINFH-----------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~-----------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      ++.++.|.||.+.......                       ..+...++.++..+..+..++ ..+..+++.
T Consensus       151 g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~i~  222 (346)
T 3i6i_A          151 GIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVR-TLNKSVHFR  222 (346)
T ss_dssp             TCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGG-GTTEEEECC
T ss_pred             CCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCcc-ccCeEEEEe
Confidence            7889999999887643211                       013477888888888777653 223344443

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.54  E-value=5.9e-14  Score=125.34  Aligned_cols=79  Identities=18%  Similarity=0.265  Sum_probs=63.7

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-------hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-------KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      +++++||||||+||++++++|+++|++|++++|+.       ++... ...+...+     +.++++|+++.+++.++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~~~-----v~~v~~D~~d~~~l~~~~~   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQSLG-----VILLEGDINDHETLVKAIK   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHHTT-----CEEEECCTTCHHHHHHHHT
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHhCC-----CEEEEeCCCCHHHHHHHHh
Confidence            46799999999999999999999999999999986       33222 23333322     7889999999998887775


Q ss_pred             HHHHhcCCccEEEEccccC
Q 022357           79 FIKTQFGKLDILANNAGIA   97 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~   97 (298)
                             .+|+||||||..
T Consensus        76 -------~~d~vi~~a~~~   87 (307)
T 2gas_A           76 -------QVDIVICAAGRL   87 (307)
T ss_dssp             -------TCSEEEECSSSS
T ss_pred             -------CCCEEEECCccc
Confidence                   689999999863

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.53  E-value=4.6e-14  Score=128.94  Aligned_cols=172  Identities=13%  Similarity=0.026  Sum_probs=116.8

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCC-----CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKG-----ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G-----~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      ++++|||||+|+||++++++|+++|     ++|++++|+.....        .  ....+.++.+|+++.++++++++. 
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--------~--~~~~~~~~~~Dl~d~~~~~~~~~~-   69 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--------H--EDNPINYVQCDISDPDDSQAKLSP-   69 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--------C--CSSCCEEEECCTTSHHHHHHHHTT-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--------c--ccCceEEEEeecCCHHHHHHHHhc-
Confidence            4689999999999999999999999     99999999876432        0  112378899999999988777652 


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                         +.++|+|||+||...                                +...+.+++|+.++.++++++.+...  +.
T Consensus        70 ---~~~~d~vih~a~~~~--------------------------------~~~~~~~~~n~~~~~~l~~a~~~~~~--~~  112 (364)
T 2v6g_A           70 ---LTDVTHVFYVTWANR--------------------------------STEQENCEANSKMFRNVLDAVIPNCP--NL  112 (364)
T ss_dssp             ---CTTCCEEEECCCCCC--------------------------------SSHHHHHHHHHHHHHHHHHHHTTTCT--TC
T ss_pred             ---CCCCCEEEECCCCCc--------------------------------chHHHHHHHhHHHHHHHHHHHHHhcc--cc
Confidence               224999999999652                                12346789999999999999987521  23


Q ss_pred             CcEE-------EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCC-CCCchhhhHHHHHHH
Q 022357          161 PRLV-------NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWC-PHSSAYKVSKAVINA  232 (298)
Q Consensus       161 g~iv-------~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~al~~  232 (298)
                      .++|       ++||........+                             ....+.+..+. +....|    .+.+.
T Consensus       113 ~~~v~~~g~~i~~Ss~~vyg~~~~-----------------------------~~~~~~E~~~~~~~~~~y----~~~E~  159 (364)
T 2v6g_A          113 KHISLQTGRKHYMGPFESYGKIES-----------------------------HDPPYTEDLPRLKYMNFY----YDLED  159 (364)
T ss_dssp             CEEEEECCTHHHHCCGGGTTTSCC-----------------------------CCSSBCTTSCCCSSCCHH----HHHHH
T ss_pred             ceEEeccCceEEEechhhcccccc-----------------------------CCCCCCccccCCccchhh----HHHHH
Confidence            4666       6777543321100                             00001111111 123456    34566


Q ss_pred             HHHHHHHhCCCcEEEEeeCCeeecCC
Q 022357          233 YTRILAKRYPKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       233 l~~~la~e~~~i~vn~v~PG~v~t~~  258 (298)
                      +++.++.++.++++..+.|+.|..+.
T Consensus       160 ~~~~~~~~~~~~~~~ilRp~~v~G~~  185 (364)
T 2v6g_A          160 IMLEEVEKKEGLTWSVHRPGNIFGFS  185 (364)
T ss_dssp             HHHHHHTTSTTCEEEEEEESSEECCC
T ss_pred             HHHHHhhcCCCceEEEECCCceeCCC
Confidence            66666655434999999999998864

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.52  E-value=2.3e-13  Score=121.84  Aligned_cols=189  Identities=13%  Similarity=0.109  Sum_probs=122.4

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh----hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR----GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .++++||||||+||++++++|+++|++|++++|+...    ....+..+...     .+.++++|+++.+++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~-----~~~~~~~D~~d~~~l~~~~~---   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQL-----GAKLIEASLDDHQRLVDALK---   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTT-----TCEEECCCSSCHHHHHHHHT---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhC-----CeEEEeCCCCCHHHHHHHHh---
Confidence            4679999999999999999999999999999998532    11122223221     17889999999998887765   


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-C
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-S  160 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~  160 (298)
                          .+|+|||++|....                                      ..|+.++..+++++..    .+ .
T Consensus        76 ----~~d~vi~~a~~~~~--------------------------------------~~~~~~~~~l~~aa~~----~g~v  109 (313)
T 1qyd_A           76 ----QVDVVISALAGGVL--------------------------------------SHHILEQLKLVEAIKE----AGNI  109 (313)
T ss_dssp             ----TCSEEEECCCCSSS--------------------------------------STTTTTHHHHHHHHHH----SCCC
T ss_pred             ----CCCEEEECCccccc--------------------------------------hhhHHHHHHHHHHHHh----cCCC
Confidence                68999999996531                                      1256666666666643    33 4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      +++|+  |..+....                                  .. .....+....| .+|.+++.+.+.    
T Consensus       110 ~~~v~--S~~g~~~~----------------------------------~~-~~~~~p~~~~y-~sK~~~e~~~~~----  147 (313)
T 1qyd_A          110 KRFLP--SEFGMDPD----------------------------------IM-EHALQPGSITF-IDKRKVRRAIEA----  147 (313)
T ss_dssp             SEEEC--SCCSSCTT----------------------------------SC-CCCCSSTTHHH-HHHHHHHHHHHH----
T ss_pred             ceEEe--cCCcCCcc----------------------------------cc-ccCCCCCcchH-HHHHHHHHHHHh----
Confidence            67774  43332110                                  00 01111335678 999999987753    


Q ss_pred             CCCcEEEEeeCCeeecCCC----C-------C-------------CCCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          241 YPKFCVNCVCPGFVKTDIN----F-------H-------------AGILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       241 ~~~i~vn~v~PG~v~t~~~----~-------~-------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                       .+++++.+.||++.+++.    .       .             ..+..+++.++..+..+..+.. .+..+++.
T Consensus       148 -~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~-~~~~~~~~  221 (313)
T 1qyd_A          148 -ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT-LNKTMYIR  221 (313)
T ss_dssp             -TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGG-SSSEEECC
T ss_pred             -cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCccc-CCceEEEe
Confidence             377888888988754211    0       0             0134677888877777765432 23344443

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.51  E-value=1.5e-13  Score=121.89  Aligned_cols=169  Identities=12%  Similarity=0.080  Sum_probs=114.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            8 YAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++|||||||+||++++++|+++ |++|++++|++++....    ..     ..+.++++|++|.++++++++       .
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----~~-----~~v~~~~~D~~d~~~l~~~~~-------~   65 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----WR-----GKVSVRQLDYFNQESMVEAFK-------G   65 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----GB-----TTBEEEECCTTCHHHHHHHTT-------T
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----hh-----CCCEEEEcCCCCHHHHHHHHh-------C
Confidence            5999999999999999999998 99999999998754322    11     128899999999998887765       7


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+||||||.....                                     ..|+.++..++    +.+++.+.++||++
T Consensus        66 ~d~vi~~a~~~~~~-------------------------------------~~~~~~~~~l~----~aa~~~gv~~iv~~  104 (289)
T 3e48_A           66 MDTVVFIPSIIHPS-------------------------------------FKRIPEVENLV----YAAKQSGVAHIIFI  104 (289)
T ss_dssp             CSEEEECCCCCCSH-------------------------------------HHHHHHHHHHH----HHHHHTTCCEEEEE
T ss_pred             CCEEEEeCCCCccc-------------------------------------hhhHHHHHHHH----HHHHHcCCCEEEEE
Confidence            89999999865321                                     12444444444    44444556799999


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      ||.....                                              ...|..++...  .++....+ .++++
T Consensus       105 Ss~~~~~----------------------------------------------~~~~~~~~~~~--~~e~~~~~-~g~~~  135 (289)
T 3e48_A          105 GYYADQH----------------------------------------------NNPFHMSPYFG--YASRLLST-SGIDY  135 (289)
T ss_dssp             EESCCST----------------------------------------------TCCSTTHHHHH--HHHHHHHH-HCCEE
T ss_pred             cccCCCC----------------------------------------------CCCCccchhHH--HHHHHHHH-cCCCE
Confidence            9954221                                              11222232211  12222222 48999


Q ss_pred             EEeeCCeeecCCCCC------------------CCCCChhhhhhhhhhhhccCC
Q 022357          247 NCVCPGFVKTDINFH------------------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       247 n~v~PG~v~t~~~~~------------------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      +.+.||.+.+++...                  ..+..+++.++..+..+..+.
T Consensus       136 ~ilrp~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~  189 (289)
T 3e48_A          136 TYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPD  189 (289)
T ss_dssp             EEEEECEESTTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGG
T ss_pred             EEEeccccccccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCC
Confidence            999999998864210                  114578888888888877654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.50  E-value=1.2e-13  Score=132.81  Aligned_cols=199  Identities=13%  Similarity=0.006  Sum_probs=133.2

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +++||||||+|+||++++++|+++|++|++++|+..+.                 ..+.+|+.+..         .+.+.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-----------------~~v~~d~~~~~---------~~~l~  200 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-----------------GKRFWDPLNPA---------SDLLD  200 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-----------------TCEECCTTSCC---------TTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-----------------cceeecccchh---------HHhcC
Confidence            57899999999999999999999999999999987642                 12567776431         12234


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      .+|+|||+||......                          .+.+.....+++|+.++.++++++..   +.+.+++|+
T Consensus       201 ~~D~Vih~A~~~~~~~--------------------------~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~~~r~V~  251 (516)
T 3oh8_A          201 GADVLVHLAGEPIFGR--------------------------FNDSHKEAIRESRVLPTKFLAELVAE---STQCTTMIS  251 (516)
T ss_dssp             TCSEEEECCCC-------------------------------CCGGGHHHHHHHTHHHHHHHHHHHHH---CSSCCEEEE
T ss_pred             CCCEEEECCCCccccc--------------------------cchhHHHHHHHHHHHHHHHHHHHHHh---cCCCCEEEE
Confidence            7999999999753210                          13344567789999999999997542   234579999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcE
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC  245 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~  245 (298)
                      +||........                              ....+.+..+ .....|+.+|...+.+.+.+ .. .+++
T Consensus       252 ~SS~~vyg~~~------------------------------~~~~~~E~~~-~~~~~y~~~~~~~E~~~~~~-~~-~gi~  298 (516)
T 3oh8_A          252 ASAVGFYGHDR------------------------------GDEILTEESE-SGDDFLAEVCRDWEHATAPA-SD-AGKR  298 (516)
T ss_dssp             EEEGGGGCSEE------------------------------EEEEECTTSC-CCSSHHHHHHHHHHHTTHHH-HH-TTCE
T ss_pred             eCcceEecCCC------------------------------CCCccCCCCC-CCcChHHHHHHHHHHHHHHH-Hh-CCCC
Confidence            99966443110                              0001122222 34677888898887765433 22 5899


Q ss_pred             EEEeeCCeeecCCCCC----------------------CCCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          246 VNCVCPGFVKTDINFH----------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       246 vn~v~PG~v~t~~~~~----------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      ++.+.||.|.++....                      ..+...++.++..+..+..+.  ..+.+.+.++
T Consensus       299 ~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~--~~g~~ni~~~  367 (516)
T 3oh8_A          299 VAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ--ISGPINAVAP  367 (516)
T ss_dssp             EEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTT--CCEEEEESCS
T ss_pred             EEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcc--cCCcEEEECC
Confidence            9999999999864200                      123467888888887776544  4455655554

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.48  E-value=1.8e-13  Score=123.14  Aligned_cols=79  Identities=16%  Similarity=0.201  Sum_probs=63.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-h----hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-K----RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~-~----~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .++++||||||+||++++++|+++|++|++++|+. .    .....+..+...+     +.++++|++|.+++.++++  
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~-----v~~v~~D~~d~~~l~~a~~--   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMG-----VTIIEGEMEEHEKMVSVLK--   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTT-----CEEEECCTTCHHHHHHHHT--
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCC-----cEEEEecCCCHHHHHHHHc--
Confidence            36799999999999999999999999999999986 2    1222223333222     7889999999999888775  


Q ss_pred             HHhcCCccEEEEcccc
Q 022357           81 KTQFGKLDILANNAGI   96 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~   96 (298)
                           .+|+||||++.
T Consensus        77 -----~~d~vi~~a~~   87 (321)
T 3c1o_A           77 -----QVDIVISALPF   87 (321)
T ss_dssp             -----TCSEEEECCCG
T ss_pred             -----CCCEEEECCCc
Confidence                 58999999985

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.47  E-value=1.7e-13  Score=123.26  Aligned_cols=79  Identities=14%  Similarity=0.239  Sum_probs=64.5

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .++++||||||+||++++++|+++|++|++++|+..........+...+     +.++++|++|.+++.++++       
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~-----v~~v~~Dl~d~~~l~~a~~-------   78 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLG-----AIIVKGELDEHEKLVELMK-------   78 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTT-----CEEEECCTTCHHHHHHHHT-------
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCC-----CEEEEecCCCHHHHHHHHc-------
Confidence            3589999999999999999999999999999998753333333343322     7889999999999888775       


Q ss_pred             CccEEEEcccc
Q 022357           86 KLDILANNAGI   96 (298)
Q Consensus        86 ~id~lv~nAg~   96 (298)
                      .+|+|||+++.
T Consensus        79 ~~d~vi~~a~~   89 (318)
T 2r6j_A           79 KVDVVISALAF   89 (318)
T ss_dssp             TCSEEEECCCG
T ss_pred             CCCEEEECCch
Confidence            58999999985

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.46  E-value=6.4e-13  Score=118.59  Aligned_cols=79  Identities=23%  Similarity=0.304  Sum_probs=62.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhh--HHH---HHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG--LEA---VEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~--~~~---~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .++++||||||+||++++++|+++|++|++++|+....  .+.   ...+...+     +.++++|+++.+++.++++  
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~-----v~~v~~D~~d~~~l~~~~~--   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASG-----ANIVHGSIDDHASLVEAVK--   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTT-----CEEECCCTTCHHHHHHHHH--
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCC-----CEEEEeccCCHHHHHHHHc--
Confidence            36799999999999999999999999999999985422  222   22332221     7889999999999888776  


Q ss_pred             HHhcCCccEEEEcccc
Q 022357           81 KTQFGKLDILANNAGI   96 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~   96 (298)
                           .+|+|||+++.
T Consensus        77 -----~~d~vi~~a~~   87 (308)
T 1qyc_A           77 -----NVDVVISTVGS   87 (308)
T ss_dssp             -----TCSEEEECCCG
T ss_pred             -----CCCEEEECCcc
Confidence                 58999999985

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.35  E-value=8.4e-13  Score=117.64  Aligned_cols=109  Identities=17%  Similarity=0.103  Sum_probs=84.5

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|+++||||+||||++++..|+++|++|++++|+.+++++..+++.... .   +.++.+|+++.++++++++     
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~-~---~~~~~~D~~~~~~~~~~~~-----  187 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-K---VNVTAAETADDASRAEAVK-----  187 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-T---CCCEEEECCSHHHHHHHTT-----
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC-C---cEEEEecCCCHHHHHHHHH-----
Confidence            578999999999999999999999999999999999888888877776431 1   5678899999988777664     


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhH-HHHHhhhhhhceeHH
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTY-ELAVECLKTNYYGTK  145 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~N~~~~~  145 (298)
                        .+|+||||||........                      .+.+. +.+...+++|+.+++
T Consensus       188 --~~DvlVn~ag~g~~~~~~----------------------~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 --GAHFVFTAGAIGLELLPQ----------------------AAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             --TCSEEEECCCTTCCSBCH----------------------HHHTTCTTCCEEEECCCSSSC
T ss_pred             --hCCEEEECCCccccCCCh----------------------hHcCchHHHHHHHHhhhhhhH
Confidence              589999999864211100                      01122 556678999999887

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.27  E-value=1.4e-10  Score=103.14  Aligned_cols=198  Identities=15%  Similarity=0.025  Sum_probs=119.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +||||||||.||++++++|+++|++|+++.|++...                  -+..|     .+      ..+....+
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~------------------~~~~~-----~~------~~~~l~~~   52 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG------------------RITWD-----EL------AASGLPSC   52 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT------------------EEEHH-----HH------HHHCCCSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC------------------eeecc-----hh------hHhhccCC
Confidence            599999999999999999999999999999975420                  11222     11      11223579


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |.+||.||.....+.                 ..|      +.....+.++.|+.++-.+++++...-  .+..++|+.|
T Consensus        53 d~vihla~~~i~~~~-----------------~~~------~~~~~~~~~~~~v~~t~~l~~~~~~~~--~~~~~~i~~S  107 (298)
T 4b4o_A           53 DAAVNLAGENILNPL-----------------RRW------NETFQKEVLGSRLETTQLLAKAITKAP--QPPKAWVLVT  107 (298)
T ss_dssp             SEEEECCCCCSSCTT-----------------SCC------CHHHHHHHHHHHHHHHHHHHHHHHHCS--SCCSEEEEEE
T ss_pred             CEEEEeccCcccchh-----------------hhh------hhhhhhhhhhHHHHHHHHHHHHHHHhC--CCceEEEEEe
Confidence            999999985422110                 011      334445678889988888877765421  2223567777


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEEE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVN  247 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~vn  247 (298)
                      |........                               .....+..+......|+..+...+...   .....++++.
T Consensus       108 s~~vyg~~~-------------------------------~~~~~E~~p~~~~~~~~~~~~~~e~~~---~~~~~~~~~~  153 (298)
T 4b4o_A          108 GVAYYQPSL-------------------------------TAEYDEDSPGGDFDFFSNLVTKWEAAA---RLPGDSTRQV  153 (298)
T ss_dssp             EGGGSCCCS-------------------------------SCCBCTTCCCSCSSHHHHHHHHHHHHH---CCSSSSSEEE
T ss_pred             eeeeecCCC-------------------------------CCcccccCCccccchhHHHHHHHHHHH---HhhccCCcee
Confidence            755443220                               011222233333455655555444311   1112588999


Q ss_pred             EeeCCeeecCCCC----------------------CCCCCChhhhhhhhhhhhccCCCCCcceEeccCcc
Q 022357          248 CVCPGFVKTDINF----------------------HAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEE  295 (298)
Q Consensus       248 ~v~PG~v~t~~~~----------------------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~  295 (298)
                      .+.||.|..+...                      ..++...++.++..+..+..++  ..+.|.+.+++
T Consensus       154 ~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~--~~g~yn~~~~~  221 (298)
T 4b4o_A          154 VVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANH--VHGVLNGVAPS  221 (298)
T ss_dssp             EEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTT--CCEEEEESCSC
T ss_pred             eeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCC--CCCeEEEECCC
Confidence            9999999876310                      0124567888888887777654  45666665543

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.22  E-value=1.5e-11  Score=111.43  Aligned_cols=172  Identities=12%  Similarity=0.008  Sum_probs=109.2

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecCc--hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDE--KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSL   76 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~-------~Vii~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~   76 (298)
                      .++++||||+|.||++++..|+++|+       +|++.++++  .+.......+....     +.++ .|+++.+++.++
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~-----~~~~-~di~~~~~~~~a   77 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA-----FPLL-AGLEATDDPKVA   77 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT-----CTTE-EEEEEESCHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccc-----cccc-CCeEeccChHHH
Confidence            35799999999999999999999996       899999875  22333333443221     1222 577765555444


Q ss_pred             HHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhc
Q 022357           77 ADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE  156 (298)
Q Consensus        77 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~  156 (298)
                      ++       ..|+|||.||.....                             .+...+.+++|+.++..+++++...- 
T Consensus        78 ~~-------~~D~Vih~Ag~~~~~-----------------------------~~~~~~~~~~Nv~~t~~l~~a~~~~~-  120 (327)
T 1y7t_A           78 FK-------DADYALLVGAAPRKA-----------------------------GMERRDLLQVNGKIFTEQGRALAEVA-  120 (327)
T ss_dssp             TT-------TCSEEEECCCCCCCT-----------------------------TCCHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred             hC-------CCCEEEECCCcCCCC-----------------------------CCCHHHHHHHHHHHHHHHHHHHHhhc-
Confidence            42       689999999975321                             01123568999999999999887641 


Q ss_pred             cCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCC-CCCCCchhhhHHHHHHHHHH
Q 022357          157 LSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRG-WCPHSSAYKVSKAVINAYTR  235 (298)
Q Consensus       157 ~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~sK~al~~l~~  235 (298)
                       ....+++++|+......                           +...       ... .++....|+.+|...+.+.+
T Consensus       121 -~~~~~vvv~snp~~~~~---------------------------~~~~-------~~~~~~~p~~~yg~tkl~~er~~~  165 (327)
T 1y7t_A          121 -KKDVKVLVVGNPANTNA---------------------------LIAY-------KNAPGLNPRNFTAMTRLDHNRAKA  165 (327)
T ss_dssp             -CTTCEEEECSSSHHHHH---------------------------HHHH-------HTCTTSCGGGEEECCHHHHHHHHH
T ss_pred             -CCCeEEEEeCCchhhhH---------------------------HHHH-------HHcCCCChhheeccchHHHHHHHH
Confidence             13457888777432110                           0000       001 12334579999999999888


Q ss_pred             HHHHhCCCcEEEEeeCCeeec
Q 022357          236 ILAKRYPKFCVNCVCPGFVKT  256 (298)
Q Consensus       236 ~la~e~~~i~vn~v~PG~v~t  256 (298)
                      .++..+ ++.+..|.|..|..
T Consensus       166 ~~a~~~-g~~~~~vr~~~V~G  185 (327)
T 1y7t_A          166 QLAKKT-GTGVDRIRRMTVWG  185 (327)
T ss_dssp             HHHHHH-TCCGGGEECCEEEB
T ss_pred             HHHHHh-CcChhheeeeEEEc
Confidence            888765 44444455544443

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.04  E-value=1.7e-10  Score=98.66  Aligned_cols=81  Identities=14%  Similarity=0.236  Sum_probs=62.0

Q ss_pred             cCCCcEEEEeCC----------------CCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEec
Q 022357            3 EATKKYAVVTGS----------------NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD   66 (298)
Q Consensus         3 ~~~~~~vlITGa----------------s~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D   66 (298)
                      ++.||++|||||                |||||+++|+.|+++|++|++++++.. +.       ...      ....+|
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-------~~~------g~~~~d   70 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-------TPP------FVKRVD   70 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-------CCT------TEEEEE
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-------cCC------CCeEEc
Confidence            478999999999                699999999999999999999987652 11       010      122467


Q ss_pred             cCcHHHHHHHHHHHHHhcCCccEEEEccccCCcc
Q 022357           67 ISDLASVSSLADFIKTQFGKLDILANNAGIASVK  100 (298)
Q Consensus        67 ls~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~  100 (298)
                      +++.   +.+++.+.+.++++|++|||||+....
T Consensus        71 v~~~---~~~~~~v~~~~~~~Dili~~Aav~d~~  101 (226)
T 1u7z_A           71 VMTA---LEMEAAVNASVQQQNIFIGCAAVADYR  101 (226)
T ss_dssp             CCSH---HHHHHHHHHHGGGCSEEEECCBCCSEE
T ss_pred             cCcH---HHHHHHHHHhcCCCCEEEECCcccCCC
Confidence            7765   445667777889999999999987543

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.86  E-value=1.9e-09  Score=92.46  Aligned_cols=81  Identities=15%  Similarity=0.165  Sum_probs=60.3

Q ss_pred             CCcEEEEeCC----------------CCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccC
Q 022357            5 TKKYAVVTGS----------------NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS   68 (298)
Q Consensus         5 ~~~~vlITGa----------------s~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls   68 (298)
                      .||+||||||                ||++|.++|+.|+++|++|++++|......        ....  .+     |+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------~~~~--~~-----~~~   66 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------EPHP--NL-----SIR   66 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------CCCT--TE-----EEE
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cCCC--Ce-----EEE
Confidence            5899999999                888999999999999999999998753100        0000  12     333


Q ss_pred             cHHHHHHHHHHHHHhcCCccEEEEccccCCcc
Q 022357           69 DLASVSSLADFIKTQFGKLDILANNAGIASVK  100 (298)
Q Consensus        69 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~  100 (298)
                      +.+++++..+.+.+.++++|++|+||++....
T Consensus        67 ~v~s~~em~~~v~~~~~~~Dili~aAAvsD~~   98 (232)
T 2gk4_A           67 EITNTKDLLIEMQERVQDYQVLIHSMAVSDYT   98 (232)
T ss_dssp             ECCSHHHHHHHHHHHGGGCSEEEECSBCCSEE
T ss_pred             EHhHHHHHHHHHHHhcCCCCEEEEcCcccccc
Confidence            33466667777778888999999999987554

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.85  E-value=1.2e-08  Score=77.51  Aligned_cols=75  Identities=17%  Similarity=0.117  Sum_probs=61.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+++++|+|+ |++|+++++.|.++| ++|++++|++++.+...    ..     .+..+.+|+++.+++.++++     
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~-----~~~~~~~d~~~~~~~~~~~~-----   68 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RM-----GVATKQVDAKDEAGLAKALG-----   68 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TT-----TCEEEECCTTCHHHHHHHTT-----
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hC-----CCcEEEecCCCHHHHHHHHc-----
Confidence            4578999999 999999999999999 89999999987655443    11     16778899999888776653     


Q ss_pred             cCCccEEEEcccc
Q 022357           84 FGKLDILANNAGI   96 (298)
Q Consensus        84 ~g~id~lv~nAg~   96 (298)
                        .+|++|++++.
T Consensus        69 --~~d~vi~~~~~   79 (118)
T 3ic5_A           69 --GFDAVISAAPF   79 (118)
T ss_dssp             --TCSEEEECSCG
T ss_pred             --CCCEEEECCCc
Confidence              78999999963

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.75  E-value=5.5e-08  Score=90.58  Aligned_cols=83  Identities=19%  Similarity=0.239  Sum_probs=71.0

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCC---CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKG---ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G---~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ++++|+|| |+||+++++.|+++|   .+|++.+|+.++++...+++...+..  .+..+.+|+++.++++++++..   
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~--~~~~~~~D~~d~~~l~~~l~~~---   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYG--EIDITTVDADSIEELVALINEV---   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCC--CCEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCC--ceEEEEecCCCHHHHHHHHHhh---
Confidence            47899999 899999999999998   48999999999988888888764322  2788999999999999988765   


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                        ++|+||||++..
T Consensus        76 --~~DvVin~ag~~   87 (405)
T 4ina_A           76 --KPQIVLNIALPY   87 (405)
T ss_dssp             --CCSEEEECSCGG
T ss_pred             --CCCEEEECCCcc
Confidence              689999999864

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.72  E-value=1.1e-08  Score=82.76  Aligned_cols=78  Identities=15%  Similarity=0.205  Sum_probs=64.3

Q ss_pred             CchhHHHHHHHHHCCCEEEEEecCchhhH---HHHHHHHhcCCCCcceeEEEeccCcH--HHHHHHHHHHHHhcCCccEE
Q 022357           16 KGIGFETVRQLASKGITVVLTARDEKRGL---EAVEKLKASGVDPELLLFHQLDISDL--ASVSSLADFIKTQFGKLDIL   90 (298)
Q Consensus        16 ~gIG~a~a~~La~~G~~Vii~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dls~~--~~v~~~~~~~~~~~g~id~l   90 (298)
                      +.++.+.+..|++.|++|++..|+.....   +..+.+...+..   ...+++|++++  ++++++++.+.+.+|+ |+|
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~---~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVL  101 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMD---YVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVL  101 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCE---EEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCe---EEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEE
Confidence            46889999999999999999998765432   234555555543   78889999999  9999999999998999 999


Q ss_pred             EEccccC
Q 022357           91 ANNAGIA   97 (298)
Q Consensus        91 v~nAg~~   97 (298)
                      |||||..
T Consensus       102 VnnAgg~  108 (157)
T 3gxh_A          102 VHCLANY  108 (157)
T ss_dssp             EECSBSH
T ss_pred             EECCCCC
Confidence            9999975

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.70  E-value=1.3e-10  Score=109.62  Aligned_cols=44  Identities=30%  Similarity=0.335  Sum_probs=38.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV   47 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~   47 (298)
                      ++.||+++|||++ +||+++|+.|+..|++|+++++++.+..+..
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            4689999999987 9999999999999999999999876654433

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.54  E-value=1.1e-07  Score=89.69  Aligned_cols=77  Identities=18%  Similarity=0.170  Sum_probs=60.5

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +++++|+| +|++|++++..|++.|++|++.+|+.+++....+.+    .   .+..+++|+++.++++++++       
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~---~~~~~~~Dv~d~~~l~~~l~-------   67 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----Q---HSTPISLDVNDDAALDAEVA-------   67 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----T---TEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----C---CceEEEeecCCHHHHHHHHc-------
Confidence            57899998 799999999999999999999999976554433221    1   16678899999988777653       


Q ss_pred             CccEEEEccccC
Q 022357           86 KLDILANNAGIA   97 (298)
Q Consensus        86 ~id~lv~nAg~~   97 (298)
                      .+|+||||++..
T Consensus        68 ~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 KHDLVISLIPYT   79 (450)
T ss_dssp             TSSEEEECCC--
T ss_pred             CCcEEEECCccc
Confidence            699999999864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.51  E-value=1.3e-07  Score=78.80  Aligned_cols=79  Identities=14%  Similarity=0.180  Sum_probs=56.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++++||||+||||+++++.+...|++|++++|++++.+..    +..+..      ..+|.++.+..+.+.+...  .
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~~------~~~d~~~~~~~~~~~~~~~--~  105 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVE------YVGDSRSVDFADEILELTD--G  105 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCS------EEEETTCSTHHHHHHHHTT--T
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCC------EEeeCCcHHHHHHHHHHhC--C
Confidence            478999999999999999999999999999999987654332    222221      1247776554444333221  1


Q ss_pred             CCccEEEEccc
Q 022357           85 GKLDILANNAG   95 (298)
Q Consensus        85 g~id~lv~nAg   95 (298)
                      +.+|++|+|+|
T Consensus       106 ~~~D~vi~~~g  116 (198)
T 1pqw_A          106 YGVDVVLNSLA  116 (198)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCCeEEEECCc
Confidence            36999999997

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.49  E-value=6.7e-08  Score=85.82  Aligned_cols=80  Identities=16%  Similarity=0.268  Sum_probs=60.4

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|+++|||++ |+|++++..|++.| +|++.+|+.++++++.+++.......  . .+.+|+++.          .+.
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~--~-~~~~d~~~~----------~~~  190 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKK--F-GEEVKFSGL----------DVD  190 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCC--H-HHHEEEECT----------TCC
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccc--c-ceeEEEeeH----------HHh
Confidence            578999999997 99999999999999 99999999888888877775421110  1 123455442          334


Q ss_pred             cCCccEEEEccccCC
Q 022357           84 FGKLDILANNAGIAS   98 (298)
Q Consensus        84 ~g~id~lv~nAg~~~   98 (298)
                      ++++|+||||+|...
T Consensus       191 ~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          191 LDGVDIIINATPIGM  205 (287)
T ss_dssp             CTTCCEEEECSCTTC
T ss_pred             hCCCCEEEECCCCCC
Confidence            578999999999754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.49  E-value=2.3e-07  Score=85.25  Aligned_cols=77  Identities=14%  Similarity=0.123  Sum_probs=59.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+++++|+|+ |+||+++++.+...|++|++++|++++++...+.+   +.     . +.+|.++.+++++++.     
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~-----~-~~~~~~~~~~l~~~~~-----  228 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GG-----R-VITLTATEANIKKSVQ-----  228 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT-----S-EEEEECCHHHHHHHHH-----
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cc-----e-EEEecCCHHHHHHHHh-----
Confidence            56899999999 99999999999999999999999987655443322   21     1 4567777777766654     


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                        ..|++|++++..
T Consensus       229 --~~DvVi~~~g~~  240 (369)
T 2eez_A          229 --HADLLIGAVLVP  240 (369)
T ss_dssp             --HCSEEEECCC--
T ss_pred             --CCCEEEECCCCC
Confidence              579999999864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.46  E-value=2.6e-07  Score=83.38  Aligned_cols=80  Identities=16%  Similarity=0.173  Sum_probs=59.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++++||||+||||.++++.+...|++|++++|++++++.. +++   +..      ..+|.++.+++.+.+.++..  
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~------~~~d~~~~~~~~~~~~~~~~--  212 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFD------AAFNYKTVNSLEEALKKASP--  212 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCS------EEEETTSCSCHHHHHHHHCT--
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCc------EEEecCCHHHHHHHHHHHhC--
Confidence            478999999999999999999999999999999987665443 332   221      23577774455555544432  


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|++|+|+|.
T Consensus       213 ~~~d~vi~~~g~  224 (333)
T 1v3u_A          213 DGYDCYFDNVGG  224 (333)
T ss_dssp             TCEEEEEESSCH
T ss_pred             CCCeEEEECCCh
Confidence            579999999984

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.41  E-value=1.9e-06  Score=77.29  Aligned_cols=81  Identities=20%  Similarity=0.238  Sum_probs=62.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC---chhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD---EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      +.+|+++|+|+ ||+|++++..|++.|+ +|++..|+   .++++++.+++....+    ..+...++.+.+++.+.+. 
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~----~~~~~~~~~~~~~l~~~l~-  225 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD----CKAQLFDIEDHEQLRKEIA-  225 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS----CEEEEEETTCHHHHHHHHH-
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC----CceEEeccchHHHHHhhhc-
Confidence            57899999998 7999999999999999 89999999   7788888888876432    2333456666655554443 


Q ss_pred             HHHhcCCccEEEEcccc
Q 022357           80 IKTQFGKLDILANNAGI   96 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~   96 (298)
                            ..|+|||+...
T Consensus       226 ------~aDiIINaTp~  236 (315)
T 3tnl_A          226 ------ESVIFTNATGV  236 (315)
T ss_dssp             ------TCSEEEECSST
T ss_pred             ------CCCEEEECccC
Confidence                  67999998754

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.36  E-value=1.1e-06  Score=69.01  Aligned_cols=79  Identities=20%  Similarity=0.209  Sum_probs=58.7

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+..++++|+|+ |.+|+++++.|.++|++|++++++++..+...    ..+     ..++..|.++.+.++++    
T Consensus         1 m~~~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~----~~~-----~~~~~gd~~~~~~l~~~----   66 (141)
T 3llv_A            1 MTENGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE----DEG-----FDAVIADPTDESFYRSL----   66 (141)
T ss_dssp             -----CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HTT-----CEEEECCTTCHHHHHHS----
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH----HCC-----CcEEECCCCCHHHHHhC----
Confidence            55556678999998 78999999999999999999999976544433    222     66788999999876654    


Q ss_pred             HHhcCCccEEEEccc
Q 022357           81 KTQFGKLDILANNAG   95 (298)
Q Consensus        81 ~~~~g~id~lv~nAg   95 (298)
                        .....|++|.+.+
T Consensus        67 --~~~~~d~vi~~~~   79 (141)
T 3llv_A           67 --DLEGVSAVLITGS   79 (141)
T ss_dssp             --CCTTCSEEEECCS
T ss_pred             --CcccCCEEEEecC
Confidence              1247899998876

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.35  E-value=9.9e-07  Score=83.48  Aligned_cols=79  Identities=16%  Similarity=0.178  Sum_probs=62.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+.+++++|+|+ ||+|++++..|+++ |++|++.+|+.++++++.+.   .  .   +..+.+|+++.+++.++++   
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~---~--~---~~~~~~D~~d~~~l~~~l~---   87 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP---S--G---SKAISLDVTDDSALDKVLA---   87 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG---G--T---CEEEECCTTCHHHHHHHHH---
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh---c--C---CcEEEEecCCHHHHHHHHc---
Confidence            356789999998 99999999999998 78999999998776555433   1  1   5667899999888777664   


Q ss_pred             HhcCCccEEEEccccC
Q 022357           82 TQFGKLDILANNAGIA   97 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~   97 (298)
                          .+|+|||+++..
T Consensus        88 ----~~DvVIn~tp~~   99 (467)
T 2axq_A           88 ----DNDVVISLIPYT   99 (467)
T ss_dssp             ----TSSEEEECSCGG
T ss_pred             ----CCCEEEECCchh
Confidence                689999999864

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.31  E-value=2.4e-07  Score=89.02  Aligned_cols=74  Identities=27%  Similarity=0.346  Sum_probs=49.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|+++|||| ||+|++++..|++.|++|++++|+.++++++.+++.   ..   +.    ++.+   ++++      .
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~---~~---~~----~~~d---l~~~------~  421 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG---GK---AL----SLTD---LDNY------H  421 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT---C----CE----ETTT---TTTC-------
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---Cc---ee----eHHH---hhhc------c
Confidence            46789999999 599999999999999999999999888777766552   11   21    1222   1110      1


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                      .+.+|+||||+|+.
T Consensus       422 ~~~~DilVN~agvg  435 (523)
T 2o7s_A          422 PEDGMVLANTTSMG  435 (523)
T ss_dssp             -CCSEEEEECSSTT
T ss_pred             ccCceEEEECCCCC
Confidence            13589999999974

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.31  E-value=3.8e-07  Score=71.42  Aligned_cols=80  Identities=16%  Similarity=0.147  Sum_probs=56.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+++++++|+|+ |++|+.+++.|.+.|++|++++|+++..+.    +...+     ...+..|.++.+.++++    
T Consensus         1 m~~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~----~~~~~-----~~~~~~d~~~~~~l~~~----   66 (144)
T 2hmt_A            1 MGRIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA----YASYA-----THAVIANATEENELLSL----   66 (144)
T ss_dssp             -----CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT----TTTTC-----SEEEECCTTCHHHHHTT----
T ss_pred             CCCCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHhC-----CEEEEeCCCCHHHHHhc----
Confidence            66777788999998 999999999999999999999998654322    21111     45677898887655433    


Q ss_pred             HHhcCCccEEEEcccc
Q 022357           81 KTQFGKLDILANNAGI   96 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~   96 (298)
                        .....|++|++++.
T Consensus        67 --~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           67 --GIRNFEYVIVAIGA   80 (144)
T ss_dssp             --TGGGCSEEEECCCS
T ss_pred             --CCCCCCEEEECCCC
Confidence              12478999999874

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.30  E-value=1.5e-06  Score=79.01  Aligned_cols=80  Identities=13%  Similarity=0.101  Sum_probs=60.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++++||+||+||||+++++.+...|++|++++|++++.+. +.+   .+..      ..+|.++.+++.+.+.++... 
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~-~~~---~g~~------~~~d~~~~~~~~~~~~~~~~~-  237 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEEL-FRS---IGGE------VFIDFTKEKDIVGAVLKATDG-  237 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHH-HHH---TTCC------EEEETTTCSCHHHHHHHHHTS-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHH-HHH---cCCc------eEEecCccHhHHHHHHHHhCC-
Confidence            47899999999999999999999999999999998776533 222   2221      234777656666666655443 


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                       .+|++|+|+|.
T Consensus       238 -~~D~vi~~~g~  248 (347)
T 2hcy_A          238 -GAHGVINVSVS  248 (347)
T ss_dssp             -CEEEEEECSSC
T ss_pred             -CCCEEEECCCc
Confidence             79999999984

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.26  E-value=1.9e-06  Score=77.70  Aligned_cols=80  Identities=21%  Similarity=0.317  Sum_probs=57.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++++||||+||||.++++.+...|++|++++|++++++... ++   +..      ..+|.++.+..+.+.+.. .. 
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---g~~------~~~d~~~~~~~~~i~~~~-~~-  212 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL---GCH------HTINYSTQDFAEVVREIT-GG-  212 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCS------EEEETTTSCHHHHHHHHH-TT-
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCC------EEEECCCHHHHHHHHHHh-CC-
Confidence            4789999999999999999999999999999999976655432 22   221      234666654444443322 11 


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      ..+|++|+|+|.
T Consensus       213 ~~~d~vi~~~g~  224 (333)
T 1wly_A          213 KGVDVVYDSIGK  224 (333)
T ss_dssp             CCEEEEEECSCT
T ss_pred             CCCeEEEECCcH
Confidence            369999999985

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.25  E-value=1.4e-06  Score=78.36  Aligned_cols=79  Identities=13%  Similarity=0.214  Sum_probs=56.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++++||||+||||.++++.+...|++|++++|++++++...+ +   +..      ..+|.++.+..+.+.+.+.  .
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~------~~~~~~~~~~~~~~~~~~~--~  207 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAW------QVINYREEDLVERLKEITG--G  207 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCS------EEEETTTSCHHHHHHHHTT--T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCC------EEEECCCccHHHHHHHHhC--C
Confidence            47899999999999999999999999999999998766544332 2   221      1246666554444433221  1


Q ss_pred             CCccEEEEccc
Q 022357           85 GKLDILANNAG   95 (298)
Q Consensus        85 g~id~lv~nAg   95 (298)
                      ..+|++|+|+|
T Consensus       208 ~~~D~vi~~~g  218 (327)
T 1qor_A          208 KKVRVVYDSVG  218 (327)
T ss_dssp             CCEEEEEECSC
T ss_pred             CCceEEEECCc
Confidence            26999999998

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.23  E-value=1.2e-06  Score=77.13  Aligned_cols=76  Identities=17%  Similarity=0.241  Sum_probs=57.0

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|+++|+|+ ||+|++++..|++.|++|++.+|+.++++++.+++...+ .   +.  ..|+   +++       .+ 
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~---~~--~~~~---~~~-------~~-  178 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-S---IQ--ALSM---DEL-------EG-  178 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-S---EE--ECCS---GGG-------TT-
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-C---ee--EecH---HHh-------cc-
Confidence            56899999998 799999999999999999999999888777776654321 1   21  1232   221       11 


Q ss_pred             cCCccEEEEccccCC
Q 022357           84 FGKLDILANNAGIAS   98 (298)
Q Consensus        84 ~g~id~lv~nAg~~~   98 (298)
                       +.+|+||+|++...
T Consensus       179 -~~~DivVn~t~~~~  192 (271)
T 1nyt_A          179 -HEFDLIINATSSGI  192 (271)
T ss_dssp             -CCCSEEEECCSCGG
T ss_pred             -CCCCEEEECCCCCC
Confidence             58999999998653

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.22  E-value=2.4e-06  Score=77.21  Aligned_cols=121  Identities=12%  Similarity=0.040  Sum_probs=79.3

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecC----chhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI-------TVVLTARD----EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVS   74 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~-------~Vii~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~   74 (298)
                      .++++||||+|.||..++..|+.+|.       +|++.+++    ++++...+..+......   +   ..|+....+..
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~---~---~~~i~~~~~~~   78 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFP---L---LAGMTAHADPM   78 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCT---T---EEEEEEESSHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccc---c---cCcEEEecCcH
Confidence            46899999999999999999999885       79999988    55565555566542111   1   13454444444


Q ss_pred             HHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhh
Q 022357           75 SLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL  154 (298)
Q Consensus        75 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  154 (298)
                      ++++       ..|+|||.||......                          .+   ..+.+..|+.....+++.+..+
T Consensus        79 ~al~-------~aD~Vi~~ag~~~~~g--------------------------~~---r~dl~~~N~~i~~~i~~~i~~~  122 (329)
T 1b8p_A           79 TAFK-------DADVALLVGARPRGPG--------------------------ME---RKDLLEANAQIFTVQGKAIDAV  122 (329)
T ss_dssp             HHTT-------TCSEEEECCCCCCCTT--------------------------CC---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhC-------CCCEEEEeCCCCCCCC--------------------------CC---HHHHHHHHHHHHHHHHHHHHHh
Confidence            4433       6899999999653210                          01   1234677777777777766553


Q ss_pred             hccCCCCcEEEEccCc
Q 022357          155 LELSDSPRLVNLSSYV  170 (298)
Q Consensus       155 ~~~~~~g~iv~vsS~~  170 (298)
                      -  ...+++|++|...
T Consensus       123 ~--~p~a~ii~~SNPv  136 (329)
T 1b8p_A          123 A--SRNIKVLVVGNPA  136 (329)
T ss_dssp             S--CTTCEEEECSSSH
T ss_pred             c--CCCeEEEEccCch
Confidence            1  1346788887644

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.17  E-value=1.9e-06  Score=78.00  Aligned_cols=81  Identities=16%  Similarity=0.123  Sum_probs=58.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++++||+||+||||..+++.+...|++|++++|++++++...++   .+..      ..+|.++.+++.+.+..+..  
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~---~g~~------~~~d~~~~~~~~~~~~~~~~--  223 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK---FGFD------DAFNYKEESDLTAALKRCFP--  223 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---SCCS------EEEETTSCSCSHHHHHHHCT--
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCc------eEEecCCHHHHHHHHHHHhC--
Confidence            478999999999999999999999999999999987665443222   2221      22466665455444444422  


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|++|+|+|.
T Consensus       224 ~~~d~vi~~~g~  235 (345)
T 2j3h_A          224 NGIDIYFENVGG  235 (345)
T ss_dssp             TCEEEEEESSCH
T ss_pred             CCCcEEEECCCH
Confidence            479999999984

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.15  E-value=3.9e-06  Score=76.41  Aligned_cols=80  Identities=18%  Similarity=0.254  Sum_probs=56.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++++|+||+||||.++++.+...|++|++++|++++++.. .++   +.+      ..+|.++.+.++.+.+.. . -
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~------~~~~~~~~~~~~~~~~~~-~-~  229 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAA------AGFNYKKEDFSEATLKFT-K-G  229 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCS------EEEETTTSCHHHHHHHHT-T-T
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCc------EEEecCChHHHHHHHHHh-c-C
Confidence            478999999999999999999999999999999998765544 332   221      234666554433332211 1 1


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      ..+|++|+|+|.
T Consensus       230 ~~~d~vi~~~G~  241 (354)
T 2j8z_A          230 AGVNLILDCIGG  241 (354)
T ss_dssp             SCEEEEEESSCG
T ss_pred             CCceEEEECCCc
Confidence            269999999984

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.14  E-value=4.5e-06  Score=76.03  Aligned_cols=80  Identities=15%  Similarity=0.279  Sum_probs=56.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++++|+||+||||.++++.+...|++|++++|++++++. +.   +.+..      ..+|.++.+..+.+.+.. . .
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~---~~ga~------~~~d~~~~~~~~~~~~~~-~-~  237 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI-VL---QNGAH------EVFNHREVNYIDKIKKYV-G-E  237 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HH---HTTCS------EEEETTSTTHHHHHHHHH-C-T
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH-HH---HcCCC------EEEeCCCchHHHHHHHHc-C-C
Confidence            47899999999999999999999999999999999776552 22   22321      235666654433333221 1 1


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      ..+|++|+|+|.
T Consensus       238 ~~~D~vi~~~G~  249 (351)
T 1yb5_A          238 KGIDIIIEMLAN  249 (351)
T ss_dssp             TCEEEEEESCHH
T ss_pred             CCcEEEEECCCh
Confidence            269999999984

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.09  E-value=5.8e-06  Score=74.56  Aligned_cols=80  Identities=21%  Similarity=0.209  Sum_probs=56.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++++||+||+||||.++++.+...|++|++++|++++.+...++   .+.+      ..+|.++.+..+.+.+ ..  .
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~---~g~~------~~~~~~~~~~~~~~~~-~~--~  216 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE---LGFD------GAIDYKNEDLAAGLKR-EC--P  216 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---TCCS------EEEETTTSCHHHHHHH-HC--T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCC------EEEECCCHHHHHHHHH-hc--C
Confidence            478999999999999999999989999999999988765544232   2221      1246665443333322 21  2


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|++|+|+|.
T Consensus       217 ~~~d~vi~~~g~  228 (336)
T 4b7c_A          217 KGIDVFFDNVGG  228 (336)
T ss_dssp             TCEEEEEESSCH
T ss_pred             CCceEEEECCCc
Confidence            379999999983

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.08  E-value=4.4e-06  Score=76.10  Aligned_cols=78  Identities=17%  Similarity=0.109  Sum_probs=54.7

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++++||||+||||..+++.+...|+ +|+++++++++.+...++   .+..      ..+|.++.+. .+.+.+...  +
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~------~~~d~~~~~~-~~~~~~~~~--~  229 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFD------AAINYKKDNV-AEQLRESCP--A  229 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCS------EEEETTTSCH-HHHHHHHCT--T
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCc------eEEecCchHH-HHHHHHhcC--C
Confidence            8999999999999999999999999 999999987655443322   2221      2356665433 222222221  2


Q ss_pred             CccEEEEcccc
Q 022357           86 KLDILANNAGI   96 (298)
Q Consensus        86 ~id~lv~nAg~   96 (298)
                      .+|++|+|+|.
T Consensus       230 ~~d~vi~~~G~  240 (357)
T 2zb4_A          230 GVDVYFDNVGG  240 (357)
T ss_dssp             CEEEEEESCCH
T ss_pred             CCCEEEECCCH
Confidence            69999999983

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.07  E-value=2.2e-05  Score=70.27  Aligned_cols=82  Identities=20%  Similarity=0.254  Sum_probs=60.0

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC---chhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD---EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      +.+|+++|+|+ ||.|++++..|++.|+ +|++..|+   .++++++.+++....+    ......+..+.+.+.+.+. 
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~----~~v~~~~~~~l~~~~~~l~-  219 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD----CVVTVTDLADQHAFTEALA-  219 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS----CEEEEEETTCHHHHHHHHH-
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC----cceEEechHhhhhhHhhcc-
Confidence            56899999998 8999999999999998 89999999   7778888888775432    2233345555433233222 


Q ss_pred             HHHhcCCccEEEEccccC
Q 022357           80 IKTQFGKLDILANNAGIA   97 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~   97 (298)
                            ..|+|||+....
T Consensus       220 ------~~DiIINaTp~G  231 (312)
T 3t4e_A          220 ------SADILTNGTKVG  231 (312)
T ss_dssp             ------HCSEEEECSSTT
T ss_pred             ------CceEEEECCcCC
Confidence                  469999987653

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.07  E-value=2.1e-05  Score=73.82  Aligned_cols=85  Identities=20%  Similarity=0.343  Sum_probs=58.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEE--eccC---------cHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ--LDIS---------DLASV   73 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~Dls---------~~~~v   73 (298)
                      .+++|||+||+|+||..++..+...|++|+++++++++++..    ++.+..   ..+..  .|..         +.+++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~----~~lGa~---~~i~~~~~~~~~~~~~~~~~~~~~~  292 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV----RALGCD---LVINRAELGITDDIADDPRRVVETG  292 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCC---CEEEHHHHTCCTTGGGCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HhcCCC---EEEecccccccccccccccccchhh
Confidence            478999999999999999988888999999999887665443    233332   11111  1211         12345


Q ss_pred             HHHHHHHHHhcC-CccEEEEcccc
Q 022357           74 SSLADFIKTQFG-KLDILANNAGI   96 (298)
Q Consensus        74 ~~~~~~~~~~~g-~id~lv~nAg~   96 (298)
                      +.+.+.+.+..+ .+|++|+|+|.
T Consensus       293 ~~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          293 RKLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHHHSSCCSEEEECSCH
T ss_pred             hHHHHHHHHHhCCCceEEEECCCc
Confidence            555666666555 69999999984

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.07  E-value=1.2e-05  Score=71.08  Aligned_cols=80  Identities=15%  Similarity=0.213  Sum_probs=59.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+.+|+++|+|+ ||+|++++..|++.|+ +|++.+|+.++.+++.+++......   +.+...+..   ++.+.+.   
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~---~~i~~~~~~---~l~~~l~---  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGR---EAVVGVDAR---GIEDVIA---  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTS---CCEEEECST---THHHHHH---
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCC---ceEEEcCHH---HHHHHHh---
Confidence            467899999998 8999999999999999 7999999999988888888754322   223333332   3333333   


Q ss_pred             HhcCCccEEEEcccc
Q 022357           82 TQFGKLDILANNAGI   96 (298)
Q Consensus        82 ~~~g~id~lv~nAg~   96 (298)
                          ..|+|||+...
T Consensus       194 ----~~DiVInaTp~  204 (283)
T 3jyo_A          194 ----AADGVVNATPM  204 (283)
T ss_dssp             ----HSSEEEECSST
T ss_pred             ----cCCEEEECCCC
Confidence                46999998754

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.01  E-value=1.1e-05  Score=73.12  Aligned_cols=80  Identities=19%  Similarity=0.229  Sum_probs=55.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+++++||||+||||..+++.+... |++|+++++++++++.. .++   +.+      ..+|.++.+.++.+ .++...
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~------~~~~~~~~~~~~~~-~~~~~~  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA---GAD------YVINASMQDPLAEI-RRITES  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH---TCS------EEEETTTSCHHHHH-HHHTTT
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCC------EEecCCCccHHHHH-HHHhcC
Confidence            5789999999999999999999998 99999999987765443 222   221      12355554333322 222211


Q ss_pred             cCCccEEEEcccc
Q 022357           84 FGKLDILANNAGI   96 (298)
Q Consensus        84 ~g~id~lv~nAg~   96 (298)
                       +.+|++|+|+|.
T Consensus       239 -~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 -KGVDAVIDLNNS  250 (347)
T ss_dssp             -SCEEEEEESCCC
T ss_pred             -CCceEEEECCCC
Confidence             479999999984

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.99  E-value=1.9e-05  Score=71.78  Aligned_cols=79  Identities=15%  Similarity=0.180  Sum_probs=56.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++++||+||+|+||.+++..+...|++|+++++++++++... +   .+.+    .  .+|.++.+..+.+. ++.  .
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~----~--~~~~~~~~~~~~~~-~~~--~  233 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-R---LGAK----R--GINYRSEDFAAVIK-AET--G  233 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H---HTCS----E--EEETTTSCHHHHHH-HHH--S
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-h---cCCC----E--EEeCCchHHHHHHH-HHh--C
Confidence            4789999999999999999999999999999999987655433 2   2322    1  24555544333333 222  3


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|++|+|+|.
T Consensus       234 ~g~Dvvid~~g~  245 (353)
T 4dup_A          234 QGVDIILDMIGA  245 (353)
T ss_dssp             SCEEEEEESCCG
T ss_pred             CCceEEEECCCH
Confidence            479999999984

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.98  E-value=8.6e-05  Score=66.89  Aligned_cols=79  Identities=10%  Similarity=0.087  Sum_probs=53.2

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .++++||||+|.+|..++..|+.+|  .+|++.+++++  .....++...... ..+..    +++..+.+++++     
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~-~~v~~----~~~t~d~~~al~-----   75 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTG-AVVRG----FLGQQQLEAALT-----   75 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSS-CEEEE----EESHHHHHHHHT-----
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhccccc-ceEEE----EeCCCCHHHHcC-----
Confidence            3589999999999999999999998  78999998765  3333344432211 01211    223444444443     


Q ss_pred             cCCccEEEEccccCC
Q 022357           84 FGKLDILANNAGIAS   98 (298)
Q Consensus        84 ~g~id~lv~nAg~~~   98 (298)
                        ..|++|++||...
T Consensus        76 --gaDvVi~~ag~~~   88 (326)
T 1smk_A           76 --GMDLIIVPAGVPR   88 (326)
T ss_dssp             --TCSEEEECCCCCC
T ss_pred             --CCCEEEEcCCcCC
Confidence              6899999999653

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.92  E-value=2.5e-05  Score=70.65  Aligned_cols=79  Identities=16%  Similarity=0.174  Sum_probs=55.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++++||+||+|+||..+++.+...|++|+++++++++++... ++   +.+    .  .+|.++.+- .+.+.++.. .
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---ga~----~--~~d~~~~~~-~~~~~~~~~-~  233 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---GAD----E--TVNYTHPDW-PKEVRRLTG-G  233 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCS----E--EEETTSTTH-HHHHHHHTT-T
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCC----E--EEcCCcccH-HHHHHHHhC-C
Confidence            4789999999999999999999999999999999877655442 22   221    1  246666432 222222211 1


Q ss_pred             CCccEEEEccc
Q 022357           85 GKLDILANNAG   95 (298)
Q Consensus        85 g~id~lv~nAg   95 (298)
                      ..+|++|+|+|
T Consensus       234 ~~~d~vi~~~g  244 (343)
T 2eih_A          234 KGADKVVDHTG  244 (343)
T ss_dssp             TCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence            37999999998

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.88  E-value=7.4e-05  Score=59.38  Aligned_cols=77  Identities=14%  Similarity=0.127  Sum_probs=56.5

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++.++|.|+ |.+|+.+++.|.+.|++|+++++++ ++.+...+.. ..+     +.++..|.++.+.++++      ..
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-~~~-----~~~i~gd~~~~~~l~~a------~i   69 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-GDN-----ADVIPGDSNDSSVLKKA------GI   69 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-CTT-----CEEEESCTTSHHHHHHH------TT
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-cCC-----CeEEEcCCCCHHHHHHc------Ch
Confidence            457888886 9999999999999999999999984 3333332222 111     67888999998876554      12


Q ss_pred             CCccEEEEccc
Q 022357           85 GKLDILANNAG   95 (298)
Q Consensus        85 g~id~lv~nAg   95 (298)
                      ...|.+|.+.+
T Consensus        70 ~~ad~vi~~~~   80 (153)
T 1id1_A           70 DRCRAILALSD   80 (153)
T ss_dssp             TTCSEEEECSS
T ss_pred             hhCCEEEEecC
Confidence            36899998875

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.87  E-value=2.3e-05  Score=70.33  Aligned_cols=78  Identities=13%  Similarity=0.124  Sum_probs=54.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++++|+||+|+||..+++.+...|++|+++++++++++... +   .+.+    .  ..|.++.+..+.+    .+..
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---~Ga~----~--~~~~~~~~~~~~~----~~~~  205 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-A---LGAW----E--TIDYSHEDVAKRV----LELT  205 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-H---HTCS----E--EEETTTSCHHHHH----HHHT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H---cCCC----E--EEeCCCccHHHHH----HHHh
Confidence            4789999999999999999988889999999999887655432 2   2321    1  2355544333332    2222


Q ss_pred             --CCccEEEEcccc
Q 022357           85 --GKLDILANNAGI   96 (298)
Q Consensus        85 --g~id~lv~nAg~   96 (298)
                        ..+|++|+|+|.
T Consensus       206 ~~~g~Dvvid~~g~  219 (325)
T 3jyn_A          206 DGKKCPVVYDGVGQ  219 (325)
T ss_dssp             TTCCEEEEEESSCG
T ss_pred             CCCCceEEEECCCh
Confidence              269999999984

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.86  E-value=4.3e-05  Score=59.16  Aligned_cols=75  Identities=19%  Similarity=0.312  Sum_probs=54.6

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +++++|+|+ |.+|+.+++.|.+.|++|++.+|+++..+...+.   .+     +.++..|.++.+.+.+.      ...
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~~-----~~~~~~d~~~~~~l~~~------~~~   68 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---ID-----ALVINGDCTKIKTLEDA------GIE   68 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CS-----SEEEESCTTSHHHHHHT------TTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---cC-----cEEEEcCCCCHHHHHHc------Ccc
Confidence            457899987 9999999999999999999999987654433221   11     45677888877654321      124


Q ss_pred             CccEEEEccc
Q 022357           86 KLDILANNAG   95 (298)
Q Consensus        86 ~id~lv~nAg   95 (298)
                      ..|++|++.+
T Consensus        69 ~~d~vi~~~~   78 (140)
T 1lss_A           69 DADMYIAVTG   78 (140)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEeeC
Confidence            6899999975

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.86  E-value=2.7e-05  Score=68.32  Aligned_cols=75  Identities=16%  Similarity=0.270  Sum_probs=56.4

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|+++|+|+ ||+|++++..|++.|++|++.+|+.++++++.+++...+ .   +..  +|+   +++.       + 
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~---~~~--~~~---~~~~-------~-  178 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-N---IQA--VSM---DSIP-------L-  178 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-C---EEE--EEG---GGCC-------C-
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-C---eEE--eeH---HHhc-------c-
Confidence            56899999998 899999999999999999999999988888877765421 1   222  233   1111       1 


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                       +..|+||++++..
T Consensus       179 -~~~DivIn~t~~~  191 (272)
T 1p77_A          179 -QTYDLVINATSAG  191 (272)
T ss_dssp             -SCCSEEEECCCC-
T ss_pred             -CCCCEEEECCCCC
Confidence             4799999999865

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.85  E-value=2.3e-05  Score=70.53  Aligned_cols=78  Identities=15%  Similarity=0.209  Sum_probs=54.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++++||+||+|+||..++..+...|++|+++++++++++.. .   +.+.+    .  .+|.++.+..+.+    .+..
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~---~~ga~----~--~~~~~~~~~~~~~----~~~~  213 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-K---EYGAE----Y--LINASKEDILRQV----LKFT  213 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---HTTCS----E--EEETTTSCHHHHH----HHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H---HcCCc----E--EEeCCCchHHHHH----HHHh
Confidence            578999999999999999999888999999999987765532 2   23322    1  2355544332322    2222


Q ss_pred             --CCccEEEEcccc
Q 022357           85 --GKLDILANNAGI   96 (298)
Q Consensus        85 --g~id~lv~nAg~   96 (298)
                        ..+|++|+|+|.
T Consensus       214 ~~~g~D~vid~~g~  227 (334)
T 3qwb_A          214 NGKGVDASFDSVGK  227 (334)
T ss_dssp             TTSCEEEEEECCGG
T ss_pred             CCCCceEEEECCCh
Confidence              269999999984

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.83  E-value=3.1e-05  Score=69.98  Aligned_cols=80  Identities=15%  Similarity=0.170  Sum_probs=54.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++++||+||+|+||..++..+...|++|+++++++++.+...+ +   +.+    .  .+|.++.+..+.+.+ ... -
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---ga~----~--~~~~~~~~~~~~~~~-~~~-~  211 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L---GAA----Y--VIDTSTAPLYETVME-LTN-G  211 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCS----E--EEETTTSCHHHHHHH-HTT-T
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C---CCc----E--EEeCCcccHHHHHHH-HhC-C
Confidence            47899999999999999998888889999999999877654432 2   222    1  235554433222222 211 1


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      ..+|++|+|+|.
T Consensus       212 ~g~Dvvid~~g~  223 (340)
T 3gms_A          212 IGADAAIDSIGG  223 (340)
T ss_dssp             SCEEEEEESSCH
T ss_pred             CCCcEEEECCCC
Confidence            269999999984

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.81  E-value=3.8e-05  Score=70.64  Aligned_cols=78  Identities=13%  Similarity=0.143  Sum_probs=56.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+++++|+|+ |+||+.+++.+...|++|++.+|++++++...+.+   +..   +   .++.++..++.+++.    
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~---~---~~~~~~~~~l~~~l~----  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGR---I---HTRYSSAYELEGAVK----  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---S---EEEECCHHHHHHHHH----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCe---e---EeccCCHHHHHHHHc----
Confidence            367899999999 99999999999999999999999987655443322   211   1   233445555554443    


Q ss_pred             hcCCccEEEEccccC
Q 022357           83 QFGKLDILANNAGIA   97 (298)
Q Consensus        83 ~~g~id~lv~nAg~~   97 (298)
                         ..|++|++++..
T Consensus       231 ---~aDvVi~~~~~p  242 (377)
T 2vhw_A          231 ---RADLVIGAVLVP  242 (377)
T ss_dssp             ---HCSEEEECCCCT
T ss_pred             ---CCCEEEECCCcC
Confidence               579999998754

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.79  E-value=2.7e-05  Score=69.83  Aligned_cols=80  Identities=15%  Similarity=0.120  Sum_probs=49.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEec--CchhhHHHHHHHHhcCCCCcceeEEEeccCcH-HHHHHHHHHHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTAR--DEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~--~Vii~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~   82 (298)
                      +++||||+|.||..++..|+.+|.  ++.+.++  ++++++.....+.....    +....+++++. +++.+++     
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~----~~~~~~~i~~~~d~l~~al-----   72 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALA----GTRSDANIYVESDENLRII-----   72 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHT----TSCCCCEEEEEETTCGGGG-----
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHH----hcCCCeEEEeCCcchHHHh-----
Confidence            699999999999999999998875  6888888  65545444444432110    00011222221 1122222     


Q ss_pred             hcCCccEEEEccccCC
Q 022357           83 QFGKLDILANNAGIAS   98 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~   98 (298)
                        ...|++||.||...
T Consensus        73 --~gaD~Vi~~Ag~~~   86 (313)
T 1hye_A           73 --DESDVVIITSGVPR   86 (313)
T ss_dssp             --TTCSEEEECCSCCC
T ss_pred             --CCCCEEEECCCCCC
Confidence              36899999999753

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.73  E-value=8e-05  Score=67.34  Aligned_cols=77  Identities=16%  Similarity=0.268  Sum_probs=53.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++++||+||+|+||..++..+...|++|+++++++++.+... ++   +.+    ..+  |..  +++.   +.+.+..
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---ga~----~v~--~~~--~~~~---~~v~~~~  223 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SV---GAD----IVL--PLE--EGWA---KAVREAT  223 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCS----EEE--ESS--TTHH---HHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCc----EEe--cCc--hhHH---HHHHHHh
Confidence            4789999999999999999999889999999999887764332 22   221    222  333  2322   2333333


Q ss_pred             C--CccEEEEcccc
Q 022357           85 G--KLDILANNAGI   96 (298)
Q Consensus        85 g--~id~lv~nAg~   96 (298)
                      +  .+|++|+|+|.
T Consensus       224 ~~~g~Dvvid~~g~  237 (342)
T 4eye_A          224 GGAGVDMVVDPIGG  237 (342)
T ss_dssp             TTSCEEEEEESCC-
T ss_pred             CCCCceEEEECCch
Confidence            2  69999999985

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.72  E-value=6.8e-05  Score=68.54  Aligned_cols=72  Identities=10%  Similarity=0.124  Sum_probs=57.4

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++|+|.|| |++|+.+++.|++ .+.|.+.+++.++++...    .      ....+++|++|.+++.++++       .
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~----~------~~~~~~~d~~d~~~l~~~~~-------~   77 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK----E------FATPLKVDASNFDKLVEVMK-------E   77 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT----T------TSEEEECCTTCHHHHHHHHT-------T
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh----c------cCCcEEEecCCHHHHHHHHh-------C
Confidence            47999998 9999999998875 689999999877655432    1      15678899999998887765       6


Q ss_pred             ccEEEEccccC
Q 022357           87 LDILANNAGIA   97 (298)
Q Consensus        87 id~lv~nAg~~   97 (298)
                      .|+||++++..
T Consensus        78 ~DvVi~~~p~~   88 (365)
T 3abi_A           78 FELVIGALPGF   88 (365)
T ss_dssp             CSEEEECCCGG
T ss_pred             CCEEEEecCCc
Confidence            79999998754

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.72  E-value=0.00013  Score=66.04  Aligned_cols=79  Identities=13%  Similarity=0.061  Sum_probs=53.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++++||+||+|+||..++..+...|++|+++++++++.+... +   .+.+    .  ..|.++.+-.+.+ .++... .
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~---~Ga~----~--~~~~~~~~~~~~v-~~~~~~-~  232 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-D---IGAA----H--VLNEKAPDFEATL-REVMKA-E  232 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-H---HTCS----E--EEETTSTTHHHHH-HHHHHH-H
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H---cCCC----E--EEECCcHHHHHHH-HHHhcC-C
Confidence            379999999999999999888888999999999887755442 2   2322    1  2344443332333 222221 2


Q ss_pred             CccEEEEcccc
Q 022357           86 KLDILANNAGI   96 (298)
Q Consensus        86 ~id~lv~nAg~   96 (298)
                      .+|++|.++|.
T Consensus       233 g~D~vid~~g~  243 (349)
T 3pi7_A          233 QPRIFLDAVTG  243 (349)
T ss_dssp             CCCEEEESSCH
T ss_pred             CCcEEEECCCC
Confidence            69999999984

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.69  E-value=7.4e-05  Score=68.19  Aligned_cols=74  Identities=20%  Similarity=0.297  Sum_probs=52.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc---hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE---KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+++++|+|+ |+||..+++.+...|++|+++++++   ++.+ .+.++   +     ...+  | ++ +-.+.+. + .
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~~~~---g-----a~~v--~-~~-~~~~~~~-~-~  243 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT-VIEET---K-----TNYY--N-SS-NGYDKLK-D-S  243 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH-HHHHH---T-----CEEE--E-CT-TCSHHHH-H-H
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH-HHHHh---C-----Ccee--c-hH-HHHHHHH-H-h
Confidence            3899999999 9999999998888999999999987   5542 22232   2     2222  5 44 2222222 2 2


Q ss_pred             HhcCCccEEEEcccc
Q 022357           82 TQFGKLDILANNAGI   96 (298)
Q Consensus        82 ~~~g~id~lv~nAg~   96 (298)
                       . +.+|++|+++|.
T Consensus       244 -~-~~~d~vid~~g~  256 (366)
T 2cdc_A          244 -V-GKFDVIIDATGA  256 (366)
T ss_dssp             -H-CCEEEEEECCCC
T ss_pred             -C-CCCCEEEECCCC
Confidence             2 579999999985

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.66  E-value=6.9e-05  Score=66.61  Aligned_cols=78  Identities=18%  Similarity=0.207  Sum_probs=55.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+.+++++|+|+ ||+|++++..|++.|+ +|++..|+.++++++.+++.....     ..     .+.+++.       
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-----~~-----~~~~~~~-------  199 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-----AY-----FSLAEAE-------  199 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-----CE-----ECHHHHH-------
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-----ce-----eeHHHHH-------
Confidence            356899999998 7999999999999998 999999998887776665432100     11     1222222       


Q ss_pred             HhcCCccEEEEccccCC
Q 022357           82 TQFGKLDILANNAGIAS   98 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~   98 (298)
                      +.....|+||++.+...
T Consensus       200 ~~~~~aDivIn~t~~~~  216 (297)
T 2egg_A          200 TRLAEYDIIINTTSVGM  216 (297)
T ss_dssp             HTGGGCSEEEECSCTTC
T ss_pred             hhhccCCEEEECCCCCC
Confidence            22347899999998653

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.63  E-value=0.00013  Score=57.36  Aligned_cols=73  Identities=14%  Similarity=0.155  Sum_probs=53.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++++|.|+ |++|+.++..|.+.|++|++.+|++++.+.+.+++.        ....  +..   ++.+.+.      
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~--------~~~~--~~~---~~~~~~~------   79 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE--------YEYV--LIN---DIDSLIK------   79 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT--------CEEE--ECS---CHHHHHH------
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC--------CceE--eec---CHHHHhc------
Confidence            3789999997 999999999999999999999999887776665543        1111  122   2333332      


Q ss_pred             CCccEEEEccccCC
Q 022357           85 GKLDILANNAGIAS   98 (298)
Q Consensus        85 g~id~lv~nAg~~~   98 (298)
                       ..|++|++.+...
T Consensus        80 -~~Divi~at~~~~   92 (144)
T 3oj0_A           80 -NNDVIITATSSKT   92 (144)
T ss_dssp             -TCSEEEECSCCSS
T ss_pred             -CCCEEEEeCCCCC
Confidence             5799999987653

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.62  E-value=0.00046  Score=61.44  Aligned_cols=77  Identities=17%  Similarity=0.163  Sum_probs=50.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEec--CchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTAR--DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~--~Vii~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++||||+|.+|..++..|+.+|.  ++.+.++  ++++++.....+.........+.+.. +  +.+.    +      
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a----~------   68 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED----T------   68 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG----G------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH----h------
Confidence            699999999999999999998875  6888888  76655544444443211111123322 1  1111    2      


Q ss_pred             cCCccEEEEccccCC
Q 022357           84 FGKLDILANNAGIAS   98 (298)
Q Consensus        84 ~g~id~lv~nAg~~~   98 (298)
                       ...|++|+.||...
T Consensus        69 -~~aDvVi~~ag~~~   82 (303)
T 1o6z_A           69 -AGSDVVVITAGIPR   82 (303)
T ss_dssp             -TTCSEEEECCCCCC
T ss_pred             -CCCCEEEEcCCCCC
Confidence             36899999999653

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.62  E-value=0.00027  Score=62.32  Aligned_cols=74  Identities=14%  Similarity=0.237  Sum_probs=56.4

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +.+|+++|+|+ ||+|++++..|++.|+ +|++..|+.++.+++.+++...+ .   +.....     +++.        
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~---~~~~~~-----~~l~--------  185 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-E---VKAQAF-----EQLK--------  185 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-C---EEEEEG-----GGCC--------
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-C---eeEeeH-----HHhc--------
Confidence            57899999998 7999999999999996 99999999998888888876532 1   333322     1111        


Q ss_pred             hcCCccEEEEccccC
Q 022357           83 QFGKLDILANNAGIA   97 (298)
Q Consensus        83 ~~g~id~lv~nAg~~   97 (298)
                        ...|+||++....
T Consensus       186 --~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 --QSYDVIINSTSAS  198 (281)
T ss_dssp             --SCEEEEEECSCCC
T ss_pred             --CCCCEEEEcCcCC
Confidence              3689999987653

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.60  E-value=0.00019  Score=65.53  Aligned_cols=77  Identities=14%  Similarity=0.126  Sum_probs=55.2

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+++++|+|+ |++|++++..+...|++|++++|++++++...+.....      +..   +..+.+++.+.+.     
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~------~~~---~~~~~~~~~~~~~-----  229 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR------VEL---LYSNSAEIETAVA-----  229 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG------SEE---EECCHHHHHHHHH-----
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCce------eEe---eeCCHHHHHHHHc-----
Confidence            45689999999 99999999999999999999999987766654433211      211   2233444433332     


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                        ..|++|++++..
T Consensus       230 --~~DvVI~~~~~~  241 (361)
T 1pjc_A          230 --EADLLIGAVLVP  241 (361)
T ss_dssp             --TCSEEEECCCCT
T ss_pred             --CCCEEEECCCcC
Confidence              689999999864

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.60  E-value=0.00011  Score=66.93  Aligned_cols=79  Identities=15%  Similarity=0.120  Sum_probs=53.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++++||+||+|+||..+++.+...|++|+++++++++.+...    +.+.+    ..  +|.++. ++.+.+.+..  -
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~----~~--~~~~~~-~~~~~~~~~~--~  229 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK----SLGCD----RP--INYKTE-PVGTVLKQEY--P  229 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCS----EE--EETTTS-CHHHHHHHHC--T
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HcCCc----EE--EecCCh-hHHHHHHHhc--C
Confidence            4789999999999999999998889999999999876554332    23322    12  344433 2333332221  1


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|++|+|+|.
T Consensus       230 ~g~D~vid~~g~  241 (362)
T 2c0c_A          230 EGVDVVYESVGG  241 (362)
T ss_dssp             TCEEEEEECSCT
T ss_pred             CCCCEEEECCCH
Confidence            369999999984

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.56  E-value=0.00014  Score=64.81  Aligned_cols=98  Identities=16%  Similarity=0.158  Sum_probs=61.9

Q ss_pred             CCCcE-EEEeCCCC-----------------c-hhHHHHHHHHHCCCEEEEEecCchhhH------H--HHHHHHhcCCC
Q 022357            4 ATKKY-AVVTGSNK-----------------G-IGFETVRQLASKGITVVLTARDEKRGL------E--AVEKLKASGVD   56 (298)
Q Consensus         4 ~~~~~-vlITGas~-----------------g-IG~a~a~~La~~G~~Vii~~r~~~~~~------~--~~~~~~~~~~~   56 (298)
                      +.||+ ||||+|..                 | .|.++|..++++||.|+++++...-..      .  .++.+......
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~  113 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA  113 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence            45666 99998765                 5 999999999999999999887532100      0  01111110001


Q ss_pred             CcceeEEEeccCcHHHHHHHHHHH------------------------------HHhcCCccEEEEccccCCccc
Q 022357           57 PELLLFHQLDISDLASVSSLADFI------------------------------KTQFGKLDILANNAGIASVKF  101 (298)
Q Consensus        57 ~~~~~~~~~Dls~~~~v~~~~~~~------------------------------~~~~g~id~lv~nAg~~~~~~  101 (298)
                      ...+..+.+|+....++.+++...                              .+.++..|++|.+|++.-..+
T Consensus       114 ~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf~~  188 (313)
T 1p9o_A          114 LSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFYV  188 (313)
T ss_dssp             CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSEEC
T ss_pred             ccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhccC
Confidence            111445666777666666665433                              244578999999999876543

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.54  E-value=0.00031  Score=66.05  Aligned_cols=84  Identities=13%  Similarity=0.219  Sum_probs=59.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEE---ec--------cCcHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ---LD--------ISDLASV   73 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~D--------ls~~~~v   73 (298)
                      .+.+|+|+||+|+||...+..+...|++|+++++++++++.+ +++   +.+    .++.   .|        .++..++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l---Ga~----~vi~~~~~d~~~~~~~~~~~~~~~  299 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM---GAE----AIIDRNAEGYRFWKDENTQDPKEW  299 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH---TCC----EEEETTTTTCCSEEETTEECHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh---CCc----EEEecCcCcccccccccccchHHH
Confidence            478999999999999999988888999999999887665433 332   321    1111   11        2455666


Q ss_pred             HHHHHHHHHhcC--CccEEEEcccc
Q 022357           74 SSLADFIKTQFG--KLDILANNAGI   96 (298)
Q Consensus        74 ~~~~~~~~~~~g--~id~lv~nAg~   96 (298)
                      +.+.+.+.+..+  .+|++|.++|.
T Consensus       300 ~~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          300 KRFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHHHHhCCCCCcEEEEcCCc
Confidence            777777776553  79999999984

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.54  E-value=0.00018  Score=63.70  Aligned_cols=74  Identities=15%  Similarity=0.200  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++++|+||+|++|..++..+...|++|+++++++++.+... +   .+.+    .  ..|.++.+++   .+.+    
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---~ga~----~--~~~~~~~~~~---~~~~----  187 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-A---LGAE----E--AATYAEVPER---AKAW----  187 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-H---TTCS----E--EEEGGGHHHH---HHHT----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-h---cCCC----E--EEECCcchhH---HHHh----
Confidence            4789999999999999999988889999999999887765432 2   2321    1  2355441222   2222    


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|++|+ +|.
T Consensus       188 ~~~d~vid-~g~  198 (302)
T 1iz0_A          188 GGLDLVLE-VRG  198 (302)
T ss_dssp             TSEEEEEE-CSC
T ss_pred             cCceEEEE-CCH
Confidence            47999999 874

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.53  E-value=0.00022  Score=64.24  Aligned_cols=77  Identities=17%  Similarity=0.174  Sum_probs=54.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++++|+|+ |+||..+++.+...|++|+++++++++++..    ++.+.+      ..+|.++.+ +.+.+.++.   
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~lGa~------~~~d~~~~~-~~~~~~~~~---  228 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA----KELGAD------LVVNPLKED-AAKFMKEKV---  228 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH----HHTTCS------EEECTTTSC-HHHHHHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHCCCC------EEecCCCcc-HHHHHHHHh---
Confidence            4789999999 8899999998888999999999987765543    223322      124666543 222222222   


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|++|+++|.
T Consensus       229 ~~~d~vid~~g~  240 (339)
T 1rjw_A          229 GGVHAAVVTAVS  240 (339)
T ss_dssp             SSEEEEEESSCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999984

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.51  E-value=0.0002  Score=65.27  Aligned_cols=76  Identities=21%  Similarity=0.256  Sum_probs=53.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|+|+ |+||..+++.+...|++|+++++++++.+...++   .+.+    .  .+|..+.+.+++       ..
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~---lGa~----~--v~~~~~~~~~~~-------~~  249 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN---FGAD----S--FLVSRDQEQMQA-------AA  249 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT---SCCS----E--EEETTCHHHHHH-------TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCCc----e--EEeccCHHHHHH-------hh
Confidence            5789999996 9999999998888999999999988765543322   2321    1  245555443322       23


Q ss_pred             CCccEEEEccccC
Q 022357           85 GKLDILANNAGIA   97 (298)
Q Consensus        85 g~id~lv~nAg~~   97 (298)
                      +.+|++|.++|..
T Consensus       250 ~~~D~vid~~g~~  262 (366)
T 1yqd_A          250 GTLDGIIDTVSAV  262 (366)
T ss_dssp             TCEEEEEECCSSC
T ss_pred             CCCCEEEECCCcH
Confidence            5799999999853

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.49  E-value=8.8e-05  Score=59.12  Aligned_cols=78  Identities=17%  Similarity=0.141  Sum_probs=55.4

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ..+++++|.|+ |.+|+.+++.|.+.|++|++++|++++.+....   ..+     ...+..|.++.+.+.++      .
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~g-----~~~~~~d~~~~~~l~~~------~   81 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EFS-----GFTVVGDAAEFETLKEC------G   81 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TCC-----SEEEESCTTSHHHHHTT------T
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cCC-----CcEEEecCCCHHHHHHc------C
Confidence            35678999996 999999999999999999999999876433210   111     44566788776543321      1


Q ss_pred             cCCccEEEEcccc
Q 022357           84 FGKLDILANNAGI   96 (298)
Q Consensus        84 ~g~id~lv~nAg~   96 (298)
                      ....|++|.+.+.
T Consensus        82 ~~~ad~Vi~~~~~   94 (155)
T 2g1u_A           82 MEKADMVFAFTND   94 (155)
T ss_dssp             GGGCSEEEECSSC
T ss_pred             cccCCEEEEEeCC
Confidence            2368999998763

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.47  E-value=0.00043  Score=62.57  Aligned_cols=78  Identities=17%  Similarity=0.155  Sum_probs=53.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.++||+||+|+||..++..+...|++|+++++++++++... +   .+.+    ..  .|..+  ++.+.+.++  ..
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~----~v--i~~~~--~~~~~~~~~--~~  215 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-K---MGAD----IV--LNHKE--SLLNQFKTQ--GI  215 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-H---HTCS----EE--ECTTS--CHHHHHHHH--TC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-h---cCCc----EE--EECCc--cHHHHHHHh--CC
Confidence            5789999999999999999888889999999999876644433 2   2322    12  23332  222222222  22


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|++|.++|.
T Consensus       216 ~g~Dvv~d~~g~  227 (346)
T 3fbg_A          216 ELVDYVFCTFNT  227 (346)
T ss_dssp             CCEEEEEESSCH
T ss_pred             CCccEEEECCCc
Confidence            379999999984

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.43  E-value=0.00037  Score=62.96  Aligned_cols=77  Identities=16%  Similarity=0.172  Sum_probs=51.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++++||+||+|+||..++..+...|++|+++ +++++++. +.+   .+.     ..  +| .+. ++.+.+.+... -
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~-~~~---lGa-----~~--i~-~~~-~~~~~~~~~~~-~  214 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEY-VRD---LGA-----TP--ID-ASR-EPEDYAAEHTA-G  214 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH-HHH---HTS-----EE--EE-TTS-CHHHHHHHHHT-T
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH-HHH---cCC-----CE--ec-cCC-CHHHHHHHHhc-C
Confidence            47899999999999999999888899999998 76655433 222   232     22  44 332 33333332221 1


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      ..+|++|.++|.
T Consensus       215 ~g~D~vid~~g~  226 (343)
T 3gaz_A          215 QGFDLVYDTLGG  226 (343)
T ss_dssp             SCEEEEEESSCT
T ss_pred             CCceEEEECCCc
Confidence            269999999983

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.40  E-value=0.00052  Score=59.32  Aligned_cols=82  Identities=18%  Similarity=0.236  Sum_probs=59.5

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhhHHHHHHHHhcCCCCcceeEE
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLFH   63 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   63 (298)
                      +.+++|+|.|+ ||+|.++++.|+..|. +|.+++++.                   .+.+...+.+....... .+..+
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~-~v~~~  106 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHI-AITPV  106 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTS-EEEEE
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCc-EEEEE
Confidence            45688999997 8999999999999997 899999987                   66777777777643321 24555


Q ss_pred             EeccCcHHHHHHHHHHHHHhcCCccEEEEccc
Q 022357           64 QLDISDLASVSSLADFIKTQFGKLDILANNAG   95 (298)
Q Consensus        64 ~~Dls~~~~v~~~~~~~~~~~g~id~lv~nAg   95 (298)
                      ..+++. +++.+++.       ..|+||.+..
T Consensus       107 ~~~~~~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLDD-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             CSCCCH-HHHHHHHH-------TSSEEEECCS
T ss_pred             eccCCH-hHHHHHHh-------CCCEEEEeCC
Confidence            555653 34444433       6899998875

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.37  E-value=0.00028  Score=59.42  Aligned_cols=73  Identities=16%  Similarity=0.147  Sum_probs=56.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +++|.|+ |.+|+.+++.|.++|+.|++++++++..+...+.   .+     ..++..|.++.+.++++      .....
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~~-----~~~i~gd~~~~~~l~~a------~i~~a   66 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---LK-----ATIIHGDGSHKEILRDA------EVSKN   66 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---SS-----SEEEESCTTSHHHHHHH------TCCTT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---cC-----CeEEEcCCCCHHHHHhc------CcccC
Confidence            5899997 9999999999999999999999998765544322   11     66788999998776654      12468


Q ss_pred             cEEEEccc
Q 022357           88 DILANNAG   95 (298)
Q Consensus        88 d~lv~nAg   95 (298)
                      |++|.+.+
T Consensus        67 d~vi~~~~   74 (218)
T 3l4b_C           67 DVVVILTP   74 (218)
T ss_dssp             CEEEECCS
T ss_pred             CEEEEecC
Confidence            99998765

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.35  E-value=0.0015  Score=58.47  Aligned_cols=77  Identities=14%  Similarity=0.082  Sum_probs=51.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            8 YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++.|+||+|.+|..++..|+.+|  .+|++.++++  .+.....+...... .++....    ...+.+.+++       
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~-~~l~~~~----~t~d~~~a~~-------   67 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETR-ATVKGYL----GPEQLPDCLK-------   67 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSS-CEEEEEE----SGGGHHHHHT-------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcC-ceEEEec----CCCCHHHHhC-------
Confidence            68999999999999999999988  7899999987  33444444432211 0111110    1123444333       


Q ss_pred             CccEEEEccccCC
Q 022357           86 KLDILANNAGIAS   98 (298)
Q Consensus        86 ~id~lv~nAg~~~   98 (298)
                      ..|++|+.+|...
T Consensus        68 ~aDvVvi~ag~~~   80 (314)
T 1mld_A           68 GCDVVVIPAGVPR   80 (314)
T ss_dssp             TCSEEEECCSCCC
T ss_pred             CCCEEEECCCcCC
Confidence            6799999999764

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.35  E-value=0.0011  Score=51.73  Aligned_cols=74  Identities=14%  Similarity=0.042  Sum_probs=57.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .+.++|.|+ |.+|+.+++.|.+.|+.|++++++++..+...    ..+     +.++..|.++.+.++++      ...
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~~g-----~~~i~gd~~~~~~l~~a------~i~   70 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----ERG-----VRAVLGNAANEEIMQLA------HLE   70 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HTT-----CEEEESCTTSHHHHHHT------TGG
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----HcC-----CCEEECCCCCHHHHHhc------Ccc
Confidence            356888887 89999999999999999999999987654432    222     66788999999876553      113


Q ss_pred             CccEEEEccc
Q 022357           86 KLDILANNAG   95 (298)
Q Consensus        86 ~id~lv~nAg   95 (298)
                      ..|.+|.+.+
T Consensus        71 ~ad~vi~~~~   80 (140)
T 3fwz_A           71 CAKWLILTIP   80 (140)
T ss_dssp             GCSEEEECCS
T ss_pred             cCCEEEEECC
Confidence            6789988875

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.31  E-value=0.00055  Score=62.00  Aligned_cols=80  Identities=14%  Similarity=0.135  Sum_probs=55.3

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +.++++.|+|++|.+|..++..++.+|  .+|++.+.++++++..+..+........++.+       ..+..+.++   
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-------t~d~~~al~---   75 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-------TSDIKEALT---   75 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-------ESCHHHHHT---
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-------cCCHHHHhC---
Confidence            456789999999999999999999998  48999999988777766666653221111221       112222232   


Q ss_pred             HhcCCccEEEEccccC
Q 022357           82 TQFGKLDILANNAGIA   97 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~   97 (298)
                          ..|++|.+||..
T Consensus        76 ----dADvVvitaG~p   87 (343)
T 3fi9_A           76 ----DAKYIVSSGGAP   87 (343)
T ss_dssp             ----TEEEEEECCC--
T ss_pred             ----CCCEEEEccCCC
Confidence                679999999974

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.30  E-value=0.00041  Score=56.58  Aligned_cols=77  Identities=13%  Similarity=0.132  Sum_probs=56.0

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +.+++++|.|+ |.+|+.+++.|.+. |++|+++++++++.+..    ...+     ...+..|.++.+.++++     .
T Consensus        37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~----~~~g-----~~~~~gd~~~~~~l~~~-----~  101 (183)
T 3c85_A           37 PGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQH----RSEG-----RNVISGDATDPDFWERI-----L  101 (183)
T ss_dssp             CTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH----HHTT-----CCEEECCTTCHHHHHTB-----C
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHH----HHCC-----CCEEEcCCCCHHHHHhc-----c
Confidence            34567888885 99999999999999 99999999998664442    3222     45677898887654432     0


Q ss_pred             hcCCccEEEEccc
Q 022357           83 QFGKLDILANNAG   95 (298)
Q Consensus        83 ~~g~id~lv~nAg   95 (298)
                      .....|++|.+.+
T Consensus       102 ~~~~ad~vi~~~~  114 (183)
T 3c85_A          102 DTGHVKLVLLAMP  114 (183)
T ss_dssp             SCCCCCEEEECCS
T ss_pred             CCCCCCEEEEeCC
Confidence            1236899998765

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.23  E-value=0.00048  Score=62.16  Aligned_cols=78  Identities=14%  Similarity=0.128  Sum_probs=52.0

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC--E-----EEEEecCc--hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI--T-----VVLTARDE--KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~--~-----Vii~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      .+++||||+|.||.+++..|+..|.  +     |++.++++  +.++..+.++.......  ..    ++....+..+.+
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~--~~----~~~~~~~~~~~~   77 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL--LK----DVIATDKEEIAF   77 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT--EE----EEEEESCHHHHT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcc--cC----CEEEcCCcHHHh
Confidence            5799999999999999999998775  4     88999875  35566666666532111  11    121111212222


Q ss_pred             HHHHHhcCCccEEEEccccC
Q 022357           78 DFIKTQFGKLDILANNAGIA   97 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~   97 (298)
                             ...|++|+.||..
T Consensus        78 -------~daDvVvitAg~p   90 (333)
T 5mdh_A           78 -------KDLDVAILVGSMP   90 (333)
T ss_dssp             -------TTCSEEEECCSCC
T ss_pred             -------CCCCEEEEeCCCC
Confidence                   3689999999865

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.22  E-value=0.00053  Score=60.12  Aligned_cols=73  Identities=18%  Similarity=0.278  Sum_probs=55.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +.+|+++|+|+ ||+|++++..|++.|+ +|++..|+.++.+++++++.. . .   +....  ..+..   .       
T Consensus       118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~-~---~~~~~--~~~l~---~-------  179 (272)
T 3pwz_A          118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-S-R---LRISR--YEALE---G-------  179 (272)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-T-T---EEEEC--SGGGT---T-------
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-C-C---eeEee--HHHhc---c-------
Confidence            56899999998 7999999999999996 999999999888888877654 1 1   33332  22211   0       


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                        ...|+|||+...
T Consensus       180 --~~~DivInaTp~  191 (272)
T 3pwz_A          180 --QSFDIVVNATSA  191 (272)
T ss_dssp             --CCCSEEEECSSG
T ss_pred             --cCCCEEEECCCC
Confidence              368999998754

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.16  E-value=0.00061  Score=56.87  Aligned_cols=42  Identities=19%  Similarity=0.303  Sum_probs=36.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK   49 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~   49 (298)
                      +++|+||+|.+|.+++..|+++|++|++.+|++++.+...+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            588999999999999999999999999999998776655443

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.12  E-value=0.0033  Score=55.53  Aligned_cols=91  Identities=20%  Similarity=0.265  Sum_probs=64.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc------------------hhhHHHHHHHHhcCCCCcceeEE
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE------------------KRGLEAVEKLKASGVDPELLLFH   63 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~------------------~~~~~~~~~~~~~~~~~~~~~~~   63 (298)
                      .+.+++|+|.|+ ||+|.++++.|+..|. ++.+++.+.                  .+.+...+.++...... .+..+
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v-~v~~~  110 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDV-LFEVH  110 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTS-EEEEE
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCc-EEEEe
Confidence            356789999988 8999999999999996 788888765                  45566666666554332 36666


Q ss_pred             EeccCcHHHHHHHHHHHHHh----cCCccEEEEccc
Q 022357           64 QLDISDLASVSSLADFIKTQ----FGKLDILANNAG   95 (298)
Q Consensus        64 ~~Dls~~~~v~~~~~~~~~~----~g~id~lv~nAg   95 (298)
                      ..++++.+.+..+++.+...    ....|+||.+..
T Consensus       111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            77787767776666543221    136899887764

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.11  E-value=0.0011  Score=60.55  Aligned_cols=76  Identities=18%  Similarity=0.280  Sum_probs=50.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|+||+|+||..++..+...|++|+++++ +++.+ .+   ++.+.+    .  .+|.++.+-.    +.+.+ .
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~-~~---~~lGa~----~--v~~~~~~~~~----~~~~~-~  246 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASE-LV---RKLGAD----D--VIDYKSGSVE----EQLKS-L  246 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHH-HH---HHTTCS----E--EEETTSSCHH----HHHHT-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHH-HH---HHcCCC----E--EEECCchHHH----HHHhh-c
Confidence            4789999999999999998888888999998884 44432 22   233322    1  2344443322    22222 2


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|++|.++|.
T Consensus       247 ~g~D~vid~~g~  258 (375)
T 2vn8_A          247 KPFDFILDNVGG  258 (375)
T ss_dssp             CCBSEEEESSCT
T ss_pred             CCCCEEEECCCC
Confidence            579999999985

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.08  E-value=0.0019  Score=59.82  Aligned_cols=74  Identities=16%  Similarity=0.290  Sum_probs=54.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+.+++++|.|+ |++|+.+++.|...|+ +|++++|+.++..+..+++.        ...  .+.   +++.+.+.   
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g--------~~~--~~~---~~l~~~l~---  226 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG--------GEA--VRF---DELVDHLA---  226 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT--------CEE--CCG---GGHHHHHH---
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC--------Cce--ecH---HhHHHHhc---
Confidence            367899999998 9999999999999999 89999999877656555542        111  222   23333332   


Q ss_pred             HhcCCccEEEEccccC
Q 022357           82 TQFGKLDILANNAGIA   97 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~   97 (298)
                          ..|+||++.+..
T Consensus       227 ----~aDvVi~at~~~  238 (404)
T 1gpj_A          227 ----RSDVVVSATAAP  238 (404)
T ss_dssp             ----TCSEEEECCSSS
T ss_pred             ----CCCEEEEccCCC
Confidence                689999998643

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.07  E-value=0.0021  Score=58.20  Aligned_cols=86  Identities=14%  Similarity=0.066  Sum_probs=52.4

Q ss_pred             CC-cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH--HHHHHHHHHHH
Q 022357            5 TK-KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL--ASVSSLADFIK   81 (298)
Q Consensus         5 ~~-~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~--~~v~~~~~~~~   81 (298)
                      .+ .++||+||+|++|..++..+...|++|++++++.++..+..+.+++.+.+    .++  |..+.  +++.+.+.++.
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~----~vi--~~~~~~~~~~~~~i~~~t  239 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT----QVI--TEDQNNSREFGPTIKEWI  239 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS----EEE--EHHHHHCGGGHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe----EEE--ecCccchHHHHHHHHHHh
Confidence            46 89999999999999888776668999999988766533333333333432    122  22221  12222222222


Q ss_pred             H-hcCCccEEEEcccc
Q 022357           82 T-QFGKLDILANNAGI   96 (298)
Q Consensus        82 ~-~~g~id~lv~nAg~   96 (298)
                      . .-+.+|++|.++|.
T Consensus       240 ~~~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          240 KQSGGEAKLALNCVGG  255 (364)
T ss_dssp             HHHTCCEEEEEESSCH
T ss_pred             hccCCCceEEEECCCc
Confidence            0 12379999999984

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.05  E-value=0.00093  Score=60.31  Aligned_cols=77  Identities=19%  Similarity=0.305  Sum_probs=52.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+++|+|+ |+||..+++.+...|+ +|+++++++++.+.. .++   +.+    .  ..|..+.+ +.   +.+.+.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~-~~~---Ga~----~--~~~~~~~~-~~---~~v~~~  231 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA-KKV---GAD----Y--VINPFEED-VV---KEVMDI  231 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH-HHH---TCS----E--EECTTTSC-HH---HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCC----E--EECCCCcC-HH---HHHHHH
Confidence            5789999999 9999999998888999 999999987654433 222   221    1  23444432 22   223222


Q ss_pred             c-C-CccEEEEcccc
Q 022357           84 F-G-KLDILANNAGI   96 (298)
Q Consensus        84 ~-g-~id~lv~nAg~   96 (298)
                      . + .+|++|.++|.
T Consensus       232 ~~g~g~D~vid~~g~  246 (348)
T 2d8a_A          232 TDGNGVDVFLEFSGA  246 (348)
T ss_dssp             TTTSCEEEEEECSCC
T ss_pred             cCCCCCCEEEECCCC
Confidence            2 2 69999999984

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.04  E-value=0.0016  Score=59.19  Aligned_cols=78  Identities=17%  Similarity=0.158  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.++||+| +|+||..++..+...|++|+++++++++++.. .+   .+.+    .  ..| .+.+++.+.+.++... 
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~---lGa~----~--vi~-~~~~~~~~~v~~~~~g-  255 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FA---LGAD----H--GIN-RLEEDWVERVYALTGD-  255 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HH---HTCS----E--EEE-TTTSCHHHHHHHHHTT-
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HH---cCCC----E--EEc-CCcccHHHHHHHHhCC-
Confidence            478999999 89999999888888899999999987765442 22   2322    1  234 3333333333333221 


Q ss_pred             CCccEEEEccc
Q 022357           85 GKLDILANNAG   95 (298)
Q Consensus        85 g~id~lv~nAg   95 (298)
                      ..+|++|.++|
T Consensus       256 ~g~D~vid~~g  266 (363)
T 3uog_A          256 RGADHILEIAG  266 (363)
T ss_dssp             CCEEEEEEETT
T ss_pred             CCceEEEECCC
Confidence            26999999998

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.03  E-value=0.0057  Score=54.89  Aligned_cols=78  Identities=10%  Similarity=0.105  Sum_probs=55.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .++++.|+|+ |.+|.+++..|+..|.  +|++.++++++++.....+.....-...+....-   +.+           
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~~~-----------   72 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---EYS-----------   72 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---CGG-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---cHH-----------
Confidence            4578999997 9999999999999887  8999999988887777777643210001222221   111           


Q ss_pred             hcCCccEEEEccccC
Q 022357           83 QFGKLDILANNAGIA   97 (298)
Q Consensus        83 ~~g~id~lv~nAg~~   97 (298)
                      .+...|++|+.||..
T Consensus        73 a~~~aDiVvi~ag~~   87 (326)
T 3vku_A           73 DAKDADLVVITAGAP   87 (326)
T ss_dssp             GGTTCSEEEECCCCC
T ss_pred             HhcCCCEEEECCCCC
Confidence            123679999999974

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.97  E-value=0.00059  Score=61.05  Aligned_cols=75  Identities=20%  Similarity=0.189  Sum_probs=48.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +++|+||+|+||..+++.+...|++|+++++++++.+.. +   +.+.+    ..  +|.++.+  ...++.+.  .+.+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~---~lGa~----~~--i~~~~~~--~~~~~~~~--~~~~  217 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-R---VLGAK----EV--LAREDVM--AERIRPLD--KQRW  217 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-H---HTTCS----EE--EECC-----------CC--SCCE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-H---HcCCc----EE--EecCCcH--HHHHHHhc--CCcc
Confidence            799999999999999988888899999999987765443 2   23322    12  3444432  12222221  1369


Q ss_pred             cEEEEcccc
Q 022357           88 DILANNAGI   96 (298)
Q Consensus        88 d~lv~nAg~   96 (298)
                      |++|.++|.
T Consensus       218 d~vid~~g~  226 (328)
T 1xa0_A          218 AAAVDPVGG  226 (328)
T ss_dssp             EEEEECSTT
T ss_pred             cEEEECCcH
Confidence            999999984

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=96.97  E-value=0.003  Score=57.27  Aligned_cols=81  Identities=19%  Similarity=0.235  Sum_probs=54.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~-Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .|.++||+|+ |++|...+..+...|++ |+++++++++.+.. .++ .  ..   +..+..|-.+.+++.+.   +.+.
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-~--~~---~~~~~~~~~~~~~~~~~---v~~~  247 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFA-KEI-C--PE---VVTHKVERLSAEESAKK---IVES  247 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH-HHH-C--TT---CEEEECCSCCHHHHHHH---HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-c--hh---cccccccccchHHHHHH---HHHH
Confidence            4789999998 99999988777778997 88999887765443 333 2  11   33444454444444433   3333


Q ss_pred             c--CCccEEEEcccc
Q 022357           84 F--GKLDILANNAGI   96 (298)
Q Consensus        84 ~--g~id~lv~nAg~   96 (298)
                      .  ..+|++|.+.|.
T Consensus       248 t~g~g~Dvvid~~g~  262 (363)
T 3m6i_A          248 FGGIEPAVALECTGV  262 (363)
T ss_dssp             TSSCCCSEEEECSCC
T ss_pred             hCCCCCCEEEECCCC
Confidence            3  269999999984

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.96  E-value=0.00034  Score=61.46  Aligned_cols=42  Identities=17%  Similarity=0.138  Sum_probs=36.8

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEA   46 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~   46 (298)
                      +.+|+++|+|+ ||.|++++..|++.|+ +|++..|+.++.+++
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            56889999997 8999999999999999 899999998765443

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.96  E-value=0.0082  Score=53.85  Aligned_cols=78  Identities=17%  Similarity=0.184  Sum_probs=54.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCC-CcceeEEEeccCcHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVD-PELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..+++.|+|+ |.+|.+++..|+..|.  +|++.++++++++..+..+.....- ...+.....|   .+          
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~----------   69 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE----------   69 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH----------
Confidence            4567999996 9999999999999987  8999999988877777667653110 0113332222   11          


Q ss_pred             HhcCCccEEEEccccC
Q 022357           82 TQFGKLDILANNAGIA   97 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~   97 (298)
                       .+...|++|..+|..
T Consensus        70 -a~~~aDvVvi~ag~p   84 (326)
T 3pqe_A           70 -DCKDADIVCICAGAN   84 (326)
T ss_dssp             -GGTTCSEEEECCSCC
T ss_pred             -HhCCCCEEEEecccC
Confidence             123679999999974

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.87  E-value=0.0028  Score=57.18  Aligned_cols=81  Identities=26%  Similarity=0.261  Sum_probs=51.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCc-HHHHHHHHHHHHH-
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIKT-   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~v~~~~~~~~~-   82 (298)
                      .+.++||+|+ |+||..++..+...|++|+++++++++++..    ++.+.+    .  ..|.++ .+..+++.+.... 
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~----~--~~~~~~~~~~~~~i~~~~~~~  236 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA----KNCGAD----V--TLVVDPAKEEESSIIERIRSA  236 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCS----E--EEECCTTTSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH----HHhCCC----E--EEcCcccccHHHHHHHHhccc
Confidence            4789999997 9999999887777899999999887664432    233322    1  234443 3323333222110 


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                      .-..+|++|.++|.
T Consensus       237 ~g~g~D~vid~~g~  250 (352)
T 1e3j_A          237 IGDLPNVTIDCSGN  250 (352)
T ss_dssp             SSSCCSEEEECSCC
T ss_pred             cCCCCCEEEECCCC
Confidence            01369999999984

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.86  E-value=0.0032  Score=57.32  Aligned_cols=79  Identities=16%  Similarity=0.201  Sum_probs=53.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH-HHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~   82 (298)
                      .+.++||+|+ |+||..++..+...|+ +|+++++++++++.. +   +.+.+    .  .+|.++. +++.+.+.++..
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~---~lGa~----~--vi~~~~~~~~~~~~~~~~~~  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA-K---VFGAT----D--FVNPNDHSEPISQVLSKMTN  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-H---HTTCC----E--EECGGGCSSCHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-H---HhCCc----e--EEeccccchhHHHHHHHHhC
Confidence            4689999996 9999999887777899 899999988765543 2   23322    1  2344431 234444443332


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                        +.+|++|.++|.
T Consensus       261 --~g~D~vid~~g~  272 (374)
T 1cdo_A          261 --GGVDFSLECVGN  272 (374)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              479999999984

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.85  E-value=0.0028  Score=56.91  Aligned_cols=77  Identities=18%  Similarity=0.267  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.++||+|+ |+||...++.+...|++|+++++++++.+..    ++.+.+    .  ..|..+.+..+.+.    +..
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~----~--~i~~~~~~~~~~~~----~~~  230 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA----RRLGAE----V--AVNARDTDPAAWLQ----KEI  230 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCS----E--EEETTTSCHHHHHH----HHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----HHcCCC----E--EEeCCCcCHHHHHH----HhC
Confidence            5789999997 8999999888878899999999987765432    333322    1  23444433323222    233


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|.+|.++|.
T Consensus       231 g~~d~vid~~g~  242 (340)
T 3s2e_A          231 GGAHGVLVTAVS  242 (340)
T ss_dssp             SSEEEEEESSCC
T ss_pred             CCCCEEEEeCCC
Confidence            689999999874

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.77  E-value=0.002  Score=58.41  Aligned_cols=75  Identities=17%  Similarity=0.236  Sum_probs=51.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.++||+|+ |+||..+++.+...|++|+++++++++.+... ++   +.+    .+  .|..+..++   .+.+.   
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~----~v--~~~~~~~~~---~~~~~---  241 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM---GAD----HY--IATLEEGDW---GEKYF---  241 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH---TCS----EE--EEGGGTSCH---HHHSC---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-Hc---CCC----EE--EcCcCchHH---HHHhh---
Confidence            4789999999 99999988877778999999999887755432 22   221    12  344333111   12221   


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|++|.++|.
T Consensus       242 ~~~D~vid~~g~  253 (360)
T 1piw_A          242 DTFDLIVVCASS  253 (360)
T ss_dssp             SCEEEEEECCSC
T ss_pred             cCCCEEEECCCC
Confidence            579999999986

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.75  E-value=0.0035  Score=57.08  Aligned_cols=79  Identities=14%  Similarity=0.206  Sum_probs=52.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCc-HHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~v~~~~~~~~~   82 (298)
                      .+.++||+|+ |+||..+++.+...|+ +|+++++++++.+.. +   +.+.+    .  .+|.++ .+++.+.+.++..
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~---~lGa~----~--vi~~~~~~~~~~~~~~~~~~  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-K---EVGAT----E--CVNPQDYKKPIQEVLTEMSN  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-H---HTTCS----E--EECGGGCSSCHHHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-H---HhCCc----e--EecccccchhHHHHHHHHhC
Confidence            4689999995 9999999888878899 899999988765443 2   23322    1  234443 1233333333322


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                        +.+|++|.++|.
T Consensus       260 --~g~D~vid~~g~  271 (374)
T 2jhf_A          260 --GGVDFSFEVIGR  271 (374)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCcEEEECCCC
Confidence              479999999984

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.74  E-value=0.0015  Score=55.44  Aligned_cols=72  Identities=17%  Similarity=0.211  Sum_probs=54.5

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .+.++|.|+ |.+|+.+++.|.++|+ |++++++++..+..    . .+     +.++..|.++.+.++++-      ..
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~----~-~~-----~~~i~gd~~~~~~l~~a~------i~   70 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVL----R-SG-----ANFVHGDPTRVSDLEKAN------VR   70 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHH----H-TT-----CEEEESCTTCHHHHHHTT------CT
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHH----h-cC-----CeEEEcCCCCHHHHHhcC------cc
Confidence            467999998 8999999999999999 99999987754433    2 11     678889999887665541      23


Q ss_pred             CccEEEEccc
Q 022357           86 KLDILANNAG   95 (298)
Q Consensus        86 ~id~lv~nAg   95 (298)
                      ..|.+|.+.+
T Consensus        71 ~ad~vi~~~~   80 (234)
T 2aef_A           71 GARAVIVDLE   80 (234)
T ss_dssp             TCSEEEECCS
T ss_pred             hhcEEEEcCC
Confidence            6788888764

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.73  E-value=0.0042  Score=56.59  Aligned_cols=74  Identities=20%  Similarity=0.258  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.++||+|+ |+||..++..+...|++|+++++++++.+... ++   +.+    .  .+|..+.+.+++    +.   
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l---Ga~----~--vi~~~~~~~~~~----~~---  255 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL---GAD----E--VVNSRNADEMAA----HL---  255 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCS----E--EEETTCHHHHHT----TT---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCc----E--EeccccHHHHHH----hh---
Confidence            4689999998 89999998877778999999999887755433 22   321    1  235555433222    21   


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|++|.++|.
T Consensus       256 ~g~Dvvid~~g~  267 (369)
T 1uuf_A          256 KSFDFILNTVAA  267 (369)
T ss_dssp             TCEEEEEECCSS
T ss_pred             cCCCEEEECCCC
Confidence            479999999985

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.69  E-value=0.0042  Score=56.48  Aligned_cols=79  Identities=14%  Similarity=0.211  Sum_probs=52.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH-HHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~   82 (298)
                      .+.++||+|+ |+||..++..+...|+ +|+++++++++.+.. +++   +.+    .  ..|.++. +++.+.+.++..
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~----~--vi~~~~~~~~~~~~v~~~~~  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEF---GAT----E--CINPQDFSKPIQEVLIEMTD  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHH---TCS----E--EECGGGCSSCHHHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCc----e--EeccccccccHHHHHHHHhC
Confidence            4689999996 9999998887777899 799999988765443 232   221    1  2344431 233333333322


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                        +.+|++|.++|.
T Consensus       259 --~g~D~vid~~g~  270 (373)
T 2fzw_A          259 --GGVDYSFECIGN  270 (373)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCCEEEECCCc
Confidence              479999999984

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.68  E-value=0.02  Score=51.49  Aligned_cols=79  Identities=13%  Similarity=0.113  Sum_probs=55.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcC-CCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASG-VDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..+++.|+|+ |.+|.+++..|+.+|.  +|++.++++++++..+..+.... ... .......  .+.++         
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~-~~~i~~~--~d~~~---------   84 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLK-TPKIVSS--KDYSV---------   84 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCS-CCEEEEC--SSGGG---------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccC-CCeEEEc--CCHHH---------
Confidence            4568999998 9999999999999987  89999999888888777777531 110 0112211  12211         


Q ss_pred             HhcCCccEEEEccccCC
Q 022357           82 TQFGKLDILANNAGIAS   98 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~   98 (298)
                        +...|++|..||...
T Consensus        85 --~~~aDiVvi~aG~~~   99 (331)
T 4aj2_A           85 --TANSKLVIITAGARQ   99 (331)
T ss_dssp             --GTTEEEEEECCSCCC
T ss_pred             --hCCCCEEEEccCCCC
Confidence              236799999999753

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.68  E-value=0.0065  Score=55.50  Aligned_cols=78  Identities=24%  Similarity=0.241  Sum_probs=51.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccC--cHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS--DLASVSSLADFIK   81 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls--~~~~v~~~~~~~~   81 (298)
                      .+.++||+| +|++|..+++.+...| ++|+++++++++.+..    ++.+.+    .+  +|..  +.+++.   +.+.
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~----~~lGa~----~v--i~~~~~~~~~~~---~~v~  260 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA----EEIGAD----LT--LNRRETSVEERR---KAIM  260 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH----HHTTCS----EE--EETTTSCHHHHH---HHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH----HHcCCc----EE--EeccccCcchHH---HHHH
Confidence            478999999 8999999988777789 5999999987664433    233322    22  2333  133333   3333


Q ss_pred             Hhc-C-CccEEEEcccc
Q 022357           82 TQF-G-KLDILANNAGI   96 (298)
Q Consensus        82 ~~~-g-~id~lv~nAg~   96 (298)
                      +.. + .+|++|.++|.
T Consensus       261 ~~~~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          261 DITHGRGADFILEATGD  277 (380)
T ss_dssp             HHTTTSCEEEEEECSSC
T ss_pred             HHhCCCCCcEEEECCCC
Confidence            333 2 69999999984

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.67  E-value=0.0051  Score=56.03  Aligned_cols=79  Identities=18%  Similarity=0.215  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH-HHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~   82 (298)
                      .+.+|||+|+ |+||..++..+...|+ +|+++++++++++.. .   +.+.+    .  .+|.++. +++.+.+.++..
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~---~lGa~----~--vi~~~~~~~~~~~~v~~~~~  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-K---ALGAT----D--CLNPRELDKPVQDVITELTA  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-H---HTTCS----E--EECGGGCSSCHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-H---HhCCc----E--EEccccccchHHHHHHHHhC
Confidence            4689999996 9999999887777899 899999988765443 2   23322    1  2344431 233333333322


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                        +.+|++|.++|.
T Consensus       264 --~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 --GGVDYSLDCAGT  275 (376)
T ss_dssp             --SCBSEEEESSCC
T ss_pred             --CCccEEEECCCC
Confidence              479999999984

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.65  E-value=0.0044  Score=56.13  Aligned_cols=77  Identities=19%  Similarity=0.223  Sum_probs=51.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+|||+|+ |++|..++..+... |++|+++++++++.+..    ++.+.+    .+  .|.++.  +.+.+.++.. 
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~----~~lGa~----~v--i~~~~~--~~~~v~~~~~-  251 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA----ERLGAD----HV--VDARRD--PVKQVMELTR-  251 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH----HHTTCS----EE--EETTSC--HHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH----HHhCCC----EE--Eeccch--HHHHHHHHhC-
Confidence            4689999999 89999988877778 99999999987654433    233322    12  344443  3333332211 


Q ss_pred             cC-CccEEEEcccc
Q 022357           84 FG-KLDILANNAGI   96 (298)
Q Consensus        84 ~g-~id~lv~nAg~   96 (298)
                       + .+|++|.++|.
T Consensus       252 -g~g~Dvvid~~G~  264 (359)
T 1h2b_A          252 -GRGVNVAMDFVGS  264 (359)
T ss_dssp             -TCCEEEEEESSCC
T ss_pred             -CCCCcEEEECCCC
Confidence             3 69999999985

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.63  E-value=0.0036  Score=56.84  Aligned_cols=77  Identities=18%  Similarity=0.193  Sum_probs=50.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHH-CCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLAS-KGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~-~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.++||+||+|++|...+..+.. .|++|+++++++++.+..    ++.+.+    .+  .|.++  ++   .+.+.+.
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~----~~lGad----~v--i~~~~--~~---~~~v~~~  235 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV----KSLGAH----HV--IDHSK--PL---AAEVAAL  235 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH----HHTTCS----EE--ECTTS--CH---HHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH----HHcCCC----EE--EeCCC--CH---HHHHHHh
Confidence            478999999999999887765544 489999999987664433    233332    12  23332  22   2333332


Q ss_pred             c-CCccEEEEcccc
Q 022357           84 F-GKLDILANNAGI   96 (298)
Q Consensus        84 ~-g~id~lv~nAg~   96 (298)
                      . +.+|++|.++|.
T Consensus       236 ~~~g~Dvvid~~g~  249 (363)
T 4dvj_A          236 GLGAPAFVFSTTHT  249 (363)
T ss_dssp             CSCCEEEEEECSCH
T ss_pred             cCCCceEEEECCCc
Confidence            2 379999999884

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.62  E-value=0.0095  Score=53.80  Aligned_cols=79  Identities=25%  Similarity=0.257  Sum_probs=50.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccC--cHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS--DLASVSSLADFIK   81 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls--~~~~v~~~~~~~~   81 (298)
                      .+.++||+|+ |+||..++..+...|+ +|+++++++++.+..    ++.+.+    ..  +|..  +.++..+.+.+..
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~----~v--i~~~~~~~~~~~~~i~~~~  239 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA----KEIGAD----LV--LQISKESPQEIARKVEGQL  239 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCS----EE--EECSSCCHHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHhCCC----EE--EcCcccccchHHHHHHHHh
Confidence            4789999996 9999998887777899 899999887654432    233322    12  3444  2222222222222


Q ss_pred             HhcCCccEEEEcccc
Q 022357           82 TQFGKLDILANNAGI   96 (298)
Q Consensus        82 ~~~g~id~lv~nAg~   96 (298)
                      .  ..+|++|.++|.
T Consensus       240 ~--~g~D~vid~~g~  252 (356)
T 1pl8_A          240 G--CKPEVTIECTGA  252 (356)
T ss_dssp             T--SCCSEEEECSCC
T ss_pred             C--CCCCEEEECCCC
Confidence            1  479999999984

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.62  E-value=0.02  Score=51.02  Aligned_cols=46  Identities=26%  Similarity=0.186  Sum_probs=36.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC--chhhHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD--EKRGLEAVEKLK   51 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~--~~~~~~~~~~~~   51 (298)
                      +.+++.|.|+ |.+|..++..|+..|. +|++.+++  ++..+....++.
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~   55 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDML   55 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHH
Confidence            4578999997 9999999999999999 99999999  445544444443

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.61  E-value=0.0078  Score=51.88  Aligned_cols=82  Identities=18%  Similarity=0.287  Sum_probs=55.5

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhhHHHHHHHHhcCCCCcceeEE
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLFH   63 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   63 (298)
                      +.+++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+..++.++...... .+..+
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~-~v~~~  103 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDI-QLTAL  103 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTS-EEEEE
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCC-EEEEE
Confidence            45789999998 7899999999999997 678876542                   45566666776543331 24444


Q ss_pred             EeccCcHHHHHHHHHHHHHhcCCccEEEEccc
Q 022357           64 QLDISDLASVSSLADFIKTQFGKLDILANNAG   95 (298)
Q Consensus        64 ~~Dls~~~~v~~~~~~~~~~~g~id~lv~nAg   95 (298)
                      ..+++. +++..+++       ..|+||.+..
T Consensus       104 ~~~~~~-~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          104 QQRLTG-EALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             CSCCCH-HHHHHHHH-------HCSEEEECCS
T ss_pred             eccCCH-HHHHHHHh-------cCCEEEECCC
Confidence            444543 34444443       4799998864

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.59  E-value=0.0043  Score=55.83  Aligned_cols=77  Identities=23%  Similarity=0.248  Sum_probs=50.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~--G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.++||+|+ |+||..+++.+...  |++|+++++++++.+.. ++   .+.+    .+  .|..+.   ...++++..
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~-~~---lGa~----~v--i~~~~~---~~~~~~~~~  235 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA-LE---LGAD----YV--SEMKDA---ESLINKLTD  235 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH-HH---HTCS----EE--ECHHHH---HHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH-HH---hCCC----EE--eccccc---hHHHHHhhc
Confidence            5789999999 99999998877778  99999999987765433 22   2322    11  233320   122333322


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                       -..+|++|.++|.
T Consensus       236 -g~g~D~vid~~g~  248 (344)
T 2h6e_A          236 -GLGASIAIDLVGT  248 (344)
T ss_dssp             -TCCEEEEEESSCC
T ss_pred             -CCCccEEEECCCC
Confidence             1269999999984

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.59  E-value=0.008  Score=54.71  Aligned_cols=78  Identities=17%  Similarity=0.162  Sum_probs=51.5

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ..+.+++|+||+|++|...+..+...|++|+.+. ++++.+ .+   ++.+.+    .+  .|..+.+ +.   +.+.+.
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~---~~lGa~----~v--i~~~~~~-~~---~~v~~~  227 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LA---KSRGAE----EV--FDYRAPN-LA---QTIRTY  227 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HH---HHTTCS----EE--EETTSTT-HH---HHHHHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HH---HHcCCc----EE--EECCCch-HH---HHHHHH
Confidence            4578999999999999999888888899999886 454433 33   233322    22  3444433 22   223332


Q ss_pred             c-CCccEEEEcccc
Q 022357           84 F-GKLDILANNAGI   96 (298)
Q Consensus        84 ~-g~id~lv~nAg~   96 (298)
                      . +++|++|.+.|.
T Consensus       228 t~g~~d~v~d~~g~  241 (371)
T 3gqv_A          228 TKNNLRYALDCITN  241 (371)
T ss_dssp             TTTCCCEEEESSCS
T ss_pred             ccCCccEEEECCCc
Confidence            2 469999999985

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.58  E-value=0.0036  Score=57.23  Aligned_cols=81  Identities=16%  Similarity=0.105  Sum_probs=52.4

Q ss_pred             CCcEEEEeC-CCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTG-SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITG-as~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.++||.| |+|++|...+..+...|++|+++++++++.+..    ++.+.+    .+  .|..+.+-.+.+ .++...
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~----~~lGa~----~~--~~~~~~~~~~~v-~~~t~~  238 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLL----KAQGAV----HV--CNAASPTFMQDL-TEALVS  238 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHH----HHTTCS----CE--EETTSTTHHHHH-HHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HhCCCc----EE--EeCCChHHHHHH-HHHhcC
Confidence            467889987 999999998887777899999999987664433    233332    12  344443322222 222211


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                       ..+|++|.+.|..
T Consensus       239 -~g~d~v~d~~g~~  251 (379)
T 3iup_A          239 -TGATIAFDATGGG  251 (379)
T ss_dssp             -HCCCEEEESCEEE
T ss_pred             -CCceEEEECCCch
Confidence             1699999999853

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.57  E-value=0.002  Score=58.02  Aligned_cols=77  Identities=13%  Similarity=0.155  Sum_probs=51.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+++|+|+ |++|..+++.+...|+ +|+++++++++.+.. .++    .    -.  ..|..+. ++.+.+.++.  
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~-~~l----a----~~--v~~~~~~-~~~~~~~~~~--  228 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFA-RPY----A----DR--LVNPLEE-DLLEVVRRVT--  228 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGG-TTT----C----SE--EECTTTS-CHHHHHHHHH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh----H----Hh--ccCcCcc-CHHHHHHHhc--
Confidence            5789999999 9999999988878899 899999987653322 111    1    11  2344442 3333333332  


Q ss_pred             cCCccEEEEcccc
Q 022357           84 FGKLDILANNAGI   96 (298)
Q Consensus        84 ~g~id~lv~nAg~   96 (298)
                      -..+|++|.++|.
T Consensus       229 ~~g~D~vid~~g~  241 (343)
T 2dq4_A          229 GSGVEVLLEFSGN  241 (343)
T ss_dssp             SSCEEEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2369999999984

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.56  E-value=0.0028  Score=57.34  Aligned_cols=84  Identities=17%  Similarity=0.211  Sum_probs=50.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+|||+||+|++|...+.-+...|++|+++.+..++..+..+..++.+.+    .++  |..+. ..+. +.++....
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~----~vi--~~~~~-~~~~-~~~~~~~~  238 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAE----HVI--TEEEL-RRPE-MKNFFKDM  238 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCS----EEE--EHHHH-HSGG-GGGTTSSS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCc----EEE--ecCcc-hHHH-HHHHHhCC
Confidence            4789999999999999888766667999988886654433333444444432    122  21111 0011 11111112


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|++|.+.|.
T Consensus       239 ~~~Dvvid~~g~  250 (357)
T 1zsy_A          239 PQPRLALNCVGG  250 (357)
T ss_dssp             CCCSEEEESSCH
T ss_pred             CCceEEEECCCc
Confidence            258999999884

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.51  E-value=0.002  Score=56.69  Aligned_cols=44  Identities=18%  Similarity=0.228  Sum_probs=38.0

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVE   48 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~   48 (298)
                      +.+++++|.|+ ||.|++++..|++.|+ +|++..|+.++.+++++
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            56899999998 7999999999999998 89999999877655543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.49  E-value=0.0041  Score=54.25  Aligned_cols=43  Identities=19%  Similarity=0.202  Sum_probs=39.0

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL   50 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~   50 (298)
                      +|+++|.|+ ||.|++++..|++.|.+|.+..|+.++.+++. ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            689999997 99999999999999999999999998887776 54

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.46  E-value=0.0085  Score=54.78  Aligned_cols=42  Identities=12%  Similarity=0.045  Sum_probs=37.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV   47 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~   47 (298)
                      .+++++|.|+ |.+|..+++.+...|++|++.+|+..+++...
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  224 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR  224 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            5689999999 89999999999999999999999987765543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.45  E-value=0.007  Score=55.75  Aligned_cols=77  Identities=23%  Similarity=0.341  Sum_probs=51.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+|||+|+ |++|...+.-+...|+ +|+++++++++++.. .++   +.+    .+  .|..+.+-    .+.+.+.
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~----~v--i~~~~~~~----~~~i~~~  277 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL---GAD----HV--IDPTKENF----VEAVLDY  277 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH---TCS----EE--ECTTTSCH----HHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCC----EE--EcCCCCCH----HHHHHHH
Confidence            4789999998 9999998877777899 899999887664432 332   322    12  34443332    2233333


Q ss_pred             c-C-CccEEEEcccc
Q 022357           84 F-G-KLDILANNAGI   96 (298)
Q Consensus        84 ~-g-~id~lv~nAg~   96 (298)
                      . + .+|++|.++|.
T Consensus       278 t~g~g~D~vid~~g~  292 (404)
T 3ip1_A          278 TNGLGAKLFLEATGV  292 (404)
T ss_dssp             TTTCCCSEEEECSSC
T ss_pred             hCCCCCCEEEECCCC
Confidence            3 2 69999999985

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.44  E-value=0.0036  Score=57.09  Aligned_cols=79  Identities=16%  Similarity=0.172  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCc-HHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~v~~~~~~~~~   82 (298)
                      .+.+|||+|+ |+||...+..+...|+ +|+++++++++++..    ++.+.+    .  ..|..+ .+++.+.+.++..
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a----~~lGa~----~--vi~~~~~~~~~~~~i~~~~~  261 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA----KKFGVN----E--FVNPKDHDKPIQEVIVDLTD  261 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH----HTTTCC----E--EECGGGCSSCHHHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCc----E--EEccccCchhHHHHHHHhcC
Confidence            4689999998 9999998887777899 799999888765532    233322    1  234442 2333333333322


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                        +.+|++|.++|.
T Consensus       262 --gg~D~vid~~g~  273 (378)
T 3uko_A          262 --GGVDYSFECIGN  273 (378)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              379999999984

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.42  E-value=0.0067  Score=55.17  Aligned_cols=79  Identities=18%  Similarity=0.214  Sum_probs=51.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH-HHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~   82 (298)
                      .+.+|||+|+ |+||..++..+...|+ +|+++++++++.+.. +   +.+.+    ..  .|..+. +++.+.+.++..
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~---~lGa~----~v--i~~~~~~~~~~~~i~~~t~  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-I---ELGAT----EC--LNPKDYDKPIYEVICEKTN  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-H---HTTCS----EE--ECGGGCSSCHHHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-H---HcCCc----EE--EecccccchHHHHHHHHhC
Confidence            4689999996 9999998877767799 899999888765443 2   23322    11  344331 233333333322


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                        +.+|++|.++|.
T Consensus       260 --gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 --GGVDYAVECAGR  271 (373)
T ss_dssp             --SCBSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              479999999984

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.41  E-value=0.0046  Score=56.34  Aligned_cols=80  Identities=23%  Similarity=0.248  Sum_probs=50.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.++||+|+ |++|...+..+...|+ +|+++++++++.+ .++++   +.+    .  ..|.++.+- .+.+.+....
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~l---Ga~----~--vi~~~~~~~-~~~i~~~~~~  249 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEV---GAT----A--TVDPSAGDV-VEAIAGPVGL  249 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHH---TCS----E--EECTTSSCH-HHHHHSTTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHc---CCC----E--EECCCCcCH-HHHHHhhhhc
Confidence            4789999998 9999998887777899 8888988876544 33332   322    1  234444332 2222211002


Q ss_pred             -cCCccEEEEcccc
Q 022357           84 -FGKLDILANNAGI   96 (298)
Q Consensus        84 -~g~id~lv~nAg~   96 (298)
                       .+.+|++|.++|.
T Consensus       250 ~~gg~Dvvid~~G~  263 (370)
T 4ej6_A          250 VPGGVDVVIECAGV  263 (370)
T ss_dssp             STTCEEEEEECSCC
T ss_pred             cCCCCCEEEECCCC
Confidence             2479999999884

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.38  E-value=0.024  Score=50.57  Aligned_cols=83  Identities=19%  Similarity=0.253  Sum_probs=53.4

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCC-CCcceeEEEeccCcHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      |..++..++.|+|+ |.+|..++..|+.+|.  +|++.+.++++++.....+..... ....+.+.. |  +.+.     
T Consensus         1 m~~m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~~a-----   71 (317)
T 3d0o_A            1 MNKFKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EYSD-----   71 (317)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CGGG-----
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CHHH-----
Confidence            55556678999999 9999999999999884  899999998776655555543210 001122222 1  1111     


Q ss_pred             HHHHHhcCCccEEEEccccCC
Q 022357           78 DFIKTQFGKLDILANNAGIAS   98 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~~   98 (298)
                            +...|++|..+|...
T Consensus        72 ------~~~aDvVvi~ag~~~   86 (317)
T 3d0o_A           72 ------CHDADLVVICAGAAQ   86 (317)
T ss_dssp             ------GTTCSEEEECCCCCC
T ss_pred             ------hCCCCEEEECCCCCC
Confidence                  236799999998753

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.35  E-value=0.0092  Score=55.10  Aligned_cols=42  Identities=14%  Similarity=0.104  Sum_probs=36.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~   46 (298)
                      +.+++++|+|+ |.+|+.+++.+...|++|++++++..+++..
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            45789999997 9999999999999999999999998766553

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.34  E-value=0.0028  Score=57.75  Aligned_cols=47  Identities=17%  Similarity=0.170  Sum_probs=41.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL   50 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~   50 (298)
                      ++.+|+++|.|. |.+|+.+|+.|.+.|++|++.+++.+++.+..+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            578999999997 88999999999999999999999887766666554

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.34  E-value=0.0043  Score=56.17  Aligned_cols=76  Identities=22%  Similarity=0.262  Sum_probs=51.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|+|+ |+||...+..+...|++|+++++++++.+...+   +.+.+    .+  .|..+.+.++       +..
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa~----~v--i~~~~~~~~~-------~~~  242 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGAD----DY--VIGSDQAKMS-------ELA  242 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCCS----CE--EETTCHHHHH-------HST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCCc----ee--eccccHHHHH-------Hhc
Confidence            5789999995 999999988777789999999998766444321   23322    11  2444433222       222


Q ss_pred             CCccEEEEccccC
Q 022357           85 GKLDILANNAGIA   97 (298)
Q Consensus        85 g~id~lv~nAg~~   97 (298)
                      +.+|++|.++|..
T Consensus       243 ~g~D~vid~~g~~  255 (357)
T 2cf5_A          243 DSLDYVIDTVPVH  255 (357)
T ss_dssp             TTEEEEEECCCSC
T ss_pred             CCCCEEEECCCCh
Confidence            4799999999853

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.34  E-value=0.017  Score=51.56  Aligned_cols=78  Identities=12%  Similarity=0.134  Sum_probs=48.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+++.|+|+ |.+|..++..|+..|.  +|++.+.++++++.....+.....-...+.+. .  .+.+           .
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~~-----------a   71 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDYS-----------D   71 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCHH-----------H
Confidence            357889998 9999999999999987  89999999877766566655422100012111 1  1111           1


Q ss_pred             cCCccEEEEccccCC
Q 022357           84 FGKLDILANNAGIAS   98 (298)
Q Consensus        84 ~g~id~lv~nAg~~~   98 (298)
                      +...|++|..+|...
T Consensus        72 ~~~aDvVii~~g~p~   86 (318)
T 1y6j_A           72 VKDCDVIVVTAGANR   86 (318)
T ss_dssp             GTTCSEEEECCCC--
T ss_pred             hCCCCEEEEcCCCCC
Confidence            236899999998753

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.32  E-value=0.0059  Score=54.32  Aligned_cols=74  Identities=16%  Similarity=0.243  Sum_probs=49.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|+||+|+||...+..+...|++|+++++.. + .+.+.   +.+.+    .  ..|..+.+.+.+.       .
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~-~~~~~---~lGa~----~--~i~~~~~~~~~~~-------~  213 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N-HAFLK---ALGAE----Q--CINYHEEDFLLAI-------S  213 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H-HHHHH---HHTCS----E--EEETTTSCHHHHC-------C
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h-HHHHH---HcCCC----E--EEeCCCcchhhhh-------c
Confidence            578999999999999999998888999999887543 2 22333   33322    1  2344443322221       2


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      ..+|+++.+.|.
T Consensus       214 ~g~D~v~d~~g~  225 (321)
T 3tqh_A          214 TPVDAVIDLVGG  225 (321)
T ss_dssp             SCEEEEEESSCH
T ss_pred             cCCCEEEECCCc
Confidence            479999999984

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.30  E-value=0.063  Score=50.13  Aligned_cols=81  Identities=20%  Similarity=0.147  Sum_probs=55.1

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +++.+|+++|.|. |+.|.++|+.|+++|++|.+.+++........+.++..+     +.+....-  .++   .++   
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~g-----i~~~~g~~--~~~---~~~---   70 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEG-----IKVVCGSH--PLE---LLD---   70 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTT-----CEEEESCC--CGG---GGG---
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCC-----CEEEECCC--hHH---hhc---
Confidence            4567899999999 889999999999999999999987643233445565544     33322211  111   111   


Q ss_pred             HhcCCccEEEEccccCCc
Q 022357           82 TQFGKLDILANNAGIASV   99 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~   99 (298)
                         +..|.||.+.|+...
T Consensus        71 ---~~~d~vv~spgi~~~   85 (451)
T 3lk7_A           71 ---EDFCYMIKNPGIPYN   85 (451)
T ss_dssp             ---SCEEEEEECTTSCTT
T ss_pred             ---CCCCEEEECCcCCCC
Confidence               138999999998654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.28  E-value=0.0096  Score=54.89  Aligned_cols=41  Identities=15%  Similarity=0.119  Sum_probs=36.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~   46 (298)
                      .+.+|+|.|+ |.+|..+++.+...|++|++.++++.+++..
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~  229 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQV  229 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            5678999999 8999999999999999999999998765544

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.28  E-value=0.0047  Score=55.38  Aligned_cols=47  Identities=19%  Similarity=0.091  Sum_probs=38.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKA   52 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~   52 (298)
                      +.+++.|+|+ |.+|.+++..|+..|. +|++.++++++++....++..
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~   53 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAE   53 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhc
Confidence            4567999998 9999999999999998 999999998876655555543

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.27  E-value=0.043  Score=49.20  Aligned_cols=78  Identities=15%  Similarity=0.103  Sum_probs=53.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEE-EeccCcHHHHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFH-QLDISDLASVSSLADFIKT   82 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++.|+|+ |.+|..++..|+.+|.  +|++.++++++++..+..+.....-....... ..|..+             
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-------------   86 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-------------   86 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-------------
Confidence            468999999 9999999999999987  89999999887777666665421000001111 222221             


Q ss_pred             hcCCccEEEEccccCC
Q 022357           83 QFGKLDILANNAGIAS   98 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~   98 (298)
                       +...|++|..||...
T Consensus        87 -~~daDiVIitaG~p~  101 (330)
T 3ldh_A           87 -SAGSKLVVITAGARQ  101 (330)
T ss_dssp             -CSSCSEEEECCSCCC
T ss_pred             -hCCCCEEEEeCCCCC
Confidence             236799999999753

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.26  E-value=0.0041  Score=55.05  Aligned_cols=43  Identities=12%  Similarity=0.017  Sum_probs=35.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLK   51 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~   51 (298)
                      ++.|+|+ |.+|.+++..|+..|.  +|++.++++++++....++.
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~   46 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLA   46 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHH
Confidence            5889999 9999999999999988  89999999887654444443

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.26  E-value=0.0084  Score=53.95  Aligned_cols=70  Identities=24%  Similarity=0.321  Sum_probs=49.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.++||+|+ |+||...+..+...|++|+++++++++.+..    ++.+.+    ..+    ++.+.+++         
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~----~v~----~~~~~~~~---------  233 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA----LSMGVK----HFY----TDPKQCKE---------  233 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH----HHTTCS----EEE----SSGGGCCS---------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----HhcCCC----eec----CCHHHHhc---------
Confidence            4789999997 9999998888777899999999998775533    223332    122    33333221         


Q ss_pred             CCccEEEEccccC
Q 022357           85 GKLDILANNAGIA   97 (298)
Q Consensus        85 g~id~lv~nAg~~   97 (298)
                       .+|++|.++|..
T Consensus       234 -~~D~vid~~g~~  245 (348)
T 3two_A          234 -ELDFIISTIPTH  245 (348)
T ss_dssp             -CEEEEEECCCSC
T ss_pred             -CCCEEEECCCcH
Confidence             799999999853

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.25  E-value=0.018  Score=51.78  Aligned_cols=62  Identities=16%  Similarity=0.101  Sum_probs=43.6

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhhHHHHHHHHhcCCCCcceeEE
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLFH   63 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   63 (298)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+...+.++...... .+..+
T Consensus        32 L~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v-~v~~~  109 (340)
T 3rui_A           32 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLM-DATGV  109 (340)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTC-EEEEE
T ss_pred             HhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCC-EEEEE
Confidence            45789999998 8999999999999997 688887643                   34556666666654331 24444


Q ss_pred             Eecc
Q 022357           64 QLDI   67 (298)
Q Consensus        64 ~~Dl   67 (298)
                      ..++
T Consensus       110 ~~~i  113 (340)
T 3rui_A          110 KLSI  113 (340)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            4443

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.25  E-value=0.0061  Score=52.68  Aligned_cols=40  Identities=20%  Similarity=0.298  Sum_probs=34.4

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLE   45 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~   45 (298)
                      +.+ +++|.|+ ||.|++++..|++.|+ +|++..|+.+++++
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~  147 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKA  147 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            356 8999997 9999999999999998 89999999766444

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.21  E-value=0.014  Score=52.83  Aligned_cols=81  Identities=15%  Similarity=0.096  Sum_probs=51.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecCch--hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVSS   75 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-------~Vii~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~   75 (298)
                      +.-+|.|+||+|+||..++..|+....       .+.+.+.++.  .++....++........ ......  ++.   ..
T Consensus        23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~-~~~~~~--~~~---~~   96 (345)
T 4h7p_A           23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLL-DKVVVT--ADP---RV   96 (345)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTE-EEEEEE--SCH---HH
T ss_pred             CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCC-CcEEEc--CCh---HH
Confidence            345899999999999999999997543       6888887653  34555556665322210 111111  121   22


Q ss_pred             HHHHHHHhcCCccEEEEccccCC
Q 022357           76 LADFIKTQFGKLDILANNAGIAS   98 (298)
Q Consensus        76 ~~~~~~~~~g~id~lv~nAg~~~   98 (298)
                      .       +...|++|..||...
T Consensus        97 a-------~~~advVvi~aG~pr  112 (345)
T 4h7p_A           97 A-------FDGVAIAIMCGAFPR  112 (345)
T ss_dssp             H-------TTTCSEEEECCCCCC
T ss_pred             H-------hCCCCEEEECCCCCC
Confidence            2       237899999999754

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.20  E-value=0.076  Score=46.25  Aligned_cols=42  Identities=19%  Similarity=0.120  Sum_probs=35.8

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK   49 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~   49 (298)
                      +++.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            56777776 8899999999999999999999998877666554

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.16  E-value=0.013  Score=52.61  Aligned_cols=77  Identities=17%  Similarity=0.006  Sum_probs=51.5

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhc---CCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKAS---GVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +++.|.|| |.+|.+++..|+..|+ .|++.+++++.++.....+...   .....++.+.    +|   .++.++    
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d---~~ea~~----   77 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YS---YEAALT----   77 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CS---HHHHHT----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CC---HHHHhC----
Confidence            57999998 9999999999999998 9999999987776644443321   1111112211    22   222222    


Q ss_pred             hcCCccEEEEccccCC
Q 022357           83 QFGKLDILANNAGIAS   98 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~   98 (298)
                         ..|++|..+|...
T Consensus        78 ---~aDiVi~a~g~p~   90 (331)
T 1pzg_A           78 ---GADCVIVTAGLTK   90 (331)
T ss_dssp             ---TCSEEEECCSCSS
T ss_pred             ---CCCEEEEccCCCC
Confidence               6799999998653

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.13  E-value=0.0091  Score=53.95  Aligned_cols=74  Identities=18%  Similarity=0.230  Sum_probs=48.5

Q ss_pred             CcEEEEeCCCCchhHHH-HHHH-HHCCCE-EEEEecCch---hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFET-VRQL-ASKGIT-VVLTARDEK---RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~-a~~L-a~~G~~-Vii~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      +.+|+|+|+ |+||... +.-+ ...|++ |++++++++   +.+.. .   +.+     ...+  |..+.+ +.+ +.+
T Consensus       173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~---~lG-----a~~v--~~~~~~-~~~-i~~  238 (357)
T 2b5w_A          173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-E---ELD-----ATYV--DSRQTP-VED-VPD  238 (357)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-H---HTT-----CEEE--ETTTSC-GGG-HHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-H---HcC-----Cccc--CCCccC-HHH-HHH
Confidence            389999999 9999988 6555 456997 999999876   54332 2   233     2222  444332 223 333


Q ss_pred             HHHhcCCccEEEEcccc
Q 022357           80 IKTQFGKLDILANNAGI   96 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~   96 (298)
                      +   .+.+|++|.++|.
T Consensus       239 ~---~gg~Dvvid~~g~  252 (357)
T 2b5w_A          239 V---YEQMDFIYEATGF  252 (357)
T ss_dssp             H---SCCEEEEEECSCC
T ss_pred             h---CCCCCEEEECCCC
Confidence            3   2479999999984

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.09  E-value=0.0091  Score=56.18  Aligned_cols=75  Identities=15%  Similarity=0.150  Sum_probs=57.7

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .++++|.|+ |-+|+.+|+.|.++|+.|++++++++.+..+.+.+.        +..+..|.++++.++++-      ..
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~--------~~~i~Gd~~~~~~L~~Ag------i~   67 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYD--------LRVVNGHASHPDVLHEAG------AQ   67 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSS--------CEEEESCTTCHHHHHHHT------TT
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcC--------cEEEEEcCCCHHHHHhcC------CC
Confidence            357888888 899999999999999999999999877655544331        677888999988776652      12


Q ss_pred             CccEEEEccc
Q 022357           86 KLDILANNAG   95 (298)
Q Consensus        86 ~id~lv~nAg   95 (298)
                      ..|++|...+
T Consensus        68 ~ad~~ia~t~   77 (461)
T 4g65_A           68 DADMLVAVTN   77 (461)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEEcC
Confidence            6788876554

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.09  E-value=0.0087  Score=53.92  Aligned_cols=77  Identities=12%  Similarity=0.061  Sum_probs=50.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+++|+|+ |+||...+..+...|+ +|+++++++++++. +.++   +.+    .  ..|.++.+-    .+.+.+.
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~-~~~l---Ga~----~--vi~~~~~~~----~~~v~~~  230 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDI-ALEY---GAT----D--IINYKNGDI----VEQILKA  230 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHH-HHHH---TCC----E--EECGGGSCH----HHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHH-HHHh---CCc----e--EEcCCCcCH----HHHHHHH
Confidence            4688999986 9999998877777899 79999988765432 2332   322    1  234433322    2333333


Q ss_pred             cC--CccEEEEcccc
Q 022357           84 FG--KLDILANNAGI   96 (298)
Q Consensus        84 ~g--~id~lv~nAg~   96 (298)
                      .+  .+|++|.++|.
T Consensus       231 t~g~g~D~v~d~~g~  245 (352)
T 3fpc_A          231 TDGKGVDKVVIAGGD  245 (352)
T ss_dssp             TTTCCEEEEEECSSC
T ss_pred             cCCCCCCEEEECCCC
Confidence            32  59999999885

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.07  E-value=0.0076  Score=53.94  Aligned_cols=46  Identities=20%  Similarity=0.103  Sum_probs=38.4

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHh
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKA   52 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~   52 (298)
                      .+++.|+|+ |.+|.+++..|+..|. +|++.++++++++....++..
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~   51 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQ   51 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHh
Confidence            467888895 9999999999999888 999999998877666666654

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.01  E-value=0.051  Score=48.46  Aligned_cols=79  Identities=15%  Similarity=0.185  Sum_probs=53.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +++++.|+|| |.+|..++..|+..+.  +|++.++++++++..+..+.....-...+.+.. |  +.++          
T Consensus         4 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~~a----------   69 (318)
T 1ez4_A            4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EYSD----------   69 (318)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CGGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CHHH----------
Confidence            3468999999 9999999999999876  899999998888777777764321001122222 1  1111          


Q ss_pred             hcCCccEEEEccccCC
Q 022357           83 QFGKLDILANNAGIAS   98 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~   98 (298)
                       +...|++|..+|...
T Consensus        70 -~~~aDvVii~ag~~~   84 (318)
T 1ez4_A           70 -CKDADLVVITAGAPQ   84 (318)
T ss_dssp             -GTTCSEEEECCCC--
T ss_pred             -hCCCCEEEECCCCCC
Confidence             236899999998753

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.98  E-value=0.099  Score=46.44  Aligned_cols=83  Identities=22%  Similarity=0.297  Sum_probs=55.6

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCC-CCcceeEEEeccCcHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      |.+.+.+++.|+|+ |.+|..++..|+..|.  +|++.+++++.++.....+..... ......+.. |  +.+.     
T Consensus         1 m~~~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~~a-----   71 (316)
T 1ldn_A            1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DYDD-----   71 (316)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CGGG-----
T ss_pred             CCCCCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cHHH-----
Confidence            66655678999999 9999999999998774  899999998766655555554221 100122222 1  1111     


Q ss_pred             HHHHHhcCCccEEEEccccCC
Q 022357           78 DFIKTQFGKLDILANNAGIAS   98 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~~   98 (298)
                            +...|++|.++|...
T Consensus        72 ------l~~aDvViia~~~~~   86 (316)
T 1ldn_A           72 ------CRDADLVVICAGANQ   86 (316)
T ss_dssp             ------TTTCSEEEECCSCCC
T ss_pred             ------hCCCCEEEEcCCCCC
Confidence                  236799999998754

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=95.95  E-value=0.02  Score=52.48  Aligned_cols=80  Identities=18%  Similarity=0.177  Sum_probs=50.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+|||.|+ |+||...+..+...|+ +|+++++++++++..    ++.+     ..  .+|.++.+.+.+.+.++.. 
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a----~~lG-----a~--~i~~~~~~~~~~~v~~~t~-  251 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA----KAQG-----FE--IADLSLDTPLHEQIAALLG-  251 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTT-----CE--EEETTSSSCHHHHHHHHHS-
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH----HHcC-----Cc--EEccCCcchHHHHHHHHhC-
Confidence            4789999995 9999988877666899 688898887664433    2233     22  2344443323222222211 


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                      -..+|++|.++|..
T Consensus       252 g~g~Dvvid~~G~~  265 (398)
T 1kol_A          252 EPEVDCAVDAVGFE  265 (398)
T ss_dssp             SSCEEEEEECCCTT
T ss_pred             CCCCCEEEECCCCc
Confidence            12699999999854

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.94  E-value=0.061  Score=47.55  Aligned_cols=75  Identities=19%  Similarity=0.213  Sum_probs=47.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++.|.|+ |.+|..++..|+..|+  +|++.++++++++.....+..............   .+.+.           +.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~a-----------~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHSE-----------LA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHHH-----------hC
Confidence            6889998 9999999999999998  999999998766654444433211000112211   12111           23


Q ss_pred             CccEEEEccccC
Q 022357           86 KLDILANNAGIA   97 (298)
Q Consensus        86 ~id~lv~nAg~~   97 (298)
                      ..|++|.++|..
T Consensus        67 ~aDvVIi~~~~~   78 (304)
T 2v6b_A           67 DAQVVILTAGAN   78 (304)
T ss_dssp             TCSEEEECC---
T ss_pred             CCCEEEEcCCCC
Confidence            679999999864

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=95.91  E-value=0.016  Score=52.51  Aligned_cols=77  Identities=17%  Similarity=0.177  Sum_probs=49.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.++||+|+ |+||..++..+...|+ +|+++++++++.+.. +++   +.+    .+  .|..+.+ +.   +.+.+.
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~----~v--i~~~~~~-~~---~~~~~~  254 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GAT----HV--INSKTQD-PV---AAIKEI  254 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCS----EE--EETTTSC-HH---HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCC----EE--ecCCccC-HH---HHHHHh
Confidence            4689999995 9999998877767899 699999887664433 232   321    12  2333322 22   222222


Q ss_pred             c-CCccEEEEcccc
Q 022357           84 F-GKLDILANNAGI   96 (298)
Q Consensus        84 ~-g~id~lv~nAg~   96 (298)
                      . +.+|++|.++|.
T Consensus       255 ~~gg~D~vid~~g~  268 (371)
T 1f8f_A          255 TDGGVNFALESTGS  268 (371)
T ss_dssp             TTSCEEEEEECSCC
T ss_pred             cCCCCcEEEECCCC
Confidence            2 379999999984

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.87  E-value=0.0075  Score=53.79  Aligned_cols=39  Identities=26%  Similarity=0.336  Sum_probs=33.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~   46 (298)
                      +++|+||+|+||..+++.+...|++|+++++++++.+..
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            799999999999999888888899999999987765443

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=95.87  E-value=0.014  Score=53.40  Aligned_cols=43  Identities=14%  Similarity=0.135  Sum_probs=37.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~   46 (298)
                      .+.+++++|+|+ |++|+.+++.+...|++|++.+|++.+++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            346889999996 8999999999999999999999988765543

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.79  E-value=0.012  Score=52.18  Aligned_cols=39  Identities=28%  Similarity=0.279  Sum_probs=33.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~   46 (298)
                      .+||+||+|++|...+..+...|++|+++++++++.+..
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~  187 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL  187 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            399999999999998888888899999999988765444

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.76  E-value=0.025  Score=52.39  Aligned_cols=59  Identities=20%  Similarity=0.189  Sum_probs=42.7

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSS   75 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~   75 (298)
                      ..++|.|. |-+|+.+++.|.++|+.|++++++++..+...    ..+     +.++..|.++.+.+++
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~----~~g-----~~vi~GDat~~~~L~~   63 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR----KFG-----MKVFYGDATRMDLLES   63 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH----HTT-----CCCEESCTTCHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----hCC-----CeEEEcCCCCHHHHHh
Confidence            46899997 88999999999999999999999987654432    222     3445556665554433

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.75  E-value=0.037  Score=47.47  Aligned_cols=78  Identities=14%  Similarity=0.170  Sum_probs=57.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            8 YAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      +++|.|++|.+|+.+++.+.+. +++|+......+++++...    ..     .. +.+|.+.++.+...+..+.+.  .
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~-----~D-vvIDfT~p~a~~~~~~~a~~~--g   69 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GN-----TE-VVIDFTHPDVVMGNLEFLIDN--G   69 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TT-----CC-EEEECSCTTTHHHHHHHHHHT--T
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cC-----Cc-EEEEccChHHHHHHHHHHHHc--C
Confidence            5899999999999999999876 8998865544344443322    11     22 567999999888888776665  7


Q ss_pred             ccEEEEccccC
Q 022357           87 LDILANNAGIA   97 (298)
Q Consensus        87 id~lv~nAg~~   97 (298)
                      +++|+...|..
T Consensus        70 ~~~VigTTG~~   80 (245)
T 1p9l_A           70 IHAVVGTTGFT   80 (245)
T ss_dssp             CEEEECCCCCC
T ss_pred             CCEEEcCCCCC
Confidence            88999888753

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=95.75  E-value=0.0021  Score=58.30  Aligned_cols=39  Identities=18%  Similarity=0.238  Sum_probs=34.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR   42 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~   42 (298)
                      ++.||++.|.|. |.||+.+++.|.+.|++|++.++++.+
T Consensus       172 ~L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~~  210 (355)
T 1c1d_A          172 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTER  210 (355)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence            578999999975 999999999999999999988887654

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.72  E-value=0.0067  Score=54.16  Aligned_cols=84  Identities=15%  Similarity=0.111  Sum_probs=55.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+++++|.|++.-+|+.+|+.|+..|++|.++.|+..++.+...++.   ...  .....+..++.+++++.+.    
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la---~~~--~~~t~~~~t~~~~L~e~l~----  244 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK---LNK--HHVEDLGEYSEDLLKKCSL----  244 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS---CCC--CEEEEEEECCHHHHHHHHH----
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHh---hhc--ccccccccccHhHHHHHhc----
Confidence            4678999999998889999999999999999999887433211111111   110  1111111234466666665    


Q ss_pred             hcCCccEEEEccccCC
Q 022357           83 QFGKLDILANNAGIAS   98 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~   98 (298)
                         .-|+||...|...
T Consensus       245 ---~ADIVIsAtg~p~  257 (320)
T 1edz_A          245 ---DSDVVITGVPSEN  257 (320)
T ss_dssp             ---HCSEEEECCCCTT
T ss_pred             ---cCCEEEECCCCCc
Confidence               4699999998653

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.69  E-value=0.013  Score=51.21  Aligned_cols=37  Identities=24%  Similarity=0.279  Sum_probs=34.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~   39 (298)
                      .+.||+++|.|+++-+|+.++..|+..|++|.++.|+
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~  193 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK  193 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            4689999999999999999999999999999998764

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.67  E-value=0.021  Score=51.69  Aligned_cols=82  Identities=22%  Similarity=0.276  Sum_probs=55.2

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhhHHHHHHHHhcCCCCcceeEE
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLFH   63 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   63 (298)
                      +.+++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+...+.++...... .+..+
T Consensus       116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v-~v~~~  193 (353)
T 3h5n_A          116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEI-SVSEI  193 (353)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTS-EEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCC-eEEEe
Confidence            45788999998 8999999999999997 788888753                   23445555565543321 25566


Q ss_pred             EeccCcHHHHHHHHHHHHHhcCCccEEEEccc
Q 022357           64 QLDISDLASVSSLADFIKTQFGKLDILANNAG   95 (298)
Q Consensus        64 ~~Dls~~~~v~~~~~~~~~~~g~id~lv~nAg   95 (298)
                      ..+++...++..        +...|+||.+..
T Consensus       194 ~~~i~~~~~~~~--------~~~~DlVvd~~D  217 (353)
T 3h5n_A          194 ALNINDYTDLHK--------VPEADIWVVSAD  217 (353)
T ss_dssp             ECCCCSGGGGGG--------SCCCSEEEECCC
T ss_pred             ecccCchhhhhH--------hccCCEEEEecC
Confidence            666665543221        347788887653

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.66  E-value=0.035  Score=49.70  Aligned_cols=78  Identities=18%  Similarity=0.188  Sum_probs=48.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+++|+|+ |++|...+.-+... |++|+++++++++.+..    ++.+.+    ..+  |-.+ +..+. +.++...
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~----~~lGa~----~~i--~~~~-~~~~~-v~~~t~g  237 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA----REVGAD----AAV--KSGA-GAADA-IRELTGG  237 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH----HHTTCS----EEE--ECST-THHHH-HHHHHGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHcCCC----EEE--cCCC-cHHHH-HHHHhCC
Confidence            4789999998 99999877666556 78999999987764432    233332    222  2222 22222 2222111


Q ss_pred             cCCccEEEEcccc
Q 022357           84 FGKLDILANNAGI   96 (298)
Q Consensus        84 ~g~id~lv~nAg~   96 (298)
                       ..+|+++.+.|.
T Consensus       238 -~g~d~v~d~~G~  249 (345)
T 3jv7_A          238 -QGATAVFDFVGA  249 (345)
T ss_dssp             -GCEEEEEESSCC
T ss_pred             -CCCeEEEECCCC
Confidence             179999999984

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.65  E-value=0.095  Score=46.57  Aligned_cols=77  Identities=17%  Similarity=0.145  Sum_probs=49.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC-C--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            8 YAVVTGSNKGIGFETVRQLASK-G--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~-G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++.|+||+|.+|.+++..|+.+ +  .+++++++++ +.+....++..... .  ......--++  . ...+       
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~-~--~~v~~~~~~~--~-~~~~-------   67 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPT-A--VKIKGFSGED--A-TPAL-------   67 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCS-S--EEEEEECSSC--C-HHHH-------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCC-C--ceEEEecCCC--c-HHHh-------
Confidence            6889999999999999999876 4  5799999987 45555556654321 1  2221110011  1 1112       


Q ss_pred             CCccEEEEccccCC
Q 022357           85 GKLDILANNAGIAS   98 (298)
Q Consensus        85 g~id~lv~nAg~~~   98 (298)
                      ...|++|..||...
T Consensus        68 ~~aDivii~ag~~r   81 (312)
T 3hhp_A           68 EGADVVLISAGVAR   81 (312)
T ss_dssp             TTCSEEEECCSCSC
T ss_pred             CCCCEEEEeCCCCC
Confidence            26899999999753

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=95.63  E-value=0.018  Score=52.77  Aligned_cols=80  Identities=15%  Similarity=0.194  Sum_probs=50.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.++||.|+ |+||...+..+...|+ +|+++++++++++..    ++.+     ..  .+|..+.+.+.+.+.++...
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lG-----a~--~i~~~~~~~~~~~~~~~~~g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL----SDAG-----FE--TIDLRNSAPLRDQIDQILGK  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----HTTT-----CE--EEETTSSSCHHHHHHHHHSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHcC-----Cc--EEcCCCcchHHHHHHHHhCC
Confidence            4789999997 9999988877766899 899999987664432    2232     22  23544432212222222111


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                       ..+|++|.++|..
T Consensus       253 -~g~Dvvid~~g~~  265 (398)
T 2dph_A          253 -PEVDCGVDAVGFE  265 (398)
T ss_dssp             -SCEEEEEECSCTT
T ss_pred             -CCCCEEEECCCCc
Confidence             1699999999853

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.62  E-value=0.35  Score=46.07  Aligned_cols=144  Identities=11%  Similarity=0.021  Sum_probs=87.6

Q ss_pred             CCcEEEEeCCCC-chhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH-HHH
Q 022357            5 TKKYAVVTGSNK-GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF-IKT   82 (298)
Q Consensus         5 ~~~~vlITGas~-gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~-~~~   82 (298)
                      .+++.++....+ +++.+++..|.++|.+|+.+.-....                          +.+.+...+.. +..
T Consensus        49 ~g~wlv~~~~~~~~~~~~l~~~L~~~G~~v~~v~~~~~~--------------------------~~~~~~~~l~~~~~~  102 (525)
T 3qp9_A           49 SGRWLVVVPEDRSAEAAPVLAALSGAGADPVQLDVSPLG--------------------------DRQRLAATLGEALAA  102 (525)
T ss_dssp             CSEEEEEEEGGGCTTTHHHHHHHHHTTCEEEEEEECTTC--------------------------CHHHHHHHHHHHHHH
T ss_pred             CCeEEEEECCCcchHHHHHHHHHHhcCCeEEEEeCCCCC--------------------------CHHHHHHHHHhhhhc
Confidence            455666655443 28899999999999998776543210                          44444444442 224


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhh-hhceeHHHHHHHHhhhhccCCCC
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLK-TNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ..+.++.|+|..+.........                              ..+. ..+.+.+.|+|++...   ....
T Consensus       103 ~~~~~~~v~~l~~~~~~~~~~~------------------------------~~~~~~g~~~~l~l~qal~~~---~~~~  149 (525)
T 3qp9_A          103 AGGAVDGVLSLLAWDESAHPGH------------------------------PAPFTRGTGATLTLVQALEDA---GVAA  149 (525)
T ss_dssp             TTSCCSEEEECGGGCCCBCTTS------------------------------CTTCBHHHHHHHHHHHHHHHT---TCCS
T ss_pred             ccCCCCeEEEcccCCCCccccc------------------------------cccccchHHHHHHHHHHHHhc---CCCC
Confidence            4567889999887643221100                              0111 3456677888887652   2236


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      ++++++..+....                                           .....-...++++-+|.|+++.|+
T Consensus       150 ~l~~vT~ga~~~~-------------------------------------------~~~~~~~p~~a~l~Gl~r~~~~E~  186 (525)
T 3qp9_A          150 PLWCVTHGAVSVG-------------------------------------------RADHVTSPAQAMVWGMGRVAALEH  186 (525)
T ss_dssp             CEEEEEESCCCCB-------------------------------------------TTBCCSCHHHHHHHHHHHHHHHHS
T ss_pred             cEEEEECCCEeCC-------------------------------------------CCCCCCCHHHHHHHHHHHHHHHhC
Confidence            7888776443221                                           111123568999999999999999


Q ss_pred             CCcEEEEee
Q 022357          242 PKFCVNCVC  250 (298)
Q Consensus       242 ~~i~vn~v~  250 (298)
                      |++.+..|.
T Consensus       187 p~~~~~~vD  195 (525)
T 3qp9_A          187 PERWGGLID  195 (525)
T ss_dssp             TTTEEEEEE
T ss_pred             CCceEEEEE
Confidence            988765554

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=95.59  E-value=0.092  Score=46.94  Aligned_cols=78  Identities=12%  Similarity=0.124  Sum_probs=53.4

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+++.|+|| |.+|..++..|+..+.  +|++.++++++++..+..+.....-...+.+.. |  +.++    +      
T Consensus         9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a----~------   74 (326)
T 2zqz_A            9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSD----A------   74 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG----G------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHH----h------
Confidence            458999999 9999999999998875  899999998888777776664311001122222 1  1111    2      


Q ss_pred             cCCccEEEEccccCC
Q 022357           84 FGKLDILANNAGIAS   98 (298)
Q Consensus        84 ~g~id~lv~nAg~~~   98 (298)
                       ...|++|..+|...
T Consensus        75 -~~aDvVii~ag~~~   88 (326)
T 2zqz_A           75 -KDADLVVITAGAPQ   88 (326)
T ss_dssp             -GGCSEEEECCCCC-
T ss_pred             -CCCCEEEEcCCCCC
Confidence             25799999998753

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=95.56  E-value=0.033  Score=51.58  Aligned_cols=72  Identities=15%  Similarity=0.093  Sum_probs=52.2

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +.+.+++++|.|+ |.+|+.+++.+.+.|++|++++.++......   +.        -..+..|..|.+.+.++++   
T Consensus        31 ~~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~---~a--------d~~~~~~~~d~~~l~~~a~---   95 (419)
T 4e4t_A           31 PILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGA---VA--------DRHLRAAYDDEAALAELAG---   95 (419)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHH---HS--------SEEECCCTTCHHHHHHHHH---
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhh---hC--------CEEEECCcCCHHHHHHHHh---
Confidence            3457899999987 6899999999999999999998765432211   10        1244578888888777763   


Q ss_pred             HhcCCccEEEE
Q 022357           82 TQFGKLDILAN   92 (298)
Q Consensus        82 ~~~g~id~lv~   92 (298)
                          ++|+++.
T Consensus        96 ----~~D~V~~  102 (419)
T 4e4t_A           96 ----LCEAVST  102 (419)
T ss_dssp             ----HCSEEEE
T ss_pred             ----cCCEEEE
Confidence                4788774

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=95.53  E-value=0.045  Score=52.76  Aligned_cols=62  Identities=16%  Similarity=0.108  Sum_probs=43.7

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecC-------------------chhhHHHHHHHHhcCCCCcceeEE
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARD-------------------EKRGLEAVEKLKASGVDPELLLFH   63 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~   63 (298)
                      +.+++|+|.|+ ||+|.++++.|+..|. ++.+++.+                   ..+.+..++.++...... .+..+
T Consensus       325 L~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v-~v~~~  402 (598)
T 3vh1_A          325 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLM-DATGV  402 (598)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTC-EEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCc-EEEEE
Confidence            45678999998 8999999999999997 68888654                   135666777777644331 24444


Q ss_pred             Eecc
Q 022357           64 QLDI   67 (298)
Q Consensus        64 ~~Dl   67 (298)
                      ..++
T Consensus       403 ~~~I  406 (598)
T 3vh1_A          403 KLSI  406 (598)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            4443

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=95.44  E-value=0.064  Score=51.84  Aligned_cols=91  Identities=14%  Similarity=0.064  Sum_probs=55.8

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc-------------------hhhHHHHHHHHhcCCCCcceeEE
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE-------------------KRGLEAVEKLKASGVDPELLLFH   63 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   63 (298)
                      +.+.+|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+.+..++.++...... .+..+
T Consensus       324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V-~v~~~  401 (615)
T 4gsl_A          324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLM-DATGV  401 (615)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTC-EEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCc-EEEEe
Confidence            45788999998 8999999999999997 688888753                   34566666676654431 24444


Q ss_pred             Eecc-------CcHHHHHHHHHHHHHhcCCccEEEEcccc
Q 022357           64 QLDI-------SDLASVSSLADFIKTQFGKLDILANNAGI   96 (298)
Q Consensus        64 ~~Dl-------s~~~~v~~~~~~~~~~~g~id~lv~nAg~   96 (298)
                      ..++       ++.+....-.+.+.+.+...|+||.+..-
T Consensus       402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn  441 (615)
T 4gsl_A          402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS  441 (615)
T ss_dssp             CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred             eccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCC
Confidence            4444       12110000011111222367999988753

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.43  E-value=0.015  Score=52.11  Aligned_cols=71  Identities=17%  Similarity=0.200  Sum_probs=55.1

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      +.++|.|+ |.+|+.++++|.++|+ |++++++++..+ . .   ..+     +.++..|.++++.++++-      ..+
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~-~---~~~-----~~~i~gd~~~~~~L~~a~------i~~  177 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-V-L---RSG-----ANFVHGDPTRVSDLEKAN------VRG  177 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-H-H---HTT-----CEEEESCTTSHHHHHHTC------STT
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-H-H---hCC-----cEEEEeCCCCHHHHHhcC------hhh
Confidence            47999997 9999999999999999 999999987655 2 2   221     778999999998776551      136


Q ss_pred             ccEEEEccc
Q 022357           87 LDILANNAG   95 (298)
Q Consensus        87 id~lv~nAg   95 (298)
                      .|.+|...+
T Consensus       178 a~~vi~~~~  186 (336)
T 1lnq_A          178 ARAVIVDLE  186 (336)
T ss_dssp             EEEEEECCS
T ss_pred             ccEEEEcCC
Confidence            788887654

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.42  E-value=0.03  Score=50.13  Aligned_cols=77  Identities=19%  Similarity=0.262  Sum_probs=47.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+++|.|+ |++|...+..+... |++|+++++++++++.    .++.+.+    .  ..|-++.+.+++    +.+.
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~----~~~~Ga~----~--~i~~~~~~~~~~----v~~~  227 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNL----AKKIGAD----V--TINSGDVNPVDE----IKKI  227 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHH----HHHTTCS----E--EEEC-CCCHHHH----HHHH
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhh----hhhcCCe----E--EEeCCCCCHHHH----hhhh
Confidence            4789999987 78887777777655 7899999998765432    2233322    1  234444443333    3332


Q ss_pred             cC--CccEEEEcccc
Q 022357           84 FG--KLDILANNAGI   96 (298)
Q Consensus        84 ~g--~id~lv~nAg~   96 (298)
                      .+  .+|.++.+++.
T Consensus       228 t~g~g~d~~~~~~~~  242 (348)
T 4eez_A          228 TGGLGVQSAIVCAVA  242 (348)
T ss_dssp             TTSSCEEEEEECCSC
T ss_pred             cCCCCceEEEEeccC
Confidence            32  57888888764

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.40  E-value=0.029  Score=48.89  Aligned_cols=36  Identities=11%  Similarity=0.102  Sum_probs=33.3

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~   39 (298)
                      +.||+++|.|+++-+|+.++..|++.|++|.++.++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            679999999999999999999999999999998764

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.35  E-value=0.14  Score=45.30  Aligned_cols=77  Identities=21%  Similarity=0.158  Sum_probs=53.0

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +++.|+|+ |.+|..++..|+.++  .+|++.++++++++..+..+.....-...+.+.. |  +.++           +
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------L   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------h
Confidence            36889998 999999999999987  5899999998887776777764311001122222 1  2221           2


Q ss_pred             CCccEEEEccccCC
Q 022357           85 GKLDILANNAGIAS   98 (298)
Q Consensus        85 g~id~lv~nAg~~~   98 (298)
                      ...|++|..+|...
T Consensus        66 ~~aD~Vii~ag~~~   79 (310)
T 2xxj_A           66 EGARAVVLAAGVAQ   79 (310)
T ss_dssp             TTEEEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            36799999998753

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.33  E-value=0.18  Score=44.85  Aligned_cols=74  Identities=15%  Similarity=0.155  Sum_probs=50.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcC---CCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASG---VDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++.|+|+ |.+|..++..|+.+|.  +|++.++++++++..+.++....   ...  ......|  +.+           
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~--~~v~~~~--~~~-----------   65 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFD--TRVTGTN--DYG-----------   65 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCC--CEEEEES--SSG-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCC--cEEEECC--CHH-----------
Confidence            5789997 9999999999999887  89999999887766655555321   011  2222111  111           


Q ss_pred             hcCCccEEEEccccC
Q 022357           83 QFGKLDILANNAGIA   97 (298)
Q Consensus        83 ~~g~id~lv~nAg~~   97 (298)
                      .+...|++|..||..
T Consensus        66 a~~~aDvVii~ag~~   80 (314)
T 3nep_X           66 PTEDSDVCIITAGLP   80 (314)
T ss_dssp             GGTTCSEEEECCCC-
T ss_pred             HhCCCCEEEECCCCC
Confidence            123679999999975

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.22  E-value=0.033  Score=49.04  Aligned_cols=41  Identities=22%  Similarity=0.221  Sum_probs=36.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL   44 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~   44 (298)
                      .+.+++++|.|+ |.||+++++.|...|++|++.+|+.++..
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~  194 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLA  194 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            467899999997 99999999999999999999999876543

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.18  E-value=0.014  Score=50.85  Aligned_cols=42  Identities=21%  Similarity=0.355  Sum_probs=36.3

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~   46 (298)
                      +.+++++|.|+ |++|++++..|.+.|++|++.+|+.++.+++
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l  168 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKL  168 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence            46789999996 7999999999999999999999997665544

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.16  E-value=0.035  Score=48.39  Aligned_cols=41  Identities=10%  Similarity=0.103  Sum_probs=36.0

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV   47 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~   47 (298)
                      +++.|.|++|-+|.+++..|++.|++|++.+|++++.+...
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            47999999999999999999999999999999987655543

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.14  E-value=0.22  Score=44.08  Aligned_cols=45  Identities=24%  Similarity=0.169  Sum_probs=37.6

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHh
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKA   52 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~   52 (298)
                      +++.|+|| |.+|..++..|+..|. .|++.++++++++.....+..
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~   48 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYE   48 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHH
Confidence            47999999 9999999999999997 899999998777665555543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.10  E-value=0.033  Score=48.76  Aligned_cols=37  Identities=30%  Similarity=0.255  Sum_probs=33.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~   39 (298)
                      .+.||.++|.|.++-+|+.++..|+..|++|.++.+.
T Consensus       158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~  194 (286)
T 4a5o_A          158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF  194 (286)
T ss_dssp             CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            3689999999999889999999999999999998764

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.07  E-value=0.29  Score=43.07  Aligned_cols=77  Identities=13%  Similarity=0.059  Sum_probs=50.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCC-CCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++.|+|+ |+||..++..|+.++.  ++++.+.+++..+..+..+..... -.........  .+.++           +
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~~-----------~   67 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHHH-----------h
Confidence            4778895 9999999999998874  799999998777766666664210 0000222221  12221           1


Q ss_pred             CCccEEEEccccCC
Q 022357           85 GKLDILANNAGIAS   98 (298)
Q Consensus        85 g~id~lv~nAg~~~   98 (298)
                      ..-|++|..||...
T Consensus        68 ~~aDvVvitAG~pr   81 (294)
T 2x0j_A           68 KGSEIIVVTAGLAR   81 (294)
T ss_dssp             TTCSEEEECCCCCC
T ss_pred             CCCCEEEEecCCCC
Confidence            25799999999764

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.05  E-value=0.032  Score=48.14  Aligned_cols=45  Identities=27%  Similarity=0.338  Sum_probs=38.0

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL   50 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~   50 (298)
                      +.+ +++|.|+ |++|++++..|.+.|++|.+.+|+.++.+.+.+++
T Consensus       115 l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          115 LKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            567 8999997 88999999999999999999999987766655543

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.04  E-value=0.011  Score=54.66  Aligned_cols=35  Identities=20%  Similarity=0.267  Sum_probs=31.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEE-EEec
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVV-LTAR   38 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vi-i~~r   38 (298)
                      ++.+++++|+| .|.+|+.+++.|++.|++|+ +.++
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcC
Confidence            46789999998 69999999999999999998 7777

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.03  E-value=0.03  Score=48.78  Aligned_cols=45  Identities=22%  Similarity=0.313  Sum_probs=39.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKL   50 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~   50 (298)
                      .+++++|.|+ ||.|++++..|++.|+ +|.+..|+.++.+++++++
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            4578999996 8999999999999997 7999999988877777665

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=94.97  E-value=0.032  Score=48.82  Aligned_cols=37  Identities=27%  Similarity=0.299  Sum_probs=33.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~   39 (298)
                      .+.||.++|.|+++-+|+.++..|...|++|.++.|.
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            4689999999998889999999999999999988764

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=94.88  E-value=0.048  Score=47.88  Aligned_cols=41  Identities=22%  Similarity=0.268  Sum_probs=36.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL   44 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~   44 (298)
                      .+.+++++|.|+ |.||+++++.|...|++|++.+|+.++.+
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~  192 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLA  192 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            467899999995 89999999999999999999999876533

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=94.87  E-value=0.22  Score=44.25  Aligned_cols=43  Identities=28%  Similarity=0.265  Sum_probs=36.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLK   51 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~   51 (298)
                      ++.|.|+ |.+|.+++..|++.|+  +|++.+++++.++.....+.
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~   46 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLI   46 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHH
Confidence            5889998 9999999999999999  99999999877766554443

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=94.86  E-value=0.043  Score=48.38  Aligned_cols=37  Identities=27%  Similarity=0.291  Sum_probs=33.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~   39 (298)
                      .+.||.++|.|+++-+|+.++..|++.|++|.++.|.
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~  198 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG  198 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            4689999999998889999999999999999999874

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=94.79  E-value=0.044  Score=48.89  Aligned_cols=50  Identities=24%  Similarity=0.266  Sum_probs=37.2

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK   51 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~   51 (298)
                      |+....++|.|.|| |-+|+.+|..++..|++|++.+.+++.++...+.+.
T Consensus         1 Ma~p~~~~VaViGa-G~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   50 (319)
T 3ado_A            1 MASPAAGDVLIVGS-GLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIR   50 (319)
T ss_dssp             ------CEEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHH
T ss_pred             CCCCCCCeEEEECC-cHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHH
Confidence            55655677888888 899999999999999999999999877665554443

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=94.78  E-value=0.13  Score=45.71  Aligned_cols=86  Identities=13%  Similarity=0.119  Sum_probs=52.4

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHH-------HHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-------LKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      .+++.|.|. |.+|..++..|++.|++|++.+|++++.+.+.+.       +.+.. ..  ..++..=+.+...++.++.
T Consensus        31 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~-~~--aDvVi~~vp~~~~~~~v~~  106 (320)
T 4dll_A           31 ARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAA-RD--ADIVVSMLENGAVVQDVLF  106 (320)
T ss_dssp             CSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHH-TT--CSEEEECCSSHHHHHHHHT
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHH-hc--CCEEEEECCCHHHHHHHHc
Confidence            357788866 9999999999999999999999998766554332       00000 00  1222233445556666654


Q ss_pred             --HHHHhcCCccEEEEccc
Q 022357           79 --FIKTQFGKLDILANNAG   95 (298)
Q Consensus        79 --~~~~~~g~id~lv~nAg   95 (298)
                        .+.....+=.++|+...
T Consensus       107 ~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          107 AQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             TTCHHHHCCTTCEEEECSC
T ss_pred             chhHHhhCCCCCEEEecCC
Confidence              44444333345666554

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=94.71  E-value=0.15  Score=43.59  Aligned_cols=91  Identities=18%  Similarity=0.206  Sum_probs=55.3

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCchhhHHHHHHHHhc-CCCC----cceeEEEeccCcHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEKRGLEAVEKLKAS-GVDP----ELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~-Vii~~r~~~~~~~~~~~~~~~-~~~~----~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      +.++.|.|+ |.+|..++..|++.|++ |.+.+|++++.+...+.+.-. ..+.    ....++-.-+ ....++.+++.
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av-~~~~~~~v~~~   87 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSL-KDSAFAELLQG   87 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECC-CHHHHHHHHHH
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEec-CHHHHHHHHHH
Confidence            457888987 99999999999999998 888999987766655442100 0000    0011222112 23355667766


Q ss_pred             HHHhcCCccEEEEccccCC
Q 022357           80 IKTQFGKLDILANNAGIAS   98 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~   98 (298)
                      +.....+=.++|++++..+
T Consensus        88 l~~~~~~~~ivv~~s~~~~  106 (266)
T 3d1l_A           88 IVEGKREEALMVHTAGSIP  106 (266)
T ss_dssp             HHTTCCTTCEEEECCTTSC
T ss_pred             HHhhcCCCcEEEECCCCCc
Confidence            6544333346777776543

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=94.69  E-value=0.036  Score=49.20  Aligned_cols=42  Identities=24%  Similarity=0.176  Sum_probs=34.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC--CCEEEEEecCchhhHHHHHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASK--GITVVLTARDEKRGLEAVEKL   50 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~--G~~Vii~~r~~~~~~~~~~~~   50 (298)
                      ++.|.|+ |.+|..++..|++.  |++|++.++++++++.....+
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l   45 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDM   45 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhH
Confidence            5789998 99999999999985  789999999987766544333

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=94.62  E-value=0.06  Score=47.13  Aligned_cols=38  Identities=26%  Similarity=0.232  Sum_probs=34.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      .+.|++++|.|++.-+|+-+++.|+..|++|.++.+..
T Consensus       156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  193 (288)
T 1b0a_A          156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT  193 (288)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            46899999999998899999999999999999987553

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=94.61  E-value=0.087  Score=49.58  Aligned_cols=41  Identities=17%  Similarity=0.069  Sum_probs=33.5

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHC-----CCEEEEEecCchhhHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASK-----GITVVLTARDEKRGLEA   46 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~-----G~~Vii~~r~~~~~~~~   46 (298)
                      ++++.|.||++..|.+++..|+++     +.+|++.++++++++..
T Consensus        28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~   73 (472)
T 1u8x_X           28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRI   73 (472)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHH
Confidence            457888898887788899889988     67899999998876554

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=94.60  E-value=0.15  Score=43.65  Aligned_cols=81  Identities=17%  Similarity=0.124  Sum_probs=54.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHh---------cC------CCCcceeEEEeccCc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA---------SG------VDPELLLFHQLDISD   69 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~---------~~------~~~~~~~~~~~Dls~   69 (298)
                      .+.+||..|++.|   ..+..|+++|++|+.++.++.-++...+....         ..      ....++.++++|+.+
T Consensus        68 ~~~~vLD~GCG~G---~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~  144 (252)
T 2gb4_A           68 SGLRVFFPLCGKA---IEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD  144 (252)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred             CCCeEEEeCCCCc---HHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence            4678999999887   45677888999999999998765554333211         00      011248899999987


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEccccC
Q 022357           70 LASVSSLADFIKTQFGKLDILANNAGIA   97 (298)
Q Consensus        70 ~~~v~~~~~~~~~~~g~id~lv~nAg~~   97 (298)
                      ...         ...+.+|+|+.++...
T Consensus       145 l~~---------~~~~~FD~V~~~~~l~  163 (252)
T 2gb4_A          145 LPR---------ANIGKFDRIWDRGALV  163 (252)
T ss_dssp             GGG---------GCCCCEEEEEESSSTT
T ss_pred             CCc---------ccCCCEEEEEEhhhhh
Confidence            642         0125799999876543

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=94.56  E-value=0.069  Score=48.56  Aligned_cols=63  Identities=16%  Similarity=0.115  Sum_probs=46.5

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      +.+++++|.|+ |.+|+.+++.+.+.|++|++++.++......      . .    -..+..|..|.+.+.++++
T Consensus        10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~------~-a----d~~~~~~~~d~~~l~~~~~   72 (377)
T 3orq_A           10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRY------V-A----HEFIQAKYDDEKALNQLGQ   72 (377)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGG------G-S----SEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhh------h-C----CEEEECCCCCHHHHHHHHH
Confidence            46789999997 7899999999999999999998775421100      0 0    2345678888887777765

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=94.53  E-value=0.08  Score=46.53  Aligned_cols=41  Identities=10%  Similarity=0.103  Sum_probs=34.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVE   48 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~   48 (298)
                      +++.|.| .|-+|..++..|++.|++|++.+|++++.+...+
T Consensus         8 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   48 (303)
T 3g0o_A            8 FHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLA   48 (303)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            4677776 5999999999999999999999999877665543

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=94.50  E-value=0.18  Score=44.10  Aligned_cols=85  Identities=11%  Similarity=-0.008  Sum_probs=56.1

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHH-------HHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK-------LKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      +++.|.| .|-+|..++..|++.|++|++.+|++++.+...+.       +.+...    ..++..-+.+...++.+++.
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~----aDvvi~~vp~~~~~~~v~~~   90 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA----ADLIHITVLDDAQVREVVGE   90 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT----SSEEEECCSSHHHHHHHHHH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh----CCEEEEECCChHHHHHHHHH
Confidence            4677777 58999999999999999999999998876655432       111111    12233334556677777777


Q ss_pred             HHHhcCCccEEEEcccc
Q 022357           80 IKTQFGKLDILANNAGI   96 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~   96 (298)
                      +.....+=.++|++...
T Consensus        91 l~~~l~~g~ivv~~st~  107 (296)
T 3qha_A           91 LAGHAKPGTVIAIHSTI  107 (296)
T ss_dssp             HHTTCCTTCEEEECSCC
T ss_pred             HHHhcCCCCEEEEeCCC
Confidence            76554444567766543

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=94.49  E-value=0.12  Score=44.83  Aligned_cols=88  Identities=14%  Similarity=0.088  Sum_probs=53.0

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCC----cceeEEEeccCcHHHHHHHH---HH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDP----ELLLFHQLDISDLASVSSLA---DF   79 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dls~~~~v~~~~---~~   79 (298)
                      +++.|.|+ |.+|..++..|++.|++|++.+|++++.+...+.--....+.    ....++..=+.+...++.++   +.
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            46778875 999999999999999999999999887666543200000000    00122223344555666666   55


Q ss_pred             HHHhcCCccEEEEccc
Q 022357           80 IKTQFGKLDILANNAG   95 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg   95 (298)
                      +.....+=.++|+..+
T Consensus        81 l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           81 VLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHHHCCTTCEEEECSC
T ss_pred             HhhcCCCCCEEEeCCC
Confidence            5544333346666644

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=94.48  E-value=0.14  Score=44.93  Aligned_cols=80  Identities=16%  Similarity=0.178  Sum_probs=50.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      +++.|.||.|-+|.+++..|.+.|++|++.+|++.....  +.+.  ..   .+.++.+-..   .+..+++++.....+
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~~~--~~~~--~a---DvVilavp~~---~~~~vl~~l~~~l~~   91 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAE--SILA--NA---DVVIVSVPIN---LTLETIERLKPYLTE   91 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHH--HHHT--TC---SEEEECSCGG---GHHHHHHHHGGGCCT
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccCHH--HHhc--CC---CEEEEeCCHH---HHHHHHHHHHhhcCC
Confidence            568999999999999999999999999999998753211  1111  11   1555554332   356666666443322


Q ss_pred             ccEEEEcccc
Q 022357           87 LDILANNAGI   96 (298)
Q Consensus        87 id~lv~nAg~   96 (298)
                      =-+|+..+++
T Consensus        92 ~~iv~~~~sv  101 (298)
T 2pv7_A           92 NMLLADLTSV  101 (298)
T ss_dssp             TSEEEECCSC
T ss_pred             CcEEEECCCC
Confidence            1255555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	298
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	9e-53
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-40
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	3e-37
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	5e-32
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-31
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-30
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	1e-29
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	5e-29
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	5e-29
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-27
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	7e-26
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	3e-25
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	7e-25
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	7e-25
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	7e-25
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	8e-25
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	9e-25
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-24
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-24
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	5e-24
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-23
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-23
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-23
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	5e-23
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	8e-23
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-04
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	1e-22
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	3e-08
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-22
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-22
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-22
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	9e-22
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-05
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	1e-21
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-21
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-05
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	9e-21
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	5e-04
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-20
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	9e-06
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	4e-20
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	5e-20
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	0.001
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-19
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-19
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	5e-04
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	5e-19
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-07
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	7e-19
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-18
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-18
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	5e-05
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-18
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-04
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	5e-18
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	3e-04
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-17
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	5e-06
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-17
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	9e-17
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	5e-06
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	2e-16
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	1e-06
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	5e-16
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	6e-16
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	7e-16
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-04
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	2e-14
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	3e-14
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	7e-14
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-13
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.003
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	3e-13
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-13
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-11
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-10
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-04
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	5e-10
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-09
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	0.001
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	4e-09
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	1e-08
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-08
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	4e-08
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	3e-07
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	2e-05
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	3e-05
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	4e-04
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	6e-04
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	7e-04
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.001
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	0.001
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	0.002
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	0.002
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	0.003

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (435), Expect = 9e-53
 Identities = 109/303 (35%), Positives = 154/303 (50%), Gaps = 42/303 (13%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
              A+VTG NKGIG   VR L       VVLTARD  RG  AV++L+A G+ P    FHQ
Sbjct: 3   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPR---FHQ 59

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           LDI DL S+ +L DF++ ++G LD+L NNAGIA    D   F                  
Sbjct: 60  LDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHI------------QAEV 107

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR--A 182
                       +KTN++GT+  C  L+PL++     R+VN+SS + +++ L   +    
Sbjct: 108 T-----------MKTNFFGTRDVCTELLPLIK--PQGRVVNVSS-IMSVRALKSCSPELQ 153

Query: 183 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY- 241
                E +TEE +  ++  + +D ++G     GW   SSAY V+K  +   +RI A++  
Sbjct: 154 QKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWP--SSAYGVTKIGVTVLSRIHARKLS 211

Query: 242 -----PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRKE 294
                 K  +N  CPG+V+TD+       S EEGAE+PV LALLP    GP G+F   K 
Sbjct: 212 EQRKGDKILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKR 271

Query: 295 EAP 297
              
Sbjct: 272 VEQ 274

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  139 bits (352), Expect = 1e-40
 Identities = 62/295 (21%), Positives = 102/295 (34%), Gaps = 58/295 (19%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +    VVTG+N+GIG   V+QL        ++ TARD ++    ++ +K S V       
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK-ATELKSIKDSRVH-----V 55

Query: 63  HQLDISDLASVSSLADFIKTQFGK--LDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
             L ++   S+ +    +    G   L +L NNAG+                       +
Sbjct: 56  LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVL----------------------L 93

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKA 180
            +         +  E L  N        + L+PLL+ + S    +  S            
Sbjct: 94  SYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLS------------ 141

Query: 181 RAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR 240
                            V+          +  +        AY++SKA IN + R LA  
Sbjct: 142 ------------VSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVD 189

Query: 241 YPKF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRK 293
                  V   CPG+V+T++      L+VE+     +      D    GRFF+R 
Sbjct: 190 LKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNGRFFMRN 244

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  131 bits (330), Expect = 3e-37
 Identities = 58/285 (20%), Positives = 91/285 (31%), Gaps = 64/285 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TGS+ GIG  T    A +G  V +T R  +R  E  +++ A+GV  + +     D
Sbjct: 6   KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVAD 65

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++  A    +      +FGKLDIL NNAG A                    +   +    
Sbjct: 66  VTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTA--------QSIESYDAT- 116

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     L  N        +  +P L  +    +   S                   
Sbjct: 117 ----------LNLNLRSVIALTKKAVPHLSSTKGEIVNISSI------------------ 148

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC- 245
                                    +     P    Y ++KA I+ YTR  A    +   
Sbjct: 149 ------------------------ASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGI 184

Query: 246 -VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
            VN + PG V T      G +  E   +    +A + +  P G  
Sbjct: 185 RVNSISPGLVATGFGSAMG-MPEETSKKFYSTMATMKECVPAGVM 228

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 5e-32
 Identities = 54/289 (18%), Positives = 95/289 (32%), Gaps = 71/289 (24%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M     + A+VTG++ GIG    R L  +G+ VV  AR      E   + K++G     L
Sbjct: 5   MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGT-L 63

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEV 120
           + ++ D+S+   + S+   I++Q   +DI  NNAG+A     +              +  
Sbjct: 64  IPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLS------------GSTS 111

Query: 121 DWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL--SDSPRLVNLSSYVSALKDLPE 178
            W  +              N              ++    D   ++N++S +S  + LP 
Sbjct: 112 GWKDM-----------FNVNVLALSICTREAYQSMKERNVDDGHIININS-MSGHRVLPL 159

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
                                                    +  Y  +K  + A T  L 
Sbjct: 160 ---------------------------------------SVTHFYSATKYAVTALTEGLR 180

Query: 239 KRYPKF----CVNCVCPGFVKTDINFHAGILSVEEGAES-PVKLALLPD 282
           +   +        C+ PG V+T   F       E+ A +      L P+
Sbjct: 181 QELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPE 229

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  115 bits (290), Expect = 2e-31
 Identities = 50/285 (17%), Positives = 80/285 (28%), Gaps = 80/285 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG  +GIG    +  A +G  V L     + G E  E +  +        F Q+D
Sbjct: 6   KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIGGA--------FFQVD 56

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           + D        +      G++D+L NNA IA+    +                 +W +V 
Sbjct: 57  LEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLP------------EWRRV- 103

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     L+ N              +       +VN++S                  
Sbjct: 104 ----------LEVNLTAPMHLSALAAREMRKVGGGAIVNVAS------------------ 135

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                   +        ++AY  SK  +   TR LA        
Sbjct: 136 ------------------------VQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRI 171

Query: 245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
            VN V PG + T+    A    +    +         D     R 
Sbjct: 172 RVNAVAPGAIATEAVLEA----IALSPDPERTRRDWEDLHALRRL 212

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  113 bits (284), Expect = 2e-30
 Identities = 61/285 (21%), Positives = 94/285 (32%), Gaps = 64/285 (22%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TGS+ GIG  T    A +G  V +T R  +R  E  + +  SGV  + +     D
Sbjct: 6   KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVAD 65

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++       + +    QFGK+D+L NNAG A          D             + K  
Sbjct: 66  VTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTD--------QGIDIYHKT- 116

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     LK N     +  + + P L  S    +   S                   
Sbjct: 117 ----------LKLNLQAVIEMTKKVKPHLVASKGEIVNVSSI------------------ 148

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                   +A     P    Y ++KA ++ YTR  A    KF  
Sbjct: 149 ------------------------VAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGI 184

Query: 245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
            VN V PG V+T    +A  +  +   +    +A   +  P G  
Sbjct: 185 RVNSVSPGMVETGFT-NAMGMPDQASQKFYNFMASHKECIPIGAA 228

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (277), Expect = 1e-29
 Identities = 49/285 (17%), Positives = 79/285 (27%), Gaps = 78/285 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  ++TG+  GIG  T  + A     +VL   ++    E   K K  G     +    +D
Sbjct: 8   EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK---VHTFVVD 64

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
            S+   + S A  +K + G + IL NNAG+                           K  
Sbjct: 65  CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDP------------QIEKT- 111

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                      + N      T +A +P +  ++   +V ++S                  
Sbjct: 112 ----------FEVNVLAHFWTTKAFLPAMTKNNHGHIVTVAS------------------ 143

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC- 245
                                    A     P   AY  SK     + + L         
Sbjct: 144 ------------------------AAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQI 179

Query: 246 ----VNCVCPGFVKTDINFHAGI-----LSVEEGAESPVKLALLP 281
                 C+CP FV T    +        L  EE     +   L  
Sbjct: 180 TGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTE 224

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  108 bits (272), Expect = 5e-29
 Identities = 54/285 (18%), Positives = 86/285 (30%), Gaps = 80/285 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K AV+TG   GIG     + A +G  + +         EA   ++  G     +L  + D
Sbjct: 6   KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRR---VLTVKCD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +S    V +    + + FG+ DIL NNAGI  +    +   +             W K  
Sbjct: 61  VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFE------------QWKKT- 107

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                      + N        +A +P ++ +   R++NL+S                  
Sbjct: 108 ----------FEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY--------------- 142

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                             + Y  +KA    +TR LA    K   
Sbjct: 143 ---------------------------WLKIEAYTHYISTKAANIGFTRALASDLGKDGI 175

Query: 245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
            VN + P  V+T           E  A S +   L        R 
Sbjct: 176 TVNAIAPSLVRTATT--------EASALSAMFDVLPNMLQAIPRL 212

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  109 bits (273), Expect = 5e-29
 Identities = 53/291 (18%), Positives = 92/291 (31%), Gaps = 83/291 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG  +G+G E  RQ  + G  VVL    ++ G     +L  +        +  LD
Sbjct: 6   KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAA------RYQHLD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++       +  + + +FG +D L NNAGI++  F      +   ++             
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKV------------- 106

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     ++ N  G     + +IP ++ +    +VN+SS                  
Sbjct: 107 ----------VEINLTGVFIGMKTVIPAMKDAGGGSIVNISS------------------ 138

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC- 245
                                    A       +S+Y  SK  +   +++ A        
Sbjct: 139 ------------------------AAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRI 174

Query: 246 -VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEE 295
            VN V PG   T +    GI   E    +           P GR      E
Sbjct: 175 RVNSVHPGMTYTPMTAETGIRQGEGNYPNT----------PMGRVGNEPGE 215

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  104 bits (260), Expect = 4e-27
 Identities = 61/286 (21%), Positives = 101/286 (35%), Gaps = 76/286 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A+VTG ++GIG+  V +LAS G +V   +R++K   + + + ++ G   E       D
Sbjct: 9   CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVE---ASVCD 65

Query: 67  ISDLASVSSLADFIKTQF-GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           +S  +    L + +   F GKL+IL NNAGI   K   D   +            D+S +
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVE------------DYSLI 113

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      +  N+           P L+ S+   +V +SS                 
Sbjct: 114 -----------MSINFEAAYHLSVLAHPFLKASERGNVVFISS----------------- 145

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC 245
                                    ++     P+ + Y  +K  ++  TR LA  + K  
Sbjct: 146 -------------------------VSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDN 180

Query: 246 --VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             VN V PG + T +     +    +  E    L  L D     R 
Sbjct: 181 IRVNGVGPGVIATSL-----VEMTIQDPEQKENLNKLIDRCALRRM 221

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  100 bits (251), Expect = 7e-26
 Identities = 48/256 (18%), Positives = 86/256 (33%), Gaps = 76/256 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG   G+G E V+ L  +G  V  +  +E  G +   +L          +F + D
Sbjct: 7   KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERS------MFVRHD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +S  A  + +   ++ + G L++L NNAGI           +            D+S++ 
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLE------------DFSRL- 107

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     LK N       C+  I  ++      ++N++S                  
Sbjct: 108 ----------LKINTESVFIGCQQGIAAMK-ETGGSIINMAS------------------ 138

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----P 242
                                   +++       + Y  SKA ++A TR  A        
Sbjct: 139 ------------------------VSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGY 174

Query: 243 KFCVNCVCPGFVKTDI 258
              VN + P  + T +
Sbjct: 175 AIRVNSIHPDGIYTPM 190

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 99.4 bits (247), Expect = 3e-25
 Identities = 55/258 (21%), Positives = 86/258 (33%), Gaps = 63/258 (24%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           K  +VTG N+GIG    R +A+ G  V +  R     +E  EK+ K  GV       +Q 
Sbjct: 10  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK---TKAYQC 66

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D+S+   V+     I    G +  L  NAG++ VK   +                     
Sbjct: 67  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATEL-------------------- 106

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
              T+E        N +G   TC A+  L         + ++S +S+             
Sbjct: 107 ---THEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSS------------- 150

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                +    ++         Y  SKA  +   + LA  +    
Sbjct: 151 ---------------------QIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAG 189

Query: 245 -CVNCVCPGFVKTDINFH 261
             VN + PG+V TD   H
Sbjct: 190 IRVNALSPGYVNTDQTAH 207

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 98.5 bits (245), Expect = 7e-25
 Identities = 51/256 (19%), Positives = 71/256 (27%), Gaps = 71/256 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG  KGIG   V + A  G  +   AR+E    E + K +  G     +     D
Sbjct: 9   KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ---VTGSVCD 65

Query: 67  ISDLASVSSLADFIKTQF-GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
            S       L   + + F GKLDIL NN G    K  +D  A+            D+S  
Sbjct: 66  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAE------------DFSFH 113

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                      + TN        +   P                                
Sbjct: 114 -----------ISTNLESAYHLSQLAHP-------------------------------- 130

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                      +             IA        S Y  +K  +N   R LA  +    
Sbjct: 131 ----------LLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDG 180

Query: 245 -CVNCVCPGFVKTDIN 259
              N V P  + T + 
Sbjct: 181 IRANAVAPAVIATPLA 196

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 98.1 bits (244), Expect = 7e-25
 Identities = 55/278 (19%), Positives = 82/278 (29%), Gaps = 76/278 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG   GIG     +   +G  V++T R    G +A + +         + F Q D
Sbjct: 7   KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQ----IQFFQHD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
            SD    + L D  +  FG +  L NNAGIA  K   +                      
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEE---------------------- 100

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP-RLVNLSSYVSALKDLPEKARAVLG 185
             T     + L  N  G        I  ++       ++N+SS                 
Sbjct: 101 -TTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSS----------------- 142

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY---- 241
                                    I      P   AY  SK  +   ++  A       
Sbjct: 143 -------------------------IEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKD 177

Query: 242 PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLAL 279
               VN V PG++KT       +   EE      K  +
Sbjct: 178 YDVRVNTVHPGYIKTP--LVDDLPGAEEAMSQRTKTPM 213

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.1 bits (244), Expect = 7e-25
 Identities = 54/279 (19%), Positives = 90/279 (32%), Gaps = 74/279 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  VVTG  +GIG   VR   + G  VV+  +DE  G    ++L  +       +F   D
Sbjct: 7   KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGA-------VFILCD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++    V +L      +FG+LD + NNAG        +             +   + ++ 
Sbjct: 60  VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEET-----------SAQGFRQL- 107

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                     L+ N  GT    +  +P L       ++N+SS                  
Sbjct: 108 ----------LELNLLGTYTLTKLALPYLR-KSQGNVINISS------------------ 138

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                   +        +  Y  +K  + A T+ LA     +  
Sbjct: 139 ------------------------LVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGV 174

Query: 245 CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG 283
            VNC+ PG + T +      L  +  A     +   P G
Sbjct: 175 RVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG 213

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 98.2 bits (244), Expect = 8e-25
 Identities = 43/258 (16%), Positives = 73/258 (28%), Gaps = 81/258 (31%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +   +  GIG +T R+L  + +   +     +    A+ +LKA       + FH  D
Sbjct: 6   KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN-PTALAELKAINPKVN-ITFHTYD 63

Query: 67  IS-DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           ++  +A    L   I  Q   +DIL N AGI                           + 
Sbjct: 64  VTVPVAESKKLLKKIFDQLKTVDILINGAGILDDH--------------------QIERT 103

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP---RLVNLSSYVSALKDLPEKARA 182
                      +  N+ G   T  A++   +         + N+ S              
Sbjct: 104 -----------IAINFTGLVNTTTAILDFWDKRKGGPGGIIANICS-------------- 138

Query: 183 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP 242
                                       +           Y  SKA + ++T  LAK  P
Sbjct: 139 ----------------------------VTGFNAIHQVPVYSASKAAVVSFTNSLAKLAP 170

Query: 243 KFC--VNCVCPGFVKTDI 258
                   + PG  +T +
Sbjct: 171 ITGVTAYSINPGITRTPL 188

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 97.5 bits (242), Expect = 9e-25
 Identities = 58/302 (19%), Positives = 90/302 (29%), Gaps = 83/302 (27%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKG-------ITVVLTARDEKRGLEAVEKLKASGVDPE 58
           K   ++TG+ KGIG     + A            +VL++R      +   + +A G   +
Sbjct: 1   KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTD 60

Query: 59  LLLFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDA 118
                  DISD+A V  L   I  ++G +D L NN                         
Sbjct: 61  ---TITADISDMADVRRLTTHIVERYGHIDCLVNN-----------------------AG 94

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
              +  +   T E     + TN  GT    +AL  L+E   S  +  ++           
Sbjct: 95  VGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFIT----------- 143

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
                                           +A      HSS Y +SK         + 
Sbjct: 144 -------------------------------SVAATKAFRHSSIYCMSKFGQRGLVETMR 172

Query: 239 KRYPKF--CVNCVCPGFVKTDIN------FHAGILSVEEGAESPVKLALLPDGGPTGRFF 290
               K    +  V PG V T +         A ++  E+ A   V+  L P         
Sbjct: 173 LYARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAYLQPSRTVVEEII 232

Query: 291 LR 292
           LR
Sbjct: 233 LR 234

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 97.8 bits (243), Expect = 2e-24
 Identities = 47/284 (16%), Positives = 85/284 (29%), Gaps = 68/284 (23%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  ++TG   G+G   V +  ++G  V +  +  +R  E       +      +L    D
Sbjct: 6   EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDN------VLGIVGD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +  L      A     +FGK+D L  NAGI         ++ +   + +   +  + +V 
Sbjct: 60  VRSLEDQKQAASRCVARFGKIDTLIPNAGIWD-------YSTALVDLPEESLDAAFDEV- 111

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                        N  G     +A +P L  S    +  +S+                  
Sbjct: 112 ----------FHINVKGYIHAVKACLPALVASRGNVIFTISNA----------------- 144

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-C 245
                                 G   N         Y  +K  I    R LA     +  
Sbjct: 145 ----------------------GFYPN----GGGPLYTAAKHAIVGLVRELAFELAPYVR 178

Query: 246 VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
           VN V  G + +D+   + +    +   +     +L    P GR 
Sbjct: 179 VNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRM 222

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 97.5 bits (242), Expect = 2e-24
 Identities = 54/286 (18%), Positives = 88/286 (30%), Gaps = 78/286 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
           K  V+TGS+ G+G     + A++   VV+  R ++    +V E++K  G +    +  + 
Sbjct: 8   KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE---AIAVKG 64

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           D++  + V +L      +FGKLD++ NNAG+ +     +                DW+KV
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLS------------DWNKV 112

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                         N  G        I                                 
Sbjct: 113 IDT-----------NLTGAFLGSREAIK-------------------------------- 129

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                      +             +  +   P    Y  SK  +   T  LA  Y    
Sbjct: 130 ---------YFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKG 180

Query: 245 -CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             VN + PG + T IN         E    P + A +    P G  
Sbjct: 181 IRVNNIGPGAINTPIN--------AEKFADPEQRADVESMIPMGYI 218

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 95.9 bits (238), Expect = 5e-24
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 4/99 (4%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG+  GIG E     A+ G +VV++  +       V++++  G         + D
Sbjct: 12  KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQA---FACRCD 68

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVK-FDMD 104
           I+    +S+LADF  ++ GK+DIL NNAG    K FDM 
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMP 107

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 95.4 bits (237), Expect = 2e-23
 Identities = 40/302 (13%), Positives = 73/302 (24%), Gaps = 85/302 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPEL---LLFH 63
           +  +VTG+  G+G       A +G  VV+                A  V  E+       
Sbjct: 8   RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA 67

Query: 64  QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWS 123
             +   + +   L       FG++D++ NNAGI   +       +            DW 
Sbjct: 68  VANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDE------------DWD 115

Query: 124 KVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAV 183
            +            + +  G+ Q   A    ++  +  R++  +S               
Sbjct: 116 IIQ-----------RVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS--------------- 149

Query: 184 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK 243
                                       +        + Y  +K  +      L     K
Sbjct: 150 ---------------------------ASGIYGNFGQANYSAAKLGLLGLANTLVIEGRK 182

Query: 244 FC--VNCVCPGFVKTDINFHAG-----ILSVEEGAESPVKLA----------LLPDGGPT 286
                N + P                  L  E  A   + L                G  
Sbjct: 183 NNIHCNTIAPNAGSRMTETVMPEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWI 242

Query: 287 GR 288
           G+
Sbjct: 243 GK 244

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 2e-23
 Identities = 58/290 (20%), Positives = 90/290 (31%), Gaps = 83/290 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+ +GIG      L  KG  V L   + + G++    L     +P+  LF Q D
Sbjct: 4   KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-EPQKTLFIQCD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++D   +      +   FG+LDIL NNAG+ +                    E +W K  
Sbjct: 63  VADQQQLRDTFRKVVDHFGRLDILVNNAGVNN--------------------EKNWEK-- 100

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLL---ELSDSPRLVNLSSYVSALKDLPEKARAV 183
                     L+ N           +  +      +   ++N+SS               
Sbjct: 101 ---------TLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA------------- 138

Query: 184 LGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI--LAKRY 241
                                    G +       + +    SK  I  +TR   LA   
Sbjct: 139 -------------------------GLMPVAQQPVYCA----SKHGIVGFTRSAALAANL 169

Query: 242 PKF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
                 +N +CPGFV T I     I   E   +       + D       
Sbjct: 170 MNSGVRLNAICPGFVNTAIL--ESIEKEENMGQYIEYKDHIKDMIKYYGI 217

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 94.4 bits (234), Expect = 2e-23
 Identities = 44/254 (17%), Positives = 73/254 (28%), Gaps = 68/254 (26%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TG   GIG  T +     G  VV+    +  G +    + +  V    + F   D
Sbjct: 7   KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV----ISFVHCD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++    V +L D    + GKLDI+  N G+ S                          + 
Sbjct: 63  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTT---------------------PYSIL 101

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
               E     +  N YG     +    ++  +    +V  +S  S               
Sbjct: 102 EAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSF-------------- 147

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                            S  Y  +K  +   T  L     ++  
Sbjct: 148 ---------------------------TAGEGVSHVYTATKHAVLGLTTSLCTELGEYGI 180

Query: 245 CVNCVCPGFVKTDI 258
            VNCV P  V + +
Sbjct: 181 RVNCVSPYIVASPL 194

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 93.2 bits (231), Expect = 5e-23
 Identities = 44/257 (17%), Positives = 83/257 (32%), Gaps = 70/257 (27%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+ +GIG E  + LA     V+  +R +K     V+++K+ G +      +  D
Sbjct: 11  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE---SSGYAGD 67

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +S    +S + + I T+   +                         +         +   
Sbjct: 68  VSKKEEISEVINKILTEHKNV-----------------------DILVNNAGITRDNLFL 104

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
               +   + L+TN        + +   +  +   R++N+SS                  
Sbjct: 105 RMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISS------------------ 146

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC- 245
                                   I         + Y  SKA +  +T+ LAK       
Sbjct: 147 ------------------------IVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNI 182

Query: 246 -VNCVCPGFVKTDINFH 261
            VN + PGF+ +D+   
Sbjct: 183 TVNAIAPGFISSDMTDK 199

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 92.4 bits (229), Expect = 8e-23
 Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 4/95 (4%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL-KASGVDPELLLFHQL 65
           + A+VTG ++G+GF   + LA  G +VV+ +R+ +   EA +KL +  GV+    +  + 
Sbjct: 6   RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE---TMAFRC 62

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVK 100
           D+S+   V  L + +K +FGKLD + N AGI    
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRH 97

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 10/79 (12%)

Query: 213 NRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILSVEEG 270
                P+ SAY  SK  + + T+ LAK + ++   VN + PG+ +T +         E  
Sbjct: 146 EEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM--------TEAV 197

Query: 271 AESPVKLALLPDGGPTGRF 289
              P KL  +    P GR 
Sbjct: 198 FSDPEKLDYMLKRIPLGRT 216

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 92.4 bits (229), Expect = 1e-22
 Identities = 29/98 (29%), Positives = 49/98 (50%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TGS+ GIG       A +G  V +T R+E R  E  +++  +GV  E +     D
Sbjct: 5   KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVAD 64

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMD 104
           +++ +    + +    +FGK+DIL NNAG        +
Sbjct: 65  VTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTAN 102

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 51.6 bits (123), Expect = 3e-08
 Identities = 19/81 (23%), Positives = 27/81 (33%), Gaps = 3/81 (3%)

Query: 211 IANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILSVE 268
           +A          Y  +KA ++ YTR  A    +    VN V PG V T     A  L   
Sbjct: 146 VAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF-MGAMGLPET 204

Query: 269 EGAESPVKLALLPDGGPTGRF 289
              +    +    +  P G  
Sbjct: 205 ASDKLYSFIGSRKECIPVGHC 225

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 91.8 bits (227), Expect = 2e-22
 Identities = 42/292 (14%), Positives = 76/292 (26%), Gaps = 73/292 (25%)

Query: 5   TKKYAVVTGSNKGIGFETVRQLA---SKGITVVLTARDEKRGLEAVEKLKASGVDPELLL 61
                V+TG+++G G     QLA   S G  ++++AR E    +  E+L A   D + ++
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK-VV 63

Query: 62  FHQLDISDLASVSS----LADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGD 117
               D+   A V      + +  + +  +  +L NNA              S   +   D
Sbjct: 64  LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNA--------ATLGDVSKGFLNVND 115

Query: 118 AEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLP 177
              + +                N           +                         
Sbjct: 116 LA-EVNNY-----------WALNLTSMLCLTSGTLNAF---------------------- 141

Query: 178 EKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL 237
                             +              +           Y   KA  +   ++L
Sbjct: 142 ------------------QDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVL 183

Query: 238 AKRYPKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
           A   P   V    PG +  D+   A      E ++ P   + L      G  
Sbjct: 184 AAEEPSVRVLSYAPGPLDNDMQQLAR-----ETSKDPELRSKLQKLKSDGAL 230

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 91.6 bits (227), Expect = 2e-22
 Identities = 46/285 (16%), Positives = 81/285 (28%), Gaps = 85/285 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             A+VTG+ KGIG +TV+ L + G  VV   R     +   ++          +    +D
Sbjct: 6   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG-------IEPVCVD 58

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           + D  +            G +D+L NNA +  ++  ++                      
Sbjct: 59  LGDWDATEKALG----GIGPVDLLVNNAALVIMQPFLEV--------------------- 93

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
             T E        N     Q  + +                             R V G 
Sbjct: 94  --TKEAFDRSFSVNLRSVFQVSQMVAR-----------------------DMINRGVPGS 128

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV 246
           + N                     +      P+   Y  +K  +   T+ +A       +
Sbjct: 129 IVN------------------VSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKI 170

Query: 247 --NCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             N V P  V TD+         ++ +  P     L +  P  +F
Sbjct: 171 RVNSVNPTVVLTDMG--------KKVSADPEFARKLKERHPLRKF 207

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 91.7 bits (226), Expect = 2e-22
 Identities = 46/291 (15%), Positives = 91/291 (31%), Gaps = 61/291 (20%)

Query: 7   KYAVVTGSNKGIGFETVRQL---ASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFH 63
              ++TG N+G+G   V+ L         +  T R+ ++  + +E L  +  +   +   
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQ-AKELEDLAKNHSN---IHIL 58

Query: 64  QLDISDLASVSS--LADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVD 121
           ++D+ +  +           T+   L++L NNAGI                         
Sbjct: 59  EIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGI----------------------APK 96

Query: 122 WSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKAR 181
            +++     +  ++ L+TN        +A +PLL+ +                       
Sbjct: 97  SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQ---------------- 140

Query: 182 AVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY 241
                        + +                        AY+ SK+ +NA T+ L+   
Sbjct: 141 ------------PMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDL 188

Query: 242 PKF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFF 290
                    + PG+VKTD+   +  L V       V+          G F 
Sbjct: 189 YPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFV 239

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 89.7 bits (222), Expect = 9e-22
 Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 9/104 (8%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
           A+VT      G  +  +L+  G TV       K+  + +E    +        + QL   
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQ-KDELEAFAET--------YPQLKPM 53

Query: 69  DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQ 112
                + L + + + +G++D+L +N   A     +D +A   Y+
Sbjct: 54  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYR 97

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 12/80 (15%), Positives = 26/80 (32%), Gaps = 4/80 (5%)

Query: 212 ANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILSVEE 269
              G     S Y  ++A        L+K   ++   V  + P ++ ++ +        E 
Sbjct: 133 TPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDS--PYFYPTEP 190

Query: 270 GAESPVKLALLPDGGPTGRF 289
              +P  +A +       R 
Sbjct: 191 WKTNPEHVAHVKKVTALQRL 210

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.3 bits (221), Expect = 1e-21
 Identities = 45/285 (15%), Positives = 85/285 (29%), Gaps = 85/285 (29%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +VTG+ KGIG  TV+ L + G  VV  +R +      V +          +    +D
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-------IEPVCVD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           + D  +            G +D+L NNA +A ++  ++   +             + +  
Sbjct: 61  LGDWEATERALG----SVGPVDLLVNNAAVALLQPFLEVTKE------------AFDRS- 103

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                      + N     Q  + +   L     P  +   S   + +            
Sbjct: 104 ----------FEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR------------ 141

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC- 245
                                           + S Y  +K  ++  T+++A        
Sbjct: 142 -----------------------------AVTNHSVYCSTKGALDMLTKVMALELGPHKI 172

Query: 246 -VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
            VN V P  V T +         +     P K   + +  P G+F
Sbjct: 173 RVNAVNPTVVMTSMG--------QATWSDPHKAKTMLNRIPLGKF 209

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 87.0 bits (215), Expect = 7e-21
 Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 8/98 (8%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  ++TG+  GIG  T+   A +G  +V    +E    EA E + A  V         +D
Sbjct: 6   KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPV--------VMD 57

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMD 104
           ++D ASV           G+LD + + AGI    F   
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWK 95

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 41.9 bits (98), Expect = 4e-05
 Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 3/65 (4%)

Query: 197 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFV 254
           M  K+             G    +  Y  S A +   TR LA    ++   VN + PGF+
Sbjct: 123 MREKNPGSIVLTASRVYLGNLGQA-NYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFI 181

Query: 255 KTDIN 259
           +T + 
Sbjct: 182 ETRMT 186

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 87.1 bits (215), Expect = 9e-21
 Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 1/108 (0%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  ++TG   G+G  T  +LA++G  + L     +    +   +  +  D E +L    D
Sbjct: 5   RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAE-VLTTVAD 63

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQIT 114
           +SD A V +       +FG++D   NNAGI   +   ++F  + +   
Sbjct: 64  VSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKV 111

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 38.6 bits (89), Expect = 5e-04
 Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 4/81 (4%)

Query: 211 IANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILSVE 268
           +       + S Y  +K  +   TR  A  Y ++   +N + PG + T        +   
Sbjct: 144 VGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTP--MVENSMKQL 201

Query: 269 EGAESPVKLALLPDGGPTGRF 289
           +               P+ R+
Sbjct: 202 DPENPRKAAEEFIQVNPSKRY 222

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 85.1 bits (210), Expect = 3e-20
 Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 6/98 (6%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+V+G  +G+G   VR + ++G  VV     ++ G     +L  +        +  LD
Sbjct: 7   KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAA------RYVHLD 60

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMD 104
           ++  A   +  D   T FG L +L NNAGI ++    D
Sbjct: 61  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIED 98

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 43.9 bits (103), Expect = 9e-06
 Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 6/69 (8%)

Query: 216 WCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILSVEEGAES 273
                  Y  +K  +   T+  A         VN + PG VKT +         E+  ++
Sbjct: 145 GTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVP----EDIFQT 200

Query: 274 PVKLALLPD 282
            +  A  P 
Sbjct: 201 ALGRAAEPV 209

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.6 bits (211), Expect = 4e-20
 Identities = 49/288 (17%), Positives = 84/288 (29%), Gaps = 73/288 (25%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG++KGIG E    LA  G  VV+TAR ++   + V      G       +    
Sbjct: 15  KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS--AHYIAGT 72

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           + D+              G LD+L  N                               + 
Sbjct: 73  MEDMTFAEQFVAQAGKLMGGLDMLILNHITN-----------------------TSLNLF 109

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
           +       + ++ N+        A +P+L+ S+                           
Sbjct: 110 HDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNG-------------------------- 143

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                   I +V            +A +   P  +AY  SK  ++ +   + K Y     
Sbjct: 144 -------SIVVV----------SSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRV 186

Query: 245 --CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLAL-LPDGGPTGRF 289
              +     G + T+    A    V   A    + AL +  GG   + 
Sbjct: 187 NVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQE 234

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 85.2 bits (210), Expect = 5e-20
 Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 3/99 (3%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           KK A+VTG+ +GIG     +L   G  V +   ++        ++  +G      +  ++
Sbjct: 1   KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHA---VAVKV 57

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMD 104
           D+SD   V +  +  +   G  D++ NNAG+A       
Sbjct: 58  DVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIES 96

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 37.1 bits (85), Expect = 0.001
 Identities = 20/81 (24%), Positives = 25/81 (30%), Gaps = 3/81 (3%)

Query: 212 ANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILSVE- 268
           A     P  + Y  SK  +   T+  A+        VN  CPG VKT +         E 
Sbjct: 140 AGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEA 199

Query: 269 EGAESPVKLALLPDGGPTGRF 289
            G       A        GR 
Sbjct: 200 AGKPLGYGTAEFAKRITLGRL 220

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 83.0 bits (204), Expect = 3e-19
 Identities = 43/254 (16%), Positives = 65/254 (25%), Gaps = 54/254 (21%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA-VEKLKASGVDPELLLFHQL-- 65
           AV+TG  + IG     +L  +G  VV+  R  +   +  V +L A+     +L    L  
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 63

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
             S L     + D     FG+ D+L NNA      +               DA+   ++V
Sbjct: 64  SSSLLDCCEDIIDCSFRAFGRCDVLVNNASA----YYPTPLLPGDDTNGAADAKPIDAQV 119

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                    E   +N         A                                   
Sbjct: 120 A--------ELFGSNAVAPLFLIRAFARRQ------------------------------ 141

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF- 244
                                   +       P    Y ++K  +   TR  A       
Sbjct: 142 -------GEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRH 194

Query: 245 -CVNCVCPGFVKTD 257
             VN V PG     
Sbjct: 195 IRVNAVAPGLSLLP 208

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 82.4 bits (203), Expect = 3e-19
 Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 6/107 (5%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG+  GIG   +   A +G ++V   R+E+   EAV  L+A  +          D
Sbjct: 6   KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAI------AVVAD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQI 113
           +SD  +V ++      +FG+L  +A+ AG+A      +   ++  ++
Sbjct: 60  VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKV 106

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 38.5 bits (89), Expect = 5e-04
 Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 2/46 (4%)

Query: 216 WCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDIN 259
                + Y   K  +    R LA    +    VN + PG ++T + 
Sbjct: 141 GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMT 186

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 82.5 bits (203), Expect = 5e-19
 Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 3/89 (3%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          + A+VTG+  GIG E  R+L  +G+ V + AR E+     +++L+ +GV+         D
Sbjct: 3  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE---ADGRTCD 59

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNAG 95
          +  +  + +L   +  ++G +D+L NNAG
Sbjct: 60 VRSVPEIEALVAAVVERYGPVDVLVNNAG 88

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 49.0 bits (116), Expect = 2e-07
 Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 3/96 (3%)

Query: 197 MVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFV 254
           M+ +   +         +    H++ Y  SK  +  +T+ L     +    VN VCPGFV
Sbjct: 127 MLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFV 186

Query: 255 KTDINFHA-GILSVEEGAESPVKLALLPDGGPTGRF 289
           +T +        S      +      +    P GR+
Sbjct: 187 ETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRY 222

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.2 bits (202), Expect = 7e-19
 Identities = 48/296 (16%), Positives = 81/296 (27%), Gaps = 80/296 (27%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKG---ITVVLTARDEKRGLEAVEKLKASGVDPELLLF 62
           +   ++TG + GIG     +LAS       V  T RD K      E  +A    P  L  
Sbjct: 2   RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLET 61

Query: 63  HQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDW 122
            QLD+ D  SV++  + +                                +         
Sbjct: 62  LQLDVRDSKSVAAARERVTEGR-------------------------VDVLVCNAGLGLL 96

Query: 123 SKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARA 182
             +     +     L  N  GT +  +A +P ++   S R++   S              
Sbjct: 97  GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGS-------------- 142

Query: 183 VLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP 242
                                       +      P +  Y  SK  +      LA    
Sbjct: 143 ----------------------------VGGLMGLPFNDVYCASKFALEGLCESLAVLLL 174

Query: 243 KF--CVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEA 296
            F   ++ +  G V T          +E+   SP ++    D     RF+     +
Sbjct: 175 PFGVHLSLIECGPVHTAF--------MEKVLGSPEEVLDRTDIHTFHRFYQYLAHS 222

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 81.0 bits (199), Expect = 1e-18
 Identities = 53/255 (20%), Positives = 96/255 (37%), Gaps = 73/255 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A+VTG+++GIG      LA++G  V+ TA  E       + L A+G          L+
Sbjct: 5   KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK------GLMLN 58

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++D AS+ S+ + I+ +FG++DIL NNAGI                          + + 
Sbjct: 59  VTDPASIESVLEKIRAEFGEVDILVNNAGI-----------------------TRDNLLM 95

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
               E   + ++TN     +  +A++  +      R++ + S                  
Sbjct: 96  RMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGS------------------ 137

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF-- 244
                                   +         + Y  +KA +  +++ LA+       
Sbjct: 138 ------------------------VVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGI 173

Query: 245 CVNCVCPGFVKTDIN 259
            VN V PGF++TD+ 
Sbjct: 174 TVNVVAPGFIETDMT 188

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.3 bits (200), Expect = 2e-18
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPE--LLLFHQ 64
           + A+VTG   GIG   V++L   G  VV+ +R  +R   A ++L+A+    +   ++  Q
Sbjct: 13  QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQ 72

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIA 97
            +I +   V++L       FGK++ L NN G  
Sbjct: 73  CNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQ 105

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 5e-05
 Identities = 14/103 (13%), Positives = 32/103 (31%), Gaps = 8/103 (7%)

Query: 189 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--V 246
            + +      +K++        +  +   P +     ++A +   T+ LA  +      +
Sbjct: 131 YMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRI 190

Query: 247 NCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
           NCV PG + +           +   E   +        P  R 
Sbjct: 191 NCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI------PAKRI 227

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 80.2 bits (197), Expect = 3e-18
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 4/89 (4%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
            A+VTG +KGIG+  V +LA  G  V   +R+EK   E +E  +  G++ E       D
Sbjct: 7  TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVE---GSVCD 63

Query: 67 ISDLASVSSLADFIKTQF-GKLDILANNA 94
          +        L   +   F GKL+IL NNA
Sbjct: 64 LLSRTERDKLMQTVAHVFDGKLNILVNNA 92

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 39.3 bits (91), Expect = 3e-04
 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 211 IANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDI 258
           IA     P  S Y  SK  IN  T+ LA  + K    VN V PG + T +
Sbjct: 144 IAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL 193

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 79.4 bits (195), Expect = 5e-18
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 4/103 (3%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
           K A+ TG+ +GIG     +L  +G +VV+      +  E V  +LK  G      +  Q 
Sbjct: 7   KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ---GVAIQA 63

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFAD 108
           DIS  + V +L D   + FG LD + +N+G+     +++   +
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQE 106

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 39.3 bits (91), Expect = 3e-04
 Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 5/83 (6%)

Query: 212 ANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC--VNCVCPGFVKTDI---NFHAGILS 266
           A     P+ + Y  SKA +  + R  A         VNC+ PG VKTD+   N       
Sbjct: 144 AVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPG 203

Query: 267 VEEGAESPVKLALLPDGGPTGRF 289
             +G         L +  P  R 
Sbjct: 204 GYKGMPQEKIDEGLANMNPLKRI 226

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 77.9 bits (191), Expect = 2e-17
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 4/92 (4%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLLFHQL 65
           K A+VTG+ +GIG E   +L  +G  V++   +     E V   +K +G D       + 
Sbjct: 19  KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD---AACVKA 75

Query: 66  DISDLASVSSLADFIKTQFGKLDILANNAGIA 97
           ++  +  +  + +     FGKLDI+ +N+G+ 
Sbjct: 76  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVV 107

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 44.7 bits (105), Expect = 5e-06
 Identities = 20/83 (24%), Positives = 27/83 (32%), Gaps = 5/83 (6%)

Query: 212 ANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDIN---FHAGILS 266
                 P  + Y  SK  I  + R +A         VN V PG +KTD+        I +
Sbjct: 156 GQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPN 215

Query: 267 VEEGAESPVKLALLPDGGPTGRF 289
            E  +   V         P  R 
Sbjct: 216 GENLSNEEVDEYAAVQWSPLRRV 238

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 77.1 bits (189), Expect = 3e-17
 Identities = 42/254 (16%), Positives = 83/254 (32%), Gaps = 71/254 (27%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLT-ARDEKRGLEAVEKLKASGVDPELLLFHQLDI 67
            VVTG+++GIG      L   G  V++  AR  K   E  ++++A G      +    D+
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQA---ITFGGDV 60

Query: 68  SDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCY 127
           S  A V ++       +G +D++            ++    +   +     +  W +V  
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVV------------VNNAGITRDTLLIRMKKSQWDEVID 108

Query: 128 QTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV 187
                       N  G     +A   ++      R++N++S                   
Sbjct: 109 L-----------NLTGVFLCTQAATKIMMKKRKGRIINIAS------------------- 138

Query: 188 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--C 245
                                  +         + Y  +KA +  +++  A+        
Sbjct: 139 -----------------------VVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNIN 175

Query: 246 VNCVCPGFVKTDIN 259
           VN VCPGF+ +D+ 
Sbjct: 176 VNVVCPGFIASDMT 189

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 76.0 bits (186), Expect = 9e-17
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 3/106 (2%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG+   IG  T  +LA +G  + L   + +   +A   ++  GV+      +  D
Sbjct: 6   KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE---ARSYVCD 62

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQ 112
           ++   +V    D +   FGK+D L NNAG       +  +    + 
Sbjct: 63  VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFA 108

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 44.4 bits (104), Expect = 5e-06
 Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 8/87 (9%)

Query: 211 IANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTD------INFHA 262
           +A     P+ +AY  SK  I A T   A     +   VN + PG++         +   A
Sbjct: 143 MAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQA 202

Query: 263 GILSVEEGAESPVKLALLPDGGPTGRF 289
            + S     +  V    +    P  R+
Sbjct: 203 KVGSQYFSTDPKVVAQQMIGSVPMRRY 229

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 74.8 bits (183), Expect = 2e-16
 Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 1/124 (0%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K AVVTGS  GIG      LA++G  +VL    +   +E V    A+    + +L+   D
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK-VLYDGAD 63

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           +S   +V  L D    Q G++DIL NNAGI       D   +    I   +    +    
Sbjct: 64  LSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTA 123

Query: 127 YQTY 130
               
Sbjct: 124 AALP 127

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 46.3 bits (109), Expect = 1e-06
 Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 4/83 (4%)

Query: 211 IANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDI--NFHAGILS 266
                   + SAY  +K  +  +T++ A          N +CPG+V+T +     + +  
Sbjct: 143 AHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAE 202

Query: 267 VEEGAESPVKLALLPDGGPTGRF 289
                +      LL +  P+ +F
Sbjct: 203 KNGVDQETAARELLSEKQPSLQF 225

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.6 bits (180), Expect = 5e-16
 Identities = 49/293 (16%), Positives = 82/293 (27%), Gaps = 86/293 (29%)

Query: 1   MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELL 60
           M     K  ++T + +GIG       A +G  V+ T  +E +  E  +         +  
Sbjct: 1   MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLD-- 58

Query: 61  LFHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSGYQITKGDA 118
                      +     D    +  +LD+L N AG        D +              
Sbjct: 59  ----------VTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCE-------------- 94

Query: 119 EVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPE 178
           E DW              +  N        +A +P +    S  ++N+SS  S++K    
Sbjct: 95  EKDWDFS-----------MNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK---- 139

Query: 179 KARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA 238
                                                   +   Y  +KA +   T+ +A
Sbjct: 140 -------------------------------------GVVNRCVYSTTKAAVIGLTKSVA 162

Query: 239 KRYPKFC--VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
             + +     NCVCPG V T          ++                 TGRF
Sbjct: 163 ADFIQQGIRCNCVCPGTVDTPSLQER----IQARGNPEEARNDFLKRQKTGRF 211

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 73.7 bits (180), Expect = 6e-16
 Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 6/98 (6%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A++TGS +GIG         +G  V +   + +       ++  +           LD
Sbjct: 6   KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAAC------AIALD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMD 104
           ++D AS+      +  ++G +DIL NNA +  +   ++
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVE 97

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 74.0 bits (181), Expect = 7e-16
 Identities = 26/142 (18%), Positives = 51/142 (35%), Gaps = 6/142 (4%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K A +TG   G+G      L+S G   V+ +R         E++ +   +   +   Q D
Sbjct: 26  KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNK--VHAIQCD 83

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           + D   V +    +    G  +I+ NNA    +        ++   IT     +  +   
Sbjct: 84  VRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITD----IVLNGTA 139

Query: 127 YQTYELAVECLKTNYYGTKQTC 148
           + T E+  + +K        + 
Sbjct: 140 FVTLEIGKQLIKAQKGAAFLSI 161

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 2e-04
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 211 IANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFH 261
           I              +KA + A ++ LA  + K+    N + PG +KT   F 
Sbjct: 164 IYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS 216

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 69.5 bits (169), Expect = 2e-14
 Identities = 46/259 (17%), Positives = 77/259 (29%), Gaps = 71/259 (27%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K A+V G  + + +GF    +L   G  V L+ + E+   EA +  +A G         +
Sbjct: 9   KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGAL----LFR 64

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            D++    + +L   +K  FG LD L +    A  +     + D            DW  
Sbjct: 65  ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYID--------TRRQDWLL 116

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
                        + + Y          PLL   +   +V L+                 
Sbjct: 117 AL-----------EVSAYSLVAVARRAEPLLR--EGGGIVTLTY---------------- 147

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                      A+    P  +   ++KA + A  R LA      
Sbjct: 148 --------------------------YASEKVVPKYNVMAIAKAALEASVRYLAYELGPK 181

Query: 245 C--VNCVCPGFVKTDINFH 261
              VN +  G V+T     
Sbjct: 182 GVRVNAISAGPVRTVAARS 200

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 69.2 bits (168), Expect = 3e-14
 Identities = 42/259 (16%), Positives = 76/259 (29%), Gaps = 70/259 (27%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K  +VTG  S   I +   + +  +G  +  T +++K      E     G D       Q
Sbjct: 6   KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI----VLQ 61

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
            D+++ AS+ ++   +   + K D   ++ G A                     ++D   
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFA------------------PGDQLDGDY 103

Query: 125 VCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVL 184
           V   T E        + Y      +A      L+    L+ LS                 
Sbjct: 104 VNAVTREGFKIAHDISSYSFVAMAKACRS--MLNPGSALLTLSYLG-------------- 147

Query: 185 GDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF 244
                                      A R   P+ +   ++KA + A  R +A      
Sbjct: 148 ---------------------------AERAI-PNYNVMGLAKASLEANVRYMANAMGPE 179

Query: 245 CV--NCVCPGFVKTDINFH 261
            V  N +  G ++T     
Sbjct: 180 GVRVNAISAGPIRTLAASG 198

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 67.6 bits (164), Expect = 7e-14
 Identities = 39/284 (13%), Positives = 64/284 (22%), Gaps = 70/284 (24%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
              V++G   GIG  T + L + G  +V     +        ++ A             D
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD-------AEVIA-------------D 41

Query: 67  ISDLASVSSL-ADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKV 125
           +S         AD +      +D L   AG+      +       Y       +     +
Sbjct: 42  LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPAL 101

Query: 126 CYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLG 185
                  AV                L   LE   +       + V               
Sbjct: 102 KKGHQPAAVVISSVASAHLAFDKNPLALALE---AGEEAKARAIV--------------- 143

Query: 186 DVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC 245
                                      + G    + AY  SK  +    R  A  + +  
Sbjct: 144 --------------------------EHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAG 177

Query: 246 VNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRF 289
           V         T+       L      E     ++     P GR 
Sbjct: 178 VRLNTIAPGATETPLLQAGLQDPRYGE-----SIAKFVPPMGRR 216

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 66.2 bits (161), Expect = 2e-13
 Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 18/102 (17%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +V  +++GIG      L+ +G  V + AR+E       E LK SG        H+  
Sbjct: 5   KGVLVLAASRGIGRAVADVLSQEGAEVTICARNE-------ELLKRSG--------HRYV 49

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFAD 108
           + D   +    D +  +  ++DIL  NAG     F  +   +
Sbjct: 50  VCD---LRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNE 88

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 11/81 (13%)

Query: 211 IANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF--CVNCVCPGFVKTDINFHAGILSVE 268
            +      +      ++  +  + + L+     +   VNCV PG+ +T+           
Sbjct: 126 FSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERV--------- 176

Query: 269 EGAESPVKLALLPDGGPTGRF 289
           +   S  K   +    P  R 
Sbjct: 177 KELLSEEKKKQVESQIPMRRM 197

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 65.9 bits (160), Expect = 3e-13
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 14/88 (15%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
          +  +VTG N+GIG    ++LA+ G  V +T R            K        L   ++D
Sbjct: 8  RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS-------GAPKG-------LFGVEVD 53

Query: 67 ISDLASVSSLADFIKTQFGKLDILANNA 94
          ++D  +V      ++   G +++L +NA
Sbjct: 54 VTDSDAVDRAFTAVEEHQGPVEVLVSNA 81

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 65.8 bits (159), Expect = 4e-13
 Identities = 23/135 (17%), Positives = 41/135 (30%), Gaps = 18/135 (13%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV-EKLKASGVDPELLL------ 61
           A+VTG+ K +G      L ++G  V L          A+   L A   +  + +      
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 62  ---------FHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVK--FDMDAFADSG 110
                         ++     + L     T +G+ D+L NNA           D      
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 124

Query: 111 YQITKGDAEVDWSKV 125
               +   E   + +
Sbjct: 125 CVGDREAMETATADL 139

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 61.0 bits (147), Expect = 1e-11
 Identities = 30/291 (10%), Positives = 61/291 (20%), Gaps = 89/291 (30%)

Query: 9   AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS 68
            +V G    +G   +      G TV+          ++   +               + +
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDG-------------NKN 51

Query: 69  DLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQ 128
                 S+ +   +      +              D           G A          
Sbjct: 52  WTEQEQSILEQTASSLQGSQV--------------DGVFCVAGGWAGGSASSKDFVKNAD 97

Query: 129 TYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVE 188
                   +K + + +    +       L     L    +                    
Sbjct: 98  L------MIKQSVWSSAIAAKLATT--HLKPGGLLQLTGA-------------------- 129

Query: 189 NLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKF 244
                                  A  G  P    Y ++KA ++  T  LA +        
Sbjct: 130 ----------------------AAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNS 167

Query: 245 CVNCVCPGFVKTDINFHA-------GILSVEEGAESPVKLALLPDGGP-TG 287
            V  + P  + T +N              +   +E  +K        P +G
Sbjct: 168 AVLTIMPVTLDTPMNRKWMPNADHSSWTPLSFISEHLLKWTTETSSRPSSG 218

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.1 bits (137), Expect = 2e-10
 Identities = 13/108 (12%), Positives = 27/108 (25%), Gaps = 15/108 (13%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           +  +V G    +G   V+   ++   V      E     A              +  ++ 
Sbjct: 3   RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASAS-------------VIVKMT 49

Query: 67  ISDLASVSSLADFIKTQFG--KLDILANNAGIASVKFDMDAFADSGYQ 112
            S       +   +    G  K+D +   AG  +              
Sbjct: 50  DSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCD 97

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.6 bits (94), Expect = 1e-04
 Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 4/58 (6%)

Query: 209 GEIANRGWCPHSSAYKVSKAVINAYTRILAKRY----PKFCVNCVCPGFVKTDINFHA 262
           G  A     P    Y ++K  ++   + LA +            V P  + T +N  +
Sbjct: 128 GAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKS 185

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 56.6 bits (135), Expect = 5e-10
 Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 6/126 (4%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
           K  ++ G  +NK I +   +   ++G T+  T  +E    + V  +      P     ++
Sbjct: 6   KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSP---YVYE 61

Query: 65  LDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK 124
           LD+S      SL + +K   G LD + ++   A  +    +  ++         E+    
Sbjct: 62  LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYS 121

Query: 125 VCYQTY 130
           +   T 
Sbjct: 122 LIELTN 127

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 2e-09
 Identities = 14/44 (31%), Positives = 20/44 (45%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL 50
            AV+TG   G+G  T  +L  +G + VL       G    +KL
Sbjct: 6  LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL 49

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 0.001
 Identities = 14/71 (19%), Positives = 23/71 (32%), Gaps = 8/71 (11%)

Query: 197 MVVKDYFKDYEEGEIANRGWC------PHSSAYKVSKAVINAYTRILAKRYPKFCVNC-- 248
           M   +  +  + G I N             +AY  SK  I   T  +A+      +    
Sbjct: 131 MGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMT 190

Query: 249 VCPGFVKTDIN 259
           + PG   T + 
Sbjct: 191 IAPGLFGTPLL 201

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 53.7 bits (128), Expect = 4e-09
 Identities = 36/257 (14%), Positives = 69/257 (26%), Gaps = 73/257 (28%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           + A+VTG   G+G      L ++G  VV+     + G + +              + + D
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GEDLI--------------YVEGD 46

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           ++    V       + +   L  + + AG+   +  +      G +  +   EV+     
Sbjct: 47  VTREEDVRRAVARAQ-EEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTF 105

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
                 A    +       Q                +VN +S                  
Sbjct: 106 NVLRLAAWAMRENPPDAEGQRG-------------VIVNTAS------------------ 134

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV 246
                                   +A        +AY  SK  + A T   A+    + +
Sbjct: 135 ------------------------VAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 170

Query: 247 --NCVCPGFVKTDINFH 261
               V PG   T +   
Sbjct: 171 RVVTVAPGLFDTPLLQG 187

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 52.6 bits (124), Expect = 1e-08
 Identities = 13/123 (10%), Positives = 40/123 (32%), Gaps = 31/123 (25%)

Query: 6   KKYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLE------------------ 45
           +    + G     G G+   ++L+ + + ++         +                   
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 46  -----------AVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLDILANNA 94
                            A+ +D E     + ++    ++  +A+ I  ++GK+++L ++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 95  GIA 97
             A
Sbjct: 122 ANA 124

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 52.1 bits (123), Expect = 2e-08
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 7  KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL 50
          K  +V+G  ++  I F   R    +G  +VLT  D  R ++ +   
Sbjct: 7  KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR 52

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 50.4 bits (119), Expect = 4e-08
 Identities = 10/51 (19%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDP 57
          + A++ G+   +G     +LA+ G  +V+ +R E++      + +    D 
Sbjct: 2  RVALLGGT-GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDA 51

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 48.6 bits (114), Expect = 3e-07
 Identities = 21/118 (17%), Positives = 39/118 (33%), Gaps = 31/118 (26%)

Query: 7   KYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAV----EKLKASGVDPELL 60
           K A + G   + G G+   + LA+ G  +++        +        K   S V P+  
Sbjct: 9   KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGS 68

Query: 61  LFH-------------------------QLDISDLASVSSLADFIKTQFGKLDILANN 93
           L                           +   S   +V   A+ ++  FG +DIL ++
Sbjct: 69  LMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHS 126

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 43.5 bits (101), Expect = 1e-05
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 9  AVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKA 52
           +VTG   G+G +  R LA +G   ++L +R       A E +  
Sbjct: 12 VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAE 56

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 43.3 bits (100), Expect = 2e-05
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 7  KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
             +VTG+N  +    V QL   G  V  TAR   + L  ++K   +            D
Sbjct: 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASK-LANLQKRWDAKYPGRFETAVVED 70

Query: 67 ISD 69
          +  
Sbjct: 71 MLK 73

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.7 bits (99), Expect = 3e-05
 Identities = 38/241 (15%), Positives = 78/241 (32%), Gaps = 19/241 (7%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K  +VTG    IG  TV +L   G   V+         ++V +L+   +    + F+++D
Sbjct: 2   KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEV--LTKHHIPFYEVD 59

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVC 126
           + D   +  +      +  K+D + + AG+ +V           +    G   +      
Sbjct: 60  LCDRKGLEKV-----FKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQ 114

Query: 127 YQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGD 186
           Y   +  V       YG       +IP+ E       +  ++     K   E     L +
Sbjct: 115 YNVSKF-VFSSSATVYGDATRFPNMIPIPE----ECPLGPTNPYGHTKYAIENILNDLYN 169

Query: 187 VENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV 246
            +    +  +  +  YF           G  P      +   ++    ++   R  K  +
Sbjct: 170 SDK---KSWKFAILRYFNPIGAHPSGLIGEDPLG----IPNNLLPYMAQVAVGRREKLYI 222

Query: 247 N 247
            
Sbjct: 223 F 223

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 39.8 bits (91), Expect = 2e-04
 Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 4/68 (5%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
           K   VTG     G      L + G TV   +          E  +      + +     
Sbjct: 8  GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR----VADGMQSEIG 63

Query: 66 DISDLASV 73
          DI D   +
Sbjct: 64 DIRDQNKL 71

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 39.2 bits (90), Expect = 4e-04
 Identities = 15/68 (22%), Positives = 21/68 (30%), Gaps = 6/68 (8%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQL 65
          KK   V G+    G   +R  A+ G  V       K  L A E      V        Q 
Sbjct: 3  KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG-LIAEELQAIPNVT-----LFQG 56

Query: 66 DISDLASV 73
           + +   +
Sbjct: 57 PLLNNVPL 64

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 38.4 bits (88), Expect = 6e-04
 Identities = 41/286 (14%), Positives = 76/286 (26%), Gaps = 31/286 (10%)

Query: 11  VTGSNKGIGFETVRQLASKGITVVLTARDE---KRGLEAVEKLKASGVDPELLLFHQLDI 67
           VTG    IG   V  + +    V +T  D+         +E +    V+         DI
Sbjct: 7   VTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVE-----LVVGDI 61

Query: 68  SDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCY 127
           +D   V    D +  +   +   A  +   +   D   F  + +  T    E        
Sbjct: 62  ADAELV----DKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIR 117

Query: 128 QTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDV 187
             +    E                 P  + +        S Y S       KA +     
Sbjct: 118 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSST------KAAS----- 166

Query: 188 ENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCVN 247
                   +++VK + + +      +     +     + K +    T ILA   PK    
Sbjct: 167 --------DLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGE 218

Query: 248 CVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRK 293
                      +   G+ ++           +  DG    +  L  
Sbjct: 219 GKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLEL 264

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (86), Expect = 7e-04
 Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 4  ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR 42
          A KK   + G+    G  T+ Q    G  V +  RD  R
Sbjct: 2  AVKKI-AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR 39

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 37.6 bits (86), Expect = 0.001
 Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 7/94 (7%)

Query: 11  VTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL 70
           VTG +  IG  T  QL   G  V++           +  ++   +  +   F + DI + 
Sbjct: 5   VTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIER--LGGKHPTFVEGDIRNE 62

Query: 71  ASVSSLADFIKTQFGKLDILANNAGIASVKFDMD 104
           A ++ +          +D + + AG+ +V   + 
Sbjct: 63  ALMTEI-----LHDHAIDTVIHFAGLKAVGESVQ 91

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 37.1 bits (84), Expect = 0.001
 Identities = 7/63 (11%), Positives = 16/63 (25%)

Query: 5  TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ 64
          ++   ++ G+   IG    +     G    L  R+      + +                
Sbjct: 2  SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 61

Query: 65 LDI 67
            I
Sbjct: 62 GSI 64

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 0.002
 Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 7/113 (6%)

Query: 6   KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG----LEAVEKLKASGVDPELLL 61
           +  A++TG     G      L  KG  V    R         +E + K   + ++   + 
Sbjct: 1   RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN-MK 59

Query: 62  FHQLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQIT 114
            H  D++D   +  +    + +  ++  L   + +       +  AD     T
Sbjct: 60  LHYGDLTDSTCLVKI--INEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGT 110

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.6 bits (83), Expect = 0.002
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 3/74 (4%)

Query: 6  KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE---KRGLEAVEKLKASGVDPELLLF 62
          +K A++TG     G      L  KG  V    R              +    V+  L+  
Sbjct: 1  RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKL 60

Query: 63 HQLDISDLASVSSL 76
          H  D++D +S+   
Sbjct: 61 HYADLTDASSLRRW 74

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 36.0 bits (82), Expect = 0.003
 Identities = 16/102 (15%), Positives = 30/102 (29%), Gaps = 11/102 (10%)

Query: 7   KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLD 66
           K AVV      +G  +   LA +G  VVL  R   +   A + +                
Sbjct: 24  KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-----------K 72

Query: 67  ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFAD 108
           ++  A+ ++              +     I        A+ +
Sbjct: 73  VNVTAAETADDASRAEAVKGAHFVFTAGAIGLELLPQAAWQN 114

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	298
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.98
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.98
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.98
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.97
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.97
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.96
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.95
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.81
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.79
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.77
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.75
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.73
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.72
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.71
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.7
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.69
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.68
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.67
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.67
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.66
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.65
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.63
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.63
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.61
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.6
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.6
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.59
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.58
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.56
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.47
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.45
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.32
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.28
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.27
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.22
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.19
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.05
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.99
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.91
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.91
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.86
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.84
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.83
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.78
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.74
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.73
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.67
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.67
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.61
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.59
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.58
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.55
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.52
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.5
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.38
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.31
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.23
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.14
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.09
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.08
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.03
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.0
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.98
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.94
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.89
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.88
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.87
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.86
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.85
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.85
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.81
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.77
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.77
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.76
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.76
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.74
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.65
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.64
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.63
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.59
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.56
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.44
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.44
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.4
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.4
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.39
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.36
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.36
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.29
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.28
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.24
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.19
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.11
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.1
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.1
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.09
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.9
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.86
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.85
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.83
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	95.76
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	95.71
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.65
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.56
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.55
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.51
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.43
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.42
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.37
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.29
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.11
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.1
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.95
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.87
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	94.77
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	94.73
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.5
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	94.45
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.38
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.25
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.2
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.1
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	94.03
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	93.91
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.87
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.58
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.58
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	93.55
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.55
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	93.47
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.35
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.24
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.14
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.06
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	92.74
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	92.66
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.64
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.61
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	92.56
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	92.53
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	92.48
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.44
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.41
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	92.31
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.3
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.28
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	92.23
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.2
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.2
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	92.0
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	91.96
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	91.92
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	91.91
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	91.89
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.81
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	91.78
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.78
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	91.53
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	91.51
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	91.21
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.15
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	90.81
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.78
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	90.74
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	90.68
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.38
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	90.18
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	90.15
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	89.88
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	89.82
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	89.69
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	89.66
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	89.58
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	89.55
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	89.38
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	89.35
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	89.29
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	89.26
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	89.1
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	89.03
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	88.96
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	88.79
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	88.73
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	88.58
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	88.43
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	88.24
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	88.16
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	88.09
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	88.07
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	87.98
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	87.87
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	87.54
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	87.41
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	87.31
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	87.11
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	87.1
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	87.04
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	86.96
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	86.54
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	86.46
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	86.12
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	86.06
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	85.94
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	85.62
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	85.57
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	85.24
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	85.23
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	84.92
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	84.64
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	84.36
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	84.22
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	84.1
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	84.03
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	83.98
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	83.44
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	83.32
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	83.28
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	83.2
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	83.15
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	82.99
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	82.95
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	82.73
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	82.62
d1p3y1_	183	MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}	82.56
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	82.38
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	82.06
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	81.61
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	81.58
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	80.93
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	80.84
d1kl7a_	511	Threonine synthase {Baker's yeast (Saccharomyces c	80.48
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	80.04
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	80.03
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	80.02
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	80.01

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.4e-46  Score=327.58  Aligned_cols=228  Identities=25%  Similarity=0.286  Sum_probs=195.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+.+|++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+   +.++++|++++++++++++++.+
T Consensus         7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~---~~~~~~Dvt~~~~v~~~~~~~~~   83 (251)
T d2c07a1           7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE---SSGYAGDVSKKEEISEVINKILT   83 (251)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999999999876654   89999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||.....+.                       .+.+.++|++.+++|+.++|+++++++|.|++++.|+
T Consensus        84 ~~g~iDilvnnag~~~~~~~-----------------------~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~  140 (251)
T d2c07a1          84 EHKNVDILVNNAGITRDNLF-----------------------LRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGR  140 (251)
T ss_dssp             HCSCCCEEEECCCCCCCCCT-----------------------TTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEE
T ss_pred             hcCCceeeeecccccccccc-----------------------ccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeE
Confidence            99999999999998755422                       2357899999999999999999999999999988899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++..+|++||+|+.+|+|+||.|+ 
T Consensus       141 IVnisS~~~~~~~------------------------------------------~~~~~Y~asKaal~~ltr~lA~el~  178 (251)
T d2c07a1         141 IINISSIVGLTGN------------------------------------------VGQANYSSSKAGVIGFTKSLAKELA  178 (251)
T ss_dssp             EEEECCTHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEECCHHhcCCC------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999998887554                                          678899999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCCCC-ChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAGIL-SVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                       .|||||+|+||+|+|++....... ........|++++.+|++++....||+|+.++|
T Consensus       179 ~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  237 (251)
T d2c07a1         179 SRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGY  237 (251)
T ss_dssp             GGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence             489999999999999987653211 112223567888888888888888888888776

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=8.7e-46  Score=323.96  Aligned_cols=229  Identities=28%  Similarity=0.390  Sum_probs=198.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+.  ++.++++|++++++++++++++.+
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV--ETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCC--cEEEEEccCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999988888654332  288999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|+||+||||||+....                       ++.+.+.++|++.+++|+.++|+++|.++|.|++++.|+
T Consensus        80 ~~g~iDiLVnnAG~~~~~-----------------------~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~  136 (251)
T d1vl8a_          80 KFGKLDTVVNAAGINRRH-----------------------PAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPS  136 (251)
T ss_dssp             HHSCCCEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCE
T ss_pred             HcCCCCEEEECCCCCCCC-----------------------ChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccc
Confidence            999999999999986443                       334579999999999999999999999999999988999


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||+++|..+...                                         +.++..+|++||+|+.+|+|+||.|+ 
T Consensus       137 Ii~i~S~~~~~~-----------------------------------------~~~~~~~Y~asKaal~~lt~~lA~e~~  175 (251)
T d1vl8a_         137 IINIGSLTVEEV-----------------------------------------TMPNISAYAASKGGVASLTKALAKEWG  175 (251)
T ss_dssp             EEEECCGGGTCC-----------------------------------------CSSSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ccccccchhccc-----------------------------------------cCccccchHHHHHhHHHHHHHHHHHhc
Confidence            999999765431                                         22567899999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCCCCCh----hhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAGILSV----EEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~~~~~----~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                       .|||||+|+||+|+|++..... ..+    ....+.|+++..+|++++....||+++.++|
T Consensus       176 ~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~  236 (251)
T d1vl8a_         176 RYGIRVNVIAPGWYRTKMTEAVF-SDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKY  236 (251)
T ss_dssp             GGTCEEEEEEECCBCSTTTHHHH-TCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             ccCeEEEEEeeCcccCHHHHhcc-CCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCC
Confidence             4899999999999999875321 112    2234568999999999999999999998876

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=5.5e-46  Score=326.94  Aligned_cols=229  Identities=25%  Similarity=0.298  Sum_probs=192.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +|+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++....+.  ++.++++|+++.++++++++++.
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~   78 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV--KVLYDGADLSKGEAVRGLVDNAV   78 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTS--CEEEECCCTTSHHHHHHHHHHHH
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCC--cEEEEECCCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999975 4667777777654332  28899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|+||+||||||+....                       ++.+.+.++|++.+++|+.++++++++++|+|++++.|
T Consensus        79 ~~~G~iDiLVnnAG~~~~~-----------------------~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G  135 (260)
T d1x1ta1          79 RQMGRIDILVNNAGIQHTA-----------------------LIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFG  135 (260)
T ss_dssp             HHHSCCSEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred             HHhCCCcEEEeecccccCC-----------------------chhhhhHHhhhhhhhccccccccccchhhhhHhhcCCc
Confidence            9999999999999987543                       23346889999999999999999999999999998889


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          ++..+|++||+|+.+|+|+||.|+
T Consensus       136 ~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~el  173 (260)
T d1x1ta1         136 RIINIASAHGLVAS------------------------------------------ANKSAYVAAKHGVVGFTKVTALET  173 (260)
T ss_dssp             EEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEeecccccceecc------------------------------------------CCcchhhhhhhhHHHhHHHHHHHh
Confidence            99999998887654                                          778999999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCC-------CCh------hhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGI-------LSV------EEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~-------~~~------~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .|||||+|+||+|+|++......       ..+      ......|+++..+|++++....||+|+.++|
T Consensus       174 ~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~  245 (260)
T d1x1ta1         174 AGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQ  245 (260)
T ss_dssp             TTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTT
T ss_pred             chhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCC
Confidence              58999999999999998754210       111      1234568888889999999999999998876

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.2e-46  Score=326.32  Aligned_cols=225  Identities=26%  Similarity=0.326  Sum_probs=194.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++..      +..++++|+++.++++++++++.+
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~   74 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGA------NGKGLMLNVTDPASIESVLEKIRA   74 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG------GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC------CCcEEEEEecCHHHhhhhhhhhhc
Confidence            58899999999999999999999999999999999999998888888753      278899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|+||+||||||.....+                       +.+.+.++|++.+++|+.++|+++|+++|+|++++.|+
T Consensus        75 ~~g~iDilVnnAg~~~~~~-----------------------~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~  131 (243)
T d1q7ba_          75 EFGEVDILVNNAGITRDNL-----------------------LMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGR  131 (243)
T ss_dssp             HTCSCSEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             ccCCcceehhhhhhccccc-----------------------cccccccccccccceeechhhhhHHHHHHHHHHcCCCE
Confidence            9999999999999875542                       33468899999999999999999999999999888899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++.++|++||+|+++|+|++|.|+ 
T Consensus       132 II~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~ela  169 (243)
T d1q7ba_         132 IITIGSVVGTMGN------------------------------------------GGQANYAAAKAGLIGFSKSLAREVA  169 (243)
T ss_dssp             EEEECCHHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             eeeecchhhcCCC------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999998876543                                          778999999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCCCC-ChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAGIL-SVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                       .|||||+|+||+|+|++....... ......+.|+++..+|++++....||+|+.++|
T Consensus       170 ~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  228 (243)
T d1q7ba_         170 SRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAY  228 (243)
T ss_dssp             GGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             ccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence             589999999999999986543211 112223557788888888888888888887765

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.3e-45  Score=324.22  Aligned_cols=228  Identities=25%  Similarity=0.246  Sum_probs=178.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++++++..++++..+.+   +.++.||+++.++++++++++.+
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ---VTGSVCDASLRPEREKLMQTVSS   81 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---eEEEeccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999876654   89999999999999999999999


Q ss_pred             hc-CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           83 QF-GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        83 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ++ |++|+||||||...+.+                       +.+.+.++|++.+++|+.++|+++++++|+|++++.|
T Consensus        82 ~~~g~idilvnnAG~~~~~~-----------------------~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G  138 (259)
T d1xq1a_          82 MFGGKLDILINNLGAIRSKP-----------------------TLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCG  138 (259)
T ss_dssp             HHTTCCSEEEEECCC-----------------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred             HhCCCcccccccccccCCCc-----------------------hhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccc
Confidence            98 68999999999876543                       2346889999999999999999999999999988889


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          ++..+|++||+|+.+|+|+||.|+
T Consensus       139 ~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~  176 (259)
T d1xq1a_         139 NIIFMSSIAGVVSA------------------------------------------SVGSIYSATKGALNQLARNLACEW  176 (259)
T ss_dssp             EEEEEC----------------------------------------------------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccc------------------------------------------cccccccccccchhhhhHHHHHHh
Confidence            99999998887543                                          667899999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCC--CCChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAG--ILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .|||||+|+||+|+|++.....  ........+.|+++..+|++++....||+++.++|
T Consensus       177 ~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  237 (259)
T d1xq1a_         177 ASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASY  237 (259)
T ss_dssp             GGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHHTSGGGTT
T ss_pred             cccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence              5899999999999999875432  12223345679999999999999999999998876

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=7.4e-46  Score=322.94  Aligned_cols=221  Identities=23%  Similarity=0.295  Sum_probs=194.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++..      ...++++|++++++++++++++.+
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~   76 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD------AARYVHLDVTQPAQWKAAVDTAVT   76 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG------GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhC------cceEEEeecCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999988888877643      278899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||.....+                       +.+.+.++|++.+++|+.++|++++.++|.|++++.|+
T Consensus        77 ~~g~idilinnAG~~~~~~-----------------------~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~  133 (244)
T d1nffa_          77 AFGGLHVLVNNAGILNIGT-----------------------IEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGS  133 (244)
T ss_dssp             HHSCCCEEEECCCCCCCBC-----------------------TTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             HhCCCeEEEECCcccCCCc-----------------------hhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcce
Confidence            9999999999999875442                       33468899999999999999999999999999888899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++..+|++||+|+.+|+|++|.|+ 
T Consensus       134 Ii~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~ltk~lA~el~  171 (244)
T d1nffa_         134 IINISSIEGLAGT------------------------------------------VACHGYTATKFAVRGLTKSTALELG  171 (244)
T ss_dssp             EEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEecccccccccc------------------------------------------ccccchhhHHHHHHHHHHHHHHHhc
Confidence            9999998887554                                          778999999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                       .|||||+|+||+|+|++....    +++..+.|+++..+|++++....||+++.++|
T Consensus       172 ~~gIrVN~I~PG~i~T~~~~~~----~~~~~~~pl~R~~~p~diA~~v~fL~s~~s~~  225 (244)
T d1nffa_         172 PSGIRVNSIHPGLVKTPMTDWV----PEDIFQTALGRAAEPVEVSNLVVYLASDESSY  225 (244)
T ss_dssp             GGTEEEEEEEECCBCSGGGTTS----CTTCSCCSSSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             ccCEEEEEEeeCCccChhHhhh----hHHHHhccccCCCCHHHHHHHHHHHhChhhCC
Confidence             489999999999999987543    34455677777777777777777887777765

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=3e-45  Score=319.81  Aligned_cols=226  Identities=24%  Similarity=0.320  Sum_probs=183.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .|+||++|||||++|||+++|++|+++|++|++++|++.+  ...+.++..+.+   +.++++|++++++++++++++.+
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~~---~~~~~~Dvs~~~~v~~~~~~~~~   76 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRR---VLTVKCDVSQPGDVEAFGKQVIS   76 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcCCc---EEEEEeeCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998753  333445555443   88999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|+||+||||||+....                       ++.+.+.++|++.+++|+.++|+++++++|.|++++.|+
T Consensus        77 ~~G~iDilVnnAG~~~~~-----------------------~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~  133 (247)
T d2ew8a1          77 TFGRCDILVNNAGIYPLI-----------------------PFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGR  133 (247)
T ss_dssp             HHSCCCEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             HcCCCCEEEECCCCCCCC-----------------------ChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCC
Confidence            999999999999986543                       334578999999999999999999999999999988899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++..+|++||+|+.+|+|+||.|+ 
T Consensus       134 Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~ltk~lA~ela  171 (247)
T d2ew8a1         134 IINLTSTTYWLKI------------------------------------------EAYTHYISTKAANIGFTRALASDLG  171 (247)
T ss_dssp             EEEECCGGGGSCC------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ccccccchhcccC------------------------------------------cccccchhhhccHHHHHHHHHHHhc
Confidence            9999998887554                                          778999999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCCCCCh-h--hhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAGILSV-E--EGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~~~~~-~--~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                       .|||||+|+||+|+|++......... +  .....|+.+..+|++++....||+|+.++|
T Consensus       172 ~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~  232 (247)
T d2ew8a1         172 KDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASF  232 (247)
T ss_dssp             GGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTT
T ss_pred             ccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcC
Confidence             48999999999999998754321111 1  112246777778888888888888888776

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=5.1e-45  Score=320.71  Aligned_cols=229  Identities=23%  Similarity=0.254  Sum_probs=201.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.++++..+.+   +.+++||+++.++++++++.+.+
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~---~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE---ARSYVCDVTSEEAVIGTVDSVVR   78 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999999999877654   88999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||.....                      .++.+.+.++|++.+++|+.++|+++++++|.|.+++.|+
T Consensus        79 ~~g~iDilVnnaG~~~~~----------------------~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~  136 (260)
T d1zema1          79 DFGKIDFLFNNAGYQGAF----------------------APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGR  136 (260)
T ss_dssp             HHSCCCEEEECCCCCCCC----------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             HhCCCCeehhhhcccccc----------------------CccccccHHHHHhhccccccccccchhhHHhhhhhhcCCC
Confidence            999999999999976432                      1334578999999999999999999999999999888899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++..+|++||+|+.+|+|+||.|+ 
T Consensus       137 II~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~ltk~lA~el~  174 (260)
T d1zema1         137 IVNTASMAGVKGP------------------------------------------PNMAAYGTSKGAIIALTETAALDLA  174 (260)
T ss_dssp             EEEECCHHHHSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCeeechhhccCC------------------------------------------cchHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999998876553                                          778999999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCC------------CCCCChhhh-----hhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFH------------AGILSVEEG-----AESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~------------~~~~~~~~~-----a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                       .|||||+|+||+|+|++...            .....+++.     ...|+++..+|++++....||+|+.++|
T Consensus       175 ~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~s~~  249 (260)
T d1zema1         175 PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSF  249 (260)
T ss_dssp             GGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTT
T ss_pred             hhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence             48999999999999997421            112334333     3568999999999999999999999887

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.2e-45  Score=323.73  Aligned_cols=225  Identities=24%  Similarity=0.310  Sum_probs=198.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+   +.+++||++++++++++++++.+
T Consensus         8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~---~~~~~~Dvs~~~~~~~~~~~~~~   84 (255)
T d1fmca_           8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ---AFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCc---EEEEEccCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999999987654   88999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||.....+.                        +.+.++|++.+++|+.++|++++.++|+|+++++|+
T Consensus        85 ~~g~iDilvnnAG~~~~~~~------------------------e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~  140 (255)
T d1fmca_          85 KLGKVDILVNNAGGGGPKPF------------------------DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGV  140 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCT------------------------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             HcCCCCEeeeCCcCCCCCcc------------------------cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccc
Confidence            99999999999997644311                        257889999999999999999999999999988899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++..+|++||+|+.+|+|+||.|+ 
T Consensus       141 Ii~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~el~  178 (255)
T d1fmca_         141 ILTITSMAAENKN------------------------------------------INMTSYASSKAAASHLVRNMAFDLG  178 (255)
T ss_dssp             EEEECCGGGTCCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccchhccc------------------------------------------cccccchhHHHHHHHHHHHHHHHhC
Confidence            9999998877554                                          778999999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCCCCChh----hhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAGILSVE----EGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~~~~~~----~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                       .|||||+|+||+|+|++....  ..++    ...+.|+++..+|++++....||+|+.++|
T Consensus       179 ~~gIrVN~I~PG~i~T~~~~~~--~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~  238 (255)
T d1fmca_         179 EKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASW  238 (255)
T ss_dssp             TTTEEEEEEEECSBCSHHHHTT--CCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             ccCeEEEEeeeCcCcChHhhcc--CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence             589999999999999986432  2222    224568888888888888888998888776

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.3e-45  Score=322.51  Aligned_cols=231  Identities=21%  Similarity=0.202  Sum_probs=198.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...... .++.+++||++++++++++++++.+
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~-~~~~~~~~Dvt~~~~v~~~~~~~~~   79 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD-AEVLTTVADVSDEAQVEAYVTATTE   79 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTT-CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCC-CeEEEEeccCCCHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999999999988888765432 2388999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|+||+||||||+..+..                      ++.+.+.++|++.+++|+.++|+++|+++|.|++++.|+
T Consensus        80 ~~G~iDiLVnnAG~~~~~~----------------------~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~  137 (258)
T d1iy8a_          80 RFGRIDGFFNNAGIEGKQN----------------------PTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGM  137 (258)
T ss_dssp             HHSCCSEEEECCCCCCCCB----------------------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred             HhCCCCEEEECCcccccCC----------------------chhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCC
Confidence            9999999999999764321                      233468899999999999999999999999999888999


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++..+|++||+|+.+|+|+||.|+ 
T Consensus       138 Ii~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~el~  175 (258)
T d1iy8a_         138 VVNTASVGGIRGI------------------------------------------GNQSGYAAAKHGVVGLTRNSAVEYG  175 (258)
T ss_dssp             EEEECCGGGTSBC------------------------------------------SSBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CcccccHhhccCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhC
Confidence            9999998887554                                          778999999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC----CCCChhhh-----hhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA----GILSVEEG-----AESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~----~~~~~~~~-----a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                       .|||||+|+||+|+|++....    ....+++.     ...|+++..+|++++....||+|+.++|
T Consensus       176 ~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~s~~  242 (258)
T d1iy8a_         176 RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASY  242 (258)
T ss_dssp             GGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             ccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence             489999999999999975321    11222222     3457888888888888889999888876

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=2.2e-45  Score=322.86  Aligned_cols=229  Identities=25%  Similarity=0.275  Sum_probs=199.5

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      -+|+||++|||||++|||+++|++|+++|++|++++|+++++++..++++..+..   ..++++|++++++++++++++.
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~---~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK---VEASVCDLSSRSERQELMNTVA   80 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCE---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC---ceEEEeeCCCHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999999999999886554   8899999999999999999999


Q ss_pred             HhcC-CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           82 TQFG-KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        82 ~~~g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      ++++ ++|+||||||.....                       ++.+.+.++|++.+++|+.++|++++.++|+|++++.
T Consensus        81 ~~~~~~idilvnnAG~~~~~-----------------------~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~  137 (259)
T d2ae2a_          81 NHFHGKLNILVNNAGIVIYK-----------------------EAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASER  137 (259)
T ss_dssp             HHTTTCCCEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSS
T ss_pred             HHhCCCceEEEECCceeccC-----------------------ccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcc
Confidence            9987 899999999987543                       2334688999999999999999999999999999889


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          ++...|++||+|+.+|+|++|.|
T Consensus       138 G~Ii~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~e  175 (259)
T d2ae2a_         138 GNVVFISSVSGALAV------------------------------------------PYEAVYGATKGAMDQLTRCLAFE  175 (259)
T ss_dssp             EEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccc------------------------------------------ccccchHHHHHHHHHHHHHHHHH
Confidence            999999998886544                                          77899999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCCCC-C-----hhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAGIL-S-----VEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~~~-~-----~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +  .+||||+|+||+|+|++....... .     .....+.|++++.+|++++....||+|+.++|
T Consensus       176 l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~  241 (259)
T d2ae2a_         176 WAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASY  241 (259)
T ss_dssp             TGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            9  489999999999999986432111 0     11123568888888999999999999988876

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.6e-45  Score=322.70  Aligned_cols=226  Identities=22%  Similarity=0.312  Sum_probs=190.5

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++..      .+.++++|++++++++++++++.
T Consensus         1 ndL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~   74 (254)
T d1hdca_           1 NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGD------AARYQHLDVTIEEDWQRVVAYAR   74 (254)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGG------GEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC------ceEEEEcccCCHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999999888777666532      38899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|++|+||||||.....                       ++.+.+.++|++.+++|+.++|+++++++|+|++++.|
T Consensus        75 ~~~g~iDilVnnAg~~~~~-----------------------~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G  131 (254)
T d1hdca_          75 EEFGSVDGLVNNAGISTGM-----------------------FLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGG  131 (254)
T ss_dssp             HHHSCCCEEEECCCCCCCS-----------------------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred             HHcCCccEEEecCcccccc-----------------------ccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCC
Confidence            9999999999999987544                       23346889999999999999999999999999988889


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          ++..+|++||+|+.+|+|+||.|+
T Consensus       132 ~II~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~  169 (254)
T d1hdca_         132 SIVNISSAAGLMGL------------------------------------------ALTSSYGASKWGVRGLSKLAAVEL  169 (254)
T ss_dssp             EEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eecccccchhcccc------------------------------------------cchhhHHHHHHHHHHHHHHHHHHh
Confidence            99999998887543                                          778999999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCC-CChhhhhhhhhhhhc-cCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGI-LSVEEGAESPVKLAL-LPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~-~~~~~~a~~~~~~~~-~~~~~~~~~~~l~~~~a~~  298 (298)
                        .|||||+|+||+|+|++...... .......+.|+.+.. .|++++....||+|+.++|
T Consensus       170 a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~  230 (254)
T d1hdca_         170 GTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSY  230 (254)
T ss_dssp             GGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTT
T ss_pred             CCCceEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCC
Confidence              48999999999999997643221 122223445666665 4667777777777776655

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.9e-45  Score=323.02  Aligned_cols=225  Identities=26%  Similarity=0.369  Sum_probs=195.8

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ||++|||||++|||+++|++|+++|++|++++|+++++++..+++++.+.+   +.++++|++++++++++++++.++||
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~---~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE---ADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            799999999999999999999999999999999999999999999887654   89999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhh--ccCCCCcE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL--ELSDSPRL  163 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~--~~~~~g~i  163 (298)
                      +||+||||||.....                       ++.+.+.++|++.+++|+.++++++|+++|+|  .+++.|+|
T Consensus        79 ~iDilVnnAG~~~~~-----------------------~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~I  135 (257)
T d2rhca1          79 PVDVLVNNAGRPGGG-----------------------ATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRI  135 (257)
T ss_dssp             SCSEEEECCCCCCCS-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEE
T ss_pred             CCCEEEecccccCCC-----------------------ChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccc
Confidence            999999999987543                       23346889999999999999999999999974  45566899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |+++|..+..+.                                          ++..+|++||+|+.+|+|+||.|+  
T Consensus       136 i~i~S~~~~~~~------------------------------------------~~~~~Y~asKaal~~ltk~lA~el~~  173 (257)
T d2rhca1         136 VNIASTGGKQGV------------------------------------------VHAAPYSASKHGVVGFTKALGLELAR  173 (257)
T ss_dssp             EEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             cccccccccccc------------------------------------------ccchhHHHHHHHHHHHHHHHHHHhhh
Confidence            999998887654                                          778999999999999999999999  


Q ss_pred             CCcEEEEeeCCeeecCCCCCC-------CCCChhh-----hhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 PKFCVNCVCPGFVKTDINFHA-------GILSVEE-----GAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~-------~~~~~~~-----~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      .|||||+|+||+|+|+|....       ....+++     ..+.|+++..+|++++....||+|+.++|
T Consensus       174 ~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s~~  242 (257)
T d2rhca1         174 TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAA  242 (257)
T ss_dssp             SEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             hCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            479999999999999985321       1122222     24568888888999999999999988876

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=3.9e-45  Score=321.49  Aligned_cols=228  Identities=24%  Similarity=0.273  Sum_probs=194.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+ .++.+.++++..+.+   +.++++|++++++++++++++.
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~---~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE---AIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCE---EEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCc---EEEEEccCCCHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999865 577788888876654   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|+||+||||||...+.+                       +.+.+.++|++.+++|+.++|+++++++|.|.+++.|
T Consensus        81 ~~~G~iDiLVnnAG~~~~~~-----------------------~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g  137 (261)
T d1geea_          81 KEFGKLDVMINNAGLENPVS-----------------------SHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIK  137 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHhCCCCEeeccceecCCcc-----------------------hhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccccc
Confidence            99999999999999875442                       3346899999999999999999999999999877655


Q ss_pred             -cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          162 -RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       162 -~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                       +||++||..+..+.                                          +...+|++||+|+.+|+|+||.|
T Consensus       138 ~~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~e  175 (261)
T d1geea_         138 GTVINMSSVHEKIPW------------------------------------------PLFVHYAASKGGMKLMTETLALE  175 (261)
T ss_dssp             CEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccchhcccC------------------------------------------ccccccccCCccchhhHHHHHHH
Confidence             58999998876543                                          77899999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCC---CCChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAG---ILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~---~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +  .|||||+|+||+|+|++.....   ..........|+++..+|++++....||+|+.++|
T Consensus       176 ~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~  238 (261)
T d1geea_         176 YAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASY  238 (261)
T ss_dssp             HGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence            9  4899999999999999864321   01112233558888888888888888888888776

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.5e-45  Score=316.74  Aligned_cols=223  Identities=25%  Similarity=0.241  Sum_probs=189.9

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      |.|++|++|||||++|||+++|++|+++|++|++++|+++++++..+++.        ..+++||++++++++++++++.
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~--------~~~~~~Dv~~~~~v~~~~~~~~   72 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--------AHPVVMDVADPASVERGFAEAL   72 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT--------CEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--------CeEEEEecCCHHHHHHHHHHHH
Confidence            45899999999999999999999999999999999999888777665542        6788999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|+||+||||||+..+.+                       +.+.+.++|++.+++|+.++|+++|+++|.|++++.+
T Consensus        73 ~~~g~iDilVnnAG~~~~~~-----------------------~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~  129 (242)
T d1ulsa_          73 AHLGRLDGVVHYAGITRDNF-----------------------HWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPG  129 (242)
T ss_dssp             HHHSSCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCE
T ss_pred             HhcCCceEEEECCcccccCc-----------------------hhhCcchhhhccccccchhhhhhhhhccccccccccc
Confidence            99999999999999875542                       3346889999999999999999999999999988878


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +|+++||.. ..+.                                          ++..+|++||+|+.+|+|+||.|+
T Consensus       130 ~i~~~ss~~-~~~~------------------------------------------~~~~~Y~asKaal~~ltk~lA~el  166 (242)
T d1ulsa_         130 SIVLTASRV-YLGN------------------------------------------LGQANYAASMAGVVGLTRTLALEL  166 (242)
T ss_dssp             EEEEECCGG-GGCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeeeecccc-ccCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHH
Confidence            888877743 3222                                          668899999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCCCC-hhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGILS-VEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .|||||+|+||+|+|++....+... .......|+++..+|++++....||+|+.++|
T Consensus       167 a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~  226 (242)
T d1ulsa_         167 GRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSF  226 (242)
T ss_dssp             GGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCC
Confidence              4899999999999999986543221 22234568888888888888888988888776

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=1.2e-44  Score=317.67  Aligned_cols=225  Identities=20%  Similarity=0.230  Sum_probs=193.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.   .   ++.++++|++++++++++++++.+
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~---~---~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG---P---AACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHC---T---TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---C---ceEEEEeeCCCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999988888887763   2   288999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhc-cCCCC
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE-LSDSP  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~g  161 (298)
                      ++|+||+||||||.....                       ++.+.+.++|++.+++|+.|+++++++++|.|. +++.|
T Consensus        76 ~~g~iDilVnnAg~~~~~-----------------------~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g  132 (256)
T d1k2wa_          76 RWGSIDILVNNAALFDLA-----------------------PIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGG  132 (256)
T ss_dssp             HHSCCCEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE
T ss_pred             HhCCccEEEeeccccccc-----------------------ccccCCHHHHHhhhceeeeccccchhhccchhHHhccCC
Confidence            999999999999987543                       233468899999999999999999999998754 44579


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          ++..+|++||+|+++|+|++|.|+
T Consensus       133 ~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~el  170 (256)
T d1k2wa_         133 KIINMASQAGRRGE------------------------------------------ALVGVYCATKAAVISLTQSAGLNL  170 (256)
T ss_dssp             EEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhhcccc------------------------------------------ccccchhhhhhHHHHHHHHHHHHh
Confidence            99999998877554                                          778999999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC--------CC----CChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA--------GI----LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~--------~~----~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .|||||+|+||+|+|++....        ..    .........|+++..+|++++....||+|+.++|
T Consensus       171 ~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~~  241 (256)
T d1k2wa_         171 IRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADY  241 (256)
T ss_dssp             GGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGGTT
T ss_pred             cccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence              489999999999999985321        01    1112234568899999999999999999998876

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=9e-45  Score=316.90  Aligned_cols=222  Identities=23%  Similarity=0.252  Sum_probs=188.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.. +..+++.        ..+++||+++.++++++++++.+
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~~--------~~~~~~Dv~~~~~v~~~~~~~~~   72 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAIG--------GAFFQVDLEDERERVRFVEEAAY   72 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHHT--------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHcC--------CeEEEEeCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999997643 3333332        46789999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|+||+||||||...+.+                       +.+.+.++|++.+++|+.|+|+++++++|+|++++.|+
T Consensus        73 ~~G~iDiLVnnAG~~~~~~-----------------------~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~  129 (248)
T d2d1ya1          73 ALGRVDVLVNNAAIAAPGS-----------------------ALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGA  129 (248)
T ss_dssp             HHSCCCEEEECCCCCCCBC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEE
T ss_pred             hcCCCCeEEEeCcCCCCCC-----------------------hhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccc
Confidence            9999999999999875542                       33468899999999999999999999999999988899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++..+|++||+|+.+|+|++|.|+ 
T Consensus       130 Ii~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~ltk~lA~el~  167 (248)
T d2d1ya1         130 IVNVASVQGLFAE------------------------------------------QENAAYNASKGGLVNLTRSLALDLA  167 (248)
T ss_dssp             EEEECCGGGTSBC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ccccccccccccc------------------------------------------cccchhHHHHHHHHHHHHHHHHHhh
Confidence            9999998887654                                          778999999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCC-------CCCChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHA-------GILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~-------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                       .|||||+|+||+|+|++....       ...........|+++..+|++++....||+++.++|
T Consensus       168 ~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~  232 (248)
T d2d1ya1         168 PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASF  232 (248)
T ss_dssp             GGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence             489999999999999875321       112223334568888888888888888888888776

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=9.2e-45  Score=317.46  Aligned_cols=225  Identities=27%  Similarity=0.308  Sum_probs=194.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++... .   .+.++++|++++++++++++++.+
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~-~---~~~~~~~Dv~~~~~v~~~~~~~~~   78 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-D---QIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-T---TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCC-C---cEEEEEccCCCHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999998888888877532 2   388999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC-
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP-  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-  161 (298)
                      ++|+||+||||||.....+                       +.+.+.++|++.+++|+.++|+++++++|.|++++.| 
T Consensus        79 ~~G~iDiLVnnAg~~~~~~-----------------------~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg  135 (251)
T d1zk4a1          79 AFGPVSTLVNNAGIAVNKS-----------------------VEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGA  135 (251)
T ss_dssp             HHSSCCEEEECCCCCCCCC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCE
T ss_pred             HhCCceEEEeccccccccc-----------------------hhcccccchhhhccccccccchhHHHHHHHHHhcCCCC
Confidence            9999999999999875542                       3346899999999999999999999999999987754 


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          ++..+|++||+|+.+|+|++|.|+
T Consensus       136 ~Ii~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~  173 (251)
T d1zk4a1         136 SIINMSSIEGFVGD------------------------------------------PSLGAYNASKGAVRIMSKSAALDC  173 (251)
T ss_dssp             EEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEeeeccceeccC------------------------------------------CCchhHHHHHHHHhcchHHHHHHH
Confidence            89999998876543                                          778999999999999999999984


Q ss_pred             ----CCcEEEEeeCCeeecCCCCCCCCCChhh----hhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 ----PKFCVNCVCPGFVKTDINFHAGILSVEE----GAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 ----~~i~vn~v~PG~v~t~~~~~~~~~~~~~----~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                          .|||||+|+||+|+|++.....  .+++    ..+.|++++.+|++++....||+++.++|
T Consensus       174 ~l~~~gIrVN~I~PG~i~T~~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  236 (251)
T d1zk4a1         174 ALKDYDVRVNTVHPGYIKTPLVDDLP--GAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKF  236 (251)
T ss_dssp             HHTTCSEEEEEEEECCBCCHHHHTST--THHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hcCCCcEEEEEEeCCCCCChhHHhcC--CHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence                4899999999999999865432  2222    23568888888888888888888888776

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=9.3e-45  Score=318.21  Aligned_cols=225  Identities=21%  Similarity=0.312  Sum_probs=194.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +|++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+   +.+++||++++++++++++.+.++||
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~---~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH---AVAVKVDVSDRDQVFAAVEQARKTLG   77 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999999999999999887654   88999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC-CCCcEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSPRLV  164 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv  164 (298)
                      +||+||||||+....                       ++.+.+.++|++.+++|+.|+|+++++++|.|.++ +.++|+
T Consensus        78 ~iDilVnnAG~~~~~-----------------------~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv  134 (255)
T d1gega_          78 GFDVIVNNAGVAPST-----------------------PIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKII  134 (255)
T ss_dssp             CCCEEEECCCCCCCB-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred             CccEEEecccccccC-----------------------cHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccc
Confidence            999999999986543                       33457899999999999999999999999987655 457899


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      ++||..+..+.                                          ++...|++||+|+.+|+|+||.|+  .
T Consensus       135 ~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~  172 (255)
T d1gega_         135 NACSQAGHVGN------------------------------------------PELAVYSSSKFAVRGLTQTAARDLAPL  172 (255)
T ss_dssp             EECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             cccchhhcccC------------------------------------------cccccchhCHHHHHhhHHHHHHHhhhh
Confidence            99998876554                                          778999999999999999999999  4


Q ss_pred             CcEEEEeeCCeeecCCCCCCC------------CCChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          243 KFCVNCVCPGFVKTDINFHAG------------ILSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~~~------------~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      |||||+|+||+|+|++.....            ....+...+.|+++..+|++++....||+|+.++|
T Consensus       173 gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~  240 (255)
T d1gega_         173 GITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY  240 (255)
T ss_dssp             TEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             CcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            899999999999998753210            11122344668888888999999999999988876

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=4.1e-45  Score=318.42  Aligned_cols=224  Identities=23%  Similarity=0.310  Sum_probs=191.2

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-cCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTA-RDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++||||||++|||+++|++|+++|++|++++ |+++.++++.++++..+.+   +.++++|+++.++++++++++.+++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~---~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQ---AITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCE---EEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCc---EEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999976 5666788888888876654   88999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|+||||||.....                       ++.+.+.++|++.+++|+.++|+++++++|+|++++.|+||+
T Consensus        79 ~iDiLVnnAg~~~~~-----------------------~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVn  135 (244)
T d1edoa_          79 TIDVVVNNAGITRDT-----------------------LLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIIN  135 (244)
T ss_dssp             CCSEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCcccccccccccc-----------------------chhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEE
Confidence            999999999987554                       233468999999999999999999999999999888899999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CC
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PK  243 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~  243 (298)
                      +||..+..+.                                          ++..+|++||+|+.+|+|+||.|+  .|
T Consensus       136 isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~g  173 (244)
T d1edoa_         136 IASVVGLIGN------------------------------------------IGQANYAAAKAGVIGFSKTAAREGASRN  173 (244)
T ss_dssp             ECCTHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EcChhhcCCC------------------------------------------CCCHHHHHHHHHHHHChHHHHHHHhhhC
Confidence            9998887554                                          678999999999999999999999  58


Q ss_pred             cEEEEeeCCeeecCCCCCCCCCC-hhhhhhhhhhhhccCCCCCcceEecc-CccCCC
Q 022357          244 FCVNCVCPGFVKTDINFHAGILS-VEEGAESPVKLALLPDGGPTGRFFLR-KEEAPF  298 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~l~-~~~a~~  298 (298)
                      ||||+|+||+|+|++........ .....+.|++++.+|++++....||+ ++.++|
T Consensus       174 IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~  230 (244)
T d1edoa_         174 INVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASY  230 (244)
T ss_dssp             EEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGG
T ss_pred             cEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcC
Confidence            99999999999999875432111 11224567788888888888888875 777654

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=9.1e-44  Score=314.05  Aligned_cols=230  Identities=20%  Similarity=0.240  Sum_probs=193.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++...+    .+.+++||++++++++++++++.+
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~   78 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD----VISFVHCDVTKDEDVRNLVDTTIA   78 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT----TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC----ceEEEEccCCCHHHHHHHHHHHHH
Confidence            5889999999999999999999999999999999999999998888886432    277899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||.....+.                     .+.+.+.++|++.+++|+.|+|+++|+++|+|.+++.|+
T Consensus        79 ~~g~iD~lVnnAG~~~~~~~---------------------~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~  137 (268)
T d2bgka1          79 KHGKLDIMFGNVGVLSTTPY---------------------SILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGS  137 (268)
T ss_dssp             HHSCCCEEEECCCCCCSSCS---------------------STTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEE
T ss_pred             HcCCcceeccccccccCCCc---------------------ccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCC
Confidence            99999999999998654321                     122368899999999999999999999999999888899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||+.+..+.                                         ++....|++||+|+.+|+|++|.|+ 
T Consensus       138 ii~iss~~~~~~~-----------------------------------------~~~~~~Y~asKaal~~lt~~lA~el~  176 (268)
T d2bgka1         138 IVFTASISSFTAG-----------------------------------------EGVSHVYTATKHAVLGLTTSLCTELG  176 (268)
T ss_dssp             EEEECCGGGTCCC-----------------------------------------TTSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ccccccccccccc-----------------------------------------cccccccchhHHHHHhCHHHHHHHhC
Confidence            9999998876542                                         1334589999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCCCCChhhh------hhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAGILSVEEG------AESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~~~~~~~~------a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                       .|||||+|+||+|+|++........++..      ...|+++..+|++++....||+|++++|
T Consensus       177 ~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~  240 (268)
T d2bgka1         177 EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKY  240 (268)
T ss_dssp             GGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTT
T ss_pred             hhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCC
Confidence             48999999999999998765432323221      1235667777888888888888887766

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-45  Score=318.22  Aligned_cols=224  Identities=28%  Similarity=0.352  Sum_probs=185.6

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.    .   ..+++||+++.++++++++++.
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~----~---~~~~~~Dvs~~~~v~~~~~~~~   74 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----G---AVFILCDVTQEDDVKTLVSETI   74 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----T---EEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----C---CeEEEccCCCHHHHHHHHHHHH
Confidence            35899999999999999999999999999999999999888777666543    2   7889999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|+||+||||||......                      ++++.+.++|++.+++|+.++|+++++++|+|+++ +|
T Consensus        75 ~~~g~iDilVnnAG~~~~~~----------------------~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G  131 (250)
T d1ydea1          75 RRFGRLDCVVNNAGHHPPPQ----------------------RPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QG  131 (250)
T ss_dssp             HHHSCCCEEEECCCCCCCCC----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TC
T ss_pred             HhcCCCCEEEeccccccccc----------------------ccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CC
Confidence            99999999999999764332                      12346889999999999999999999999999865 48


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +...+|++||+|+.+|+|+||.|+
T Consensus       132 ~Ii~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~  169 (250)
T d1ydea1         132 NVINISSLVGAIGQ------------------------------------------AQAVPYVATKGAVTAMTKALALDE  169 (250)
T ss_dssp             EEEEECCHHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccccccccccc------------------------------------------cCcchhHHHHhhHHHHHHHHHHHh
Confidence            99999998876543                                          778999999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCCC--Ch-----hhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGIL--SV-----EEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~~--~~-----~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .|||||+|+||+|+|++.......  .+     +.....|+++..+|++++....||+|| ++|
T Consensus       170 a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~~  234 (250)
T d1ydea1         170 SPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANF  234 (250)
T ss_dssp             GGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTT
T ss_pred             cccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cCC
Confidence              489999999999999875432111  11     112344777777777777777777765 554

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.4e-45  Score=315.78  Aligned_cols=218  Identities=22%  Similarity=0.269  Sum_probs=183.3

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +.|+||++|||||++|||+++|++|+++|++|++++|+.+..+              .+..+++|++++++++++++++.
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~--------------~~~~~~~Dv~~~~~v~~~~~~~~   68 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK--------------GLFGVEVDVTDSDAVDRAFTAVE   68 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------------TSEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc--------------CceEEEEecCCHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999976432              27889999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|+||+||||||...+.                       ++.+.+.++|++.+++|+.+++++++.++|.|++++.|
T Consensus        69 ~~~g~iDiLVnnAG~~~~~-----------------------~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g  125 (237)
T d1uzma1          69 EHQGPVEVLVSNAGLSADA-----------------------FLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFG  125 (237)
T ss_dssp             HHHSSCSEEEEECSCCC----------------------------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE
T ss_pred             HhcCCceEEEeeecccccc-----------------------cHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCC
Confidence            9999999999999986543                       23346889999999999999999999999999999999


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          ++..+|++||+|+++|+|+||.|+
T Consensus       126 ~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~  163 (237)
T d1uzma1         126 RMIFIGSVSGLWGI------------------------------------------GNQANYAASKAGVIGMARSIAREL  163 (237)
T ss_dssp             EEEEECCCCC-----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEcchhhccCC------------------------------------------cccHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999887543                                          678999999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCCC-ChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGIL-SVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .|||||+|+||+|+|++....... ........|+++..+|++++....||++++++|
T Consensus       164 ~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  223 (237)
T d1uzma1         164 SKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASY  223 (237)
T ss_dssp             GGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence              589999999999999987543211 112234567888888888888888888888776

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.4e-44  Score=316.17  Aligned_cols=234  Identities=27%  Similarity=0.319  Sum_probs=186.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++...+....++.++++|+++.++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999999999999999998766655699999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|+||+||||||...+....                   ..+.+.+.++|++.+++|+.++|+++++++|+|++++ |+
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~-------------------~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~  141 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQS-------------------KTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GE  141 (264)
T ss_dssp             HHSCCCEEEECCC--------------------------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CE
T ss_pred             HhCCCCEeecccccccCCccc-------------------cccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Cc
Confidence            999999999999986543211                   1223458899999999999999999999999998664 67


Q ss_pred             EEEEccCcc-cccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          163 LVNLSSYVS-ALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       163 iv~vsS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +|+++|+.+ ..+.                                          +...+|++||+|+.+|+|+||.|+
T Consensus       142 iI~~~S~~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~el  179 (264)
T d1spxa_         142 IVNISSIASGLHAT------------------------------------------PDFPYYSIAKAAIDQYTRNTAIDL  179 (264)
T ss_dssp             EEEECCTTSSSSCC------------------------------------------TTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeeeeeccccccC------------------------------------------CCchhhhhhhhhHHHHHHHHHHHh
Confidence            777777554 3332                                          678899999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCCC-----C-h----hhhhhhhhhhhccCCCCCcceEeccCcc-CCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGIL-----S-V----EEGAESPVKLALLPDGGPTGRFFLRKEE-APF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~~-----~-~----~~~a~~~~~~~~~~~~~~~~~~~l~~~~-a~~  298 (298)
                        .|||||+|+||+|+|++.......     . .    ......|+++..+|++++....||+|++ ++|
T Consensus       180 ~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~  249 (264)
T d1spxa_         180 IQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSY  249 (264)
T ss_dssp             GGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTT
T ss_pred             cccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCC
Confidence              489999999999999987543110     0 0    1123457888888888888888888854 554

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=5.3e-43  Score=304.26  Aligned_cols=214  Identities=26%  Similarity=0.235  Sum_probs=189.6

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCE-------EEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGIT-------VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~-------Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      ++||||||++|||+++|++|+++|++       |++.+|+.++++++.++++..+..   +.+++||+++.+++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~---~~~~~~Dvt~~~~v~~~~~~   78 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL---TDTITADISDMADVRRLTTH   78 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCE---EEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCc---EEEEEecCCCHHHHHHHHHH
Confidence            57899999999999999999999997       899999999999999999876654   88999999999999999999


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD  159 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~  159 (298)
                      +.+++|++|+||||||.....                       ++.+.+.++|++.+++|+.|+|+++++++|+|++++
T Consensus        79 ~~~~~g~iDilvnnAg~~~~~-----------------------~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~  135 (240)
T d2bd0a1          79 IVERYGHIDCLVNNAGVGRFG-----------------------ALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH  135 (240)
T ss_dssp             HHHHTSCCSEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHcCCcceeecccccccCC-----------------------ccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC
Confidence            999999999999999987543                       334578999999999999999999999999999888


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          ++...|++||+|+.+|+|+|+.
T Consensus       136 ~G~Ii~isS~~~~~~~------------------------------------------~~~~~Y~asK~al~~lt~~la~  173 (240)
T d2bd0a1         136 SGHIFFITSVAATKAF------------------------------------------RHSSIYCMSKFGQRGLVETMRL  173 (240)
T ss_dssp             CEEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEechhhcCCC------------------------------------------CCChHHHHHHHHHHHHHHHHHH
Confidence            8999999998887554                                          7789999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCC------CCCChhhhhhhhhhhhccCCCCCcce
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHA------GILSVEEGAESPVKLALLPDGGPTGR  288 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~------~~~~~~~~a~~~~~~~~~~~~~~~~~  288 (298)
                      |+  .|||||+|+||+|+|+|....      ...+|++.++..++++..+.....+.
T Consensus       174 el~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~PedvA~~v~~l~s~~~~~~~~~  230 (240)
T d2bd0a1         174 YARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAYLQPSRTVVEE  230 (240)
T ss_dssp             HHTTTTEEEEEEEECCBCSTTTCCCCSTTGGGSBCHHHHHHHHHHHHTSCTTEEEEE
T ss_pred             HhCcCCeEEEEeeeCcccCchhhhcCHhhHhcCCCHHHHHHHHHHHHcCCccCccCC
Confidence            99  589999999999999987543      24688999999888887766544333

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.5e-44  Score=316.64  Aligned_cols=232  Identities=27%  Similarity=0.308  Sum_probs=191.0

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+....++.+++||++++++++++++++.
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            35899999999999999999999999999999999999999999999998876555569999999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|+||+||||||...+.+...                   ...+.+.+.|++.+++|+.++|+++++++|+|++++ |
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~-------------------~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g  140 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGT-------------------TGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-G  140 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCC-------------------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             HHhCCceEEEeCCcccCcccccc-------------------cchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-C
Confidence            99999999999999876543221                   112357788999999999999999999999998765 5


Q ss_pred             cEEEEccC-cccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          162 RLVNLSSY-VSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       162 ~iv~vsS~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++|+++|+ ++..+.                                          ++..+|++||+|+.+|+|+||.|
T Consensus       141 ~iI~~~Ss~a~~~~~------------------------------------------~~~~~Y~asKaal~~ltk~lA~e  178 (272)
T d1xkqa_         141 EIVNVSSIVAGPQAQ------------------------------------------PDFLYYAIAKAALDQYTRSTAID  178 (272)
T ss_dssp             EEEEECCGGGSSSCC------------------------------------------CSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhccccCC------------------------------------------CCcchhhhHHHHHHHHHHHHHHH
Confidence            66666664 444332                                          77899999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCCCCC----------hhhhhhhhhhhhccCCCCCcceEeccCcc
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAGILS----------VEEGAESPVKLALLPDGGPTGRFFLRKEE  295 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~~~~----------~~~~a~~~~~~~~~~~~~~~~~~~l~~~~  295 (298)
                      +  .|||||+|+||+|+|++........          .......|+++..+|++++....||+|++
T Consensus       179 l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL~S~~  245 (272)
T d1xkqa_         179 LAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRN  245 (272)
T ss_dssp             HHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHH
T ss_pred             hcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9  5899999999999999864332110          01112357777777888887788887765

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=7.2e-44  Score=315.66  Aligned_cols=233  Identities=24%  Similarity=0.267  Sum_probs=195.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+....++.++++|++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999999999999998776655699999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|+||+||||||.....+.                     ...+.+.+.|++.+++|+.++|+++++++|.|+++++|+
T Consensus        81 ~~G~iDilVnnAG~~~~~~~---------------------~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~  139 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGT---------------------ANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEI  139 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSC---------------------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEE
T ss_pred             HcCCceEEEeeccccccccc---------------------ccccCCHHHHHHHHhhccccccccccccccccccccccc
Confidence            99999999999997643321                     112357789999999999999999999999999888889


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      |+++||..+..+.                                          ++..+|++||+|+.+|+|++|.|+ 
T Consensus       140 ii~~ss~~~~~~~------------------------------------------~~~~~Y~asKaal~~ltk~lA~ela  177 (274)
T d1xhla_         140 VNVSSIVAGPQAH------------------------------------------SGYPYYACAKAALDQYTRCTAIDLI  177 (274)
T ss_dssp             EEECCGGGSSSCC------------------------------------------TTSHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ccchhhhhccccC------------------------------------------CCCceehhhhhHHHHHHHHHHHHHh
Confidence            9988887765443                                          678899999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCCCCC--hh--------hhhhhhhhhhccCCCCCcceEeccCc-cCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAGILS--VE--------EGAESPVKLALLPDGGPTGRFFLRKE-EAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~~~~--~~--------~~a~~~~~~~~~~~~~~~~~~~l~~~-~a~~  298 (298)
                       .|||||+|+||+|+|++........  .+        .....|+++..+|++++....||+|+ .++|
T Consensus       178 ~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~d~s~~  246 (274)
T d1xhla_         178 QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSY  246 (274)
T ss_dssp             GGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTT
T ss_pred             HhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCCccccC
Confidence             4899999999999999764332110  00        11235788888888888888888874 4554

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=3.7e-43  Score=311.38  Aligned_cols=230  Identities=20%  Similarity=0.173  Sum_probs=191.3

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      |.|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++..      ++.++++|+++.++++++++++.
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~   74 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGD------NVLGIVGDVRSLEDQKQAASRCV   74 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC------CeeEEecccccHHHHHHHHHHHH
Confidence            358999999999999999999999999999999999999888777666532      28899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|++|++|||||+........                  ....+.+.+.|++.+++|+.|+|+++++++|.|++++ |
T Consensus        75 ~~~g~idilvnnAG~~~~~~~~~------------------~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g  135 (276)
T d1bdba_          75 ARFGKIDTLIPNAGIWDYSTALV------------------DLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-G  135 (276)
T ss_dssp             HHHSCCCEEECCCCCCCTTCCGG------------------GSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             HHhCCcccccccccccCCCCccc------------------cccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-C
Confidence            99999999999999875432211                  1112345567999999999999999999999998764 8


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||+++|..+..+.                                          ++..+|++||+|+.+|+|+||.|+
T Consensus       136 ~iI~i~S~~~~~~~------------------------------------------~~~~~Y~asKaal~~ltr~lA~el  173 (276)
T d1bdba_         136 NVIFTISNAGFYPN------------------------------------------GGGPLYTAAKHAIVGLVRELAFEL  173 (276)
T ss_dssp             EEEEECCGGGTSTT------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceeeeechhccCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHh
Confidence            99999998876543                                          678899999999999999999999


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCCC------C-----ChhhhhhhhhhhhccCCCCCcceEeccCc-cCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAGI------L-----SVEEGAESPVKLALLPDGGPTGRFFLRKE-EAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~~------~-----~~~~~a~~~~~~~~~~~~~~~~~~~l~~~-~a~~  298 (298)
                       ++||||+|+||+|+|++......      .     ........|+++..+|++++....||+|+ .++|
T Consensus       174 a~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~~~a~~  243 (276)
T d1bdba_         174 APYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAP  243 (276)
T ss_dssp             TTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCHHHHTT
T ss_pred             hcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCC
Confidence             67999999999999998643210      0     11123456899999999999999999884 5665

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-42  Score=301.37  Aligned_cols=212  Identities=23%  Similarity=0.276  Sum_probs=188.8

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +++.||++|||||++|||+++|++|+++|++|++++|++++++++.++++..+..   +.++.||+++.++++++++.+.
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~---~~~~~~Dvs~~~~v~~~~~~i~   79 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK---VHTFVVDCSNREDIYSSAKKVK   79 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEeeCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999999887654   8999999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|++|++|||||......                       +.+.+.+.|++++++|+.|+++++++++|.|++++.|
T Consensus        80 ~~~g~idilinnag~~~~~~-----------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G  136 (244)
T d1yb1a_          80 AEIGDVSILVNNAGVVYTSD-----------------------LFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHG  136 (244)
T ss_dssp             HHTCCCSEEEECCCCCCCCC-----------------------CGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE
T ss_pred             HHcCCCceeEeecccccccc-----------------------ccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCc
Confidence            99999999999999875542                       2346889999999999999999999999999999899


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +++++|++||+|+.+|+++|+.|+
T Consensus       137 ~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~~~~~La~El  174 (244)
T d1yb1a_         137 HIVTVASAAGHVSV------------------------------------------PFLLAYCSSKFAAVGFHKTLTDEL  174 (244)
T ss_dssp             EEEEECCCC-CCCH------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEeecchhcCCC------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999987653                                          557889999999999999999986


Q ss_pred             -----CCcEEEEeeCCeeecCCCCCC-----CCCChhhhhhhhhhhhccC
Q 022357          242 -----PKFCVNCVCPGFVKTDINFHA-----GILSVEEGAESPVKLALLP  281 (298)
Q Consensus       242 -----~~i~vn~v~PG~v~t~~~~~~-----~~~~~~~~a~~~~~~~~~~  281 (298)
                           +||+||+|+||+|+|++.+..     ...+|++.++..+......
T Consensus       175 ~~~~~~gI~V~~i~PG~v~T~~~~~~~~~~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         175 AALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             HHTTCTTEEEEEEEETHHHHCSTTCTHHHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             HhhcCCCEEEEEEEcCCCCChhhhCcCccccCCCCHHHHHHHHHHHHhcC
Confidence                 489999999999999987652     3568899998877766543

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=3.4e-43  Score=309.07  Aligned_cols=236  Identities=25%  Similarity=0.284  Sum_probs=195.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++.+..+++.+..+.  ++.+++||++++++++++++++.+
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~   83 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV--KTKAYQCDVSNTDIVTKTIQQIDA   83 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTC--CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCC--ceEEEEccCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999998888887654332  288999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc-CCCC
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL-SDSP  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-~~~g  161 (298)
                      ++|++|+||||||.....                       ++.+.+.++|++.+++|+.|++++++.+.|.|.+ +..|
T Consensus        84 ~~g~iDilVnnAg~~~~~-----------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g  140 (260)
T d1h5qa_          84 DLGPISGLIANAGVSVVK-----------------------PATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKG  140 (260)
T ss_dssp             HSCSEEEEEECCCCCCCS-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred             HhCCCcEecccccccccC-----------------------CHHHhccccccccccccccchhhhhhhhcccccccccce
Confidence            999999999999986543                       2334688999999999999999999999999854 4557


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +|++++|.......                                   .......++..+|++||+|+.+|+|++|.|+
T Consensus       141 ~i~~~~s~~~~~~~-----------------------------------~~~~~~~~~~~~Y~asKaal~~lt~~lA~el  185 (260)
T d1h5qa_         141 SIVVTSSMSSQIIN-----------------------------------QSSLNGSLTQVFYNSSKAACSNLVKGLAAEW  185 (260)
T ss_dssp             EEEEECCGGGTSCC-----------------------------------EEETTEECSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeecccccccc-----------------------------------ccccccCccccchhhhhhhHHHHHHHHHHHh
Confidence            77887776654322                                   0011122567899999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCCC-ChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGIL-SVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .|||||+|+||+|+|++....... ........|+++..+|++++....||+|+.++|
T Consensus       186 ~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~  245 (260)
T d1h5qa_         186 ASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATY  245 (260)
T ss_dssp             GGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             chhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcchhCC
Confidence              589999999999999987654211 112334668999999999999999999998876

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=7.1e-43  Score=306.56  Aligned_cols=228  Identities=29%  Similarity=0.296  Sum_probs=194.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +|+||+||||||++|||+++|++|+++|++|++++|+++++++..++++..+..   +.++.+|+++.++++++++++.+
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~---~~~~~~D~s~~~~~~~~~~~~~~   79 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN---VEGSVCDLLSRTERDKLMQTVAH   79 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC---ceEEEeecCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999999887655   88899999999999999999999


Q ss_pred             hc-CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           83 QF-GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        83 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      ++ +++|+||||||.....                       ++.+.+.++|++.+++|+.++++++++++|.|.+++.|
T Consensus        80 ~~~g~idilinnag~~~~~-----------------------~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g  136 (258)
T d1ae1a_          80 VFDGKLNILVNNAGVVIHK-----------------------EAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNG  136 (258)
T ss_dssp             HTTSCCCEEEECCCCCCCC-----------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSE
T ss_pred             HhCCCcEEEeccccccccC-----------------------ccccCCHHHHhhhhhhcccccccccccccccccccccc
Confidence            98 5899999999987554                       23346889999999999999999999999999999999


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +||++||..+..+.                                          +...+|+++|+|+++|+|.+|+|+
T Consensus       137 ~ii~isS~~~~~~~------------------------------------------~~~~~Y~~sK~al~~lt~~lA~el  174 (258)
T d1ae1a_         137 NVIFLSSIAGFSAL------------------------------------------PSVSLYSASKGAINQMTKSLACEW  174 (258)
T ss_dssp             EEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccc------------------------------------------ccchhHHHHHHHHHHHHHHHHHhc
Confidence            99999998887554                                          778999999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCCC---Ch----hhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGIL---SV----EEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~~---~~----~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .+||||+|+||+|+|++.......   ..    ....+.|++++..|++++....||+|++++|
T Consensus       175 ~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~  240 (258)
T d1ae1a_         175 AKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY  240 (258)
T ss_dssp             GGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             CcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCC
Confidence              489999999999999987543211   11    1223568888888889999999999888876

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.9e-43  Score=309.40  Aligned_cols=224  Identities=25%  Similarity=0.274  Sum_probs=188.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++..      +..++++|+++.++++++++++.+
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~~   76 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGE------RSMFVRHDVSSEADWTLVMAAVQR   76 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCT------TEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC------CeEEEEeecCCHHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999999888888877632      278899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||...+.+                       +.+.+.++|++.+++|+.++|+++++++|.|+++ +|+
T Consensus        77 ~~g~iDilVnnAG~~~~~~-----------------------~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~  132 (253)
T d1hxha_          77 RLGTLNVLVNNAGILLPGD-----------------------METGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGS  132 (253)
T ss_dssp             HHCSCCEEEECCCCCCCBC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEE
T ss_pred             HhCCCCeEEecccccCCCC-----------------------cccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCc
Confidence            9999999999999875542                       2346889999999999999999999999999754 599


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++..+|++||+|+.+|+|++|.|+ 
T Consensus       133 Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~~  170 (253)
T d1hxha_         133 IINMASVSSWLPI------------------------------------------EQYAGYSASKAAVSALTRAAALSCR  170 (253)
T ss_dssp             EEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eecccchhhhcCc------------------------------------------cccccccchhHHHHHHHHHHHHHHh
Confidence            9999998887553                                          778899999999999999999998 


Q ss_pred             ---CCcEEEEeeCCeeecCCCCCC--CCCChhhh----hhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 ---PKFCVNCVCPGFVKTDINFHA--GILSVEEG----AESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 ---~~i~vn~v~PG~v~t~~~~~~--~~~~~~~~----a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                         .+||||+|+||+|+|++....  .....+..    ...|+++...|++++....||+|+.++|
T Consensus       171 ~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~  236 (253)
T d1hxha_         171 KQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSV  236 (253)
T ss_dssp             HHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTT
T ss_pred             hcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCC
Confidence               259999999999999875321  11122222    2335566667777778888888877765

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-43  Score=306.89  Aligned_cols=234  Identities=21%  Similarity=0.244  Sum_probs=192.1

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..+++|++|||||++|||+++|++|+++|++|++++|++++++++++++++.+.. .++.+++||++++++++++++.+
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~-~~~~~~~~Dls~~~~v~~~v~~~   83 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP-GTLIPYRCDLSNEEDILSMFSAI   83 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-ceEEEEEccCCCHHHHHHHHHHH
Confidence            77899999999999999999999999999999999999999999999999986543 24889999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-  159 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-  159 (298)
                      .+++|+||+||||||...+.+                       +.+.+.+.|++.+++|+.++|++++.++|.|++++ 
T Consensus        84 ~~~~g~iD~lVnnAg~~~~~~-----------------------~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~  140 (257)
T d1xg5a_          84 RSQHSGVDICINNAGLARPDT-----------------------LLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV  140 (257)
T ss_dssp             HHHHCCCSEEEECCCCCCCCC-----------------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred             HHhcCCCCEEEecccccCCCc-----------------------cccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhcc
Confidence            999999999999999875542                       23468999999999999999999999999987654 


Q ss_pred             -CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          160 -SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       160 -~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                       .|+||++||..+....                                        +.+....|++||+|+.+|+|+|+
T Consensus       141 ~~g~Ii~isS~~~~~~~----------------------------------------p~~~~~~Y~~sKaal~~ltr~la  180 (257)
T d1xg5a_         141 DDGHIININSMSGHRVL----------------------------------------PLSVTHFYSATKYAVTALTEGLR  180 (257)
T ss_dssp             CSCEEEEECCGGGTSCC----------------------------------------SCGGGHHHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEechHhcCCC----------------------------------------CCcccHHHHHHHHHHHhCHHHHH
Confidence             6899999998875332                                        12446779999999999999999


Q ss_pred             HhC----CCcEEEEeeCCeeecCCCCCCCCCCh-hhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          239 KRY----PKFCVNCVCPGFVKTDINFHAGILSV-EEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       239 ~e~----~~i~vn~v~PG~v~t~~~~~~~~~~~-~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      .|+    .+||||+|+||+++|++........+ ......|+.+..+|++++...+||+++.++|
T Consensus       181 ~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~a~~  245 (257)
T d1xg5a_         181 QELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHI  245 (257)
T ss_dssp             HHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTTE
T ss_pred             HHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHHHHHhCChhcC
Confidence            987    48999999999999997644332222 2234456666666666666666666666554

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-42  Score=310.55  Aligned_cols=230  Identities=23%  Similarity=0.247  Sum_probs=196.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCC--CCcceeEEEeccCcHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGV--DPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.....  ...++.+++||++++++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999886421  2235899999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.+|++|+||||||.....+                       +.+.+.++|++.+++|+.++|+++++++|.|.+++.
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~-----------------------~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~  145 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSP-----------------------AEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHG  145 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHC
T ss_pred             HHHhCCeEEEEeeccccccCc-----------------------hhhhhhhhhhhhhcccccchhhHHHHHHHhhccccc
Confidence            999999999999999865442                       334688999999999999999999999999998888


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||... .                                          ..+....|++||+|+.+|+|++|.|
T Consensus       146 g~Ii~~ss~~~-~------------------------------------------~~~~~~~Y~asKaal~~ltk~lA~e  182 (297)
T d1yxma1         146 GSIVNIIVPTK-A------------------------------------------GFPLAVHSGAARAGVYNLTKSLALE  182 (297)
T ss_dssp             EEEEEECCCCT-T------------------------------------------CCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccc-c------------------------------------------cccccccchhHHHHHHHHHHHHHHH
Confidence            99999876432 1                                          2267899999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCCCC-----ChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAGIL-----SVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~~~-----~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +  .|||||+|+||+|+|++.......     ......+.|+++..+|++++....||+|+.++|
T Consensus       183 l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s~~  247 (297)
T d1yxma1         183 WACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASF  247 (297)
T ss_dssp             TGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTT
T ss_pred             hcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            9  489999999999999986432211     112234568889999999999999999998876

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-41  Score=299.53  Aligned_cols=261  Identities=42%  Similarity=0.610  Sum_probs=204.2

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+++|||||++|||+++|++|+++ |++|++++|+.+++++.+++++..+.+   +.+++||+++.++++++++++.+++
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dvs~~~sv~~~~~~~~~~~   79 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLS---PRFHQLDIDDLQSIRALRDFLRKEY   79 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCC---CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCc---EEEEEEecCCHHHHHHHHHHHHHhc
Confidence            357799999999999999999986 999999999999999999999987655   7899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                      |+||+||||||+.......                       +.+.++|+..+++|++|++++++.++|+|++  .|+||
T Consensus        80 g~iDiLVnNAGi~~~~~~~-----------------------~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~iv  134 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADP-----------------------TPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVV  134 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCC-----------------------SCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEE
T ss_pred             CCcEEEEEcCCcCCCCCcc-----------------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcc
Confidence            9999999999987654322                       2466789999999999999999999999975  48999


Q ss_pred             EEccCcccccCC---chHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          165 NLSSYVSALKDL---PEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       165 ~vsS~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      ++||+.+..+..   ++..  .+........................+......  .....|++||+|+.+|++.+++++
T Consensus       135 nisS~~~~~~~~~~~~y~~--~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~aY~~sK~a~~~~t~~la~~l  210 (275)
T d1wmaa1         135 NVSSIMSVRALKSCSPELQ--QKFRSETITEEELVGLMNKFVEDTKKGVHQKEG--WPSSAYGVTKIGVTVLSRIHARKL  210 (275)
T ss_dssp             EECCHHHHHHHHTSCHHHH--HHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTT--CCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccceeccccccchhhh--hhhcccccchhhhccccccchhcccccccccCC--CchHHHHHHHHHHHHHHHHHHHHH
Confidence            999988764321   1111  111122222222222222222222222211112  335689999999999999999887


Q ss_pred             ------CCcEEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCCC--CCcceEeccCccCCC
Q 022357          242 ------PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDG--GPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 ------~~i~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~l~~~~a~~  298 (298)
                            .+|+||+|+||+|+|+|.......+|++.++.++.++..+++  ..+|+||..++..+|
T Consensus       211 ~~~~~~~~I~vn~v~PG~v~T~m~~~~~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~~~~v~~w  275 (275)
T d1wmaa1         211 SEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQW  275 (275)
T ss_dssp             HHHCTTSCCEEEEEECCSBCSTTTCTTCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEECC
T ss_pred             HHHhCCCCeEEEEEecccccCCcccCcccCCHHHHHHHHHHHHcCChhhcCCCeEEEECCEEecC
Confidence                  389999999999999999888889999999999999876654  458999988877776

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-43  Score=303.52  Aligned_cols=222  Identities=23%  Similarity=0.211  Sum_probs=185.4

Q ss_pred             CC-cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            1 MA-EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         1 m~-~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      |. .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++..       +.++++|+++.+++++++  
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~-------~~~~~~Dv~d~~~v~~~~--   71 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-------IEPVCVDLGDWEATERAL--   71 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTT-------CEEEECCTTCHHHHHHHH--
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCC-------CeEEEEeCCCHHHHHHHH--
Confidence            55 47999999999999999999999999999999999999888777766532       778899999999977665  


Q ss_pred             HHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhh-ccC
Q 022357           80 IKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL-ELS  158 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~-~~~  158 (298)
                        +++|+||+||||||.....                       ++.+.+.++|++.+++|+.+++++++.++|.| +++
T Consensus        72 --~~~g~iDilVnnAg~~~~~-----------------------~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~  126 (244)
T d1pr9a_          72 --GSVGPVDLLVNNAAVALLQ-----------------------PFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARG  126 (244)
T ss_dssp             --TTCCCCCEEEECCCCCCCB-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             --HHhCCceEEEecccccccc-----------------------chhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhC
Confidence              5679999999999987544                       23346889999999999999999999999965 455


Q ss_pred             CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHH
Q 022357          159 DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILA  238 (298)
Q Consensus       159 ~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la  238 (298)
                      +.|+||++||..+..+.                                          +...+|++||+|+.+|+|++|
T Consensus       127 ~~g~Ii~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA  164 (244)
T d1pr9a_         127 VPGAIVNVSSQCSQRAV------------------------------------------TNHSVYCSTKGALDMLTKVMA  164 (244)
T ss_dssp             CCEEEEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHH
T ss_pred             CcceEeecccccccccc------------------------------------------cchhhhhhhHHHHHHHHHHHH
Confidence            67999999998876543                                          778999999999999999999


Q ss_pred             HhC--CCcEEEEeeCCeeecCCCCCCCCC---ChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          239 KRY--PKFCVNCVCPGFVKTDINFHAGIL---SVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       239 ~e~--~~i~vn~v~PG~v~t~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      .|+  .|||||+|+||+|+|++.......   ......+.|+++..+|++++....||+|+.++|
T Consensus       165 ~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~  229 (244)
T d1pr9a_         165 LELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGM  229 (244)
T ss_dssp             HHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            999  489999999999999986433211   111224568888888888888888888888776

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.3e-43  Score=304.12  Aligned_cols=221  Identities=22%  Similarity=0.248  Sum_probs=184.1

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++..       +.++++|+++.+++++++    
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-------~~~~~~Dv~~~~~v~~~~----   69 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG-------IEPVCVDLGDWDATEKAL----   69 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTT-------CEEEECCTTCHHHHHHHH----
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCC-------CeEEEEeCCCHHHHHHHH----
Confidence            458999999999999999999999999999999999998887777665431       778899999999877655    


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhc-cCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLE-LSDS  160 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~-~~~~  160 (298)
                      +++|+||+||||||+....                       ++.+.+.++|++.+++|+.+++++++.+.|.|. ++..
T Consensus        70 ~~~g~iDilVnnAg~~~~~-----------------------~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~  126 (242)
T d1cyda_          70 GGIGPVDLLVNNAALVIMQ-----------------------PFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVP  126 (242)
T ss_dssp             TTCCCCSEEEECCCCCCCB-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHcCCCeEEEECCccccch-----------------------hHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhccc
Confidence            5679999999999986543                       334578999999999999999999999999765 4456


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          ++..+|++||+|+.+|+|+||.|
T Consensus       127 g~ii~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~e  164 (242)
T d1cyda_         127 GSIVNVSSMVAHVTF------------------------------------------PNLITYSSTKGAMTMLTKAMAME  164 (242)
T ss_dssp             EEEEEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccccchhhccccC------------------------------------------CccccccchHHHHHHHHHHHHHH
Confidence            899999998776543                                          77899999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCCC---CChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAGI---LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +  .|||||+|+||+|+|++......   .......+.|+++..+|++++....||+++.++|
T Consensus       165 ~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~  227 (242)
T d1cyda_         165 LGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSAS  227 (242)
T ss_dssp             HGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            9  48999999999999998643211   1112234568888888888888888888888776

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=9.6e-42  Score=298.41  Aligned_cols=218  Identities=15%  Similarity=0.074  Sum_probs=185.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      |+|||||++|||+++|++|+++|++|++++|+.++++++.....         .+.++|+++.++++++++++.++||+|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~---------~~~~~dv~~~~~~~~~~~~~~~~~G~i   72 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE---------TYPQLKPMSEQEPAELIEAVTSAYGQV   72 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH---------HCTTSEECCCCSHHHHHHHHHHHHSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC---------cEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            79999999999999999999999999999999887766544322         234689999999999999999999999


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+||||||.....                      .++.+.+.++|++.+++|+.++|+++++++|+|++++.|+||++|
T Consensus        73 DiLVnNAg~~~~~----------------------~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~is  130 (252)
T d1zmta1          73 DVLVSNDIFAPEF----------------------QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFIT  130 (252)
T ss_dssp             CEEEEECCCCCCC----------------------CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CEEEECCcCCCCC----------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccc
Confidence            9999999976432                      133446889999999999999999999999999988889999999


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--CCcE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--PKFC  245 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~~i~  245 (298)
                      |..+..+.                                          +...+|++||+|+.+|+|+||.|+  .|||
T Consensus       131 S~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~ela~~gIr  168 (252)
T d1zmta1         131 SATPFGPW------------------------------------------KELSTYTSARAGACTLANALSKELGEYNIP  168 (252)
T ss_dssp             CSTTTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCC
T ss_pred             cccccccc------------------------------------------ccccccccccccHHHHHHHHHHHhcccCcE
Confidence            98876543                                          678899999999999999999999  4899


Q ss_pred             EEEeeCCeeecCCCCCCCC-----CChhh----hhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          246 VNCVCPGFVKTDINFHAGI-----LSVEE----GAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       246 vn~v~PG~v~t~~~~~~~~-----~~~~~----~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      ||+|+||+|+|++......     ..++.    ....|+++..+|++++....||+|+.++|
T Consensus       169 VN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~  230 (252)
T d1zmta1         169 VFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDY  230 (252)
T ss_dssp             EEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGG
T ss_pred             EEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            9999999999998754311     12222    23558888889999999999999998876

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-41  Score=297.25  Aligned_cols=216  Identities=26%  Similarity=0.303  Sum_probs=176.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .||++|||||++|||+++|++|+++|++|++++|+.+++++..+++..... ..++.+++||+++.++++++++.+.+++
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE-PQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC-GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC-CCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999999999999999998888876432 2248899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC---CC
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD---SP  161 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~---~g  161 (298)
                      |+||+||||||....                               +.|++.+++|+.+++.+++.++|+|.+++   .|
T Consensus        81 G~iDilVnnAg~~~~-------------------------------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g  129 (254)
T d2gdza1          81 GRLDILVNNAGVNNE-------------------------------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGG  129 (254)
T ss_dssp             SCCCEEEECCCCCCS-------------------------------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCE
T ss_pred             CCcCeeccccccccc-------------------------------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCc
Confidence            999999999998632                               34567899999999999999999998754   47


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHH--HHH
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI--LAK  239 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~--la~  239 (298)
                      +||++||..+..+.                                          +...+|++||+|+.+|+|+  |+.
T Consensus       130 ~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~ltrs~ala~  167 (254)
T d2gdza1         130 IIINMSSLAGLMPV------------------------------------------AQQPVYCASKHGIVGFTRSAALAA  167 (254)
T ss_dssp             EEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeeccHhhccCC------------------------------------------CCccchHHHHHHHHHHHHHHHHHH
Confidence            89999998887554                                          7789999999999999997  688


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCCCC-------CC--hhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHAGI-------LS--VEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~~~-------~~--~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      |+  .|||||+|+||+|+|+|......       ..  .......|+++..+|++++...+||+++
T Consensus       168 e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~  233 (254)
T d2gdza1         168 NLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIED  233 (254)
T ss_dssp             HHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHC
T ss_pred             HhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHcC
Confidence            88  58999999999999997643210       00  0011233555555566666666665554

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.9e-41  Score=293.08  Aligned_cols=229  Identities=22%  Similarity=0.226  Sum_probs=182.9

Q ss_pred             cCCCcEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas~--gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      +|+||++|||||+|  |||+++|++|+++|++|++++|+++..+. .+++....+.   ..++++|+++.++++++++.+
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-~~~~~~~~~~---~~~~~~D~~~~~~v~~~~~~~   80 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE-AEKLAEALGG---ALLFRADVTQDEELDALFAGV   80 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTTC---CEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHhhhccCc---ccccccccCCHHHHHHHHHHH
Confidence            37899999999987  99999999999999999999998654444 4444444433   678999999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+++|+||+||||||.......                   +..+.+.+.++|+..+++|+.+++.+++.++|+|++  .
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~-------------------~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~  139 (256)
T d1ulua_          81 KEAFGGLDYLVHAIAFAPREAM-------------------EGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--G  139 (256)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHH-------------------SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--E
T ss_pred             HHhcCCceEEEecccccccccc-------------------ccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--C
Confidence            9999999999999998653211                   112335678889999999999999999999999974  4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+..+.                                          ++..+|++||+|+++|+|++|.|
T Consensus       140 G~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~ltr~lA~e  177 (256)
T d1ulua_         140 GGIVTLTYYASEKVV------------------------------------------PKYNVMAIAKAALEASVRYLAYE  177 (256)
T ss_dssp             EEEEEEECGGGTSBC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEeehHhcCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHH
Confidence            899999998876543                                          77899999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCCCC---ChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAGIL---SVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +  .|||||+|+||+|+|++.......   ........|+++..+|++++....||+|+.++|
T Consensus       178 la~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  240 (256)
T d1ulua_         178 LGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASG  240 (256)
T ss_dssp             HGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             hcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            9  489999999999999987543221   112234568888888999999999999988876

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.3e-40  Score=298.27  Aligned_cols=207  Identities=17%  Similarity=0.133  Sum_probs=174.4

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc---------hhhHHHHHHHHhcCCCCcceeEEEeccCcHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE---------KRGLEAVEKLKASGVDPELLLFHQLDISDLAS   72 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~   72 (298)
                      +.|+||++|||||++|||+++|++|+++|++|++++|+.         +.+++..+++...      .....+|+++.++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~d~~~~~~   76 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR------GGKAVANYDSVEA   76 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT------TCEEEEECCCGGG
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc------ccccccccchHHH
Confidence            357899999999999999999999999999999997653         3456666677654      3456789999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHh
Q 022357           73 VSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALI  152 (298)
Q Consensus        73 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~  152 (298)
                      ++++++.+.+++|+||+||||||+....                       ++.+.+.++|++.+++|+.|+|+++++++
T Consensus        77 ~~~~v~~~~~~~G~iDiLVnNAGi~~~~-----------------------~~~~~~~e~~~~~~~vNl~g~~~~~~~~~  133 (302)
T d1gz6a_          77 GEKLVKTALDTFGRIDVVVNNAGILRDR-----------------------SFSRISDEDWDIIQRVHLRGSFQVTRAAW  133 (302)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccCCCC-----------------------ChhhCCHHHHhhhhceeehhhHHHHHHhH
Confidence            9999999999999999999999987554                       23457899999999999999999999999


Q ss_pred             hhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHH
Q 022357          153 PLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINA  232 (298)
Q Consensus       153 ~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~  232 (298)
                      |+|++++.|+||++||..+..+.                                          ++...|++||+|+.+
T Consensus       134 p~m~~~~~G~IV~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~  171 (302)
T d1gz6a_         134 DHMKKQNYGRIIMTASASGIYGN------------------------------------------FGQANYSAAKLGLLG  171 (302)
T ss_dssp             HHHHHHTCEEEEEECCHHHHHCC------------------------------------------TTCHHHHHHHHHHHH
T ss_pred             HHHHhCCCcEEEEeCChhhcCCC------------------------------------------CCcHHHHHHHHHHHH
Confidence            99998888999999998876554                                          778999999999999


Q ss_pred             HHHHHHHhC--CCcEEEEeeCCeeecCCCCCCC-----CCChhhhhhhhhhhhc
Q 022357          233 YTRILAKRY--PKFCVNCVCPGFVKTDINFHAG-----ILSVEEGAESPVKLAL  279 (298)
Q Consensus       233 l~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~-----~~~~~~~a~~~~~~~~  279 (298)
                      |+|+|+.|+  .|||||+|+||++.|++....+     ..+|++.+...++++.
T Consensus       172 lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~~~~~~~~PedvA~~v~fL~S  225 (302)
T d1gz6a_         172 LANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPEDLVEALKPEYVAPLVLWLCH  225 (302)
T ss_dssp             HHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCHHHHHHSCGGGTHHHHHHHTS
T ss_pred             HHHHHHHHHhccCCceeeeCCCCCCcchhhcCcHhhHhcCCHHHHHHHHHHHcC
Confidence            999999999  5899999999999887654321     2355555555555543

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=1.6e-41  Score=295.02  Aligned_cols=222  Identities=25%  Similarity=0.252  Sum_probs=181.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.   .+.++++|++++++++++++.+.+
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dls~~~~i~~~~~~i~~   75 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EA---EAIAVVADVSDPKAVEAVFAEALE   75 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CS---SEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CC---ceEEEEecCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988766555543   32   288999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      ++|++|+||||||.....                       ++.+.+.++|++.+++|+.+++.+++.++|+|+++  +.
T Consensus        76 ~~g~iDiLinnAg~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~  130 (241)
T d2a4ka1          76 EFGRLHGVAHFAGVAHSA-----------------------LSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GS  130 (241)
T ss_dssp             HHSCCCEEEEGGGGTTTT-----------------------C----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CE
T ss_pred             HhCCccEecccccccccc-----------------------chhhhhccccccccccccccccccccccccccccc--cc
Confidence            999999999999986543                       23346889999999999999999999999998643  56


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      |+++||.+....                                           ++...|+++|+|+++|+|+||.|+ 
T Consensus       131 i~~~ss~a~~~~-------------------------------------------~~~~~Y~~sK~al~~lt~~lA~el~  167 (241)
T d2a4ka1         131 LVLTGSVAGLGA-------------------------------------------FGLAHYAAGKLGVVGLARTLALELA  167 (241)
T ss_dssp             EEEECCCTTCCH-------------------------------------------HHHHHHHHCSSHHHHHHHHHHHHHT
T ss_pred             eeeccccccccc-------------------------------------------cCccccchhhHHHHHHHHHHHHHHh
Confidence            666666543211                                           446789999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCCCCCh-hhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAGILSV-EEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~~~~~-~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                       .|||||+|+||+|+|++....+.... +...+.|+++...|++++....||+|+.++|
T Consensus       168 ~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~  226 (241)
T d2a4ka1         168 RKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAY  226 (241)
T ss_dssp             TTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCC
Confidence             48999999999999998754321111 2234567888888888888888888888776

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-39  Score=285.91  Aligned_cols=228  Identities=19%  Similarity=0.133  Sum_probs=189.2

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHH---CCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLAS---KGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~---~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      ..|.||++|||||++|||+++|++|++   +|++|++++|++++++++.+++...+.. .++.+++||++++++++++++
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~-~~~~~~~~Dvs~~~~v~~l~~   80 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPD-LKVVLAAADLGTEAGVQRLLS   80 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTT-SEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCC-ceEEEEEccCCCHHHHHHHHH
Confidence            358899999999999999999999996   7999999999999999999999875432 248999999999999999999


Q ss_pred             HHHHh----cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhh
Q 022357           79 FIKTQ----FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL  154 (298)
Q Consensus        79 ~~~~~----~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  154 (298)
                      .+.+.    ++.+|++|||||...+.+                    ...+.+.+.+.|++.+++|+.++++++++++|+
T Consensus        81 ~~~~~~~~~~~~~~~lvnnag~~~~~~--------------------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  140 (259)
T d1oaaa_          81 AVRELPRPEGLQRLLLINNAATLGDVS--------------------KGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNA  140 (259)
T ss_dssp             HHHHSCCCTTCCEEEEEECCCCCCCCS--------------------SCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             HHHHhhhhccCceEEEEecccccccCC--------------------CCccccCCHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence            88763    357899999999864321                    123345688999999999999999999999999


Q ss_pred             hccCC--CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHH
Q 022357          155 LELSD--SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINA  232 (298)
Q Consensus       155 ~~~~~--~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~  232 (298)
                      |++++  .|+||++||..+..+.                                          +++..|++||+|+.+
T Consensus       141 m~~~~~~~g~Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~  178 (259)
T d1oaaa_         141 FQDSPGLSKTVVNISSLCALQPY------------------------------------------KGWGLYCAGKAARDM  178 (259)
T ss_dssp             SCCCTTCEEEEEEECCGGGTSCC------------------------------------------TTCHHHHHHHHHHHH
T ss_pred             HHhcCCCcccccccccccccCCC------------------------------------------ccchHHHHHHHHHHH
Confidence            98765  4799999998887554                                          778999999999999


Q ss_pred             HHHHHHHhCCCcEEEEeeCCeeecCCCCC--------------------CCCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          233 YTRILAKRYPKFCVNCVCPGFVKTDINFH--------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       233 l~~~la~e~~~i~vn~v~PG~v~t~~~~~--------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      |+|+||.|.++||||+|+||+|+|+|...                    ....+|++.++..+.++... ...+|..+..
T Consensus       179 lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i~~ll~~~-s~~TG~~idv  257 (259)
T d1oaaa_         179 LYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKD-TFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHHC-CSCTTEEEET
T ss_pred             HHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhhc-cCCCCCeEEe
Confidence            99999999999999999999999987421                    12357888888777776543 3556666654


Q ss_pred             C
Q 022357          293 K  293 (298)
Q Consensus       293 ~  293 (298)
                      .
T Consensus       258 ~  258 (259)
T d1oaaa_         258 Y  258 (259)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2e-40  Score=291.06  Aligned_cols=227  Identities=27%  Similarity=0.294  Sum_probs=190.8

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC-chhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD-EKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .|.||+||||||++|||+++|++|+++|++|++++++ .+.+++..+++++.+.+   +.+++||+++.++++++++.+.
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~---~~~~~~D~~~~~~v~~~~~~~~   79 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ---GVAIQADISKPSEVVALFDKAV   79 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCC---ceEecCCCCCHHHHHHHHHHHH
Confidence            4889999999999999999999999999999997655 44577788888877665   8899999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|+||+||||||.....+                       +.+.+.+.|++.+++|+.+++++++.++|+|+++  |
T Consensus        80 ~~~g~idilinnag~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g  134 (259)
T d1ja9a_          80 SHFGGLDFVMSNSGMEVWCD-----------------------ELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--G  134 (259)
T ss_dssp             HHHSCEEEEECCCCCCCCCC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--E
T ss_pred             HHcCCCcEEEeccccccccc-----------------------cccchHHHHHHHHhhccceeeeehhhhhhhhhcC--C
Confidence            99999999999999875442                       2346889999999999999999999999999754  6


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      ++++++|..+...                                         +.+.+..|++||+|+++|+|+||.|+
T Consensus       135 ~~iii~s~~~~~~-----------------------------------------~~~~~~~Y~asK~al~~l~r~lA~e~  173 (259)
T d1ja9a_         135 RIILTSSIAAVMT-----------------------------------------GIPNHALYAGSKAAVEGFCRAFAVDC  173 (259)
T ss_dssp             EEEEECCGGGTCC-----------------------------------------SCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccc-----------------------------------------CCCCchhHHHHHHHHHHHHHHHHHHH
Confidence            8888888665432                                         23678999999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC---------CCCChhh-----hhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA---------GILSVEE-----GAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~---------~~~~~~~-----~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .|||||+|+||+|+|++.+..         ....+++     ....|+++..+|++++....||+++.++|
T Consensus       174 ~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~S~~a~~  246 (259)
T d1ja9a_         174 GAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEW  246 (259)
T ss_dssp             GGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence              489999999999999875221         1122222     24568888888999999999999998876

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=3.3e-39  Score=281.46  Aligned_cols=223  Identities=23%  Similarity=0.299  Sum_probs=185.6

Q ss_pred             CcEEEEeCCCCchhHHHHHHHH---HCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLA---SKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La---~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      -|+||||||++|||+++|++|+   ++|++|++++|++++++++.+..+. +.+   +.+++||++++++++++++.+.+
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~-~~~---~~~~~~Dvs~~~~v~~~~~~i~~   77 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN-HSN---IHILEIDLRNFDAYDKLVADIEG   77 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH-CTT---EEEEECCTTCGGGHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhc-CCc---EEEEEEEeccHHHHHHHHhhhHH
Confidence            3799999999999999999996   5799999999999988776544443 333   89999999999999999998854


Q ss_pred             --hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC--
Q 022357           83 --QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS--  158 (298)
Q Consensus        83 --~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--  158 (298)
                        .++++|+||||||+......                      +.+.+.++|++.+++|+.|++.+++.++|+|+++  
T Consensus        78 ~~~~~~iDiLvnNAg~~~~~~~----------------------~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~  135 (248)
T d1snya_          78 VTKDQGLNVLFNNAGIAPKSAR----------------------ITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAK  135 (248)
T ss_dssp             HHGGGCCSEEEECCCCCCCCCC----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhcCCcceEEeeccccccCcc----------------------cccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhh
Confidence              67899999999998654322                      2235788899999999999999999999999753  


Q ss_pred             ---------CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHH
Q 022357          159 ---------DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAV  229 (298)
Q Consensus       159 ---------~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a  229 (298)
                               ..|+||+++|..+....                                       .+.++..+|++||+|
T Consensus       136 ~~~~~~~~~~~g~ii~i~S~~g~~~~---------------------------------------~~~~~~~~Y~aSKaa  176 (248)
T d1snya_         136 ANESQPMGVGRAAIINMSSILGSIQG---------------------------------------NTDGGMYAYRTSKSA  176 (248)
T ss_dssp             HTTTSCSSTTTCEEEEECCGGGCSTT---------------------------------------CCSCCCHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccCC---------------------------------------CCCCChHHHHHHHHH
Confidence                     35899999998876532                                       223567799999999


Q ss_pred             HHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          230 INAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       230 l~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +.+|+++++.++  .||+||+|+||+|+|+|.....++.+++.+..++..+.......+|.||..+
T Consensus       177 l~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~~~~~~~~~~i~~~i~~l~~~~tG~~i~~d  242 (248)
T d1snya_         177 LNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYD  242 (248)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCSBCHHHHHHHHHHHHHHCCGGGTTCEECTT
T ss_pred             HHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCCCCchHHHHHHHHHHHhcCccCCCcEEEEC
Confidence            999999999999  4899999999999999998877788888888877777655555678888653

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.6e-40  Score=291.45  Aligned_cols=227  Identities=27%  Similarity=0.340  Sum_probs=191.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+ .++++.+++++.+.+   +.++++|++++++++++++++.
T Consensus        15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~---~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD---AACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCC---EEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCc---eeeEeCCCCCHHHHHHHHHHHH
Confidence            488999999999999999999999999999999998754 567778888877665   8999999999999999999999


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                      +++|++|++|||+|.....                       ++.+.+.+.|++.+++|+.+++.++++++|+|++  .|
T Consensus        92 ~~~g~idilV~nag~~~~~-----------------------~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g  146 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVSFG-----------------------HVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GG  146 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCC-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TC
T ss_pred             HHhCCCCccccccccchhh-----------------------hhhhhhhhHHHHHhhhccceeeeecccccccccc--cc
Confidence            9999999999999976543                       2334688999999999999999999999999974  47


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      ++++++|+.+...                                         ..+....|++||+|+++|+|++|.|+
T Consensus       147 ~~i~i~s~~~~~~-----------------------------------------~~~~~~~Y~asKaal~~ltk~lA~e~  185 (272)
T d1g0oa_         147 RLILMGSITGQAK-----------------------------------------AVPKHAVYSGSKGAIETFARCMAIDM  185 (272)
T ss_dssp             EEEEECCGGGTCS-----------------------------------------SCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccc-----------------------------------------cccchhhHHHHHHHHHHHHHHHHHHh
Confidence            9999988765432                                         23667889999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCC--------CCCChh------hhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHA--------GILSVE------EGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~--------~~~~~~------~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .|||||+|+||+|+|++....        .....+      .....|+++...|++++....||+++.++|
T Consensus       186 ~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~s~~s~~  258 (272)
T d1g0oa_         186 ADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGW  258 (272)
T ss_dssp             GGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             chhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence              589999999999999874221        112222      223568888888889999999999888876

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.2e-39  Score=284.67  Aligned_cols=226  Identities=27%  Similarity=0.342  Sum_probs=174.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.    +....  ++.+++||+++.++++++++.+.+
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~----~~~~~--~~~~~~~Dvs~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SIKDS--RVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TCCCT--TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH----HhhCC--ceEEEEEecCCHHHHHHHHHHHHH
Confidence            459999999999999999999999996  6888999998876543    22222  389999999999999999999998


Q ss_pred             hcC--CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-
Q 022357           83 QFG--KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-  159 (298)
Q Consensus        83 ~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-  159 (298)
                      .++  +||+||||||+.....                      .+.+.+.+.|++.+++|+.|++++++.++|+|++++ 
T Consensus        76 ~~~~~~idilinnAG~~~~~~----------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~  133 (250)
T d1yo6a1          76 IVGSDGLSLLINNAGVLLSYG----------------------TNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAAS  133 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBC----------------------TTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHH
T ss_pred             HhCCCCeEEEEEcCcccCCCC----------------------ccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcc
Confidence            876  4999999999865421                      122357889999999999999999999999997542 


Q ss_pred             ----------CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHH
Q 022357          160 ----------SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAV  229 (298)
Q Consensus       160 ----------~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a  229 (298)
                                .+++++++|..+.....                                   ..........+|++||+|
T Consensus       134 ~~~~~~~~~~~~~~i~~s~~~~~~~~~-----------------------------------~~~~~~~~~~aY~aSKaa  178 (250)
T d1yo6a1         134 KESGDQLSVSRAAVITISSGLGSITDN-----------------------------------TSGSAQFPVLAYRMSKAA  178 (250)
T ss_dssp             SSCSSCCCTTTCEEEEECCGGGCSTTC-----------------------------------CSTTSSSCBHHHHHHHHH
T ss_pred             CCCCccccceeccccccccccccccCC-----------------------------------cccccchhHHHHHHHHHH
Confidence                      37889988876654321                                   111222345679999999


Q ss_pred             HHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhhccCCCCCcceEeccC
Q 022357          230 INAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLALLPDGGPTGRFFLRK  293 (298)
Q Consensus       230 l~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  293 (298)
                      +.+|+++|+.|+  .||+||+|+||+|+|+|......+++++.++.++..+..+....+|+||..+
T Consensus       179 l~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~  244 (250)
T d1yo6a1         179 INMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNGRFFMRN  244 (250)
T ss_dssp             HHHHHHHHHHHTGGGTCEEEEEECCCC-------------HHHHHHHHHHHTTCCGGGTTCEEETT
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCeEEECCC
Confidence            999999999999  5899999999999999988878899999999999999888888899998653

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=9.2e-41  Score=289.03  Aligned_cols=212  Identities=20%  Similarity=0.242  Sum_probs=175.0

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      |++|++|||||++|||+++|++|+++|++|++++|+++.+++       .+     ..++.||+++.      ++.+.++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~~-----~~~~~~Dv~~~------~~~~~~~   63 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------SG-----HRYVVCDLRKD------LDLLFEK   63 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------TC-----SEEEECCTTTC------HHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------cC-----CcEEEcchHHH------HHHHHHH
Confidence            689999999999999999999999999999999999754332       22     45678999864      4556678


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      ++++|+||||||.....                       ++.+.+.++|++.+++|+.++++++++++|.|++++.|+|
T Consensus        64 ~g~iD~lVnnAG~~~~~-----------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~i  120 (234)
T d1o5ia_          64 VKEVDILVLNAGGPKAG-----------------------FFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRI  120 (234)
T ss_dssp             SCCCSEEEECCCCCCCB-----------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             hCCCcEEEecccccCCc-----------------------chhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccc
Confidence            89999999999976443                       2334688999999999999999999999999998888999


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |+++|..+..+.                                          +....|++||+|+.+|+|++|.|+  
T Consensus       121 i~i~S~~~~~~~------------------------------------------~~~~~Y~asKaal~~ltk~lA~ela~  158 (234)
T d1o5ia_         121 VAITSFSVISPI------------------------------------------ENLYTSNSARMALTGFLKTLSFEVAP  158 (234)
T ss_dssp             EEECCGGGTSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             cccccccccccc------------------------------------------cccccchhHHHHHHHHHHHHHHHhcc
Confidence            999998766443                                          778899999999999999999999  


Q ss_pred             CCcEEEEeeCCeeecCCCCCCCC--CChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 PKFCVNCVCPGFVKTDINFHAGI--LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      .|||||+|+||+++|++......  .......+.|+++..+|++++....||+|+.++|
T Consensus       159 ~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~  217 (234)
T d1o5ia_         159 YGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASY  217 (234)
T ss_dssp             GTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             cCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcC
Confidence            48999999999999998643211  1112234568888888888888888888888776

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=3.2e-39  Score=282.51  Aligned_cols=203  Identities=21%  Similarity=0.252  Sum_probs=169.4

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccC-cHHHHHHHHHHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDIS-DLASVSSLADFI   80 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls-~~~~v~~~~~~~   80 (298)
                      ++|+||+||||||++|||+++|++|+++|++|++++|+.++.+...+........  .+.++.+|++ +.++++++++++
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~   78 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKV--NITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTS--EEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCC--CEEEEEeecCCCHHHHHHHHHHH
Confidence            4589999999999999999999999999999999999887755544333333322  3889999998 667899999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCC-
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSD-  159 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-  159 (298)
                      .+++|+||+||||||..                               +.+.|++++++|+.|+++++++++|.|.+++ 
T Consensus        79 ~~~~g~iDilvnnAG~~-------------------------------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~  127 (254)
T d1sbya1          79 FDQLKTVDILINGAGIL-------------------------------DDHQIERTIAINFTGLVNTTTAILDFWDKRKG  127 (254)
T ss_dssp             HHHHSCCCEEEECCCCC-------------------------------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT
T ss_pred             HHHcCCCCEEEeCCCCC-------------------------------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhccc
Confidence            99999999999999964                               3456778999999999999999999997653 


Q ss_pred             --CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH
Q 022357          160 --SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       160 --~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l  237 (298)
                        .|+||++||..+..+.                                          ++...|++||+|+.+|+|+|
T Consensus       128 ~~~g~Ii~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~~t~~l  165 (254)
T d1sbya1         128 GPGGIIANICSVTGFNAI------------------------------------------HQVPVYSASKAAVVSFTNSL  165 (254)
T ss_dssp             CCCEEEEEECCGGGTSCC------------------------------------------TTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEechhhccCC------------------------------------------CCCHHHHHHHHHHHHHHHHH
Confidence              4899999998887554                                          77899999999999999999


Q ss_pred             HHhC--CCcEEEEeeCCeeecCCCCCC-----------------CCCChhhhhhhhhhhhc
Q 022357          238 AKRY--PKFCVNCVCPGFVKTDINFHA-----------------GILSVEEGAESPVKLAL  279 (298)
Q Consensus       238 a~e~--~~i~vn~v~PG~v~t~~~~~~-----------------~~~~~~~~a~~~~~~~~  279 (298)
                      +.|+  .|||||+|+||+|+|++.+..                 +..++++.++..+....
T Consensus       166 a~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~  226 (254)
T d1sbya1         166 AKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIE  226 (254)
T ss_dssp             HHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHH
T ss_pred             HhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhh
Confidence            9999  589999999999999864321                 13367777776665554

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1e-38  Score=284.91  Aligned_cols=229  Identities=17%  Similarity=0.114  Sum_probs=188.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++++.++++....+..  +.++++|+++.++++++++.+.+
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~--~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNK--VHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSC--EEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCc--eEEEEecccChHHHHHHhhhhhh
Confidence            6899999999999999999999999999999999999999999998887654332  88999999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC-CCC
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-DSP  161 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g  161 (298)
                      +++++|+||||||......                       +...+.+++.+.+.+|+.+.+.+.+...+.+... ..+
T Consensus       100 ~~g~iDilvnnAg~~~~~~-----------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~  156 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNFISP-----------------------TERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGA  156 (294)
T ss_dssp             HTCSCSEEEECCCCCCCSC-----------------------GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred             hccccchhhhhhhhccccc-----------------------cccchhhhhhhheeeecccchhhhhhhhcccccccccc
Confidence            9999999999999875432                       2235778888999999999999998887766544 456


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      .+++++|..+..+.                                          +...+|++||+|+++|+|.+|.|+
T Consensus       157 ~i~~~ss~~~~~~~------------------------------------------~~~~~YsasKaal~~ltk~lA~el  194 (294)
T d1w6ua_         157 AFLSITTIYAETGS------------------------------------------GFVVPSASAKAGVEAMSKSLAAEW  194 (294)
T ss_dssp             EEEEECCTHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccchhhhcc------------------------------------------cccchHHHHHHHHHHHHHHHHHHH
Confidence            77888886655433                                          667899999999999999999999


Q ss_pred             --CCcEEEEeeCCeeecCCCCCCCC----CChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          242 --PKFCVNCVCPGFVKTDINFHAGI----LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                        .|||||+|+||+|+|++......    ...+.....|+++..+|++++....||+++.++|
T Consensus       195 a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~~  257 (294)
T d1w6ua_         195 GKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASW  257 (294)
T ss_dssp             GGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             hHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence              58999999999999998644321    1222335668888989999999999999988876

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-40  Score=284.53  Aligned_cols=222  Identities=20%  Similarity=0.212  Sum_probs=179.8

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |..|+||++|||||++|||+++|++|+++|++|++++|++++++++.+    ..+    +....+|+.+.+.++    ..
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~----~~~----~~~~~~d~~~~~~~~----~~   68 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----YPG----IQTRVLDVTKKKQID----QF   68 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----STT----EEEEECCTTCHHHHH----HH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----ccC----Cceeeeecccccccc----cc
Confidence            888999999999999999999999999999999999999876554322    211    678888988766544    44


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|+||||||.....+                       +.+.+.+.|+..+++|+.+++.+++.++|+|.+++.
T Consensus        69 ~~~~~~id~lVn~ag~~~~~~-----------------------~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~  125 (245)
T d2ag5a1          69 ANEVERLDVLFNVAGFVHHGT-----------------------VLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKS  125 (245)
T ss_dssp             HHHCSCCSEEEECCCCCCCBC-----------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred             ccccccceeEEecccccCCCC-----------------------hhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCC
Confidence            556789999999999876542                       234688999999999999999999999999998888


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      |+||++||..+...                                         +.+.+.+|+++|+|+++|+|+||.|
T Consensus       126 g~Ii~isS~~~~~~-----------------------------------------~~~~~~~Y~~sKaal~~l~r~lA~e  164 (245)
T d2ag5a1         126 GNIINMSSVASSVK-----------------------------------------GVVNRCVYSTTKAAVIGLTKSVAAD  164 (245)
T ss_dssp             EEEEEECCSBTTTB-----------------------------------------CCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeeeeechhhccC-----------------------------------------CccchhHHHHHHHHHHHHHHHHHHH
Confidence            99999999876432                                         1266789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCC--CCCh-----hhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAG--ILSV-----EEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~--~~~~-----~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +  .|||||+|+||+|+|++.....  ...+     ......|+++..+|++.+....||++++++|
T Consensus       165 ~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~  231 (245)
T d2ag5a1         165 FIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAY  231 (245)
T ss_dssp             HGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTT
T ss_pred             hhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCC
Confidence            9  5899999999999998764210  1111     2224567888888888888888888887765

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-38  Score=278.70  Aligned_cols=210  Identities=24%  Similarity=0.227  Sum_probs=169.5

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEE---EEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVV---LTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vi---i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +|+||||||++|||+++|++|+++|++|+   ++.|+.+....+.+..+........+.+++||+++.++++++++++. 
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~-   80 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT-   80 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT-
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc-
Confidence            68999999999999999999999998754   45566555555444444433333349999999999999999988764 


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                       .|.+|+||||||......                       +.+.+.+.|++.+++|+.|+++++++++|+|++++.|+
T Consensus        81 -~g~idilvnnag~~~~~~-----------------------~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~  136 (285)
T d1jtva_          81 -EGRVDVLVCNAGLGLLGP-----------------------LEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGR  136 (285)
T ss_dssp             -TSCCSEEEECCCCCCCSC-----------------------GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             -ccchhhhhhccccccccc-----------------------ccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCc
Confidence             379999999999876542                       23468899999999999999999999999999888899


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||..+..+.                                          ++...|++||+|+.+|+++|+.|+ 
T Consensus       137 Iv~isS~~g~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la~El~  174 (285)
T d1jtva_         137 VLVTGSVGGLMGL------------------------------------------PFNDVYCASKFALEGLCESLAVLLL  174 (285)
T ss_dssp             EEEEEEGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             eEEEechhhcCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999887654                                          778999999999999999999999 


Q ss_pred             -CCcEEEEeeCCeeecCCCCCCC--------------------------------CCChhhhhhhhhhhhccCC
Q 022357          242 -PKFCVNCVCPGFVKTDINFHAG--------------------------------ILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       242 -~~i~vn~v~PG~v~t~~~~~~~--------------------------------~~~~~~~a~~~~~~~~~~~  282 (298)
                       .||+||+|+||+|+|++.....                                ..+|++.|+..+..+..+.
T Consensus       175 ~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~~  248 (285)
T d1jtva_         175 PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPK  248 (285)
T ss_dssp             GGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSS
T ss_pred             ccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCCC
Confidence             4899999999999999864321                                2368888888888776544

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-37  Score=272.85  Aligned_cols=209  Identities=22%  Similarity=0.246  Sum_probs=181.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +|+||++||||||+|||+++|++|+++|++|++++|++++++++.+++......  ....+.+|+++.++++.+.+.+.+
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~   88 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA--SAHYIAGTMEDMTFAEQFVAQAGK   88 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCS--EEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcc--cchhhhhhhhhHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999999998887765443  388899999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      .++.+|+++||||.......                       .+.+.+.+++.+++|+.+++.+++.++|+|++ +.|+
T Consensus        89 ~~g~~~~li~nag~~~~~~~-----------------------~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~-~~G~  144 (269)
T d1xu9a_          89 LMGGLDMLILNHITNTSLNL-----------------------FHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ-SNGS  144 (269)
T ss_dssp             HHTSCSEEEECCCCCCCCCC-----------------------CCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCE
T ss_pred             HhCCcccccccccccccccc-----------------------ccCCHHHhhhheeeehhhHHHHHHHHHHHHHh-cCCc
Confidence            99999999999998754422                       23588999999999999999999999999975 4599


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||.++..+.                                          ++..+|++||+|+++|+++|+.|+ 
T Consensus       145 ii~isS~~~~~~~------------------------------------------p~~~~Y~asKaal~~~~~~La~El~  182 (269)
T d1xu9a_         145 IVVVSSLAGKVAY------------------------------------------PMVAAYSASKFALDGFFSSIRKEYS  182 (269)
T ss_dssp             EEEEEEGGGTSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEeccchhcCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhh
Confidence            9999998887554                                          778999999999999999999997 


Q ss_pred             ---CCcEEEEeeCCeeecCCCCC-------CCCCChhhhhhhhhhhhc
Q 022357          242 ---PKFCVNCVCPGFVKTDINFH-------AGILSVEEGAESPVKLAL  279 (298)
Q Consensus       242 ---~~i~vn~v~PG~v~t~~~~~-------~~~~~~~~~a~~~~~~~~  279 (298)
                         .+|+||+|+||+|+|++...       ....++++.++..+....
T Consensus       183 ~~~~~I~V~~v~PG~v~T~~~~~~~~~~~~~~~~~~e~~a~~i~~~~~  230 (269)
T d1xu9a_         183 VSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGA  230 (269)
T ss_dssp             HHTCCCEEEEEEECCBCCHHHHHHSCGGGGGGCBCHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEEEecCcCCCcHHHHhccCCccccCCCHHHHHHHHHHHhh
Confidence               36999999999999997532       224578888877766554

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-38  Score=272.28  Aligned_cols=225  Identities=21%  Similarity=0.202  Sum_probs=178.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++..      ......+|+.+.++++.....+..
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~~   75 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN------NCVFAPADVTSEKDVQTALALAKG   75 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCT------TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC------Cccccccccccccccccccccccc
Confidence            68999999999999999999999999999999999999988888877643      278889999999999999999999


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC----
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS----  158 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----  158 (298)
                      .++.+|.+++|+++.......                 .+.++.+.+.+.|++.+++|+.++|++++++.|.|..+    
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~  138 (248)
T d2o23a1          76 KFGRVDVAVNCAGIAVASKTY-----------------NLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQ  138 (248)
T ss_dssp             HHSCCCEEEECCCCCCCCCSE-----------------ETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCT
T ss_pred             ccccccccccccccccCCCcc-----------------cccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhc
Confidence            999999999999887654221                 22344456789999999999999999999999998643    


Q ss_pred             --CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHH
Q 022357          159 --DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI  236 (298)
Q Consensus       159 --~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~  236 (298)
                        +.|+||++||..+..+.                                          ++..+|++||+|+++|+|+
T Consensus       139 ~~~~G~Ii~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~  176 (248)
T d2o23a1         139 GGQRGVIINTASVAAFEGQ------------------------------------------VGQAAYSASKGGIVGMTLP  176 (248)
T ss_dssp             TSCCEEEEEECCTHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHH
T ss_pred             cCCceEEEEecchhhccCC------------------------------------------CCchHHHHHHHHHHHHHHH
Confidence              45899999998876544                                          7789999999999999999


Q ss_pred             HHHhC--CCcEEEEeeCCeeecCCCCCCCCC-Chhhhhhhhh-hhhccCCCCCcceEecc
Q 022357          237 LAKRY--PKFCVNCVCPGFVKTDINFHAGIL-SVEEGAESPV-KLALLPDGGPTGRFFLR  292 (298)
Q Consensus       237 la~e~--~~i~vn~v~PG~v~t~~~~~~~~~-~~~~~a~~~~-~~~~~~~~~~~~~~~l~  292 (298)
                      ||.|+  .|||||+|+||+|+|++....+.. ......+.|+ ++..+|+|++....|++
T Consensus       177 la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~  236 (248)
T d2o23a1         177 IARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAII  236 (248)
T ss_dssp             HHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHH
T ss_pred             HHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHH
Confidence            99999  489999999999999986543211 1112223333 45555555555555554

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=3.1e-35  Score=260.25  Aligned_cols=237  Identities=16%  Similarity=0.116  Sum_probs=171.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc-hhhHHHHHHHHhcCCCC---------------cceeEEEeccCcH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDE-KRGLEAVEKLKASGVDP---------------ELLLFHQLDISDL   70 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~-~~~~~~~~~~~~~~~~~---------------~~~~~~~~Dls~~   70 (298)
                      .++|||||++|||+++|++|+++|++|++++|+. +.++++.+++.......               .....+.+|+++.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            5899999999999999999999999999988764 45677777777654332               0123345679999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhh---hhhhhHHHHHhhhhhhceeHHHH
Q 022357           71 ASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSK---VCYQTYELAVECLKTNYYGTKQT  147 (298)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~N~~~~~~l  147 (298)
                      ++++++++.+.+++|+||+||||||...+.+..+.            .+..|..   ..+.....+...+.+|+.+++++
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  150 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN------------DEDGHEPCVGDREAMETATADLFGSNAIAPYFL  150 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------------------HHHHHHHHHHHHHHTHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhC------------CHHHhhhhhhhHHHHHHHHHHHHhhheeeeeee
Confidence            99999999999999999999999998876543332            1222221   12234566778899999999999


Q ss_pred             HHHHhhh------hccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCc
Q 022357          148 CEALIPL------LELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSS  221 (298)
Q Consensus       148 ~~~~~~~------~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (298)
                      ++.+.+.      +.+...++|++++|..+..+.                                          +++.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~~------------------------------------------~~~~  188 (284)
T d1e7wa_         151 IKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------------------------------------------LGYT  188 (284)
T ss_dssp             HHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC------------------------------------------TTCH
T ss_pred             eccccchhhhhHHHhcCCCCcccccccccccCCc------------------------------------------ccee
Confidence            9987765      344456789999997765443                                          6789


Q ss_pred             hhhhHHHHHHHHHHHHHHhC--CCcEEEEeeCCeeecCCCCCCCCCChhhhhhhhh-hhhccCCCCCcceEeccCccCCC
Q 022357          222 AYKVSKAVINAYTRILAKRY--PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPV-KLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       222 ~Y~~sK~al~~l~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~-~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +|++||+|+.+|+|++|.|+  .|||||+|+||++.+...... ........+.|+ ++..+|++++....||+++.++|
T Consensus       189 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~-~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~  267 (284)
T d1e7wa_         189 IYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPP-AVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKY  267 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCH-HHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             eeccccccchhhhHHHHHHhCCccccccccccccccccccCCH-HHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999  489999999998665332111 011112223343 66667777777777777777665

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.9e-35  Score=255.36  Aligned_cols=230  Identities=18%  Similarity=0.149  Sum_probs=186.4

Q ss_pred             cCCCcEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas~--gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .|+||++|||||++  |||+++|+.|+++|++|++++|+++. .+.++++....+.   ....++|+++..++...++.+
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   77 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL-KGRVEEFAAQLGS---DIVLQCDVAEDASIDTMFAEL   77 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTT-HHHHHHHHHHTTC---CCEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHHhhcCC---cceeecccchHHHHHHHHHHh
Confidence            57899999999998  89999999999999999999999654 4444555444333   678899999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.++++|++||||+.........                  ........+.+...+.+|+.+.+.+++++.|.|++  +
T Consensus        78 ~~~~~~~d~~v~~a~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  137 (258)
T d1qsga_          78 GKVWPKFDGFVHSIGFAPGDQLDG------------------DYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--G  137 (258)
T ss_dssp             HTTCSSEEEEEECCCCCCGGGGSS------------------CHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--E
T ss_pred             hhcccccceEEEeecccccccccc------------------cccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC--C
Confidence            999999999999998875432111                  12223566888999999999999999999999964  4


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      +.|+++||..+..+.                                          +.+..|++||+|+++|+|++|.|
T Consensus       138 ~~Ii~iss~~~~~~~------------------------------------------~~~~~Y~~sKaal~~ltr~lA~e  175 (258)
T d1qsga_         138 SALLTLSYLGAERAI------------------------------------------PNYNVMGLAKASLEANVRYMANA  175 (258)
T ss_dssp             EEEEEEECGGGTSBC------------------------------------------TTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEecchhhccCC------------------------------------------CCcHHHHHHHHHHHHHHHHHHHH
Confidence            678999997765443                                          66789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCCCC---ChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAGIL---SVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +  .|||||+|+||+|+|++.......   ......+.|+++..+|++++....||+++.++|
T Consensus       176 l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~~  238 (258)
T d1qsga_         176 MGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAG  238 (258)
T ss_dssp             HTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTT
T ss_pred             hCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            9  489999999999999987543211   112234568888888999999999999988776

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.4e-34  Score=260.43  Aligned_cols=229  Identities=14%  Similarity=0.228  Sum_probs=175.0

Q ss_pred             CCcEEEEeC--CCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCC---------CcceeEE----------
Q 022357            5 TKKYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD---------PELLLFH----------   63 (298)
Q Consensus         5 ~~~~vlITG--as~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~---------~~~~~~~----------   63 (298)
                      .+|++||||  +++|||+++|+.|+++|++|++++++.................         .......          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            369999999  6689999999999999999999999876544444333221110         0011222          


Q ss_pred             ----------EeccCcHHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHH
Q 022357           64 ----------QLDISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELA  133 (298)
Q Consensus        64 ----------~~Dls~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (298)
                                .+|+++.++++++++.+.+.||+||+||||||.....                     ..++.+.+.+.|
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~---------------------~~~~~~~~~~~~  139 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEV---------------------QKDLLNTSRKGY  139 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTT---------------------TSCGGGCCHHHH
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeecccccccccc---------------------CCChhhhhhhhh
Confidence                      2467788899999999999999999999999975431                     113345688999


Q ss_pred             HhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhc
Q 022357          134 VECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIAN  213 (298)
Q Consensus       134 ~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (298)
                      ++.+++|+++++.++|+++|+|++  .|+||++||..+..+.                                      
T Consensus       140 ~~~~~vn~~~~~~~~k~~~~~m~~--~GsIv~iss~~~~~~~--------------------------------------  179 (329)
T d1uh5a_         140 LDALSKSSYSLISLCKYFVNIMKP--QSSIISLTYHASQKVV--------------------------------------  179 (329)
T ss_dssp             HHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSCC--------------------------------------
T ss_pred             hhhcccchhHHHHHHHHHHhhccc--ccccccceeehhcccc--------------------------------------
Confidence            999999999999999999999964  5899999997765432                                      


Q ss_pred             CCCCCC-CchhhhHHHHHHHHHHHHHHhC-C--CcEEEEeeCCeeecCCCCCCC--------------------------
Q 022357          214 RGWCPH-SSAYKVSKAVINAYTRILAKRY-P--KFCVNCVCPGFVKTDINFHAG--------------------------  263 (298)
Q Consensus       214 ~~~~~~-~~~Y~~sK~al~~l~~~la~e~-~--~i~vn~v~PG~v~t~~~~~~~--------------------------  263 (298)
                          ++ ...|++||+|+++|+|+||.|+ +  |||||+|+||+|+|+.....+                          
T Consensus       180 ----p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~  255 (329)
T d1uh5a_         180 ----PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMN  255 (329)
T ss_dssp             ----TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC--------------------------
T ss_pred             ----cccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhhhhhhhcccccccccccc
Confidence                33 4679999999999999999999 4  899999999999995322100                          


Q ss_pred             ---------------CC-----ChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          264 ---------------IL-----SVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       264 ---------------~~-----~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                                     ..     ........|+++..+|++++...+||+|+.++|
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~  310 (329)
T d1uh5a_         256 NSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRA  310 (329)
T ss_dssp             ----------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             ccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence                           00     111223458888999999999999999998876

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.2e-33  Score=244.26  Aligned_cols=207  Identities=13%  Similarity=0.071  Sum_probs=167.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .||+||||||++|||+++|++|+++|++|+++++++.+.             ......+.+|.++.++++.+.+.+.+.+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-------------ASASVIVKMTDSFTEQADQVTAEVGKLL   67 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-------------SSEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------ccccceeecccCcHHHHHHHHHHHHHHh
Confidence            479999999999999999999999999999999876431             1125567788888888888888887765


Q ss_pred             C--CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           85 G--KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        85 g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                      +  ++|+||||||........                      .+.+.+.|++.+++|+.+++++++.++|+|++  .|+
T Consensus        68 ~~~~iD~lInnAG~~~~~~~~----------------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~  123 (236)
T d1dhra_          68 GDQKVDAILCVAGGWAGGNAK----------------------SKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGL  123 (236)
T ss_dssp             TTCCEEEEEECCCCCCCBCTT----------------------CTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEE
T ss_pred             CCCCceEEEECCcccccccch----------------------hcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccc
Confidence            4  799999999965432211                      12467889999999999999999999999964  489


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-  241 (298)
                      ||++||.++..+.                                          ++..+|++||+|+++|+|+||.|+ 
T Consensus       124 Iv~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~la~El~  161 (236)
T d1dhra_         124 LTLAGAKAALDGT------------------------------------------PGMIGYGMAKGAVHQLCQSLAGKNS  161 (236)
T ss_dssp             EEEECCGGGGSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHTSTTS
T ss_pred             eeEEccHHHcCCc------------------------------------------cCCcccHHHHHHHHHHHHHHHHHhc
Confidence            9999998877554                                          778999999999999999999998 


Q ss_pred             ---CCcEEEEeeCCeeecCCCCC-------CCCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          242 ---PKFCVNCVCPGFVKTDINFH-------AGILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       242 ---~~i~vn~v~PG~v~t~~~~~-------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                         .|||||+|+||+|+|++.+.       ..+..|++.++....++.......+|.++
T Consensus       162 ~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~~i~G~~i  220 (236)
T d1dhra_         162 GMPSGAAAIAVLPVTLDTPMNRKSMPEADFSSWTPLEFLVETFHDWITGNKRPNSGSLI  220 (236)
T ss_dssp             SCCTTCEEEEEEESCEECHHHHHHSTTSCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEE
T ss_pred             cCCCcEEEEEEEeccCcCCcchhhCccchhhcCCCHHHHHHHHHHHhCCCccCCCCCeE
Confidence               38999999999999997532       23456888888888877654444455433

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=6.9e-33  Score=242.69  Aligned_cols=235  Identities=20%  Similarity=0.216  Sum_probs=166.6

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-hHHHHHHHHhcCCCCcceeEEEeccC----cHHHHHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-GLEAVEKLKASGVDPELLLFHQLDIS----DLASVSSLADFIK   81 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dls----~~~~v~~~~~~~~   81 (298)
                      .++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++.......  ...+++|+.    ..+.++++++.+.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGS--AVLCKGDLSLSSSLLDCCEDIIDCSF   79 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTC--EEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCc--eEEEecccccchhHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999765 466777777654443  666665554    4567788888899


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC---
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS---  158 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---  158 (298)
                      +++|+||+||||||+..+.+..+.            ....+........+.+...+..|+.+++...+...+.+...   
T Consensus        80 ~~~g~iDilvnnAG~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (266)
T d1mxha_          80 RAFGRCDVLVNNASAYYPTPLLPG------------DDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAW  147 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------------------CHHHHHHHHHHHHTHHHHHHHHHHHHTC------
T ss_pred             HHhCCCCEEEECCccCCCCccccc------------ccccchhcccccccccccccccccccccchhhhhcccccccccc
Confidence            999999999999998876543321            12223333345667788889999999999999888877543   


Q ss_pred             --CCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHH
Q 022357          159 --DSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRI  236 (298)
Q Consensus       159 --~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~  236 (298)
                        ..+.+++++|..+..+                                          .+++..|++||+|+++|+|.
T Consensus       148 ~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~Y~asKaal~~lt~~  185 (266)
T d1mxha_         148 RSRNLSVVNLCDAMTDLP------------------------------------------LPGFCVYTMAKHALGGLTRA  185 (266)
T ss_dssp             -CCCEEEEEECCGGGGSC------------------------------------------CTTCHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhhhhcccccc------------------------------------------CcchhhhhhhHHHHhhhHHH
Confidence              2357777888665543                                          37789999999999999999


Q ss_pred             HHHhC--CCcEEEEeeCCeeecCCCCCCCCCChhhhhhhhhhhh-ccCCCCCcceEeccCccCCC
Q 022357          237 LAKRY--PKFCVNCVCPGFVKTDINFHAGILSVEEGAESPVKLA-LLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       237 la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +|.++  .|||||+|+||+|+|++..... ...+...+.|+.+. .+|++.+....||+++.++|
T Consensus       186 lA~e~~~~gIrVN~I~PG~i~t~~~~~~~-~~~~~~~~~pl~r~~~~peeva~~v~fL~s~~s~~  249 (266)
T d1mxha_         186 AALELAPRHIRVNAVAPGLSLLPPAMPQE-TQEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGY  249 (266)
T ss_dssp             HHHHHGGGTEEEEEEEESSBSCCSSSCHH-HHHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHhCccCcEEEEeccCcEeccccCCHH-HHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhCC
Confidence            99999  4899999999999998653310 01111223344332 34555555555665555544

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.98  E-value=5.3e-33  Score=240.02  Aligned_cols=206  Identities=14%  Similarity=0.069  Sum_probs=162.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH--h
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT--Q   83 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~--~   83 (298)
                      +++||||||++|||+++|++|+++|++|++++|++.+..             .......+|..+.++.....+.+..  .
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------------DSNILVDGNKNWTEQEQSILEQTASSLQ   68 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-------------cccceeccccCchhHHHHHHHHHHHHhc
Confidence            356899999999999999999999999999999875311             1145567888888877777766665  4


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      +++||+||||||........                      .+.+.+.|+.++++|+.+++++++.++|+|++  .|+|
T Consensus        69 ~g~iD~linnAG~~~~~~~~----------------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~I  124 (235)
T d1ooea_          69 GSQVDGVFCVAGGWAGGSAS----------------------SKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLL  124 (235)
T ss_dssp             TCCEEEEEECCCCCCCBCTT----------------------STTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEE
T ss_pred             CCCeeEEEECCccccccccc----------------------ccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEE
Confidence            58999999999975433211                      12456789999999999999999999999974  4899


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      |++||..+..+.                                          ++..+|++||+|+++|+++|+.|+  
T Consensus       125 v~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~l~~~la~e~~~  162 (235)
T d1ooea_         125 QLTGAAAAMGPT------------------------------------------PSMIGYGMAKAAVHHLTSSLAAKDSG  162 (235)
T ss_dssp             EEECCGGGGSCC------------------------------------------TTBHHHHHHHHHHHHHHHHHHSTTSS
T ss_pred             EEeccHHhcCCc------------------------------------------ccccchHHHHHHHHHHHHHHHHHhcc
Confidence            999998876554                                          778999999999999999999998  


Q ss_pred             --CCcEEEEeeCCeeecCCCCC-------CCCCChhhhhhhhhhhhccCC-CCCcceEe
Q 022357          242 --PKFCVNCVCPGFVKTDINFH-------AGILSVEEGAESPVKLALLPD-GGPTGRFF  290 (298)
Q Consensus       242 --~~i~vn~v~PG~v~t~~~~~-------~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~  290 (298)
                        .+|+||+|+||+++|++.+.       ..+.+|++.++..+..+..+. ...+|.++
T Consensus       163 ~~~~i~v~~i~Pg~~~T~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i  221 (235)
T d1ooea_         163 LPDNSAVLTIMPVTLDTPMNRKWMPNADHSSWTPLSFISEHLLKWTTETSSRPSSGALL  221 (235)
T ss_dssp             CCTTCEEEEEEESCBCCHHHHHHSTTCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEE
T ss_pred             CCCceEEEEEecCcCcCcchhhhCcCCccccCCCHHHHHHHHHHHhcCccccCCCceEE
Confidence              38899999999999987532       234578888888766554433 33455444

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.98  E-value=9.6e-33  Score=243.26  Aligned_cols=229  Identities=17%  Similarity=0.189  Sum_probs=167.7

Q ss_pred             cCCCcEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas~--gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|++ ++.+.++++.+.+..   ..++++|+++.++++++++++
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~-~~~~~~~~l~~~~~~---~~~~~~d~~~~~~~~~~~~~~   77 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELNS---PYVYELDVSKEEHFKSLYNSV   77 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST-TTHHHHHHHHHHTTC---CCEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHhhCCc---eeEeeecccchhhHHHHHHHH
Confidence            58899999999765  999999999999999999999995 455566666665554   678899999999999999999


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+.+|++|++|||+|........+.                   ........+...+.++.++.+.+.+...+.++  ..
T Consensus        78 ~~~~g~id~lV~nag~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  136 (274)
T d2pd4a1          78 KKDLGSLDFIVHSVAFAPKEALEGS-------------------LLETSKSAFNTAMEISVYSLIELTNTLKPLLN--NG  136 (274)
T ss_dssp             HHHTSCEEEEEECCCCCCGGGGSSC-------------------GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EE
T ss_pred             HHHcCCCCeEEeecccccccccccc-------------------cccccchhhhhhhccccccccccccccccccc--cC
Confidence            9999999999999998754322221                   11223344555566666666666666665542  22


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      +.|+++||.....                                          +.+....|++||+|+.+|+|+++.|
T Consensus       137 ~~i~~~s~~~~~~------------------------------------------~~~~~~~y~asK~al~~ltr~lA~e  174 (274)
T d2pd4a1         137 ASVLTLSYLGSTK------------------------------------------YMAHYNVMGLAKAALESAVRYLAVD  174 (274)
T ss_dssp             EEEEEEECGGGTS------------------------------------------BCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceeeeccccccc------------------------------------------ccccchhhhHHHHHHHHHHHhhHHH
Confidence            3455555543332                                          2266789999999999999999999


Q ss_pred             C--CCcEEEEeeCCeeecCCCCCCCC---CChhhhhhhhhhhhccCCCCCcceEeccCccCCC
Q 022357          241 Y--PKFCVNCVCPGFVKTDINFHAGI---LSVEEGAESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       241 ~--~~i~vn~v~PG~v~t~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +  .|||||+|+||++.|++......   .........|+++..+|++++...+||+|+.++|
T Consensus       175 ~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~  237 (274)
T d2pd4a1         175 LGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSG  237 (274)
T ss_dssp             HHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             hcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCC
Confidence            9  58999999999999998754321   1111223456667777777777777777776654

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.98  E-value=4.4e-33  Score=247.98  Aligned_cols=232  Identities=17%  Similarity=0.172  Sum_probs=174.0

Q ss_pred             cCCCcEEEEeCCCC--chhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCC---------CCcceeEEEec-----
Q 022357            3 EATKKYAVVTGSNK--GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGV---------DPELLLFHQLD-----   66 (298)
Q Consensus         3 ~~~~~~vlITGas~--gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~---------~~~~~~~~~~D-----   66 (298)
                      +|+||++|||||+|  |||+++|++|+++|++|++++|++...............         .........+|     
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence            48999999999876  999999999999999999999986543332222211110         00001222333     


Q ss_pred             ---------------cCcHHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHH
Q 022357           67 ---------------ISDLASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYE  131 (298)
Q Consensus        67 ---------------ls~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (298)
                                     .++..+++++++.+.++||+||+||||||.....                     ..++.+.+.+
T Consensus        85 ~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~---------------------~~~~~~~~~~  143 (297)
T d1d7oa_          85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEV---------------------SKPLLETSRK  143 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTT---------------------TSCGGGCCHH
T ss_pred             cccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCccccccccccccc---------------------ccchhhhhcc
Confidence                           3556677899999999999999999999975321                     1234457889


Q ss_pred             HHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhh
Q 022357          132 LAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEI  211 (298)
Q Consensus       132 ~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (298)
                      +|++.+++|+.+++.++++++|.|.++  |+++++++......                                     
T Consensus       144 ~~~~~~~vn~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~-------------------------------------  184 (297)
T d1d7oa_         144 GYLAAISASSYSFVSLLSHFLPIMNPG--GASISLTYIASERI-------------------------------------  184 (297)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSC-------------------------------------
T ss_pred             cccccccchhhhhhhhhhHHHHHhhcC--Ccceeeeehhhccc-------------------------------------
Confidence            999999999999999999999998754  56777766554322                                     


Q ss_pred             hcCCCCCCCchhhhHHHHHHHHHHHHHHhC---CCcEEEEeeCCeeecCCCCCCCCC---ChhhhhhhhhhhhccCCCCC
Q 022357          212 ANRGWCPHSSAYKVSKAVINAYTRILAKRY---PKFCVNCVCPGFVKTDINFHAGIL---SVEEGAESPVKLALLPDGGP  285 (298)
Q Consensus       212 ~~~~~~~~~~~Y~~sK~al~~l~~~la~e~---~~i~vn~v~PG~v~t~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~  285 (298)
                          ..+....|+++|+++..+++.++.++   .|||||+|+||+|.|++.......   ........|+++..+|++++
T Consensus       185 ----~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA  260 (297)
T d1d7oa_         185 ----IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVG  260 (297)
T ss_dssp             ----CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHH
T ss_pred             ----ccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCCCCCCCCHHHHH
Confidence                22556789999999999999999998   389999999999999987543211   11223456888888899999


Q ss_pred             cceEeccCccCCC
Q 022357          286 TGRFFLRKEEAPF  298 (298)
Q Consensus       286 ~~~~~l~~~~a~~  298 (298)
                      ....||+|+.++|
T Consensus       261 ~~v~fL~S~~a~~  273 (297)
T d1d7oa_         261 NAAAFLVSPLASA  273 (297)
T ss_dssp             HHHHHHTSGGGTT
T ss_pred             HHHHHHhCchhcC
Confidence            9999999988876

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.97  E-value=4.5e-32  Score=237.98  Aligned_cols=228  Identities=17%  Similarity=0.166  Sum_probs=170.0

Q ss_pred             cCCCcEEEEeC--CCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            3 EATKKYAVVTG--SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITG--as~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .|+||++||||  |++|||+++|++|+++|++|++++|+..++.+.   +.+..+.  ....++||+++.++++++++.+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~---~~~~~~~--~~~~~~~dv~~~~~~~~~~~~v   77 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQR---ITDRLPA--KAPLLELDVQNEEHLASLAGRV   77 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHH---HHTTSSS--CCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHH---HHHHcCC--ceeeEeeecccccccccccchh
Confidence            57899999999  467999999999999999999999998765332   2222222  2778899999999999999998


Q ss_pred             HHhc---CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhcc
Q 022357           81 KTQF---GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLEL  157 (298)
Q Consensus        81 ~~~~---g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~  157 (298)
                      .+.+   +.+|++|||+|..+...                  ....++.+.+.+.+...+.+|+.+.+...+...+.+..
T Consensus        78 ~~~~~~~~~ld~~i~~ag~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (268)
T d2h7ma1          78 TEAIGAGNKLDGVVHSIGFMPQTG------------------MGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP  139 (268)
T ss_dssp             HHHHCTTCCEEEEEECCCCCCGGG------------------STTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred             hhccccCCCcceeeecccccCccc------------------cccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc
Confidence            7765   57999999999765321                  12234456788999999999999999999999887643


Q ss_pred             CCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH
Q 022357          158 SDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       158 ~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l  237 (298)
                         +.+++++|.....+                                          .++...|+++|+|+.+|+|++
T Consensus       140 ---~~~i~~~s~~~~~~------------------------------------------~p~~~~y~~sK~a~~~ltr~l  174 (268)
T d2h7ma1         140 ---GGSIVGMDFDPSRA------------------------------------------MPAYNWMTVAKSALESVNRFV  174 (268)
T ss_dssp             ---EEEEEEEECCCSSC------------------------------------------CTTTHHHHHHHHHHHHHHHHH
T ss_pred             ---cccccccccccccc------------------------------------------Ccccchhhccccchhhccccc
Confidence               34444544443322                                          267889999999999999999


Q ss_pred             HHhC--CCcEEEEeeCCeeecCCCCCCC--CCC-----------hhhhhhhhhhh-hccCCCCCcceEeccCccCCC
Q 022357          238 AKRY--PKFCVNCVCPGFVKTDINFHAG--ILS-----------VEEGAESPVKL-ALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       238 a~e~--~~i~vn~v~PG~v~t~~~~~~~--~~~-----------~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      +.|+  .+||||+|+||+|+|++.....  ...           .....+.|+.+ ..+|++++....||+||.++|
T Consensus       175 A~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~  251 (268)
T d2h7ma1         175 AREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPA  251 (268)
T ss_dssp             HHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTT
T ss_pred             hhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcC
Confidence            9999  5899999999999998653210  000           01112345544 666777777777888777765

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=3.4e-32  Score=234.83  Aligned_cols=208  Identities=20%  Similarity=0.133  Sum_probs=161.5

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .|++|||||++|||+++|++|+++|++|++++|+++.               .....+++|+++...+..+.......+ 
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~---------------~~~~~~~~d~~~~~~~~~~~~~~~~~~-   64 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG---------------EDLIYVEGDVTREEDVRRAVARAQEEA-   64 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS---------------SSSEEEECCTTCHHHHHHHHHHHHHHS-
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc---------------ccceEeeccccchhhhHHHHHhhhccc-
Confidence            4899999999999999999999999999999998642               126788999999999999888776664 


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhh------hccCC
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPL------LELSD  159 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~------~~~~~  159 (298)
                      ..+.++++++.........                   .....+.+.+++.+++|+.+++.+++.+.+.      |.+++
T Consensus        65 ~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~  125 (241)
T d1uaya_          65 PLFAVVSAAGVGLAEKILG-------------------KEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQ  125 (241)
T ss_dssp             CEEEEEECCCCCCCCCSBC-------------------SSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSC
T ss_pred             cccchhhhhhccccccccc-------------------cccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccC
Confidence            4556666666543321111                   1112466788899999999999999999988      44456


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      .|+||++||..+..+.                                          ++..+|++||+|+.+|+|+||.
T Consensus       126 ~G~Ii~isS~~~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~  163 (241)
T d1uaya_         126 RGVIVNTASVAAFEGQ------------------------------------------IGQAAYAASKGGVVALTLPAAR  163 (241)
T ss_dssp             SEEEEEECCTHHHHCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeeeeecchhhccCC------------------------------------------CCchhhHHHHHHHHHHHHHHHH
Confidence            7999999998887554                                          7789999999999999999999


Q ss_pred             hC--CCcEEEEeeCCeeecCCCCCC----------------CCCChhhhhhhhhhhhccCCCCCcceEecc
Q 022357          240 RY--PKFCVNCVCPGFVKTDINFHA----------------GILSVEEGAESPVKLALLPDGGPTGRFFLR  292 (298)
Q Consensus       240 e~--~~i~vn~v~PG~v~t~~~~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~  292 (298)
                      |+  .|||||+|+||+|+|++....                ..-+|++.+...++++..  ...+|..+..
T Consensus       164 ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s~--~~iTG~~i~V  232 (241)
T d1uaya_         164 ELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--PMLNGEVVRL  232 (241)
T ss_dssp             HHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC--TTCCSCEEEE
T ss_pred             HHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhC--CCCCCCEEEE
Confidence            99  489999999999999875331                123777777777776652  2345555443

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.96  E-value=1.1e-28  Score=215.54  Aligned_cols=202  Identities=20%  Similarity=0.150  Sum_probs=160.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc---hhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE---KRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .++++|||||++|||+++|++|+++|+ +|++++|+.   +...+..++++..+..   +.+++||+++.++++++++.+
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~---v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGAR---TTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCE---EEEEECCTTCHHHHHHHHHTS
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhcccc---ccccccccchHHHHHHhhccc
Confidence            467999999999999999999999999 588899874   3456667777766543   899999999999999999887


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                      .+. +++|.||||+|.....+                       +.+.+.+.++..+++|+.+++++.+.+.+    .+.
T Consensus        85 ~~~-~~i~~vv~~ag~~~~~~-----------------------~~~~~~~~~~~~~~~~~~g~~~l~~~~~~----~~~  136 (259)
T d2fr1a1          85 GDD-VPLSAVFHAAATLDDGT-----------------------VDTLTGERIERASRAKVLGARNLHELTRE----LDL  136 (259)
T ss_dssp             CTT-SCEEEEEECCCCCCCCC-----------------------GGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCC
T ss_pred             ccc-ccccccccccccccccc-----------------------cccccHHHHHHHhhhhccchhHHHHHhhc----cCC
Confidence            554 68999999999875542                       23468888999999999999999887654    356


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      ++||++||+.+..+.                                          +++..|+++|++++.|++.++.+
T Consensus       137 ~~iv~~SS~a~~~g~------------------------------------------~~~~~YaAaka~l~~la~~~~~~  174 (259)
T d2fr1a1         137 TAFVLFSSFASAFGA------------------------------------------PGLGGYAPGNAYLDGLAQQRRSD  174 (259)
T ss_dssp             SEEEEEEEHHHHTCC------------------------------------------TTCTTTHHHHHHHHHHHHHHHHT
T ss_pred             ceEeeecchhhccCC------------------------------------------cccHHHHHHHHhHHHHHHHHHhC
Confidence            899999999887654                                          77899999999999999988765


Q ss_pred             CCCcEEEEeeCCeeecCCC-CC----------CCCCChhhhhhhhhhhhccC
Q 022357          241 YPKFCVNCVCPGFVKTDIN-FH----------AGILSVEEGAESPVKLALLP  281 (298)
Q Consensus       241 ~~~i~vn~v~PG~v~t~~~-~~----------~~~~~~~~~a~~~~~~~~~~  281 (298)
                        |+++++|+||++.++.. ..          ...++++++++.....+...
T Consensus       175 --Gi~v~~I~pg~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~l~~~l~~~  224 (259)
T d2fr1a1         175 --GLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRA  224 (259)
T ss_dssp             --TCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHHHHHHTT
T ss_pred             --CCCEEECCCCcccCCccccchHHHHHHhcCCCCCCHHHHHHHHHHHHhCC
Confidence              89999999998865422 11          12467888887766655543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.95  E-value=8e-29  Score=215.63  Aligned_cols=227  Identities=20%  Similarity=0.211  Sum_probs=154.0

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc-C
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF-G   85 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~-g   85 (298)
                      |+||||||++|||+++|++|+++|++|++++|+..+                    ..+|+++.+..+.....+.... +
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~--------------------~~~d~~~~~~~~~~~~~~~~~~~~   61 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------------VIADLSTAEGRKQAIADVLAKCSK   61 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS--------------------EECCTTSHHHHHHHHHHHHTTCTT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH--------------------HHHHhcCHHHHHHHHHHHHHHhCC
Confidence            799999999999999999999999999999997542                    3578999988887766665544 5


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      .+|++|+|||+...                              .+.+.....+|..+...+.+...+.+.+.....+.+
T Consensus        62 ~id~lv~~Ag~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (257)
T d1fjha_          62 GMDGLVLCAGLGPQ------------------------------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVV  111 (257)
T ss_dssp             CCSEEEECCCCCTT------------------------------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             CCcEEEEcCCCCCc------------------------------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccee
Confidence            79999999997532                              233456678999999999999999998777778888


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhh-hhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--C
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGE-IANRGWCPHSSAYKVSKAVINAYTRILAKRY--P  242 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--~  242 (298)
                      +++.....-......          ..     .....-....-.. ....+.++...+|++||+|+++|+|++|.|+  .
T Consensus       112 ~~~~~~~~~~~~~~~----------~~-----~~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~  176 (257)
T d1fjha_         112 ISSVASAHLAFDKNP----------LA-----LALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEA  176 (257)
T ss_dssp             ECCGGGGSSCGGGCT----------TH-----HHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred             eeeccccchhhhhhh----------hh-----hhccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccc
Confidence            777554321100000          00     0000000000000 1111223345679999999999999999999  6


Q ss_pred             CcEEEEeeCCeeecCCCCCCC--CCChhhhh--hhhhhhhccCCCCCcceEeccCccCCC
Q 022357          243 KFCVNCVCPGFVKTDINFHAG--ILSVEEGA--ESPVKLALLPDGGPTGRFFLRKEEAPF  298 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~~~~~~--~~~~~~~a--~~~~~~~~~~~~~~~~~~~l~~~~a~~  298 (298)
                      |||||+|+||+|+|++.....  ....+...  ..|+++..+|+|++....||+|+.++|
T Consensus       177 gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~p~eva~~v~fL~S~~s~~  236 (257)
T d1fjha_         177 GVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASY  236 (257)
T ss_dssp             TCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHHHTSGGGTT
T ss_pred             cccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            899999999999999875321  11112222  258999999999999999999998876

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=2.7e-19  Score=162.18  Aligned_cols=188  Identities=18%  Similarity=0.047  Sum_probs=131.0

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhh-HHHHHHHH-hcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG-LEAVEKLK-ASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~-~~~~~~~~-~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .|+||||||||.||++++++|+++|++|++++|..... ...++.+. .......++.++++|++|.++++++++..   
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence            48999999999999999999999999999999864321 11112221 11112224899999999999999998866   


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        .+|+++|+|+.....                           ...++..+.+++|+.|+.++++++...-. .+..++
T Consensus        78 --~~d~v~h~aa~~~~~---------------------------~~~~~~~~~~~~Nv~gt~nllea~~~~~~-~~~~r~  127 (357)
T d1db3a_          78 --QPDEVYNLGAMSHVA---------------------------VSFESPEYTADVDAMGTLRLLEAIRFLGL-EKKTRF  127 (357)
T ss_dssp             --CCSEEEECCCCCTTT---------------------------TTTSCHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEE
T ss_pred             --CCCEEEEeecccccc---------------------------hhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCCcEE
Confidence              789999999986543                           12344456789999999999999865421 233589


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      |++||..-.... .                              ...+.+..++.....|+.||.+.+.+++.++..+ +
T Consensus       128 i~~SS~~vYG~~-~------------------------------~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~-~  175 (357)
T d1db3a_         128 YQASTSELYGLV-Q------------------------------EIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY-G  175 (357)
T ss_dssp             EEEEEGGGGTTC-C------------------------------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-C
T ss_pred             EEEEchhhhCCC-C------------------------------CCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh-C
Confidence            999996533111 0                              0112233333446789999999999999999886 6


Q ss_pred             cEEEEeeCCeeecCC
Q 022357          244 FCVNCVCPGFVKTDI  258 (298)
Q Consensus       244 i~vn~v~PG~v~t~~  258 (298)
                      +.+..+.|+.|..|.
T Consensus       176 l~~~ilR~~~vyGp~  190 (357)
T d1db3a_         176 MYACNGILFNHESPR  190 (357)
T ss_dssp             CCEEEEEECCEECTT
T ss_pred             CCEEEEEeccccCCC
Confidence            888888888777763

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.79  E-value=1.3e-20  Score=156.65  Aligned_cols=115  Identities=16%  Similarity=0.062  Sum_probs=95.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+++++..+++.....    +....+|+++.+++++++     
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~d~~~~~~~~~~~-----   90 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK----VNVTAAETADDASRAEAV-----   90 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHT----CCCEEEECCSHHHHHHHT-----
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccc----hhhhhhhcccHHHHHHHh-----
Confidence            68999999999999999999999999999999999999999999888876432    567889999999887765     


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhh
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLL  155 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~  155 (298)
                        +++|+||||||....                           ..+.+.|+..+++|+.+.++.+..+.+.+
T Consensus        91 --~~iDilin~Ag~g~~---------------------------~~~~e~~~~~~~~nv~~~~~~~~~~~~~~  134 (191)
T d1luaa1          91 --KGAHFVFTAGAIGLE---------------------------LLPQAAWQNESSIEIVADYNAQPPLGIGG  134 (191)
T ss_dssp             --TTCSEEEECCCTTCC---------------------------CBCHHHHHTCTTCCEEEECCCSSSCSBTT
T ss_pred             --cCcCeeeecCccccc---------------------------cCCHHHHHhhhcceeehhHhhHHHHHHHh
Confidence              589999999996421                           14678888899999999887665554433

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=3.8e-18  Score=153.21  Aligned_cols=183  Identities=18%  Similarity=0.117  Sum_probs=134.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      ++|||||+|.||++++++|+++|++|++++|..................  .+.++++|++|.+.+.++++..     ++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTS--CCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCC--CCEEEEeecCCHHHHHHHHhcc-----CC
Confidence            5999999999999999999999999999987433222222222211111  2889999999999998888754     78


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+|||+|+.....                           ...+...+.+++|+.|+.++++++...    +-.++|++|
T Consensus        75 d~ViHlAa~~~~~---------------------------~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~v~~~i~~S  123 (338)
T d1udca_          75 DTVIHFAGLKAVG---------------------------ESVQKPLEYYDNNVNGTLRLISAMRAA----NVKNFIFSS  123 (338)
T ss_dssp             SEEEECCSCCCHH---------------------------HHHHCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEE
T ss_pred             CEEEECCCccchh---------------------------hHHhCHHHHHHhHHHHHHHHHHHHHHh----CCCEEEecC
Confidence            9999999965321                           244455678999999999999998764    345899998


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcC-CCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANR-GWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      |.........                               ....+. ........|+.+|.+.+.+++....++.++.+
T Consensus       124 s~~vy~~~~~-------------------------------~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~  172 (338)
T d1udca_         124 SATVYGDQPK-------------------------------IPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI  172 (338)
T ss_dssp             EGGGGCSCCS-------------------------------SSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred             cceEEccccc-------------------------------cccccccccCCCcchHHHHHhhhhHHHHHHHhhccCCeE
Confidence            8765533210                               000111 12234678999999999999999998889999


Q ss_pred             EEeeCCeeecCCC
Q 022357          247 NCVCPGFVKTDIN  259 (298)
Q Consensus       247 n~v~PG~v~t~~~  259 (298)
                      ..+.|+.|..+..
T Consensus       173 ~ilR~~~v~G~~~  185 (338)
T d1udca_         173 ALLRYFNPVGAHP  185 (338)
T ss_dssp             EEEEECEEECCCT
T ss_pred             EEEeeccEEeccC
Confidence            9999999887643

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.75  E-value=1.1e-17  Score=150.50  Aligned_cols=202  Identities=21%  Similarity=0.161  Sum_probs=136.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .||+||||||+|.||++++++|+++|++|+++.|+..+............. ......+..|+++.+++..++.      
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP-GRFETAVVEDMLKQGAYDEVIK------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST-TTEEEEECSCTTSTTTTTTTTT------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhcccc-ccccEEEeccccchhhhhhhcc------
Confidence            579999999999999999999999999999999998765555443332222 1225567789999988776653      


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       .+|.++|+++.....                              ......+..|+.|+.++++++...   ....++|
T Consensus        83 -~~~~v~~~a~~~~~~------------------------------~~~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i  128 (342)
T d1y1pa1          83 -GAAGVAHIASVVSFS------------------------------NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFV  128 (342)
T ss_dssp             -TCSEEEECCCCCSCC------------------------------SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEE
T ss_pred             -cchhhhhhccccccc------------------------------ccccccccchhhhHHHHHHhhhcc---ccccccc
Confidence             689999999875422                              112245778999999999988663   2346999


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-CC
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PK  243 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-~~  243 (298)
                      ++||..+.....+ ..+..+.+...+..........          ..+..+......|+.||.+.+.+++.++..+ .+
T Consensus       129 ~~SS~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~----------~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~  197 (342)
T d1y1pa1         129 LTSSTVSALIPKP-NVEGIYLDEKSWNLESIDKAKT----------LPESDPQKSLWVYAASKTEAELAAWKFMDENKPH  197 (342)
T ss_dssp             EECCGGGTCCCCT-TCCCCEECTTCCCHHHHHHHHH----------SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred             ccccceeeccCCC-CCCCcccccccccccccccccc----------ccccCCCCCcCcccchhHhHHHHHHHhhhhcccc
Confidence            9999765433211 1111112222222222111111          1122222335679999999999999998876 57


Q ss_pred             cEEEEeeCCeeecCC
Q 022357          244 FCVNCVCPGFVKTDI  258 (298)
Q Consensus       244 i~vn~v~PG~v~t~~  258 (298)
                      +++..|.|+.+..|.
T Consensus       198 ~~~~~i~p~~v~Gp~  212 (342)
T d1y1pa1         198 FTLNAVLPNYTIGTI  212 (342)
T ss_dssp             SEEEEEEESEEECCC
T ss_pred             cccceecccceeCCC
Confidence            889999999887764

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.73  E-value=3.8e-17  Score=146.99  Aligned_cols=187  Identities=18%  Similarity=0.132  Sum_probs=130.3

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .|+||||||||.||++++++|+++|++|+++++..................  .+.++++|++|.+++++++...     
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~--~v~~~~~Dl~d~~~l~~~~~~~-----   73 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH--HIPFYEVDLCDRKGLEKVFKEY-----   73 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTS--CCCEEECCTTCHHHHHHHHHHS-----
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhccc--CCeEEEeecCCHHHHHHHHhcc-----
Confidence            378999999999999999999999999999876433211211111111111  2888999999999998887643     


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|+|||+|+.....                           ...+.....+.+|+.++.++++++...    +..++|+
T Consensus        74 ~~d~VihlAa~~~~~---------------------------~~~~~~~~~~~~N~~~t~~ll~~~~~~----~i~~~i~  122 (347)
T d1z45a2          74 KIDSVIHFAGLKAVG---------------------------ESTQIPLRYYHNNILGTVVLLELMQQY----NVSKFVF  122 (347)
T ss_dssp             CCCEEEECCSCCCHH---------------------------HHHHSHHHHHHHHHHHHHHHHHHHHHH----TCCEEEE
T ss_pred             CCCEEEEcccccccc---------------------------ccccCcccccccchhhhHHHHHHHHhc----ccceEEe
Confidence            799999999976432                           233444567889999999999998652    3358999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC-CCc
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY-PKF  244 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~-~~i  244 (298)
                      +||..........                           .......+..+......|+.||.+.+.+++.+.... .++
T Consensus       123 ~SS~~vyg~~~~~---------------------------~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~  175 (347)
T d1z45a2         123 SSSATVYGDATRF---------------------------PNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSW  175 (347)
T ss_dssp             EEEGGGGCCGGGS---------------------------TTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSC
T ss_pred             ecceeeecCcccC---------------------------CCCCccccccCCCCCChhHhHHHHHHHHHHHHHHhhccCC
Confidence            9997755321000                           000112222333446789999999999999998765 577


Q ss_pred             EEEEeeCCeeecC
Q 022357          245 CVNCVCPGFVKTD  257 (298)
Q Consensus       245 ~vn~v~PG~v~t~  257 (298)
                      .+..+.|+.+..+
T Consensus       176 ~~~~lR~~~v~g~  188 (347)
T d1z45a2         176 KFAILRYFNPIGA  188 (347)
T ss_dssp             EEEEEEECEEECC
T ss_pred             cEEEEeecceEee
Confidence            7777777766543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=7.1e-17  Score=144.70  Aligned_cols=184  Identities=16%  Similarity=0.024  Sum_probs=129.1

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh-----hHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR-----GLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      |+||||||+|.||++++.+|+++|++|+.++|....     .+...........  ..+.++.+|++|.+.+..+++.. 
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~-   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE--GNMKLHYGDLTDSTCLVKIINEV-   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-----------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhcc--CCcEEEEeecCCchhhHHHHhhc-
Confidence            445999999999999999999999999999986432     2221111111111  23899999999999999988765 


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                          .+++++|.|+.....                           ...+.....+++|+.|+.++++++...-. .+..
T Consensus        79 ----~~~~v~~~~a~~~~~---------------------------~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~  126 (347)
T d1t2aa_          79 ----KPTEIYNLGAQSHVK---------------------------ISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSV  126 (347)
T ss_dssp             ----CCSEEEECCSCCCHH---------------------------HHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTC
T ss_pred             ----ccceeeeeeeccccc---------------------------hhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCc
Confidence                788999998865432                           23344456689999999999999876532 1235


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      ++|++||.+-....                               ....+.+..++.....|+.||.+.+.+++.++..+
T Consensus       127 ~~i~~SS~~vyg~~-------------------------------~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~  175 (347)
T d1t2aa_         127 KFYQASTSELYGKV-------------------------------QEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY  175 (347)
T ss_dssp             EEEEEEEGGGTCSC-------------------------------SSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecchheecCC-------------------------------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            89999986533211                               01112233444556789999999999999988775


Q ss_pred             CCcEEEEeeCCeeecC
Q 022357          242 PKFCVNCVCPGFVKTD  257 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~  257 (298)
                       ++.+..+.|+.+..|
T Consensus       176 -~~~~~ilr~~~vyGp  190 (347)
T d1t2aa_         176 -NLFAVNGILFNHESP  190 (347)
T ss_dssp             -CCEEEEEEECCEECT
T ss_pred             -CCCEEEEEecceeCC
Confidence             777777887766665

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=7.3e-17  Score=144.03  Aligned_cols=186  Identities=19%  Similarity=0.077  Sum_probs=131.3

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-----hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-----RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      .|++|||||||.||++++++|+++|++|+.++|...     +...+........  ...+.++.+|+++.+++.+.++..
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Di~~~~~~~~~~~~~   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVN--KALMKLHYADLTDASSLRRWIDVI   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhcc--ccceEEEEccccCHHHHHHHHhhh
Confidence            489999999999999999999999999999998532     2222221111111  123889999999999999888754


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC-C
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-D  159 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~  159 (298)
                           ++|+|||+|+.....                           ...+.....+..|+.++..++.++....... .
T Consensus        79 -----~~D~Vih~Aa~~~~~---------------------------~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~  126 (339)
T d1n7ha_          79 -----KPDEVYNLAAQSHVA---------------------------VSFEIPDYTADVVATGALRLLEAVRSHTIDSGR  126 (339)
T ss_dssp             -----CCSEEEECCSCCCHH---------------------------HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC
T ss_pred             -----ccchhhhcccccccc---------------------------ccccCccccccccccccchhhhhhhhccccccc
Confidence                 899999999976432                           2345566788999999999998887654332 2


Q ss_pred             CCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHH
Q 022357          160 SPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAK  239 (298)
Q Consensus       160 ~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~  239 (298)
                      ..++++.||.......                                .....+..+......|+.+|.+.+.++..++.
T Consensus       127 ~~~~~~~ss~~~~~~~--------------------------------~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~  174 (339)
T d1n7ha_         127 TVKYYQAGSSEMFGST--------------------------------PPPQSETTPFHPRSPYAASKCAAHWYTVNYRE  174 (339)
T ss_dssp             CCEEEEEEEGGGGTTS--------------------------------CSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             ceeeeecccceecccC--------------------------------CCCCCCCCCCCCcchhhHHHHHHHHHHHHHHH
Confidence            2345555554332211                                11122333345578999999999999999887


Q ss_pred             hCCCcEEEEeeCCeeecCC
Q 022357          240 RYPKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       240 e~~~i~vn~v~PG~v~t~~  258 (298)
                      .+ ++.+..+.|+.|..|.
T Consensus       175 ~~-~~~~~ilR~~~vyGp~  192 (339)
T d1n7ha_         175 AY-GLFACNGILFNHESPR  192 (339)
T ss_dssp             HH-CCEEEEEEECCEECTT
T ss_pred             Hh-CCCEEEEEEccccCCC
Confidence            75 7889999998887764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.70  E-value=3.7e-16  Score=142.63  Aligned_cols=199  Identities=16%  Similarity=0.045  Sum_probs=130.3

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc----------------hhhHHHHHHHHhcCCCCcceeEEEeccCc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE----------------KRGLEAVEKLKASGVDPELLLFHQLDISD   69 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~Dls~   69 (298)
                      |++||||||||.||.+++++|+++|++|++++.-.                ................  .+.++++|++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~Dl~d   78 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGK--SIELYVGDICD   78 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCC--CCEEEESCTTS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCC--CcEEEEccCCC
Confidence            68899999999999999999999999999987211                1112222222222222  28999999999


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHH
Q 022357           70 LASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCE  149 (298)
Q Consensus        70 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  149 (298)
                      .+.++++++..     ++|+|+|.|+......                        ...+.+.....+.+|+.|+.++++
T Consensus        79 ~~~l~~~~~~~-----~~d~ViHlAa~~~~~~------------------------s~~~~~~~~~~~~~Nv~gt~nll~  129 (393)
T d1i24a_          79 FEFLAESFKSF-----EPDSVVHFGEQRSAPY------------------------SMIDRSRAVYTQHNNVIGTLNVLF  129 (393)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCCHHH------------------------HTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhh-----cchheecccccccccc------------------------ccccccccccccccccccccHHHH
Confidence            99999998866     7999999998764321                        112445566788999999999999


Q ss_pred             HHhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhh-hhhcCCCCCCCchhhhHHH
Q 022357          150 ALIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG-EIANRGWCPHSSAYKVSKA  228 (298)
Q Consensus       150 ~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Y~~sK~  228 (298)
                      ++...   +...++++.||.........+. .....                  ...+++ ......+......|+.||.
T Consensus       130 ~~~~~---~~~~~~i~~ss~~~~~~~~~~~-~~~~~------------------~~~~~~~~~~~~~~~~p~~~Y~~sK~  187 (393)
T d1i24a_         130 AIKEF---GEECHLVKLGTMGEYGTPNIDI-EEGYI------------------TITHNGRTDTLPYPKQASSFYHLSKV  187 (393)
T ss_dssp             HHHHH---CTTCEEEEECCGGGGCCCSSCB-CSSEE------------------EEEETTEEEEEECCCCCCSHHHHHHH
T ss_pred             HHHHh---ccccceeecccccccccccccc-ccccc------------------cccccccccccccccccccHHHHHhh
Confidence            88754   2224566666654432210000 00000                  000000 0000012233568999999


Q ss_pred             HHHHHHHHHHHhCCCcEEEEeeCCeeecCC
Q 022357          229 VINAYTRILAKRYPKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       229 al~~l~~~la~e~~~i~vn~v~PG~v~t~~  258 (298)
                      +.+.+++.++.++ ++.+.++.|+.+..+.
T Consensus       188 ~aE~~~~~~~~~~-~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         188 HDSHNIAFTCKAW-GIRATDLNQGVVYGVK  216 (393)
T ss_dssp             HHHHHHHHHHHHH-CCEEEEEEECEEECSC
T ss_pred             hhccccccccccc-ceeeeecccccccCCC
Confidence            9999999888775 8888889888887753

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=3.5e-16  Score=140.38  Aligned_cols=183  Identities=19%  Similarity=0.106  Sum_probs=130.4

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEec------CchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTAR------DEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |+||||||||.||++++++|+++|++|++++|      .........+.+......  ++.++++|++|.+.+++++...
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGR--SVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTC--CCEEEECCTTCHHHHHHHHHHC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCC--CcEEEEeecccccccccccccc
Confidence            68999999999999999999999999999864      222222233333322222  3899999999999998887643


Q ss_pred             HHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCC
Q 022357           81 KTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDS  160 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~  160 (298)
                           .+++++|.|+.....                           ...+...+.+++|+.|+.++++++..    .+.
T Consensus        81 -----~~~~i~h~Aa~~~~~---------------------------~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~v  124 (346)
T d1ek6a_          81 -----SFMAVIHFAGLKAVG---------------------------ESVQKPLDYYRVNLTGTIQLLEIMKA----HGV  124 (346)
T ss_dssp             -----CEEEEEECCSCCCHH---------------------------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTC
T ss_pred             -----ccccccccccccCcH---------------------------hhHhCHHHHHHhhhcccccccchhhh----cCc
Confidence                 788999999976432                           23344567799999999999988754    344


Q ss_pred             CcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHh
Q 022357          161 PRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKR  240 (298)
Q Consensus       161 g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e  240 (298)
                      .+++++||............                              ............|+.+|...+..++.++..
T Consensus       125 ~~~i~~ss~~~~~~~~~~~~------------------------------~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~  174 (346)
T d1ek6a_         125 KNLVFSSSATVYGNPQYLPL------------------------------DEAHPTGGCTNPYGKSKFFIEEMIRDLCQA  174 (346)
T ss_dssp             CEEEEEEEGGGGCSCSSSSB------------------------------CTTSCCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccceeeeccccccc------------------------------cccccccccCChHHHHHHHHHHHHHHHHHh
Confidence            68999988766543211000                              001111234568999999999999998887


Q ss_pred             CCCcEEEEeeCCeeecC
Q 022357          241 YPKFCVNCVCPGFVKTD  257 (298)
Q Consensus       241 ~~~i~vn~v~PG~v~t~  257 (298)
                      ..+.....+.|+.+..+
T Consensus       175 ~~~~~~~~lR~~~v~G~  191 (346)
T d1ek6a_         175 DKTWNAVLLRYFNPTGA  191 (346)
T ss_dssp             CTTCEEEEEEECEEECC
T ss_pred             ccCCceEEEeecceecc
Confidence            77888888888777664

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.68  E-value=1.4e-16  Score=144.31  Aligned_cols=195  Identities=16%  Similarity=0.093  Sum_probs=131.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +||||||+|.||++++++|++.|++|++..++...... ...+... .....+.++.+|++|.+.+.++++..     .+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~-~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDI-SESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC-GGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc-HHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhC-----CC
Confidence            58999999999999999999999986554433211000 0111111 11124889999999999999888755     79


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccC-----CCCc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELS-----DSPR  162 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~g~  162 (298)
                      |+|||+|+.....                           ...++..+.+++|+.|+.++++++...-...     +..+
T Consensus        75 d~VihlAa~~~~~---------------------------~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~  127 (361)
T d1kewa_          75 DAVMHLAAESHVD---------------------------RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFR  127 (361)
T ss_dssp             SEEEECCSCCCHH---------------------------HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCE
T ss_pred             CEEEECccccchh---------------------------hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceE
Confidence            9999999875322                           2334556789999999999999987654321     2358


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhh-hhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEG-EIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      +|++||.............     .                 ..... ...+..+....+.|+.||.+.+.+++.++..+
T Consensus       128 ~i~~SS~~vyg~~~~~~~~-----~-----------------~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~  185 (361)
T d1kewa_         128 FHHISTDEVYGDLPHPDEV-----E-----------------NSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY  185 (361)
T ss_dssp             EEEEEEGGGGCCCCCGGGS-----C-----------------TTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeccceeeCCCccCCcc-----c-----------------cccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999997755332110000     0                 00000 00112223446789999999999999999886


Q ss_pred             CCcEEEEeeCCeeecCCC
Q 022357          242 PKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~~  259 (298)
                       ++.+.++.|+.|..|..
T Consensus       186 -~i~~~~lR~~~vyGp~~  202 (361)
T d1kewa_         186 -GLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             -CCCEEEEEECEEESTTC
T ss_pred             -CCCEEEEecCceECcCC
Confidence             88889999998888643

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.67  E-value=1.2e-15  Score=136.68  Aligned_cols=184  Identities=17%  Similarity=0.080  Sum_probs=131.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCC--CCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGV--DPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +.|++|||||||.||++++++|.++|++|++++|....-......+.....  ....+.++.+|+.|.........    
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----   90 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA----   90 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc----
Confidence            458999999999999999999999999999998743322222222221110  01128899999999887655543    


Q ss_pred             hcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCc
Q 022357           83 QFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPR  162 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~  162 (298)
                         ..+.++|.++.....                           ...+.....+++|+.|+.++++++..    .+..+
T Consensus        91 ---~~~~v~~~~a~~~~~---------------------------~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~~  136 (341)
T d1sb8a_          91 ---GVDYVLHQAALGSVP---------------------------RSINDPITSNATNIDGFLNMLIAARD----AKVQS  136 (341)
T ss_dssp             ---TCSEEEECCSCCCHH---------------------------HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSE
T ss_pred             ---ccccccccccccccc---------------------------ccccCccchhheeehhHHHHHHHHHh----cCCce
Confidence               678888888765321                           24566667899999999999998865    24469


Q ss_pred             EEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          163 LVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       163 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      +|++||.......                               .+....+..+....+.|+.||.+.+.+++.++..+ 
T Consensus       137 ~i~~SS~~vyg~~-------------------------------~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-  184 (341)
T d1sb8a_         137 FTYAASSSTYGDH-------------------------------PGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY-  184 (341)
T ss_dssp             EEEEEEGGGGTTC-------------------------------CCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH-
T ss_pred             EEEcccceeeCCC-------------------------------CCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHh-
Confidence            9999997755321                               01112333444557899999999999999998775 


Q ss_pred             CcEEEEeeCCeeecCC
Q 022357          243 KFCVNCVCPGFVKTDI  258 (298)
Q Consensus       243 ~i~vn~v~PG~v~t~~  258 (298)
                      ++++..+.|+.|.++.
T Consensus       185 ~i~~~ilR~~~v~G~~  200 (341)
T d1sb8a_         185 GFSTIGLRYFNVFGRR  200 (341)
T ss_dssp             CCCCEEEEECCEECTT
T ss_pred             CCCeEEEEeceeeccC
Confidence            7888888888777653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.67  E-value=5.3e-16  Score=137.39  Aligned_cols=181  Identities=16%  Similarity=0.062  Sum_probs=128.1

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhh-HHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG-LEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      |+||||||||.||++++++|+++|++|+.++|..... ...++.+.   . ..++.++.+|++|.+.+.+++...     
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~---~-~~~~~~~~~Dl~d~~~~~~~~~~~-----   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG---I-EGDIQYEDGDMADACSVQRAVIKA-----   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT---C-GGGEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc---c-cCCcEEEEccccChHHhhhhhccc-----
Confidence            6899999999999999999999999999999875431 12222222   1 123899999999999988887765     


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ..++++|+|+.....                           ...+...+.+.+|+.|+.++++++...   ....++++
T Consensus        72 ~~~~~~~~a~~~~~~---------------------------~~~~~~~~~~~~n~~g~~~~l~~~~~~---~~~~~~i~  121 (321)
T d1rpna_          72 QPQEVYNLAAQSFVG---------------------------ASWNQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQ  121 (321)
T ss_dssp             CCSEEEECCSCCCHH---------------------------HHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEE
T ss_pred             ccccccccccccccc---------------------------ccccchHHHHhhhhhchHHHHHHHHHh---CCCccccc
Confidence            678888888765432                           133445677899999999999988653   22235666


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcE
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC  245 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~  245 (298)
                      .||.. ..+...                              .....+..+......|+.+|.+.+.+++.++..+ ++.
T Consensus       122 ~Ss~~-~~~~~~------------------------------~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~  169 (321)
T d1rpna_         122 ASTSE-MFGLIQ------------------------------AERQDENTPFYPRSPYGVAKLYGHWITVNYRESF-GLH  169 (321)
T ss_dssp             EEEGG-GGCSCS------------------------------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCC
T ss_pred             ccchh-hcCccc------------------------------CCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc-CCc
Confidence            66644 322211                              0111233444557889999999999999998885 677


Q ss_pred             EEEeeCCeeecCC
Q 022357          246 VNCVCPGFVKTDI  258 (298)
Q Consensus       246 vn~v~PG~v~t~~  258 (298)
                      +..+.|+.+..|.
T Consensus       170 ~~~lr~~~vyGp~  182 (321)
T d1rpna_         170 ASSGILFNHESPL  182 (321)
T ss_dssp             EEEEEECCEECTT
T ss_pred             EEEEEEecccCCC
Confidence            7777777666653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=3.6e-15  Score=124.30  Aligned_cols=180  Identities=15%  Similarity=0.101  Sum_probs=123.8

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .|+++||||||+||++++++|+++|++|.++.|++.++...       .  ...+.++.+|+++.+++.++++       
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-------~--~~~~~~~~gD~~d~~~l~~al~-------   66 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------G--PRPAHVVVGDVLQAADVDKTVA-------   66 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------S--CCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-------c--ccccccccccccchhhHHHHhc-------
Confidence            37899999999999999999999999999999998764321       1  1238899999999999887765       


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ..|+||+++|.......                                  .+++..++.+++++    +++++..++|+
T Consensus        67 ~~d~vi~~~g~~~~~~~----------------------------------~~~~~~~~~~l~~a----a~~~~v~r~i~  108 (205)
T d1hdoa_          67 GQDAVIVLLGTRNDLSP----------------------------------TTVMSEGARNIVAA----MKAHGVDKVVA  108 (205)
T ss_dssp             TCSEEEECCCCTTCCSC----------------------------------CCHHHHHHHHHHHH----HHHHTCCEEEE
T ss_pred             CCCEEEEEeccCCchhh----------------------------------hhhhHHHHHHHHHH----HHhcCCCeEEE
Confidence            68999999987532200                                  12233344444444    44455679999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcE
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC  245 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~  245 (298)
                      +||.......                                      ...++....|...|.+.+.+.+    + .+++
T Consensus       109 ~ss~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~e~~l~----~-~~~~  145 (205)
T d1hdoa_         109 CTSAFLLWDP--------------------------------------TKVPPRLQAVTDDHIRMHKVLR----E-SGLK  145 (205)
T ss_dssp             ECCGGGTSCT--------------------------------------TCSCGGGHHHHHHHHHHHHHHH----H-TCSE
T ss_pred             EeeeeccCCC--------------------------------------ccccccccccchHHHHHHHHHH----h-cCCc
Confidence            9986543221                                      1112333456666766665443    1 5889


Q ss_pred             EEEeeCCeeecCCCC-----------CCCCCChhhhhhhhhhhhccCC
Q 022357          246 VNCVCPGFVKTDINF-----------HAGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       246 vn~v~PG~v~t~~~~-----------~~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      ...|.||.+......           ...+.+.++.|+..+..+..++
T Consensus       146 ~tiirp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~  193 (205)
T d1hdoa_         146 YVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDE  193 (205)
T ss_dssp             EEEECCSEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCST
T ss_pred             eEEEecceecCCCCcccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCC
Confidence            999999988543211           1234688999999999888765

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.65  E-value=1.7e-15  Score=135.95  Aligned_cols=186  Identities=19%  Similarity=0.042  Sum_probs=133.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .++|+||||||||.||++++++|+++|++|++++|+..+...........    ..+.++.+|++|.+.+.++++..   
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~----~~i~~~~~Dl~d~~~l~~~~~~~---   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVA----DGMQSEIGDIRDQNKLLESIREF---   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTT----TTSEEEECCTTCHHHHHHHHHHH---
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcc----cCCeEEEeeccChHhhhhhhhhc---
Confidence            47899999999999999999999999999999999877554443332211    12889999999999998888765   


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                        .+|+++|.|+.....                           ...+.....+.+|+.|+..+++++...-   ....+
T Consensus        79 --~~~~v~~~aa~~~~~---------------------------~~~~~~~~~~~~Nv~g~~n~l~~~~~~~---~~~~~  126 (356)
T d1rkxa_          79 --QPEIVFHMAAQPLVR---------------------------LSYSEPVETYSTNVMGTVYLLEAIRHVG---GVKAV  126 (356)
T ss_dssp             --CCSEEEECCSCCCHH---------------------------HHHHCHHHHHHHHTHHHHHHHHHHHHHC---CCCEE
T ss_pred             --hhhhhhhhhcccccc---------------------------ccccCCccccccccccchhhhhhhhccc---ccccc
Confidence              789999999875432                           2445566789999999999999887632   22345


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC--
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY--  241 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~--  241 (298)
                      ++.||....... ..                             .....+..+......|+.+|.+.+.+++.++.++  
T Consensus       127 ~~~s~~~~~~~~-~~-----------------------------~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~  176 (356)
T d1rkxa_         127 VNITSDKCYDNK-EW-----------------------------IWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFN  176 (356)
T ss_dssp             EEECCGGGBCCC-CS-----------------------------SSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             cccccccccccc-cc-----------------------------ccccccccccCCCCccccccccchhhhhHHhhhccc
Confidence            555544333221 00                             0001112223346789999999999999888765  


Q ss_pred             ------CCcEEEEeeCCeeecCC
Q 022357          242 ------PKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       242 ------~~i~vn~v~PG~v~t~~  258 (298)
                            .++.+..+.|+-+..|.
T Consensus       177 ~~~~~~~~~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         177 PANYGQHGTAVATVRAGNVIGGG  199 (356)
T ss_dssp             GGGHHHHCCEEEEEECCCEECTT
T ss_pred             chhccccCceEEeccCCCeeCCC
Confidence                  25778888888777653

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.63  E-value=1.2e-15  Score=136.97  Aligned_cols=191  Identities=18%  Similarity=0.066  Sum_probs=126.1

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      |+||||||||.||++++.+|+++|+.|.+++++.-.-......+....  ...+.++.+|++|.+.+..++.       .
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~--~~~i~~~~~Di~d~~~~~~~~~-------~   73 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL--GDRVELVVGDIADAELVDKLAA-------K   73 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC--SSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhh--cCCeEEEEccCCCHHHHHHHHh-------h
Confidence            679999999999999999999999986666553210000000111111  1238899999999999888764       6


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      .+.++|.|+.....                           ....+..+.+++|+.|+.+++.++...     +.++|++
T Consensus        74 ~~~v~~~a~~~~~~---------------------------~~~~~~~~~~~~N~~g~~nll~~~~~~-----~~k~i~~  121 (346)
T d1oc2a_          74 ADAIVHYAAESHND---------------------------NSLNDPSPFIHTNFIGTYTLLEAARKY-----DIRFHHV  121 (346)
T ss_dssp             CSEEEECCSCCCHH---------------------------HHHHCCHHHHHHHTHHHHHHHHHHHHH-----TCEEEEE
T ss_pred             hhhhhhhhhccccc---------------------------chhhCcccceeeehHhHHhhhhhhccc-----ccccccc
Confidence            78899999876432                           233445677899999999999888653     2477887


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      ||.......+... ......                  ......+.+.......+.|+.+|.+.+.+++.++.++ ++++
T Consensus       122 ss~~vyg~~~~~~-~~~~~~------------------~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~-~i~~  181 (346)
T d1oc2a_         122 STDEVYGDLPLRE-DLPGHG------------------EGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF-GVKA  181 (346)
T ss_dssp             EEGGGGCCBCCGG-GSTTTT------------------CSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEE
T ss_pred             ccceEecccCccc-cccccc------------------cCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCE
Confidence            7765432211000 000000                  0001112222333446789999999999999998875 9999


Q ss_pred             EEeeCCeeecCC
Q 022357          247 NCVCPGFVKTDI  258 (298)
Q Consensus       247 n~v~PG~v~t~~  258 (298)
                      .++.|+.|..|.
T Consensus       182 ~ilR~~~vyGp~  193 (346)
T d1oc2a_         182 TISNCSNNYGPY  193 (346)
T ss_dssp             EEEEECCEESTT
T ss_pred             EEEeecceeCCC
Confidence            999999998864

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=2.8e-15  Score=132.40  Aligned_cols=169  Identities=16%  Similarity=0.133  Sum_probs=122.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .|+||||||||.||++++++|+++|+.|+++.+..                       .+|+.+.+.+..+++.-     
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-----------------------~~~~~~~~~~~~~~~~~-----   53 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASE-----   53 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-----------------------hccccCHHHHHHHHhhc-----
Confidence            57899999999999999999999999988765432                       25899999988877533     


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      .+|.++|+|+.....                          ........+.+.+|+.|+.++++++...    +..++|+
T Consensus        54 ~~d~v~~~a~~~~~~--------------------------~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~v~~~i~  103 (315)
T d1e6ua_          54 RIDQVYLAAAKVGGI--------------------------VANNTYPADFIYQNMMIESNIIHAAHQN----DVNKLLF  103 (315)
T ss_dssp             CCSEEEECCCCCCCH--------------------------HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEE
T ss_pred             CCCEEEEcchhcccc--------------------------ccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCEEEE
Confidence            789999999765321                          0123344556889999999999988653    3458999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcE
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC  245 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~  245 (298)
                      +||.....+..+..                          ..++...+..+.+....|+.||.+.+.+++.++.++ +++
T Consensus       104 ~SS~~vyg~~~~~~--------------------------~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gl~  156 (315)
T d1e6ua_         104 LGSSCIYPKLAKQP--------------------------MAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY-GRD  156 (315)
T ss_dssp             ECCGGGSCTTCCSS--------------------------BCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH-CCE
T ss_pred             ECCceEcCCCCCCC--------------------------ccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCC
Confidence            99977654321100                          000111111222335679999999999999998886 899


Q ss_pred             EEEeeCCeeecCCC
Q 022357          246 VNCVCPGFVKTDIN  259 (298)
Q Consensus       246 vn~v~PG~v~t~~~  259 (298)
                      +..+.|+.|..|..
T Consensus       157 ~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         157 YRSVMPTNLYGPHD  170 (315)
T ss_dssp             EEEEEECEEESTTC
T ss_pred             EEEEeeccEECCCC
Confidence            99999999988754

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.61  E-value=1.7e-14  Score=127.77  Aligned_cols=181  Identities=18%  Similarity=0.126  Sum_probs=118.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch-hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEK-RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      +||||||+|.||++++++|+++|++|+++++-.. ........+....    ++.++.+|+++.+++.++++..     +
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~----~~~~i~~Di~~~~~l~~~~~~~-----~   72 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG----NFEFVHGDIRNKNDVTRLITKY-----M   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTC----CCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccC----CcEEEEcccCCHHHHHHHHHhc-----C
Confidence            5899999999999999999999999999875322 2233334444332    2889999999999999888765     7


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+|||+|+.....                           ...++..+.+++|+.|+.++++++...    +..+.++.
T Consensus        73 ~d~Vih~aa~~~~~---------------------------~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~i~~  121 (338)
T d1orra_          73 PDSCFHLAGQVAMT---------------------------TSIDNPCMDFEINVGGTLNLLEAVRQY----NSNCNIIY  121 (338)
T ss_dssp             CSEEEECCCCCCHH---------------------------HHHHCHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEE
T ss_pred             CceEEeeccccccc---------------------------ccccChHHHHHHHHHHHHHHHHhhhcc----cccccccc
Confidence            89999999876432                           234455678999999999999987653    33456666


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCC
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYP  242 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~  242 (298)
                      ||.....+......   ........           ....................|+.+|...+.+....+..+.
T Consensus       122 sS~~~~~~~~~~~~---~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~  183 (338)
T d1orra_         122 SSTNKVYGDLEQYK---YNETETRY-----------TCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG  183 (338)
T ss_dssp             EEEGGGGTTCTTSC---EEECSSCE-----------EETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cccccccccccccc---cccccccc-----------cccccccCcccCCccccccccccccchhhhhhhhhhhccC
Confidence            66554433211000   00000000           0000000011123334568899999999999988888863

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.60  E-value=4.3e-15  Score=133.98  Aligned_cols=183  Identities=13%  Similarity=-0.027  Sum_probs=128.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++++||||||+|.||++++.+|+++|++|+++++......         ........+..+|+.+.+++.++++      
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~------   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM---------TEDMFCDEFHLVDLRVMENCLKVTE------   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS---------CGGGTCSEEEECCTTSHHHHHHHHT------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch---------hhhcccCcEEEeechhHHHHHHHhh------
Confidence            5778999999999999999999999999999987543210         0001125677889998887766553      


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       .+|.+||.|+......                          ...+.....+.+|+.++.+++.++...    +..++|
T Consensus        79 -~~d~Vih~a~~~~~~~--------------------------~~~~~~~~~~~~n~~gt~~ll~~~~~~----~vk~~i  127 (363)
T d2c5aa1          79 -GVDHVFNLAADMGGMG--------------------------FIQSNHSVIMYNNTMISFNMIEAARIN----GIKRFF  127 (363)
T ss_dssp             -TCSEEEECCCCCCCHH--------------------------HHTTCHHHHHHHHHHHHHHHHHHHHHT----TCSEEE
T ss_pred             -cCCeEeeccccccccc--------------------------ccccccccccccccchhhHHHHhHHhh----Cccccc
Confidence             6899999998764321                          223445577889999999999988653    446899


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCc
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF  244 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i  244 (298)
                      ++||...........    ..                    .......+..+......|+.||.+.+.+++.+..++ ++
T Consensus       128 ~~SS~~~~~~~~~~~----~~--------------------~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~-gl  182 (363)
T d2c5aa1         128 YASSACIYPEFKQLE----TT--------------------NVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF-GI  182 (363)
T ss_dssp             EEEEGGGSCGGGSSS----SS--------------------SCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH-CC
T ss_pred             ccccccccccccccc----cc--------------------ccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh-CC
Confidence            999976553210000    00                    000001112222346789999999999999998886 88


Q ss_pred             EEEEeeCCeeecCC
Q 022357          245 CVNCVCPGFVKTDI  258 (298)
Q Consensus       245 ~vn~v~PG~v~t~~  258 (298)
                      .+..+.|+.+..+.
T Consensus       183 ~~~ilR~~~vyG~~  196 (363)
T d2c5aa1         183 ECRIGRFHNIYGPF  196 (363)
T ss_dssp             EEEEEEECCEECTT
T ss_pred             CEEEEEeeeEeccC
Confidence            99999998888764

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.6e-15  Score=134.56  Aligned_cols=178  Identities=17%  Similarity=0.056  Sum_probs=117.0

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .|+||||||+|.||++++.+|+++|++|++++|............    .....+.....|+.     +.+       +.
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~----~~~~~~d~~~~~~~-----~~~-------~~   64 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW----IGHENFELINHDVV-----EPL-------YI   64 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG----TTCTTEEEEECCTT-----SCC-------CC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh----cCCCceEEEehHHH-----HHH-------Hc
Confidence            478999999999999999999999999999986432111111111    11111333333332     222       23


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      ++|+|||+|+.....                           ...++..+.+++|+.|+.++++++...    + .++|+
T Consensus        65 ~~d~VihlAa~~~~~---------------------------~~~~~~~~~~~~Nv~g~~~ll~~~~~~----~-~k~I~  112 (312)
T d2b69a1          65 EVDQIYHLASPASPP---------------------------NYMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLL  112 (312)
T ss_dssp             CCSEEEECCSCCSHH---------------------------HHTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEE
T ss_pred             CCCEEEECcccCCch---------------------------hHHhCHHHHHHHHHHHHHHHHHHHHHc----C-CcEEE
Confidence            699999999875421                           122344567899999999999987542    2 48999


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcE
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC  245 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~  245 (298)
                      +||..........                          ...++...+..+......|+.||.+.+.+++.++..+ ++.
T Consensus       113 ~SS~~vy~~~~~~--------------------------~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~  165 (312)
T d2b69a1         113 ASTSEVYGDPEVH--------------------------PQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE-GVE  165 (312)
T ss_dssp             EEEGGGGBSCSSS--------------------------SBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH-CCC
T ss_pred             EEChheecCCCCC--------------------------CCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHh-CCc
Confidence            9996544321000                          0000111122233446789999999999999999886 899


Q ss_pred             EEEeeCCeeecCC
Q 022357          246 VNCVCPGFVKTDI  258 (298)
Q Consensus       246 vn~v~PG~v~t~~  258 (298)
                      +..+.|+.|..|.
T Consensus       166 ~~~lR~~~vyGp~  178 (312)
T d2b69a1         166 VRVARIFNTFGPR  178 (312)
T ss_dssp             EEEEEECCEECTT
T ss_pred             EEEEEeeeEECCC
Confidence            9999999998764

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=3.5e-15  Score=133.41  Aligned_cols=212  Identities=11%  Similarity=0.008  Sum_probs=139.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      +||||||||.||++++++|+++|+ +|+++++..........        ..++.++++|+++.+++.+.+.   .   .
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~--------~~~~~~i~~Di~~~~~~~~~~~---~---~   67 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--------HPHFHFVEGDISIHSEWIEYHV---K---K   67 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT--------CTTEEEEECCTTTCSHHHHHHH---H---H
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc--------CCCeEEEECccCChHHHHHHHH---h---C
Confidence            599999999999999999999995 89998876543222211        1238999999998876555322   1   5


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+|||+|+.....                           ...+...+.+.+|+.|+.++++++...     +.+.+++
T Consensus        68 ~d~Vih~a~~~~~~---------------------------~~~~~~~~~~~~nv~gt~~ll~~~~~~-----~~~~~~~  115 (342)
T d2blla1          68 CDVVLPLVAIATPI---------------------------EYTRNPLRVFELDFEENLRIIRYCVKY-----RKRIIFP  115 (342)
T ss_dssp             CSEEEECBCCCCHH---------------------------HHHHSHHHHHHHHTHHHHHHHHHHHHT-----TCEEEEE
T ss_pred             CCcccccccccccc---------------------------ccccCCccccccccccccccccccccc-----ccccccc
Confidence            89999999976432                           133444567999999999999998552     2466777


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      ||.............     .                   ................|+.||.+.+.+++.++..+ ++.+
T Consensus       116 ss~~~~~~~~~~~~~-----~-------------------~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~  170 (342)
T d2blla1         116 STSEVYGMCSDKYFD-----E-------------------DHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-GLQF  170 (342)
T ss_dssp             CCGGGGBTCCCSSBC-----T-------------------TTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH-CCCE
T ss_pred             ccccccccccccccc-----c-------------------ccccccccccCCCcchhhhcccchhhhhhhhhccc-Ccee
Confidence            776654332110000     0                   00000111112335789999999999999998886 7888


Q ss_pred             EEeeCCeeecCCCCCC----------------------------------CCCChhhhhhhhhhhhccCCCCCcceEe
Q 022357          247 NCVCPGFVKTDINFHA----------------------------------GILSVEEGAESPVKLALLPDGGPTGRFF  290 (298)
Q Consensus       247 n~v~PG~v~t~~~~~~----------------------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~  290 (298)
                      ..+.|..+..+.....                                  .+...++.++....++..+.....+..|
T Consensus       171 ~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~  248 (342)
T d2blla1         171 TLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEII  248 (342)
T ss_dssp             EEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEE
T ss_pred             EEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhccccCCCeEE
Confidence            8877777766532110                                  1346777777777777665544444444

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.58  E-value=3.4e-14  Score=129.07  Aligned_cols=194  Identities=15%  Similarity=0.095  Sum_probs=132.8

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHH-CCCEEEEEec---------CchhhHHHHHHHHhc-----CCCCcceeEEEeccCcH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLAS-KGITVVLTAR---------DEKRGLEAVEKLKAS-----GVDPELLLFHQLDISDL   70 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~-~G~~Vii~~r---------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~Dls~~   70 (298)
                      +++||||||+|.||++++++|++ .|++|+++++         ..+..+.....++..     ......+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            35799999999999999999986 6999999874         112233333444432     11223478899999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHH
Q 022357           71 ASVSSLADFIKTQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEA  150 (298)
Q Consensus        71 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~  150 (298)
                      +.++++++.    ..++|+|+|.|+.....                           ...+.....+++|+.++..++++
T Consensus        82 ~~l~~~~~~----~~~~d~ViH~Aa~~~~~---------------------------~~~~~~~~~~~~N~~~t~~~l~~  130 (383)
T d1gy8a_          82 DFLNGVFTR----HGPIDAVVHMCAFLAVG---------------------------ESVRDPLKYYDNNVVGILRLLQA  130 (383)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH---------------------------HHHHCHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhhhhhc----cceeehhhccccccccc---------------------------ccccccccccccccccccccchh
Confidence            998887754    35789999999976432                           23344456788999999999988


Q ss_pred             HhhhhccCCCCcEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHH
Q 022357          151 LIPLLELSDSPRLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVI  230 (298)
Q Consensus       151 ~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al  230 (298)
                      +...    +..++++++|............                        ........+.........|+.+|.+.
T Consensus       131 ~~~~----~~~~~~~~~s~~~~~~~~~~~~------------------------~~~~~~~~e~~~~~p~~~Y~~sK~~~  182 (383)
T d1gy8a_         131 MLLH----KCDKIIFSSSAAIFGNPTMGSV------------------------STNAEPIDINAKKSPESPYGESKLIA  182 (383)
T ss_dssp             HHHT----TCCEEEEEEEGGGTBSCCC-----------------------------CCCCBCTTSCCBCSSHHHHHHHHH
T ss_pred             hhcc----CCcccccccccccccccccccc------------------------cccccccccccCCCCCCHHHhhHhHH
Confidence            8753    3457777777554432211000                        00001122233334578899999999


Q ss_pred             HHHHHHHHHhCCCcEEEEeeCCeeecCCC
Q 022357          231 NAYTRILAKRYPKFCVNCVCPGFVKTDIN  259 (298)
Q Consensus       231 ~~l~~~la~e~~~i~vn~v~PG~v~t~~~  259 (298)
                      +.+++.+...+ ++.+.++.|+.+..+..
T Consensus       183 e~~~~~~~~~~-gl~~~~lR~~~vyG~~~  210 (383)
T d1gy8a_         183 ERMIRDCAEAY-GIKGICLRYFNACGAHE  210 (383)
T ss_dssp             HHHHHHHHHHH-CCEEEEEEECEEECCCT
T ss_pred             HHHHHHHHHHh-CCCEEEEecceeeccCc
Confidence            99999988875 88888899888877643

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.56  E-value=2e-14  Score=127.54  Aligned_cols=178  Identities=21%  Similarity=0.118  Sum_probs=125.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEE------EecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVL------TARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii------~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +||||||+|.||++++++|+++|+.|..      .++.......  ..+... .....+.++..|+++........    
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~----   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPV-DADPRLRFVHGDIRDAGLLAREL----   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGG-TTCTTEEEEECCTTCHHHHHHHT----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhhh-hcCCCeEEEEeccccchhhhccc----
Confidence            5999999999999999999999986543      3322111000  011111 11123889999999998766543    


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                         ..+|.++|.|+.....                           .......+.+++|+.++.++++++..    .+..
T Consensus        75 ---~~~d~vi~~a~~~~~~---------------------------~~~~~~~~~~~~N~~gt~~ll~~~~~----~~~~  120 (322)
T d1r6da_          75 ---RGVDAIVHFAAESHVD---------------------------RSIAGASVFTETNVQGTQTLLQCAVD----AGVG  120 (322)
T ss_dssp             ---TTCCEEEECCSCCCHH---------------------------HHHHCCHHHHHHHTHHHHHHHHHHHH----TTCC
T ss_pred             ---cccceEEeeccccccc---------------------------ccccchHHHhhhhHHHHHHHHHHHHH----cCCc
Confidence               3789999999875432                           34455567789999999999998865    3446


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      ++|++||.......                               ..+.+.+..+....+.|+.||.+.+.+++.++.++
T Consensus       121 ~~I~~Ss~~~yg~~-------------------------------~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~  169 (322)
T d1r6da_         121 RVVHVSTNQVYGSI-------------------------------DSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY  169 (322)
T ss_dssp             EEEEEEEGGGGCCC-------------------------------SSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEeecceeecCC-------------------------------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            89999997655332                               11122333444556889999999999999999886


Q ss_pred             CCcEEEEeeCCeeecCC
Q 022357          242 PKFCVNCVCPGFVKTDI  258 (298)
Q Consensus       242 ~~i~vn~v~PG~v~t~~  258 (298)
                       ++.+..+.|+.|..|.
T Consensus       170 -~~~~~~lR~~~vyGp~  185 (322)
T d1r6da_         170 -GLDVRITRCCNNYGPY  185 (322)
T ss_dssp             -CCCEEEEEECEEECTT
T ss_pred             -CCCEEEEEeeeEECcC
Confidence             8999999999988764

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.7e-13  Score=116.21  Aligned_cols=180  Identities=16%  Similarity=0.090  Sum_probs=126.0

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +++|+||||||||.||++++++|+++|.  +|++++|++......         ....+....+|+.+.+++.+.+    
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~---------~~~~i~~~~~D~~~~~~~~~~~----   78 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE---------AYKNVNQEVVDFEKLDDYASAF----   78 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG---------GGGGCEEEECCGGGGGGGGGGG----
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc---------ccceeeeeeecccccccccccc----
Confidence            3568999999999999999999999995  899999986532210         0112666778888776655444    


Q ss_pred             HhcCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCC
Q 022357           82 TQFGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSP  161 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g  161 (298)
                         ..+|++||++|...                              ......+...+|+.++..+++++..    .+-.
T Consensus        79 ---~~~d~vi~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~  121 (232)
T d2bkaa1          79 ---QGHDVGFCCLGTTR------------------------------GKAGAEGFVRVDRDYVLKSAELAKA----GGCK  121 (232)
T ss_dssp             ---SSCSEEEECCCCCH------------------------------HHHHHHHHHHHHTHHHHHHHHHHHH----TTCC
T ss_pred             ---cccccccccccccc------------------------------cccchhhhhhhcccccceeeecccc----cCcc
Confidence               36899999998652                              2223345677899999888888754    3456


Q ss_pred             cEEEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhC
Q 022357          162 RLVNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRY  241 (298)
Q Consensus       162 ~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~  241 (298)
                      ++|++||.....                                            .....|+.+|...+...+.    .
T Consensus       122 ~fi~~Ss~~~~~--------------------------------------------~~~~~Y~~~K~~~E~~l~~----~  153 (232)
T d2bkaa1         122 HFNLLSSKGADK--------------------------------------------SSNFLYLQVKGEVEAKVEE----L  153 (232)
T ss_dssp             EEEEECCTTCCT--------------------------------------------TCSSHHHHHHHHHHHHHHT----T
T ss_pred             ccccCCcccccc--------------------------------------------CccchhHHHHHHhhhcccc----c
Confidence            899999965432                                            2246799999988865543    2


Q ss_pred             CCc-EEEEeeCCeeecCCCCCC--------------------CCCChhhhhhhhhhhhccCC
Q 022357          242 PKF-CVNCVCPGFVKTDINFHA--------------------GILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       242 ~~i-~vn~v~PG~v~t~~~~~~--------------------~~~~~~~~a~~~~~~~~~~~  282 (298)
                       +. ++..+.||.+..+.....                    .....++.|+.++..+..+.
T Consensus       154 -~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~  214 (232)
T d2bkaa1         154 -KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  214 (232)
T ss_dssp             -CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             -cccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCc
Confidence             33 567789999987643210                    12355788888777776554

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.45  E-value=4.4e-13  Score=112.26  Aligned_cols=199  Identities=14%  Similarity=-0.010  Sum_probs=124.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCE--EEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGIT--VVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~--Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++||||||||+||++++++|+++|+.  |+.+.|++++...       ...   .+.++.+|+++.+++.++++      
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-------~~~---~~~~~~~d~~~~~~~~~~~~------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-------IGG---EADVFIGDITDADSINPAFQ------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-------TTC---CTTEEECCTTSHHHHHHHHT------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-------ccC---CcEEEEeeeccccccccccc------
Confidence            79999999999999999999999975  5556787654322       111   27899999999998877764      


Q ss_pred             CCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEE
Q 022357           85 GKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLV  164 (298)
Q Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv  164 (298)
                       .+|.+||+|+..............              ...............+|+.++..++.......    .+...
T Consensus        68 -~~d~vi~~a~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  128 (252)
T d2q46a1          68 -GIDALVILTSAVPKMKPGFDPTKG--------------GRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG----VKHIV  128 (252)
T ss_dssp             -TCSEEEECCCCCCEECTTCCTTSC--------------CCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT----CSEEE
T ss_pred             -cceeeEEEEeeccccccccchhhh--------------hhcccccccchhhhccccccceeecccccccc----ccccc
Confidence             689999999876543211100000              00011222334556778888888877765543    46777


Q ss_pred             EEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCc
Q 022357          165 NLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKF  244 (298)
Q Consensus       165 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i  244 (298)
                      +.++.....+..+..                                     ......|...+.+    ...+..+ .++
T Consensus       129 ~~s~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~----~~~~~~~-~~~  166 (252)
T d2q46a1         129 VVGSMGGTNPDHPLN-------------------------------------KLGNGNILVWKRK----AEQYLAD-SGT  166 (252)
T ss_dssp             EEEETTTTCTTCGGG-------------------------------------GGGGCCHHHHHHH----HHHHHHH-SSS
T ss_pred             cccccccCCCCcccc-------------------------------------cccccchhhhhhh----hhhhhhc-ccc
Confidence            777755443221100                                     0111223333332    2223333 689


Q ss_pred             EEEEeeCCeeecCCCCC---------------CCCCChhhhhhhhhhhhccCC
Q 022357          245 CVNCVCPGFVKTDINFH---------------AGILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       245 ~vn~v~PG~v~t~~~~~---------------~~~~~~~~~a~~~~~~~~~~~  282 (298)
                      ++..+.||.+..+....               .++.+.++.|+..+..+..++
T Consensus       167 ~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~  219 (252)
T d2q46a1         167 PYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEE  219 (252)
T ss_dssp             CEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGG
T ss_pred             cceeecceEEECCCcchhhhhhccCcccccCCCCeEEHHHHHHHHHHHhCCcc
Confidence            99999999997764321               234577888998888877654

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.32  E-value=2.1e-12  Score=111.94  Aligned_cols=141  Identities=15%  Similarity=0.077  Sum_probs=98.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +||||||+|.||++++++|.++|+.|. ++++...                    +..|+++.+.++++++..     ++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~-~~~~~~~--------------------~~~Dl~~~~~~~~~i~~~-----~~   55 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIA-LDVHSKE--------------------FCGDFSNPKGVAETVRKL-----RP   55 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEE-ECTTCSS--------------------SCCCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEE-EECCCcc--------------------ccCcCCCHHHHHHHHHHc-----CC
Confidence            599999999999999999999887554 4443211                    347999999999888765     78


Q ss_pred             cEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEEc
Q 022357           88 DILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNLS  167 (298)
Q Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~vs  167 (298)
                      |+|||+||.....                           ...+.....+.+|+.++..++.++..     .+.+++++|
T Consensus        56 D~Vih~Aa~~~~~---------------------------~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~~~s  103 (298)
T d1n2sa_          56 DVIVNAAAHTAVD---------------------------KAESEPELAQLLNATSVEAIAKAANE-----TGAWVVHYS  103 (298)
T ss_dssp             SEEEECCCCCCHH---------------------------HHTTCHHHHHHHHTHHHHHHHHHHTT-----TTCEEEEEE
T ss_pred             CEEEEeccccccc---------------------------ccccCccccccccccccccchhhhhc-----ccccccccc
Confidence            9999999976432                           12233346688999999999888754     235777777


Q ss_pred             cCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHH
Q 022357          168 SYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRIL  237 (298)
Q Consensus       168 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~l  237 (298)
                      |.......                               .+....+...+.....|+.+|.+.+.+.+..
T Consensus       104 s~~~~~~~-------------------------------~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_         104 TDYVFPGT-------------------------------GDIPWQETDATSPLNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             EGGGSCCC-------------------------------TTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccCC-------------------------------CCCCCccccccCCCchHhhhhhhhhhhHHhh
Confidence            76543221                               1111233344455688999999888766543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.28  E-value=3.2e-11  Score=103.70  Aligned_cols=188  Identities=21%  Similarity=0.186  Sum_probs=124.1

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++||||||||.||++++++|.++|++|+.++|+.                        +|++|.++++++++..     .
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~------------------------~D~~d~~~~~~~l~~~-----~   52 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD------------------------LDITNVLAVNKFFNEK-----K   52 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT------------------------CCTTCHHHHHHHHHHH-----C
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh------------------------ccCCCHHHHHHHHHHc-----C
Confidence            3599999999999999999999999999998753                        4899999998888755     7


Q ss_pred             ccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEEE
Q 022357           87 LDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVNL  166 (298)
Q Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~v  166 (298)
                      +|+|||+|+.....                           .........+..|+.....+.......     ...+++.
T Consensus        53 ~d~vih~a~~~~~~---------------------------~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~  100 (281)
T d1vl0a_          53 PNVVINCAAHTAVD---------------------------KCEEQYDLAYKINAIGPKNLAAAAYSV-----GAEIVQI  100 (281)
T ss_dssp             CSEEEECCCCCCHH---------------------------HHHHCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEE
T ss_pred             CCEEEeeccccccc---------------------------cccccchhhcccccccccccccccccc-----ccccccc
Confidence            89999999876432                           223334566778887777777766553     2356666


Q ss_pred             ccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcEE
Q 022357          167 SSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFCV  246 (298)
Q Consensus       167 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~v  246 (298)
                      ||........                               .....+...+.....|+.+|.+.+.+++..     +...
T Consensus       101 ss~~v~~~~~-------------------------------~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~-----~~~~  144 (281)
T d1vl0a_         101 STDYVFDGEA-------------------------------KEPITEFDEVNPQSAYGKTKLEGENFVKAL-----NPKY  144 (281)
T ss_dssp             EEGGGSCSCC-------------------------------SSCBCTTSCCCCCSHHHHHHHHHHHHHHHH-----CSSE
T ss_pred             ccceeeeccc-------------------------------cccccccccccchhhhhhhhhHHHHHHHHh-----CCCc
Confidence            6644332210                               001122233455678999998888766532     4456


Q ss_pred             EEeeCCeeecCCCCC---------------------CCCCChhhhhhhhhhhhccCCCCCcceEeccCc
Q 022357          247 NCVCPGFVKTDINFH---------------------AGILSVEEGAESPVKLALLPDGGPTGRFFLRKE  294 (298)
Q Consensus       247 n~v~PG~v~t~~~~~---------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  294 (298)
                      ..+.|+.+..+....                     ......++.++.....+....   .|.+.+.++
T Consensus       145 ~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~---~g~~~~~~~  210 (281)
T d1vl0a_         145 YIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKN---YGTFHCTCK  210 (281)
T ss_dssp             EEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTC---CEEEECCCB
T ss_pred             cccceeEEeCCCcccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhcc---cCceeEeCC
Confidence            678888887653211                     123566777777666665433   244444443

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.27  E-value=5.4e-11  Score=103.32  Aligned_cols=83  Identities=16%  Similarity=0.114  Sum_probs=61.6

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhh-HHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG-LEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++||||||||.||++++++|+++|++|+++.|+.... ......+......  .+.++++|+++.+.+.+.+.      
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~--~v~~v~~d~~d~~~~~~~~~------   74 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQL--GAKLIEASLDDHQRLVDALK------   74 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTT--TCEEECCCSSCHHHHHHHHT------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccC--CcEEEEeecccchhhhhhcc------
Confidence            45699999999999999999999999999999976532 1222222211111  28889999999988777664      


Q ss_pred             CCccEEEEccccC
Q 022357           85 GKLDILANNAGIA   97 (298)
Q Consensus        85 g~id~lv~nAg~~   97 (298)
                       ..+.++++++..
T Consensus        75 -~~~~~~~~~~~~   86 (312)
T d1qyda_          75 -QVDVVISALAGG   86 (312)
T ss_dssp             -TCSEEEECCCCS
T ss_pred             -Ccchhhhhhhhc
Confidence             678888888653

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.22  E-value=5.9e-11  Score=98.44  Aligned_cols=174  Identities=12%  Similarity=0.025  Sum_probs=113.7

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .|++|||||||.||++++++|+++|+  +|+...|++..             .   ..-+..+..+..++..      ..
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------------~---~~~~~~~~~d~~~~~~------~~   59 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------------E---HPRLDNPVGPLAELLP------QL   59 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------------C---CTTEECCBSCHHHHGG------GC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------------h---cccccccccchhhhhh------cc
Confidence            48999999999999999999999998  56666665421             1   1112344444433221      12


Q ss_pred             cCCccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcE
Q 022357           84 FGKLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRL  163 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~i  163 (298)
                      .+.+|.+|+++|....                             ......+..++|+.++..+++++..    .+..++
T Consensus        60 ~~~~d~vi~~~g~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~~  106 (212)
T d2a35a1          60 DGSIDTAFCCLGTTIK-----------------------------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHY  106 (212)
T ss_dssp             CSCCSEEEECCCCCHH-----------------------------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEE
T ss_pred             ccchheeeeeeeeecc-----------------------------ccccccccccchhhhhhhccccccc----cccccc
Confidence            3578999999986521                             1112235678899999998887754    455789


Q ss_pred             EEEccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCC
Q 022357          164 VNLSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPK  243 (298)
Q Consensus       164 v~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~  243 (298)
                      +++||..+..                                            .....|..+|...+.+.+    +..-
T Consensus       107 i~~Ss~~~~~--------------------------------------------~~~~~y~~~K~~~E~~l~----~~~~  138 (212)
T d2a35a1         107 LVVSALGADA--------------------------------------------KSSIFYNRVKGELEQALQ----EQGW  138 (212)
T ss_dssp             EEECCTTCCT--------------------------------------------TCSSHHHHHHHHHHHHHT----TSCC
T ss_pred             cccccccccc--------------------------------------------ccccchhHHHHHHhhhcc----cccc
Confidence            9999965432                                            335679999988876554    2211


Q ss_pred             cEEEEeeCCeeecCCCCCC------C-----------CCChhhhhhhhhhhhccCC
Q 022357          244 FCVNCVCPGFVKTDINFHA------G-----------ILSVEEGAESPVKLALLPD  282 (298)
Q Consensus       244 i~vn~v~PG~v~t~~~~~~------~-----------~~~~~~~a~~~~~~~~~~~  282 (298)
                      -++..+.|++|..+.....      .           +...++.|+.++..+..+.
T Consensus       139 ~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         139 PQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             SEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             ccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence            2577889999987643210      0           1345677777777766433

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.19  E-value=2.4e-10  Score=98.40  Aligned_cols=84  Identities=17%  Similarity=0.205  Sum_probs=63.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhh--HHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG--LEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++|+||||||||.||++++++|+++|++|++++|+....  ......+.......  +.++.+|+.+.....+.++    
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~----   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASG--ANIVHGSIDDHASLVEAVK----   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTT--CEEECCCTTCHHHHHHHHH----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCC--cEEEEeecccchhhhhhhh----
Confidence            457899999999999999999999999999999986542  22222333222221  7788999999988777765    


Q ss_pred             hcCCccEEEEccccC
Q 022357           83 QFGKLDILANNAGIA   97 (298)
Q Consensus        83 ~~g~id~lv~nAg~~   97 (298)
                         ..+.++++++..
T Consensus        76 ---~~~~vi~~~~~~   87 (307)
T d1qyca_          76 ---NVDVVISTVGSL   87 (307)
T ss_dssp             ---TCSEEEECCCGG
T ss_pred             ---hceeeeeccccc
Confidence               678999988754

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.05  E-value=2.8e-10  Score=98.43  Aligned_cols=170  Identities=18%  Similarity=0.147  Sum_probs=101.7

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH--hcC
Q 022357            9 AVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT--QFG   85 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~--~~g   85 (298)
                      ||||||+|.||++++++|+++|+ .|+++++-.... ... .+..         ...+|..+.+   ...+....  .+.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~-~~~~---------~~~~~~~~~~---~~~~~~~~~~~~~   67 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFV-NLVD---------LNIADYMDKE---DFLIQIMAGEEFG   67 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGH-HHHT---------SCCSEEEEHH---HHHHHHHTTCCCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhh-cccc---------cchhhhccch---HHHHHHhhhhccc
Confidence            89999999999999999999997 577775322211 110 1111         1112233332   33333332  235


Q ss_pred             CccEEEEccccCCcccccccccccccccccCccccchhhhhhhhHHHHHhhhhhhceeHHHHHHHHhhhhccCCCCcEEE
Q 022357           86 KLDILANNAGIASVKFDMDAFADSGYQITKGDAEVDWSKVCYQTYELAVECLKTNYYGTKQTCEALIPLLELSDSPRLVN  165 (298)
Q Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~  165 (298)
                      .++.++|.|+.....                             ........+.|+.++..+++++...    . -++++
T Consensus        68 ~~~~i~~~aa~~~~~-----------------------------~~~~~~~~~~~~~~~~~~l~~~~~~----~-i~~v~  113 (307)
T d1eq2a_          68 DVEAIFHEGACSSTT-----------------------------EWDGKYMMDNNYQYSKELLHYCLER----E-IPFLY  113 (307)
T ss_dssp             SCCEEEECCSCCCTT-----------------------------CCCHHHHHHHTHHHHHHHHHHHHHH----T-CCEEE
T ss_pred             chhhhhhhccccccc-----------------------------ccccccccccccccccccccccccc----c-ccccc
Confidence            688899998755332                             1122345677788888887776553    2 24555


Q ss_pred             EccCcccccCCchHHHhhhccCcCCCHHHHHHHHHHHHHhhhhhhhhcCCCCCCCchhhhHHHHHHHHHHHHHHhCCCcE
Q 022357          166 LSSYVSALKDLPEKARAVLGDVENLTEERIEMVVKDYFKDYEEGEIANRGWCPHSSAYKVSKAVINAYTRILAKRYPKFC  245 (298)
Q Consensus       166 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~al~~l~~~la~e~~~i~  245 (298)
                      .||.....+....                               .............|+.+|.+.+.+++.++..+ ++.
T Consensus       114 ~ss~~~~~~~~~~-------------------------------~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~~-~~~  161 (307)
T d1eq2a_         114 ASSAATYGGRTSD-------------------------------FIESREYEKPLNVYGYSKFLFDEYVRQILPEA-NSQ  161 (307)
T ss_dssp             EEEGGGGTTCCSC-------------------------------BCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC-SSC
T ss_pred             ccccccccccccc-------------------------------ccccccccccccccccccchhhhhcccccccc-ccc
Confidence            5554444322110                               00111222456889999999999999988775 677


Q ss_pred             EEEeeCCeeecCC
Q 022357          246 VNCVCPGFVKTDI  258 (298)
Q Consensus       246 vn~v~PG~v~t~~  258 (298)
                      +..+.|..+..|.
T Consensus       162 ~~~~r~~~vyGp~  174 (307)
T d1eq2a_         162 IVGFRYFNVYGPR  174 (307)
T ss_dssp             EEEEEECEEESSS
T ss_pred             cccccceeEeecc
Confidence            7777777776653

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.99  E-value=3.8e-09  Score=93.81  Aligned_cols=78  Identities=21%  Similarity=0.147  Sum_probs=58.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHH-HHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLAS-VSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~-v~~~~~~~~~~   83 (298)
                      +.|+|+||||||.||++++++|+++|++|+++.|+..+...  ..+....    .+..+++|+.+..+ ++.++      
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~~~----~v~~~~gD~~d~~~~~~~a~------   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAIP----NVTLFQGPLLNNVPLMDTLF------   69 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHTST----TEEEEESCCTTCHHHHHHHH------
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcccC----CCEEEEeeCCCcHHHHHHHh------
Confidence            46899999999999999999999999999999998775432  2222221    18899999998654 33332      


Q ss_pred             cCCccEEEEccc
Q 022357           84 FGKLDILANNAG   95 (298)
Q Consensus        84 ~g~id~lv~nAg   95 (298)
                       ...|.++++..
T Consensus        70 -~~~~~~~~~~~   80 (350)
T d1xgka_          70 -EGAHLAFINTT   80 (350)
T ss_dssp             -TTCSEEEECCC
T ss_pred             -cCCceEEeecc
Confidence             36788777654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.91  E-value=4.5e-13  Score=109.25  Aligned_cols=47  Identities=17%  Similarity=0.277  Sum_probs=42.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcC
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASG   54 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~   54 (298)
                      ++.|+||+|+||+++|+.|+++|++|++.+|++++++++.+++....
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            47788888999999999999999999999999999999999888653

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.91  E-value=1.6e-05  Score=62.50  Aligned_cols=74  Identities=20%  Similarity=0.214  Sum_probs=54.7

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +|+++|.|| |.+|+.+|+.|+++|++|++.+|+.++++.+.+.+.    .   ......+..........+.       
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~----~---~~~~~~~~~~~~~~~~~i~-------   66 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ----H---STPISLDVNDDAALDAEVA-------   66 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCT----T---EEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhccc----c---cccccccccchhhhHhhhh-------
Confidence            588999987 999999999999999999999999987776654332    1   4445556666666555543       


Q ss_pred             CccEEEEcc
Q 022357           86 KLDILANNA   94 (298)
Q Consensus        86 ~id~lv~nA   94 (298)
                      ..|.++...
T Consensus        67 ~~~~~i~~~   75 (182)
T d1e5qa1          67 KHDLVISLI   75 (182)
T ss_dssp             TSSEEEECS
T ss_pred             ccceeEeec
Confidence            457776554

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.86  E-value=4.1e-05  Score=61.04  Aligned_cols=83  Identities=19%  Similarity=0.224  Sum_probs=62.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHH---HHHhcCCCCcceeEEEeccCcHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVE---KLKASGVDPELLLFHQLDISDLASVSSLAD   78 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~   78 (298)
                      ++++|+|+|.|+ ||.|++++..|++.|. ++++..|+.++.+....   ++.....    ......|+.+.+++.....
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~   89 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTD----CVVTVTDLADQQAFAEALA   89 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS----CEEEEEETTCHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcC----cceEeeecccccchhhhhc
Confidence            467899999999 7999999999999998 68899999876655444   3433322    4455778888877665543


Q ss_pred             HHHHhcCCccEEEEccccC
Q 022357           79 FIKTQFGKLDILANNAGIA   97 (298)
Q Consensus        79 ~~~~~~g~id~lv~nAg~~   97 (298)
                             ..|++||+....
T Consensus        90 -------~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 -------SADILTNGTKVG  101 (182)
T ss_dssp             -------TCSEEEECSSTT
T ss_pred             -------ccceeccccCCc
Confidence                   789999998653

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.84  E-value=1.7e-05  Score=63.27  Aligned_cols=80  Identities=19%  Similarity=0.158  Sum_probs=54.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +|.+|||+||+||+|.+.+.-....|++|+.+++++++.    +.+++.+.+   . .  +|-.+.+..+...+..  ..
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~----~~~~~~Ga~---~-v--i~~~~~~~~~~~~~~~--~~   96 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI----AYLKQIGFD---A-A--FNYKTVNSLEEALKKA--SP   96 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH----HHHHHTTCS---E-E--EETTSCSCHHHHHHHH--CT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHH----HHHHhhhhh---h-h--cccccccHHHHHHHHh--hc
Confidence            478999999999999999988888899999999887543    333444432   1 1  3444444444433322  12


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      ..+|+++.+.|.
T Consensus        97 ~Gvd~v~D~vG~  108 (182)
T d1v3va2          97 DGYDCYFDNVGG  108 (182)
T ss_dssp             TCEEEEEESSCH
T ss_pred             CCCceeEEecCc
Confidence            369999999873

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=2.2e-05  Score=61.99  Aligned_cols=79  Identities=14%  Similarity=0.277  Sum_probs=53.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++.+|||+||+|++|...++-....|++|+++++++++.+.    +++.+.+    .  ..|.++.+-.+++.+...  -
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~----~~~~Ga~----~--vi~~~~~~~~~~i~~~t~--~   95 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI----VLQNGAH----E--VFNHREVNYIDKIKKYVG--E   95 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHTTCS----E--EEETTSTTHHHHHHHHHC--T
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccc----ccccCcc----c--ccccccccHHHHhhhhhc--c
Confidence            57899999999999999888887789999999988655332    2334432    1  236666544333322221  1


Q ss_pred             CCccEEEEccc
Q 022357           85 GKLDILANNAG   95 (298)
Q Consensus        85 g~id~lv~nAg   95 (298)
                      ..+|+++.+.|
T Consensus        96 ~g~d~v~d~~g  106 (174)
T d1yb5a2          96 KGIDIIIEMLA  106 (174)
T ss_dssp             TCEEEEEESCH
T ss_pred             CCceEEeeccc
Confidence            25999999987

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.78  E-value=3e-05  Score=62.20  Aligned_cols=86  Identities=17%  Similarity=0.133  Sum_probs=59.1

Q ss_pred             Cc-EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KK-YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~-~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      |. +++++||+|++|.+.++-.-..|++|+++.|+.+..++..+.+++.+.+    ..+..|-.+..++...+.++....
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad----~vi~~~~~~~~~~~~~v~~~~~~~  104 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT----QVITEDQNNSREFGPTIKEWIKQS  104 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS----EEEEHHHHHCGGGHHHHHHHHHHH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc----EEEeccccchhHHHHHHHHHHhhc
Confidence            44 4455899999999988766667999999999988888888888877654    233333222333444444444333


Q ss_pred             -CCccEEEEccc
Q 022357           85 -GKLDILANNAG   95 (298)
Q Consensus        85 -g~id~lv~nAg   95 (298)
                       +.+|+++.+.|
T Consensus       105 g~~vdvv~D~vg  116 (189)
T d1gu7a2         105 GGEAKLALNCVG  116 (189)
T ss_dssp             TCCEEEEEESSC
T ss_pred             cCCceEEEECCC
Confidence             47999999887

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.74  E-value=0.00011  Score=57.26  Aligned_cols=74  Identities=16%  Similarity=0.282  Sum_probs=57.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .+++++++|.|+ |++|+.+++.|.++|+ ++.++.|+.++..++..++.        ...     ...+++...+.   
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~--------~~~-----~~~~~~~~~l~---   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG--------GEA-----VRFDELVDHLA---   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT--------CEE-----CCGGGHHHHHH---
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh--------ccc-----ccchhHHHHhc---
Confidence            467899999998 9999999999999998 69999999888777776653        111     12344444443   


Q ss_pred             HhcCCccEEEEccccC
Q 022357           82 TQFGKLDILANNAGIA   97 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~   97 (298)
                          ..|++|++.+..
T Consensus        84 ----~~Divi~atss~   95 (159)
T d1gpja2          84 ----RSDVVVSATAAP   95 (159)
T ss_dssp             ----TCSEEEECCSSS
T ss_pred             ----cCCEEEEecCCC
Confidence                789999998854

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.73  E-value=0.00018  Score=55.16  Aligned_cols=81  Identities=14%  Similarity=0.125  Sum_probs=55.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      |.+++++.|.|+ |.+|..+|..|+.+|  .+|++.++++++.+.....+...............|.   ++        
T Consensus         2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~--------   69 (146)
T d1ez4a1           2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD--------   69 (146)
T ss_dssp             BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG--------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH--------
Confidence            445678889996 999999999999987  5899999999877776666664221111133333332   21        


Q ss_pred             HHhcCCccEEEEccccCC
Q 022357           81 KTQFGKLDILANNAGIAS   98 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~   98 (298)
                         ...-|++|..||...
T Consensus        70 ---~~~adivvitag~~~   84 (146)
T d1ez4a1          70 ---CKDADLVVITAGAPQ   84 (146)
T ss_dssp             ---GTTCSEEEECCCC--
T ss_pred             ---hccccEEEEeccccc
Confidence               125799999999653

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.67  E-value=0.00047  Score=52.86  Aligned_cols=83  Identities=20%  Similarity=0.254  Sum_probs=59.3

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhc-CCCCcceeEEEeccCcHHHHHHHH
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKAS-GVDPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      |.+..++++.|.|+ |.+|..+|..|+.+|.  +|++.+++++.++..+..+... ............|.   ++     
T Consensus         1 m~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~-----   71 (148)
T d1ldna1           1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DD-----   71 (148)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GG-----
T ss_pred             CCCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HH-----
Confidence            67777889999997 9999999999999875  7999999998877777777643 11121233333332   21     


Q ss_pred             HHHHHhcCCccEEEEccccCC
Q 022357           78 DFIKTQFGKLDILANNAGIAS   98 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~~   98 (298)
                            ...-|++|.++|...
T Consensus        72 ------l~daDvvvitag~~~   86 (148)
T d1ldna1          72 ------CRDADLVVICAGANQ   86 (148)
T ss_dssp             ------TTTCSEEEECCSCCC
T ss_pred             ------hccceeEEEeccccc
Confidence                  125699999999753

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=4.2e-05  Score=60.49  Aligned_cols=80  Identities=14%  Similarity=0.184  Sum_probs=54.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|+||+|++|..+++-....|++|+++++++++.+...    +.+.+    +  .+|.++.+-.+++ .++.. -
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~----~lGa~----~--vi~~~~~d~~~~v-~~~t~-g   95 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL----KAGAW----Q--VINYREEDLVERL-KEITG-G   95 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----HHTCS----E--EEETTTSCHHHHH-HHHTT-T
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH----hcCCe----E--EEECCCCCHHHHH-HHHhC-C
Confidence            4789999999999999998888888999999999987654432    23322    2  2465665433333 22211 1


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      ..+|+++.+.|.
T Consensus        96 ~g~d~v~d~~g~  107 (179)
T d1qora2          96 KKVRVVYDSVGR  107 (179)
T ss_dssp             CCEEEEEECSCG
T ss_pred             CCeEEEEeCccH
Confidence            268999998874

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.61  E-value=4.5e-05  Score=60.45  Aligned_cols=77  Identities=19%  Similarity=0.241  Sum_probs=52.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++.++||+||+|++|..++..+...|++|+++++++++.    +.+++.+.+    .+  .|-++.+-.    +++.+..
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~----~~l~~~Ga~----~v--i~~~~~~~~----~~v~~~t   90 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR----EMLSRLGVE----YV--GDSRSVDFA----DEILELT   90 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH----HHHHTTCCS----EE--EETTCSTHH----HHHHHHT
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccc----ccccccccc----cc--ccCCccCHH----HHHHHHh
Confidence            368999999999999998887777899999999886553    334444432    22  344444322    2333333


Q ss_pred             --CCccEEEEccc
Q 022357           85 --GKLDILANNAG   95 (298)
Q Consensus        85 --g~id~lv~nAg   95 (298)
                        ..+|+++.+.|
T Consensus        91 ~~~g~d~v~d~~g  103 (183)
T d1pqwa_          91 DGYGVDVVLNSLA  103 (183)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             CCCCEEEEEeccc
Confidence              26999999988

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.59  E-value=6e-05  Score=51.32  Aligned_cols=41  Identities=29%  Similarity=0.302  Sum_probs=35.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE   45 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~   45 (298)
                      ++.+++|+||+||+|...+.-+...|++|+.+.+++++.+.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~   71 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY   71 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHH
Confidence            46789999999999999988777789999999998876543

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.58  E-value=7.2e-05  Score=56.22  Aligned_cols=72  Identities=18%  Similarity=0.334  Sum_probs=56.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      +++|.|+ |.+|+.+++.|.++|+.|++++++++..+...+++   +     ..++..|.++.+.++++-      ....
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~---~-----~~vi~Gd~~~~~~l~~~~------i~~a   66 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI---D-----ALVINGDCTKIKTLEDAG------IEDA   66 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---S-----SEEEESCTTSHHHHHHTT------TTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh---h-----hhhccCcccchhhhhhcC------hhhh
Confidence            6899998 99999999999999999999999987766544331   1     677889999998766652      1357


Q ss_pred             cEEEEcc
Q 022357           88 DILANNA   94 (298)
Q Consensus        88 d~lv~nA   94 (298)
                      |.++...
T Consensus        67 ~~vv~~t   73 (132)
T d1lssa_          67 DMYIAVT   73 (132)
T ss_dssp             SEEEECC
T ss_pred             hhhcccC
Confidence            7777754

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.55  E-value=0.00012  Score=57.47  Aligned_cols=75  Identities=17%  Similarity=0.217  Sum_probs=56.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +++|+|+|.|+ ||-+++++..|.+.|.+|.+..|+.++.+++.+.+.....    +..+.  ..+.            .
T Consensus        16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~----~~~~~--~~~~------------~   76 (170)
T d1nyta1          16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGS----IQALS--MDEL------------E   76 (170)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSS----EEECC--SGGG------------T
T ss_pred             CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccc----ccccc--cccc------------c
Confidence            57899999998 8999999999999999999999999988888777665431    32222  2211            1


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                      ....|++||+....
T Consensus        77 ~~~~dliIN~Tp~G   90 (170)
T d1nyta1          77 GHEFDLIINATSSG   90 (170)
T ss_dssp             TCCCSEEEECCSCG
T ss_pred             ccccceeecccccC
Confidence            13689999987543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.52  E-value=0.00023  Score=55.53  Aligned_cols=82  Identities=26%  Similarity=0.272  Sum_probs=55.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|+| +|+||...+.-+...|++|+++++++++++...    +.+.+    ..+..|-. .++.....+.+.+..
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~----~~ga~----~~~~~~~~-~~~~~~~~~~~~~~~   95 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK----NCGAD----VTLVVDPA-KEEESSIIERIRSAI   95 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCS----EEEECCTT-TSCHHHHHHHHHHHS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHH----HcCCc----EEEecccc-ccccchhhhhhhccc
Confidence            467899997 689999999888888999999999987643332    22322    22233322 233445555666555


Q ss_pred             C-CccEEEEcccc
Q 022357           85 G-KLDILANNAGI   96 (298)
Q Consensus        85 g-~id~lv~nAg~   96 (298)
                      | .+|++|.++|.
T Consensus        96 g~g~D~vid~~g~  108 (170)
T d1e3ja2          96 GDLPNVTIDCSGN  108 (170)
T ss_dssp             SSCCSEEEECSCC
T ss_pred             ccCCceeeecCCC
Confidence            5 68999999985

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=6e-05  Score=62.16  Aligned_cols=83  Identities=13%  Similarity=0.208  Sum_probs=57.3

Q ss_pred             CCcCCCcEEEEeCC----------------CCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEE
Q 022357            1 MAEATKKYAVVTGS----------------NKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQ   64 (298)
Q Consensus         1 m~~~~~~~vlITGa----------------s~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (298)
                      |.+|.|+++|||+|                ||..|.++|+++..+|++|.++.-....          ....  .+..+ 
T Consensus         1 ~~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------~~p~--~~~~~-   67 (223)
T d1u7za_           1 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----------PTPP--FVKRV-   67 (223)
T ss_dssp             CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----------CCCT--TEEEE-
T ss_pred             CcccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc----------Cccc--ccccc-
Confidence            67899999999986                7889999999999999999887643321          0001  13333 


Q ss_pred             eccCcHHHHHHHHHHHHHhcCCccEEEEccccCCcc
Q 022357           65 LDISDLASVSSLADFIKTQFGKLDILANNAGIASVK  100 (298)
Q Consensus        65 ~Dls~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~  100 (298)
                       .+...++....+.   +.+...|++|++|++....
T Consensus        68 -~~~t~~~m~~~~~---~~~~~~D~~i~aAAvsDf~   99 (223)
T d1u7za_          68 -DVMTALEMEAAVN---ASVQQQNIFIGCAAVADYR   99 (223)
T ss_dssp             -ECCSHHHHHHHHH---HHGGGCSEEEECCBCCSEE
T ss_pred             -eehhhHHHHHHHH---hhhccceeEeeeechhhhh
Confidence             3444555444443   3445689999999987654

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.38  E-value=0.00029  Score=55.38  Aligned_cols=75  Identities=16%  Similarity=0.226  Sum_probs=57.7

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.+|.++|.|+ ||-+++++..|.+.+.+|+++.|+.++++...+.+.....    +..+..|-..              
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~----~~~~~~~~~~--------------   76 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGN----IQAVSMDSIP--------------   76 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSC----EEEEEGGGCC--------------
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccc----cchhhhcccc--------------
Confidence            56889999987 8889999999999888999999999998888888875432    4444443211              


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                      ....|++||+....
T Consensus        77 ~~~~diiIN~tp~g   90 (171)
T d1p77a1          77 LQTYDLVINATSAG   90 (171)
T ss_dssp             CSCCSEEEECCCC-
T ss_pred             ccccceeeeccccc
Confidence            23789999998654

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.31  E-value=0.00028  Score=55.39  Aligned_cols=74  Identities=18%  Similarity=0.272  Sum_probs=50.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|+||+|++|...+.-+...|++|+.+++++++.+...    +.+.+    ..  .|..+.  +    +.+. ..
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~----~lGa~----~~--i~~~~~--~----~~~~-~~   89 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL----ALGAE----EA--ATYAEV--P----ERAK-AW   89 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH----HTTCS----EE--EEGGGH--H----HHHH-HT
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc----ccccc----ee--eehhhh--h----hhhh-cc
Confidence            5789999999999999998877778999999999877654432    23332    11  233322  1    2222 22


Q ss_pred             CCccEEEEccc
Q 022357           85 GKLDILANNAG   95 (298)
Q Consensus        85 g~id~lv~nAg   95 (298)
                      ..+|+++.+.|
T Consensus        90 ~g~D~v~d~~G  100 (171)
T d1iz0a2          90 GGLDLVLEVRG  100 (171)
T ss_dssp             TSEEEEEECSC
T ss_pred             ccccccccccc
Confidence            46999999876

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.23  E-value=0.00066  Score=53.51  Aligned_cols=81  Identities=25%  Similarity=0.226  Sum_probs=53.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .|.+|+|+|+ |+||...+.-+...|+ +|+++++++++++.. ++   .+.+    .++  |.++. +.....+.+.+.
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~---lGa~----~vi--~~~~~-~~~~~~~~i~~~   95 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EE---IGAD----LTL--NRRET-SVEERRKAIMDI   95 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HH---TTCS----EEE--ETTTS-CHHHHHHHHHHH
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-cc---ccce----EEE--ecccc-chHHHHHHHHHh
Confidence            5789999997 8999998888888898 799999998765432 22   3322    222  33332 222333444443


Q ss_pred             cC--CccEEEEccccC
Q 022357           84 FG--KLDILANNAGIA   97 (298)
Q Consensus        84 ~g--~id~lv~nAg~~   97 (298)
                      .+  .+|++|.+.|..
T Consensus        96 ~~~~g~Dvvid~vG~~  111 (182)
T d1vj0a2          96 THGRGADFILEATGDS  111 (182)
T ss_dssp             TTTSCEEEEEECSSCT
T ss_pred             hCCCCceEEeecCCch
Confidence            32  599999999853

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.14  E-value=0.00054  Score=53.35  Aligned_cols=80  Identities=16%  Similarity=0.178  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+++|.|++|++|..++..+...|+ +|+++++++++.+...    +.+.+    ..  .|.++.+..++..+..  .
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~----~~Ga~----~~--i~~~~~~~~~~~~~~~--~   94 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK----RAGAD----YV--INASMQDPLAEIRRIT--E   94 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH----HHTCS----EE--EETTTSCHHHHHHHHT--T
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH----HcCCc----ee--eccCCcCHHHHHHHHh--h
Confidence            467999999999999999998888885 8888998876543332    22322    22  2344443333333221  1


Q ss_pred             cCCccEEEEcccc
Q 022357           84 FGKLDILANNAGI   96 (298)
Q Consensus        84 ~g~id~lv~nAg~   96 (298)
                      -+.+|++|.++|.
T Consensus        95 ~~~~d~vid~~g~  107 (170)
T d1jvba2          95 SKGVDAVIDLNNS  107 (170)
T ss_dssp             TSCEEEEEESCCC
T ss_pred             cccchhhhccccc
Confidence            1359999999985

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.0018  Score=50.37  Aligned_cols=80  Identities=25%  Similarity=0.307  Sum_probs=53.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+++|.|+ |++|...+.-+...|+ +|+++++++.+++.. +   +.+.+    ..+..+-.+..+   ..+.+...
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~---~~Ga~----~~~~~~~~~~~~---~~~~~~~~   93 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-K---EIGAD----LVLQISKESPQE---IARKVEGQ   93 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-H---HTTCS----EEEECSSCCHHH---HHHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-H---HhCCc----cccccccccccc---cccccccc
Confidence            4678999987 9999999988888899 799999998765532 2   22322    233333333333   33334344


Q ss_pred             cC-CccEEEEcccc
Q 022357           84 FG-KLDILANNAGI   96 (298)
Q Consensus        84 ~g-~id~lv~nAg~   96 (298)
                      ++ .+|++|.+.|.
T Consensus        94 ~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          94 LGCKPEVTIECTGA  107 (171)
T ss_dssp             HTSCCSEEEECSCC
T ss_pred             CCCCceEEEeccCC
Confidence            44 68999999985

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.08  E-value=0.00025  Score=53.10  Aligned_cols=73  Identities=16%  Similarity=0.137  Sum_probs=54.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      |+++|.|+ |-+|+.+++.|.++|+.|++++.+++..+..    ...+     ...+..|.++++.++++-      ...
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~----~~~~-----~~~~~gd~~~~~~l~~a~------i~~   64 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASYA-----THAVIANATEENELLSLG------IRN   64 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT----TTTC-----SEEEECCTTCTTHHHHHT------GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH----HHhC-----CcceeeecccchhhhccC------Ccc
Confidence            45777777 8999999999999999999999998765443    2222     456678999988766651      125


Q ss_pred             ccEEEEccc
Q 022357           87 LDILANNAG   95 (298)
Q Consensus        87 id~lv~nAg   95 (298)
                      .|.+|...+
T Consensus        65 a~~vi~~~~   73 (134)
T d2hmva1          65 FEYVIVAIG   73 (134)
T ss_dssp             CSEEEECCC
T ss_pred             ccEEEEEcC
Confidence            688877765

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.03  E-value=0.0043  Score=46.97  Aligned_cols=76  Identities=14%  Similarity=0.118  Sum_probs=48.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++.|.||+|.+|.++|..|+.+|.  ++++.+.++.+  .....+.....    +.....-+. ..+..+.++       
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~--~~a~Dl~~~~~----~~~~~~~~~-~~~~~~~~~-------   67 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP--GVAADLSHIET----RATVKGYLG-PEQLPDCLK-------   67 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH--HHHHHHTTSSS----SCEEEEEES-GGGHHHHHT-------
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccc--hhhHHHhhhhh----hcCCCeEEc-CCChHHHhC-------
Confidence            589999999999999999998875  68899987643  32334432211    111121222 333333332       


Q ss_pred             CccEEEEccccC
Q 022357           86 KLDILANNAGIA   97 (298)
Q Consensus        86 ~id~lv~nAg~~   97 (298)
                      .-|++|..||..
T Consensus        68 ~aDivVitag~~   79 (144)
T d1mlda1          68 GCDVVVIPAGVP   79 (144)
T ss_dssp             TCSEEEECCSCC
T ss_pred             CCCEEEECCCcC
Confidence            679999999974

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.00  E-value=0.00033  Score=54.89  Aligned_cols=40  Identities=28%  Similarity=0.355  Sum_probs=33.3

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE   45 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~   45 (298)
                      +.+|||+||+||+|...++-....|++|+.+++++++.+.
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~   63 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY   63 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHH
Confidence            5589999999999998886555579999999998876444

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.98  E-value=0.00097  Score=51.34  Aligned_cols=80  Identities=18%  Similarity=0.050  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhc---CCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKAS---GVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      +.+++.|.|+ |.+|..++..|+..+. ++++.+.+++.++.....+...   ....  .....  -++.   +...+  
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~--~~~~~--~~~~---~~~~~--   75 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTN--VSVRA--EYSY---EAALT--   75 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCC--CCEEE--ECSH---HHHHT--
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCe--eEEec--cCch---hhhhc--
Confidence            4567888897 9999999999888884 8999999988776666665532   1111  11111  1111   12222  


Q ss_pred             HHhcCCccEEEEccccCCc
Q 022357           81 KTQFGKLDILANNAGIASV   99 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~~   99 (298)
                           .-|++|..+|....
T Consensus        76 -----~adiVvitag~~~~   89 (154)
T d1pzga1          76 -----GADCVIVTAGLTKV   89 (154)
T ss_dssp             -----TCSEEEECCSCSSC
T ss_pred             -----CCCeEEEecccccC
Confidence                 57999999997643

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.94  E-value=0.00058  Score=53.90  Aligned_cols=39  Identities=31%  Similarity=0.341  Sum_probs=33.5

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL   44 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~   44 (298)
                      +.++||+||+||+|...++-....|++|+.+++++++.+
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~   70 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHE   70 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHH
Confidence            358999999999999888777778999999999987743

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.89  E-value=0.00076  Score=53.51  Aligned_cols=78  Identities=19%  Similarity=0.205  Sum_probs=47.7

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEE-EecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +.+|||+||+||+|...++-.-..|+++++ +++++++......++   +.+    .  ..|.++.+ +.+.++++..  
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad----~--vi~~~~~~-~~~~~~~~~~--   98 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFD----A--AVNYKTGN-VAEQLREACP--   98 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCS----E--EEETTSSC-HHHHHHHHCT--
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cce----E--Eeeccchh-HHHHHHHHhc--
Confidence            378999999999999888776668987555 455544433333332   221    2  23444433 3333333321  


Q ss_pred             CCccEEEEccc
Q 022357           85 GKLDILANNAG   95 (298)
Q Consensus        85 g~id~lv~nAg   95 (298)
                      ..+|+++.+.|
T Consensus        99 ~GvDvv~D~vG  109 (187)
T d1vj1a2          99 GGVDVYFDNVG  109 (187)
T ss_dssp             TCEEEEEESSC
T ss_pred             cCceEEEecCC
Confidence            26999999987

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.88  E-value=0.0011  Score=50.54  Aligned_cols=45  Identities=20%  Similarity=0.222  Sum_probs=35.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCch--hhHHHHHHHHh
Q 022357            8 YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEK--RGLEAVEKLKA   52 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~--~~~~~~~~~~~   52 (298)
                      ++.|.||+|.+|..+|..|+.+|  .++++.++++.  +++.....+..
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~   50 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYD   50 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchh
Confidence            58999999999999999999998  48999998864  34444445543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.87  E-value=0.0091  Score=45.13  Aligned_cols=77  Identities=17%  Similarity=0.126  Sum_probs=48.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC---CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            8 YAVVTGSNKGIGFETVRQLASK---GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~---G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++.|+|++|.+|.+++..|+.+   +.++++.+..+ ..+..+..+.......  .......-.+.   +.+ +      
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~--~~~~~~~~~~~---~~~-~------   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAV--KIKGFSGEDAT---PAL-E------   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSC--EEEEECSSCCH---HHH-T------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCcccc--CCcEEEcCCCc---ccc-C------
Confidence            6889999999999999988643   46899999764 4455555665432211  11111122222   222 2      


Q ss_pred             CCccEEEEccccCC
Q 022357           85 GKLDILANNAGIAS   98 (298)
Q Consensus        85 g~id~lv~nAg~~~   98 (298)
                       .-|++|..||...
T Consensus        69 -~aDvvvitaG~~~   81 (145)
T d2cmda1          69 -GADVVLISAGVRR   81 (145)
T ss_dssp             -TCSEEEECCSCCC
T ss_pred             -CCCEEEECCCccC
Confidence             4699999999753

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.86  E-value=0.001  Score=52.24  Aligned_cols=49  Identities=14%  Similarity=0.277  Sum_probs=43.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhc
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKAS   53 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~   53 (298)
                      .+++|.|+|.|+ ||.+++++..|.+.| +|.+..|+.++.+.+.+.+...
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~   63 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK   63 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHh
Confidence            468899999987 789999999998777 9999999999998888888753

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.85  E-value=0.0034  Score=47.43  Aligned_cols=77  Identities=12%  Similarity=0.106  Sum_probs=47.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      +++.|.|+ |.+|..++..|+.+|.  ++++.+++++.++.....+...............   +.++           .
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~~-----------~   66 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYSD-----------V   66 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHHH-----------h
Confidence            35666787 9999999999999875  7999999988776666666643221111222111   1111           2


Q ss_pred             CCccEEEEccccCC
Q 022357           85 GKLDILANNAGIAS   98 (298)
Q Consensus        85 g~id~lv~nAg~~~   98 (298)
                      ..-|++|..||...
T Consensus        67 ~~adivvitag~~~   80 (142)
T d1y6ja1          67 KDCDVIVVTAGANR   80 (142)
T ss_dssp             TTCSEEEECCCC--
T ss_pred             CCCceEEEeccccc
Confidence            35799999999653

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.85  E-value=0.00057  Score=53.93  Aligned_cols=79  Identities=18%  Similarity=0.180  Sum_probs=49.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+|||+||+||+|...++-....|++|+.+++++++.+..    ++.+.+    ..+  |-++.  ..+.+..+  .-
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~----~~lGa~----~vi--~~~~~--~~~~~~~~--~~   96 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL----RVLGAK----EVL--AREDV--MAERIRPL--DK   96 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH----HHTTCS----EEE--ECC-----------C--CS
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH----Hhcccc----eee--ecchh--HHHHHHHh--hc
Confidence            367899999999999998887777899999999987764332    333332    122  22221  11111111  12


Q ss_pred             CCccEEEEccccC
Q 022357           85 GKLDILANNAGIA   97 (298)
Q Consensus        85 g~id~lv~nAg~~   97 (298)
                      +.+|+++.+.|-.
T Consensus        97 ~gvD~vid~vgg~  109 (176)
T d1xa0a2          97 QRWAAAVDPVGGR  109 (176)
T ss_dssp             CCEEEEEECSTTT
T ss_pred             cCcCEEEEcCCch
Confidence            4799999998843

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.81  E-value=0.0011  Score=51.88  Aligned_cols=78  Identities=14%  Similarity=0.088  Sum_probs=50.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+|+|.|+ |+||...+..+...|+ +|+++++++++.+.. ++   .+.    .++  +|.++.+..+    .+.+.
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~---lGa----~~~--i~~~~~~~~~----~v~~~   91 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KF---YGA----TDI--LNYKNGHIED----QVMKL   91 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HH---HTC----SEE--ECGGGSCHHH----HHHHH
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-Hh---hCc----ccc--ccccchhHHH----HHHHH
Confidence            4678999986 8999998887777898 699999987664433 22   232    122  3444433322    23332


Q ss_pred             c-C-CccEEEEccccC
Q 022357           84 F-G-KLDILANNAGIA   97 (298)
Q Consensus        84 ~-g-~id~lv~nAg~~   97 (298)
                      . + .+|++|.++|..
T Consensus        92 t~g~G~D~vid~~g~~  107 (174)
T d1jqba2          92 TNGKGVDRVIMAGGGS  107 (174)
T ss_dssp             TTTSCEEEEEECSSCT
T ss_pred             hhccCcceEEEccCCH
Confidence            2 2 499999999864

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.77  E-value=0.013  Score=44.93  Aligned_cols=79  Identities=14%  Similarity=0.159  Sum_probs=54.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcC-CCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASG-VDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +++++.|.|+ |.+|..++..|+.+|.  ++++.+++++.....+..+.... ...........|.   ++         
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~---~~---------   85 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY---SV---------   85 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG---GG---------
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch---hh---------
Confidence            4567888896 9999999999999986  79999999888777777776421 1111122222222   22         


Q ss_pred             HhcCCccEEEEccccCC
Q 022357           82 TQFGKLDILANNAGIAS   98 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~   98 (298)
                        ...-|++|..||...
T Consensus        86 --~~~adiVVitAg~~~  100 (160)
T d1i0za1          86 --TANSKIVVVTAGVRQ  100 (160)
T ss_dssp             --GTTCSEEEECCSCCC
T ss_pred             --cccccEEEEecCCcc
Confidence              125799999999753

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.77  E-value=0.0037  Score=47.85  Aligned_cols=79  Identities=14%  Similarity=0.052  Sum_probs=47.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC---------EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI---------TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~---------~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      .+|.|+||+|.+|..++..|+..+.         .++...++.+.+......+.......  ...+...-.+    .+.+
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~   78 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL--LAGLEATDDP----KVAF   78 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--EEEEEEESCH----HHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccccc--ccccccCCch----hhhc
Confidence            4899999999999999999998653         12223344445555555555432211  2222222111    1122


Q ss_pred             HHHHHhcCCccEEEEccccCC
Q 022357           78 DFIKTQFGKLDILANNAGIAS   98 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~~   98 (298)
                             ...|++|..||...
T Consensus        79 -------~~advViitaG~~~   92 (154)
T d1y7ta1          79 -------KDADYALLVGAAPR   92 (154)
T ss_dssp             -------TTCSEEEECCCCCC
T ss_pred             -------ccccEEEeecCcCC
Confidence                   36899999999764

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.76  E-value=0.0021  Score=49.78  Aligned_cols=75  Identities=20%  Similarity=0.302  Sum_probs=50.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .|.+|+|.|+ |+||...+.-+...|++++++++++++.+ .+.++   +.+    .  .+|..+.+....       ..
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~l---Gad----~--~i~~~~~~~~~~-------~~   91 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKAL---GAD----E--VVNSRNADEMAA-------HL   91 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHH---TCS----E--EEETTCHHHHHT-------TT
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhcc---CCc----E--EEECchhhHHHH-------hc
Confidence            4789999986 99999888777778999999999887653 33333   322    1  235555443221       22


Q ss_pred             CCccEEEEccccC
Q 022357           85 GKLDILANNAGIA   97 (298)
Q Consensus        85 g~id~lv~nAg~~   97 (298)
                      ..+|++|.+.|..
T Consensus        92 ~~~D~vid~~g~~  104 (168)
T d1uufa2          92 KSFDFILNTVAAP  104 (168)
T ss_dssp             TCEEEEEECCSSC
T ss_pred             CCCceeeeeeecc
Confidence            4799999999854

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.76  E-value=0.0099  Score=45.67  Aligned_cols=80  Identities=14%  Similarity=0.148  Sum_probs=55.1

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCC-CcceeEEEeccCcHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVD-PELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      +++.++.|.|+ |.+|..+|..|+.+|.  ++++.+++++.+...+..+...... .........|.   ++        
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~~--------   84 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---NV--------   84 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---GG--------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---hh--------
Confidence            45557888896 9999999999999875  7999999988877777777753221 11122222232   21        


Q ss_pred             HHhcCCccEEEEccccCC
Q 022357           81 KTQFGKLDILANNAGIAS   98 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~~~   98 (298)
                         ...-|++|..||...
T Consensus        85 ---~~~adivvitag~~~   99 (159)
T d2ldxa1          85 ---SANSKLVIITAGARM   99 (159)
T ss_dssp             ---GTTEEEEEECCSCCC
T ss_pred             ---hccccEEEEeccccc
Confidence               136799999999754

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.74  E-value=0.0037  Score=47.41  Aligned_cols=81  Identities=15%  Similarity=0.178  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .-+++.|.||.|-+|..+++.|.++|++|.+.+|+.....+....    ..+   ...+..+   ...+...+.++....
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~----~~~---~v~~~~~---~~~~~~v~~~~~~~~   77 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA----NAD---VVIVSVP---INLTLETIERLKPYL   77 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT----TCS---EEEECSC---GGGHHHHHHHHGGGC
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh----hcc---ccccccc---hhhheeeeecccccc
Confidence            346899999999999999999999999999999987654432211    111   3333333   345555555555443


Q ss_pred             CCccEEEEccc
Q 022357           85 GKLDILANNAG   95 (298)
Q Consensus        85 g~id~lv~nAg   95 (298)
                      .+=.+++..+.
T Consensus        78 ~~~~iiiD~~S   88 (152)
T d2pv7a2          78 TENMLLADLTS   88 (152)
T ss_dssp             CTTSEEEECCS
T ss_pred             cCCceEEEecc
Confidence            22235555554

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.65  E-value=0.0037  Score=47.52  Aligned_cols=76  Identities=13%  Similarity=0.149  Sum_probs=60.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKL   87 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~i   87 (298)
                      .++|.|. |-+|+.++++|.++|..|+++..+++......++....+     +.++..|.++++.++++-      ..+.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~-----~~vi~Gd~~d~~~L~~a~------i~~a   72 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDN-----ADVIPGDSNDSSVLKKAG------IDRC   72 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTT-----CEEEESCTTSHHHHHHHT------TTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCC-----cEEEEccCcchHHHHHhc------cccC
Confidence            4788888 799999999999999999999999877666666665433     788999999998766652      1367


Q ss_pred             cEEEEccc
Q 022357           88 DILANNAG   95 (298)
Q Consensus        88 d~lv~nAg   95 (298)
                      |.+|...+
T Consensus        73 ~~vi~~~~   80 (153)
T d1id1a_          73 RAILALSD   80 (153)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEccc
Confidence            88887764

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.64  E-value=0.01  Score=44.57  Aligned_cols=76  Identities=22%  Similarity=0.142  Sum_probs=50.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            8 YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++.|.|+ |.+|..++..|+.++  .++++.++++++++.....+.....-.........|   .++    +       .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~----~-------~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YAD----L-------K   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGG----G-------T
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHH----h-------c
Confidence            4667786 899999999999886  479999999887776666655421111113333322   222    1       2


Q ss_pred             CccEEEEccccCC
Q 022357           86 KLDILANNAGIAS   98 (298)
Q Consensus        86 ~id~lv~nAg~~~   98 (298)
                      .-|++|..||...
T Consensus        67 ~adivvitag~~~   79 (140)
T d1a5za1          67 GSDVVIVAAGVPQ   79 (140)
T ss_dssp             TCSEEEECCCCCC
T ss_pred             CCCEEEEeccccc
Confidence            5699999999754

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.63  E-value=0.0051  Score=48.96  Aligned_cols=80  Identities=16%  Similarity=0.148  Sum_probs=49.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .|.+|+|.|+ |+||...+..+...|+ +|+++++++++++..    ++.+.    -+  ..|-.+. ++.+.+.++.. 
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a----~~~Ga----~~--~~~~~~~-~~~~~i~~~t~-   91 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA----KAQGF----EI--ADLSLDT-PLHEQIAALLG-   91 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTC----EE--EETTSSS-CHHHHHHHHHS-
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhh----hhccc----cE--EEeCCCc-CHHHHHHHHhC-
Confidence            4789999986 8999877777767787 788888887654332    22232    11  1233333 33333333321 


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                      -..+|++|.+.|..
T Consensus        92 g~g~D~vid~vG~~  105 (195)
T d1kola2          92 EPEVDCAVDAVGFE  105 (195)
T ss_dssp             SSCEEEEEECCCTT
T ss_pred             CCCcEEEEECcccc
Confidence            13699999999854

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.59  E-value=0.016  Score=43.63  Aligned_cols=75  Identities=19%  Similarity=0.174  Sum_probs=49.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEecC--chhhHHHHHHHHh-cCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARD--EKRGLEAVEKLKA-SGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~--~~~~~~~~~~~~~-~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ++.|.||+|.+|.++|..|+.+|.  ++++.+.+  ++.++.....+.. .... ........|   .++          
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~-~~~~i~~~~---~~~----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYD-SNTRVRQGG---YED----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTT-CCCEEEECC---GGG----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhccccc-CCceEeeCC---HHH----------
Confidence            688999999999999999999875  68888854  3344444445543 1111 113333333   222          


Q ss_pred             hcCCccEEEEccccC
Q 022357           83 QFGKLDILANNAGIA   97 (298)
Q Consensus        83 ~~g~id~lv~nAg~~   97 (298)
                       ...-|++|..||..
T Consensus        68 -~~~aDiVvitaG~~   81 (142)
T d1o6za1          68 -TAGSDVVVITAGIP   81 (142)
T ss_dssp             -GTTCSEEEECCCCC
T ss_pred             -hhhcCEEEEecccc
Confidence             12579999999965

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.56  E-value=0.0044  Score=47.64  Aligned_cols=77  Identities=17%  Similarity=0.239  Sum_probs=48.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|.|+ |+||...+.-+...|++|+++++++++++..    ++.+.+    .+  .|.++.+..+.+.    +..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a----~~~Ga~----~~--i~~~~~~~~~~~~----~~~   91 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA----RKLGAS----LT--VNARQEDPVEAIQ----RDI   91 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCS----EE--EETTTSCHHHHHH----HHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh----hccCcc----cc--ccccchhHHHHHH----Hhh
Confidence            4678999886 9999998887777899999999997765432    333332    22  3445444433332    233


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +..+.+|.+++.
T Consensus        92 ~g~~~~i~~~~~  103 (166)
T d1llua2          92 GGAHGVLVTAVS  103 (166)
T ss_dssp             SSEEEEEECCSC
T ss_pred             cCCccccccccc
Confidence            445655555553

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.44  E-value=0.0048  Score=47.78  Aligned_cols=79  Identities=11%  Similarity=0.119  Sum_probs=49.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCc-HHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD-LASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~v~~~~~~~~~   82 (298)
                      .|.+|+|.|+ ||+|...+..+...|+ +|+++++++++. +.+.++-   .+    .++  |..+ .+.+.+.++... 
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~-~~ak~lG---a~----~~i--~~~~~~~~~~~~~~~~~-   95 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAKEFG---AT----ECI--NPQDFSKPIQEVLIEMT-   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHHT---CS----EEE--CGGGCSSCHHHHHHHHT-
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHH-HHHHHhC---Cc----EEE--eCCchhhHHHHHHHHHc-
Confidence            4679999998 6999999888888897 566677776664 3334433   21    222  2222 233444443332 


Q ss_pred             hcCCccEEEEcccc
Q 022357           83 QFGKLDILANNAGI   96 (298)
Q Consensus        83 ~~g~id~lv~nAg~   96 (298)
                       .+.+|++|.+.|.
T Consensus        96 -~~g~D~vid~~G~  108 (176)
T d2fzwa2          96 -DGGVDYSFECIGN  108 (176)
T ss_dssp             -TSCBSEEEECSCC
T ss_pred             -CCCCcEeeecCCC
Confidence             2379999999985

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.44  E-value=0.0054  Score=47.92  Aligned_cols=80  Identities=16%  Similarity=0.148  Sum_probs=52.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHH-HHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLAS-VSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~-v~~~~~~~~~   82 (298)
                      .+.+|+|.|+ ||+|...+..+...|+ +|+++++++++++.. .++   +.+    .++  |-++.+. .+...+.. .
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~A-k~~---GA~----~~i--n~~~~~~~~~~~~~~~-~   96 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKA-MAV---GAT----ECI--SPKDSTKPISEVLSEM-T   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHH---TCS----EEE--CGGGCSSCHHHHHHHH-H
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHH-Hhc---CCc----EEE--CccccchHHHHHHHHh-c
Confidence            4789999986 9999999999999995 799999998876543 332   221    222  2233222 22222222 1


Q ss_pred             hcCCccEEEEccccC
Q 022357           83 QFGKLDILANNAGIA   97 (298)
Q Consensus        83 ~~g~id~lv~nAg~~   97 (298)
                       -..+|++|.+.|..
T Consensus        97 -g~G~d~vi~~~g~~  110 (176)
T d1d1ta2          97 -GNNVGYTFEVIGHL  110 (176)
T ss_dssp             -TSCCCEEEECSCCH
T ss_pred             -cccceEEEEeCCch
Confidence             13699999999854

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.40  E-value=0.0039  Score=48.65  Aligned_cols=80  Identities=18%  Similarity=0.218  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHH-HHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLA-SVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~-~v~~~~~~~~~   82 (298)
                      .+.+|+|.|+ ||+|...+..+...|+ +|+++++++++++...    +.+..    .+  .|.++.+ .+.+.....  
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~----~lGa~----~~--i~~~~~d~~~~~~~~~~--   93 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI----ELGAT----EC--LNPKDYDKPIYEVICEK--   93 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HTTCS----EE--ECGGGCSSCHHHHHHHH--
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH----HcCCc----EE--EcCCCchhHHHHHHHHh--
Confidence            4679999986 9999999999998997 6888999987764442    23322    22  2333332 233332222  


Q ss_pred             hcCCccEEEEccccC
Q 022357           83 QFGKLDILANNAGIA   97 (298)
Q Consensus        83 ~~g~id~lv~nAg~~   97 (298)
                      ..+.+|++|.+.|..
T Consensus        94 ~~~G~d~vid~~g~~  108 (174)
T d1p0fa2          94 TNGGVDYAVECAGRI  108 (174)
T ss_dssp             TTSCBSEEEECSCCH
T ss_pred             cCCCCcEEEEcCCCc
Confidence            124799999999853

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.40  E-value=0.0057  Score=47.88  Aligned_cols=79  Identities=16%  Similarity=0.014  Sum_probs=47.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCC---C----EEEEEecCch--hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKG---I----TVVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G---~----~Vii~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      .+|.||||+|.||..++..|++..   .    .+.+.+....  .+....-+++......  ...... -++.   .+. 
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~--~~~~~~-~~~~---~~~-   97 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPL--LREVSI-GIDP---YEV-   97 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--EEEEEE-ESCH---HHH-
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccccc--ccCccc-cccc---hhh-
Confidence            369999999999999999999743   2    3445554432  3455555555443221  211111 1121   122 


Q ss_pred             HHHHHhcCCccEEEEccccCC
Q 022357           78 DFIKTQFGKLDILANNAGIAS   98 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~~   98 (298)
                            +...|++|..+|...
T Consensus        98 ------~~~aDvVvi~ag~~r  112 (175)
T d7mdha1          98 ------FEDVDWALLIGAKPR  112 (175)
T ss_dssp             ------TTTCSEEEECCCCCC
T ss_pred             ------ccCCceEEEeeccCC
Confidence                  237899999998753

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.39  E-value=0.021  Score=43.11  Aligned_cols=77  Identities=13%  Similarity=0.120  Sum_probs=52.1

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcC-CCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASG-VDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      |++.|.|+ |.+|..+|..|+.+|.  ++++.++++++++.....+.... ...........   +.++           
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~---d~~~-----------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DWAA-----------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CGGG-----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceecc---CHHH-----------
Confidence            66778895 9999999999999874  79999999887777666666421 11111222222   2222           


Q ss_pred             cCCccEEEEccccCC
Q 022357           84 FGKLDILANNAGIAS   98 (298)
Q Consensus        84 ~g~id~lv~nAg~~~   98 (298)
                      ...-|++|..||...
T Consensus        67 l~~adiVVitaG~~~   81 (146)
T d1hyha1          67 LADADVVISTLGNIK   81 (146)
T ss_dssp             GTTCSEEEECCSCGG
T ss_pred             hccccEEEEeccccc
Confidence            125699999999753

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.36  E-value=0.0062  Score=47.32  Aligned_cols=79  Identities=15%  Similarity=0.156  Sum_probs=49.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEE-EEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVV-LTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vi-i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+++|.|+ |+||...+..+...|++++ ++++++.+++.. +++   +.    .++  .|..+.+ +.+.+.++.  
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~---Ga----~~~--i~~~~~~-~~~~i~~~t--   93 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GA----THV--INSKTQD-PVAAIKEIT--   93 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TC----SEE--EETTTSC-HHHHHHHHT--
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc---CC----eEE--EeCCCcC-HHHHHHHHc--
Confidence            4678999997 8999999988877898654 566666553332 333   32    223  3444433 333233332  


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                      -+.+|++|.+.|..
T Consensus        94 ~gg~D~vid~~G~~  107 (174)
T d1f8fa2          94 DGGVNFALESTGSP  107 (174)
T ss_dssp             TSCEEEEEECSCCH
T ss_pred             CCCCcEEEEcCCcH
Confidence            14799999999853

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.36  E-value=0.0021  Score=48.53  Aligned_cols=77  Identities=23%  Similarity=0.146  Sum_probs=49.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC--CEEEEEecCchhhHHHHHHHHhcCC-CCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKG--ITVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G--~~Vii~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ++.|+|+ |.+|..++..|+.+|  .++++.+++++.++.....+..... ..........  .+.++           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence            4677796 999999999999987  5899999998876665545443210 0001222222  22222           1


Q ss_pred             CCccEEEEccccCC
Q 022357           85 GKLDILANNAGIAS   98 (298)
Q Consensus        85 g~id~lv~nAg~~~   98 (298)
                      ...|++|..||...
T Consensus        68 ~dadvvvitag~~~   81 (142)
T d1guza1          68 ANSDIVIITAGLPR   81 (142)
T ss_dssp             TTCSEEEECCSCCC
T ss_pred             cCCeEEEEEEecCC
Confidence            26799999999753

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.29  E-value=0.0027  Score=49.30  Aligned_cols=45  Identities=22%  Similarity=0.313  Sum_probs=38.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKL   50 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~   50 (298)
                      ++++|+|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            5678999988 9999999999999997 7999999988777766554

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.28  E-value=0.0021  Score=48.61  Aligned_cols=45  Identities=24%  Similarity=0.189  Sum_probs=35.8

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLK   51 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~   51 (298)
                      +|++.|.|+ |.+|.++|..|+.++. ++++.+.+++........+.
T Consensus         1 r~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~   46 (142)
T d1uxja1           1 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLY   46 (142)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhh
Confidence            356777786 9999999999998875 89999998877666555554

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.24  E-value=0.0021  Score=44.77  Aligned_cols=39  Identities=21%  Similarity=0.244  Sum_probs=34.8

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      +++++|+++|.|. |.-|+++|+.|+++|++|++.+.+..
T Consensus         1 ~~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           1 ADYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CCcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            4688999999998 77899999999999999999998654

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.19  E-value=0.034  Score=41.73  Aligned_cols=77  Identities=18%  Similarity=0.165  Sum_probs=50.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++.|.|+ |.+|.++|..|+.+|.  ++++.+++++.++.....++....-.........  .+.++    +       .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~----~-------~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI----C-------R   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG----G-------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHH----h-------h
Confidence            4667787 9999999999999875  7999999988777666666642111001222211  12221    1       1


Q ss_pred             CccEEEEccccCC
Q 022357           86 KLDILANNAGIAS   98 (298)
Q Consensus        86 ~id~lv~nAg~~~   98 (298)
                      .-|++|..||...
T Consensus        69 daDvVVitaG~~~   81 (143)
T d1llda1          69 DADMVVITAGPRQ   81 (143)
T ss_dssp             TCSEEEECCCCCC
T ss_pred             CCcEEEEeccccc
Confidence            4699999999753

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.11  E-value=0.0043  Score=47.93  Aligned_cols=76  Identities=18%  Similarity=0.220  Sum_probs=49.1

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+++|.|+ |++|...++.+...|++|+++++++++++.. .+   .+.+    .++  |-.+..+..      ....
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~---lGa~----~~i--~~~~~~~~~------~~~~   89 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MK---MGAD----HYI--ATLEEGDWG------EKYF   89 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HH---HTCS----EEE--EGGGTSCHH------HHSC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hc---cCCc----EEe--eccchHHHH------Hhhh
Confidence            4789999987 8999998776666799999999998775543 23   2322    122  222222211      1223


Q ss_pred             CCccEEEEccccC
Q 022357           85 GKLDILANNAGIA   97 (298)
Q Consensus        85 g~id~lv~nAg~~   97 (298)
                      +.+|.++.+.+..
T Consensus        90 ~~~d~vi~~~~~~  102 (168)
T d1piwa2          90 DTFDLIVVCASSL  102 (168)
T ss_dssp             SCEEEEEECCSCS
T ss_pred             cccceEEEEecCC
Confidence            4789999887754

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.10  E-value=0.0059  Score=48.44  Aligned_cols=44  Identities=25%  Similarity=0.252  Sum_probs=38.4

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK   51 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~   51 (298)
                      |++.|.|| |-+|+.+|..++.+|++|++.+++++.++...+.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            78999998 889999999999999999999999987766655554

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.10  E-value=0.009  Score=45.69  Aligned_cols=39  Identities=18%  Similarity=0.323  Sum_probs=32.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGL   44 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~   44 (298)
                      .+.+++|.|+ |+||...+..+...|++|++++++++++.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~   65 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLE   65 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhh
Confidence            4678999875 99999988888888999999999887654

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.09  E-value=0.0092  Score=46.22  Aligned_cols=80  Identities=14%  Similarity=0.204  Sum_probs=52.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH-HHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~   82 (298)
                      .|.+|+|.|+ ||+|...+..+...|+ +|+++++++++.+.. .+   .+..    ..  .|-.+. +.+.+..+... 
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a-~~---~Ga~----~~--i~~~~~~~~~~~~~~~~~-   95 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KE---VGAT----EC--VNPQDYKKPIQEVLTEMS-   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HH---TTCS----EE--ECGGGCSSCHHHHHHHHT-
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH-HH---hCCe----eE--EecCCchhHHHHHHHHHh-
Confidence            4679999999 7899999999999985 788899998775433 22   2221    11  222222 33444443332 


Q ss_pred             hcCCccEEEEccccC
Q 022357           83 QFGKLDILANNAGIA   97 (298)
Q Consensus        83 ~~g~id~lv~nAg~~   97 (298)
                       .+.+|++|.+.|..
T Consensus        96 -~~G~D~vid~~G~~  109 (176)
T d2jhfa2          96 -NGGVDFSFEVIGRL  109 (176)
T ss_dssp             -TSCBSEEEECSCCH
T ss_pred             -cCCCCEEEecCCch
Confidence             24799999999864

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.90  E-value=0.0063  Score=47.18  Aligned_cols=42  Identities=29%  Similarity=0.181  Sum_probs=36.3

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVE   48 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~   48 (298)
                      +|++.|.|+ |.+|.++|..|+++|+.|.+.+|+++..+...+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            478999999 999999999999999999999999876555443

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.86  E-value=0.0065  Score=46.62  Aligned_cols=85  Identities=15%  Similarity=0.168  Sum_probs=53.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHH--hc-----CCCCcceeEEEeccCcHHHHHHHHHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK--AS-----GVDPELLLFHQLDISDLASVSSLADFI   80 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~Dls~~~~v~~~~~~~   80 (298)
                      ++.|.|. |-+|.++|+.|.++|++|++.+|+++..+...+.-.  ..     ......+.++.+   ..+.++++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence            3566665 999999999999999999999999776554333210  00     001122434333   356777888877


Q ss_pred             HHhcCCccEEEEcccc
Q 022357           81 KTQFGKLDILANNAGI   96 (298)
Q Consensus        81 ~~~~g~id~lv~nAg~   96 (298)
                      .....+=.+++..++.
T Consensus        78 ~~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          78 IPHLSPTAIVTDVASV   93 (165)
T ss_dssp             GGGSCTTCEEEECCSC
T ss_pred             hhhcccccceeecccc
Confidence            6655444456665543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.85  E-value=0.022  Score=43.86  Aligned_cols=77  Identities=14%  Similarity=0.118  Sum_probs=56.8

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ..+++|.|+ |-.|.+.++-....|+.|.+++.+.++++++...+...      +..   -.++.+.+++.+.       
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~------~~~---~~~~~~~l~~~~~-------   94 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR------VEL---LYSNSAEIETAVA-------   94 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG------SEE---EECCHHHHHHHHH-------
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccc------cee---ehhhhhhHHHhhc-------
Confidence            467999998 78899999999999999999999988776655444322      222   2455666665554       


Q ss_pred             CccEEEEccccCCc
Q 022357           86 KLDILANNAGIASV   99 (298)
Q Consensus        86 ~id~lv~nAg~~~~   99 (298)
                      ..|++|..+-+...
T Consensus        95 ~aDivI~aalipG~  108 (168)
T d1pjca1          95 EADLLIGAVLVPGR  108 (168)
T ss_dssp             TCSEEEECCCCTTS
T ss_pred             cCcEEEEeeecCCc
Confidence            67999999976554

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.83  E-value=0.0059  Score=49.43  Aligned_cols=39  Identities=38%  Similarity=0.451  Sum_probs=34.5

Q ss_pred             CCcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            1 MAEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         1 m~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      |++-..|+|+|.|| |-.|..+|.+|+++|++|.++.|+.
T Consensus         1 ~~~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           1 LMMHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CCCCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            56666788999998 8999999999999999999999864

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.76  E-value=0.0067  Score=43.64  Aligned_cols=38  Identities=13%  Similarity=0.195  Sum_probs=34.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      ++++|+++|.|+ |.+|..-++.|++.|++|++.+....
T Consensus         9 ~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            578999999999 77999999999999999999886654

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=95.71  E-value=0.021  Score=44.29  Aligned_cols=80  Identities=16%  Similarity=0.189  Sum_probs=51.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcH-HHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDL-ASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~   82 (298)
                      .|.+|+|.|+ |+||...+..+...|+ +|+++++++++++ ..++   .+..    ..  .|.... +.++...+.+. 
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~-~a~~---~Ga~----~~--i~~~~~~~~~~~~~~~~~-   95 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP-KAKA---LGAT----DC--LNPRELDKPVQDVITELT-   95 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHH---TTCS----EE--ECGGGCSSCHHHHHHHHH-
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHH-HHHH---hCCC----cc--cCCccchhhhhhhHhhhh-
Confidence            4679999975 9999999999988998 5778888887643 2223   2321    22  222222 23333333332 


Q ss_pred             hcCCccEEEEccccC
Q 022357           83 QFGKLDILANNAGIA   97 (298)
Q Consensus        83 ~~g~id~lv~nAg~~   97 (298)
                       -+.+|++|.++|..
T Consensus        96 -~~G~d~vie~~G~~  109 (174)
T d1e3ia2          96 -AGGVDYSLDCAGTA  109 (174)
T ss_dssp             -TSCBSEEEESSCCH
T ss_pred             -cCCCcEEEEecccc
Confidence             24799999999864

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.65  E-value=0.0048  Score=50.48  Aligned_cols=47  Identities=17%  Similarity=0.170  Sum_probs=39.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL   50 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~   50 (298)
                      ++.|++++|-|- |-+|..+|+.|.+.|++|++.+.+.........+.
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~   82 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE   82 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence            578999999886 89999999999999999999998877666655543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.56  E-value=0.044  Score=42.31  Aligned_cols=85  Identities=11%  Similarity=0.032  Sum_probs=58.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHH---------------HhcCCCCcceeEEEeccCcHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL---------------KASGVDPELLLFHQLDISDLAS   72 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~Dls~~~~   72 (298)
                      .+-|.|- |-+|..+|++|+++|++|++.+|++++.+++.+.-               .....   ....+...+.+.+.
T Consensus         4 nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~---~~~~ii~~~~~~~~   79 (176)
T d2pgda2           4 DIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLK---KPRRIILLVKAGQA   79 (176)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBC---SSCEEEECSCTTHH
T ss_pred             cEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhc---ccceEEEecCchHH
Confidence            4566666 89999999999999999999999998877664431               11111   12334445667778


Q ss_pred             HHHHHHHHHHhcCCccEEEEcccc
Q 022357           73 VSSLADFIKTQFGKLDILANNAGI   96 (298)
Q Consensus        73 v~~~~~~~~~~~g~id~lv~nAg~   96 (298)
                      +....+.+.....+=+++|.....
T Consensus        80 v~~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          80 VDNFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHHHhccccCcEEEecCcc
Confidence            888888777665555677766543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.55  E-value=0.0065  Score=47.90  Aligned_cols=44  Identities=25%  Similarity=0.231  Sum_probs=37.9

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLK   51 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~   51 (298)
                      |++.|.|| |-+|+.+|..++.+|++|++.+++++.++...+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            56888898 889999999999999999999999887766655544

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.51  E-value=0.056  Score=40.77  Aligned_cols=80  Identities=18%  Similarity=0.115  Sum_probs=51.6

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCC-CCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGV-DPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.++.|.|+ |.+|.+++..|+.++. ++++.+++++.++.....+..... ..........+  +.++           
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~-----------   68 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDD-----------   68 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGG-----------
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cccc-----------
Confidence            356888896 9999999998888774 799999998877776666653210 00012222221  1211           


Q ss_pred             cCCccEEEEccccCCc
Q 022357           84 FGKLDILANNAGIASV   99 (298)
Q Consensus        84 ~g~id~lv~nAg~~~~   99 (298)
                      ...-|++|..+|....
T Consensus        69 ~~~advvvitag~~~~   84 (150)
T d1t2da1          69 LAGADVVIVTAGFTKA   84 (150)
T ss_dssp             GTTCSEEEECCSCSSC
T ss_pred             cCCCcEEEEecccccC
Confidence            1257999999997643

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.43  E-value=0.067  Score=40.40  Aligned_cols=80  Identities=14%  Similarity=0.111  Sum_probs=46.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEecCch--hhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI-------TVVLTARDEK--RGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~-------~Vii~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      .+|.|+||+|.+|.+++..|+..+.       .+++.+.++.  .++....++.......  ..  ....++..  .+.+
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~--~~--~~~~~~~~--~~~~   77 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL--LK--DVIATDKE--EIAF   77 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT--EE--EEEEESCH--HHHT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccc--cc--ccccCccc--cccc
Confidence            4799999999999999999987542       3555554433  3333333444332211  11  12222211  1112


Q ss_pred             HHHHHhcCCccEEEEccccCCc
Q 022357           78 DFIKTQFGKLDILANNAGIASV   99 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~~~   99 (298)
                             ...|++|..+|....
T Consensus        78 -------~~~dvVVitag~~~~   92 (154)
T d5mdha1          78 -------KDLDVAILVGSMPRR   92 (154)
T ss_dssp             -------TTCSEEEECCSCCCC
T ss_pred             -------CCceEEEEecccCCC
Confidence                   368999999997643

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.42  E-value=0.014  Score=46.52  Aligned_cols=43  Identities=16%  Similarity=0.181  Sum_probs=37.0

Q ss_pred             CcCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH
Q 022357            2 AEATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE   45 (298)
Q Consensus         2 ~~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~   45 (298)
                      .++.||+++|-| .|.+|+.+|+.|.+.|++|++.+.+......
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            358899999997 5889999999999999999999988765443

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.37  E-value=0.031  Score=40.04  Aligned_cols=71  Identities=15%  Similarity=0.180  Sum_probs=53.8

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +.++.|.|| |.+|+-++....+.|++|++.+.+++.-...+           .-.++..|..|.+.+.++....     
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v-----------a~~~i~~~~~d~~~l~~~~~~~-----   73 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHV-----------AHRSHVINMLDGDALRRVVELE-----   73 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-----------SSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc-----------CCeEEECCCCCHHHHHHHHHhh-----
Confidence            467999995 89999999999999999999998865311100           0356778999999988887654     


Q ss_pred             CccEEEEc
Q 022357           86 KLDILANN   93 (298)
Q Consensus        86 ~id~lv~n   93 (298)
                      .+|++..-
T Consensus        74 ~~DviT~E   81 (111)
T d1kjqa2          74 KPHYIVPE   81 (111)
T ss_dssp             CCSEEEEC
T ss_pred             CCceEEEE
Confidence            67887543

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.29  E-value=0.16  Score=37.75  Aligned_cols=44  Identities=11%  Similarity=0.010  Sum_probs=35.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHHh
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLKA   52 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~~   52 (298)
                      ++.|.|+ |.+|.++|..|+.+|.  ++++.+++++.++.....+..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~   47 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAH   47 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhh
Confidence            4677786 9999999999998874  699999998877766666653

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.11  E-value=0.011  Score=44.94  Aligned_cols=34  Identities=21%  Similarity=0.123  Sum_probs=31.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR   42 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~   42 (298)
                      +++|.|+ |.+|..++..|++.|+.|.+.+|++..
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            6888888 999999999999999999999998754

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.10  E-value=0.017  Score=44.52  Aligned_cols=79  Identities=18%  Similarity=0.214  Sum_probs=49.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .+.+++|.|+ |++|...+..+...|+ +|+++++++++++.    +++.+.+    .++  |.+ .+.++...+..  .
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~----~~~~ga~----~~i--~~~-~~~~~~~~~~~--~   97 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKL----AERLGAD----HVV--DAR-RDPVKQVMELT--R   97 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHH----HHHTTCS----EEE--ETT-SCHHHHHHHHT--T
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHH----Hhhcccc----eee--cCc-ccHHHHHHHhh--C
Confidence            4678999886 9999998888877786 56777887655333    3333322    222  333 23334333221  1


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                      -..+|++|.++|..
T Consensus        98 ~~g~d~vid~~g~~  111 (172)
T d1h2ba2          98 GRGVNVAMDFVGSQ  111 (172)
T ss_dssp             TCCEEEEEESSCCH
T ss_pred             CCCceEEEEecCcc
Confidence            12599999999853

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.95  E-value=0.011  Score=44.71  Aligned_cols=35  Identities=20%  Similarity=0.393  Sum_probs=32.2

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~   39 (298)
                      +.+|++||.|| |.+|..-++.|++.|++|++++..
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            68999999999 779999999999999999998754

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.87  E-value=0.062  Score=45.70  Aligned_cols=82  Identities=15%  Similarity=0.075  Sum_probs=54.9

Q ss_pred             CCCcEEEEeC-CCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTG-SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITG-as~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      ..|++||=.+ ++|+++.+    ++..+.+|+.++.++..++...+.++..+.++  +.++..|..+.      .+.+..
T Consensus       144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~--~~~i~~d~~~~------~~~~~~  211 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGLGN--VRVLEANAFDL------LRRLEK  211 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTCTT--EEEEESCHHHH------HHHHHH
T ss_pred             hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCCCC--cceeeccHHHH------hhhhHh
Confidence            4677888555 55555443    44457789999999988877777777655443  77788776543      223333


Q ss_pred             hcCCccEEEEccccC
Q 022357           83 QFGKLDILANNAGIA   97 (298)
Q Consensus        83 ~~g~id~lv~nAg~~   97 (298)
                      .-.++|.||.+....
T Consensus       212 ~~~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         212 EGERFDLVVLDPPAF  226 (318)
T ss_dssp             TTCCEEEEEECCCCS
T ss_pred             hhcCCCEEEEcCCcc
Confidence            345899999997544

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=94.77  E-value=0.46  Score=36.97  Aligned_cols=28  Identities=14%  Similarity=0.132  Sum_probs=23.9

Q ss_pred             hhhHHHHHHHHHHHHHHhCCCcEEEEee
Q 022357          223 YKVSKAVINAYTRILAKRYPKFCVNCVC  250 (298)
Q Consensus       223 Y~~sK~al~~l~~~la~e~~~i~vn~v~  250 (298)
                      -....+++-+|+|+++.|+|++++-+|.
T Consensus       138 ~~p~~A~l~Gl~r~~~~E~P~l~~~~vD  165 (209)
T d2fr1a2         138 RNAAHGALWGVGRVIALENPAVWGGLVD  165 (209)
T ss_dssp             SCGGGHHHHHHHHHHHHHCGGGEEEEEE
T ss_pred             CCHhHHhHHHHHHHHHHhCCCceEEEEE
Confidence            3567899999999999999998877665

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=94.73  E-value=0.039  Score=42.29  Aligned_cols=80  Identities=19%  Similarity=0.220  Sum_probs=50.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHH-HHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLAS-VSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~-v~~~~~~~~~   82 (298)
                      .+.+++|.|+ ||+|...+..+...|. +|+++++++++++..    ++.+.+    +++  |.++.++ +++...... 
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a----~~~GAd----~~i--n~~~~~~~~~~~~~~~~-   95 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA----KVFGAT----DFV--NPNDHSEPISQVLSKMT-   95 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCC----EEE--CGGGCSSCHHHHHHHHH-
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHH----HHcCCc----EEE--cCCCcchhHHHHHHhhc-
Confidence            4678999986 7788888888888876 688888888765432    233322    222  3333322 233332221 


Q ss_pred             hcCCccEEEEccccC
Q 022357           83 QFGKLDILANNAGIA   97 (298)
Q Consensus        83 ~~g~id~lv~nAg~~   97 (298)
                       -+.+|+++.+.|..
T Consensus        96 -~~G~d~vid~~G~~  109 (175)
T d1cdoa2          96 -NGGVDFSLECVGNV  109 (175)
T ss_dssp             -TSCBSEEEECSCCH
T ss_pred             -cCCcceeeeecCCH
Confidence             13799999999854

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.50  E-value=0.051  Score=42.35  Aligned_cols=40  Identities=15%  Similarity=0.133  Sum_probs=33.8

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAV   47 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~   47 (298)
                      -+|+|.|| |-.|.+.++-...-|+.|.+.+.+..+++++.
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~   69 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE   69 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH
Confidence            47889988 78899999999999999999999987655543

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.45  E-value=0.17  Score=39.67  Aligned_cols=34  Identities=12%  Similarity=0.052  Sum_probs=28.9

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhh
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRG   43 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~   43 (298)
                      +.|. |.|-+|..+|..|+++|++|++.+.+++..
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i   36 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKI   36 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence            5555 559999999999999999999999886543

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.38  E-value=0.099  Score=40.00  Aligned_cols=79  Identities=14%  Similarity=0.039  Sum_probs=52.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCC----------CCcceeEEEeccCcHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGV----------DPELLLFHQLDISDLASVS   74 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dls~~~~v~   74 (298)
                      .+.+||..|++.|   ..+..|+++|++|+.++.++..++...+..+....          ......+++.|..+.....
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~   96 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   96 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccccc
Confidence            5789999999888   57789999999999999998766665555443211          0112456777777654311


Q ss_pred             HHHHHHHHhcCCccEEEEccc
Q 022357           75 SLADFIKTQFGKLDILANNAG   95 (298)
Q Consensus        75 ~~~~~~~~~~g~id~lv~nAg   95 (298)
                      .         ...|.++....
T Consensus        97 ~---------~~~D~i~~~~~  108 (201)
T d1pjza_          97 I---------GHCAAFYDRAA  108 (201)
T ss_dssp             H---------HSEEEEEEESC
T ss_pred             c---------cceeEEEEEee
Confidence            1         15677766544

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.25  E-value=0.11  Score=39.16  Aligned_cols=86  Identities=13%  Similarity=0.081  Sum_probs=51.4

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCC----CcceeEEEeccCcHHHHHHHH---HHHH
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD----PELLLFHQLDISDLASVSSLA---DFIK   81 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~v~~~~---~~~~   81 (298)
                      +-|.|- |-+|+.+|+.|+++|++|++.+|++++.+.+.+.-......    ......+-+=+.+.++++.++   +.+.
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            555554 99999999999999999999999987766554311000000    001223334466777777765   2333


Q ss_pred             HhcCCccEEEEccc
Q 022357           82 TQFGKLDILANNAG   95 (298)
Q Consensus        82 ~~~g~id~lv~nAg   95 (298)
                      ....+=.++|.+..
T Consensus        82 ~~~~~g~iiid~sT   95 (161)
T d1vpda2          82 EGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHCCTTCEEEECSC
T ss_pred             hccCCCCEEEECCC
Confidence            33333356666554

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.20  E-value=0.09  Score=40.51  Aligned_cols=37  Identities=22%  Similarity=0.185  Sum_probs=34.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~   39 (298)
                      ++.||.++|.|-|.=+|+-++..|+++|++|..+..+
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            5789999999999999999999999999999987755

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.10  E-value=0.12  Score=41.93  Aligned_cols=34  Identities=24%  Similarity=0.394  Sum_probs=29.8

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEec
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTAR   38 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r   38 (298)
                      +++++|+|.|+ ||+|..++..|+..|- ++++++.
T Consensus        28 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          28 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            56789999996 8999999999999998 6888874

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=94.03  E-value=0.3  Score=41.21  Aligned_cols=83  Identities=10%  Similarity=0.075  Sum_probs=54.3

Q ss_pred             CCcEEEEe-CCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            5 TKKYAVVT-GSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlIT-Gas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .|++||=. .++||++.+    .+..|+ .|+.++.++..++...+.++..+....++.+++.|+-      ++++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            46777744 455655543    445677 6999999988777777776655443334788887764      23344444


Q ss_pred             hcCCccEEEEccccC
Q 022357           83 QFGKLDILANNAGIA   97 (298)
Q Consensus        83 ~~g~id~lv~nAg~~   97 (298)
                      +..++|+||...-..
T Consensus       214 ~~~~fD~Ii~DPP~f  228 (317)
T d2b78a2         214 HHLTYDIIIIDPPSF  228 (317)
T ss_dssp             TTCCEEEEEECCCCC
T ss_pred             hcCCCCEEEEcChhh
Confidence            445899999996533

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=93.91  E-value=0.13  Score=38.94  Aligned_cols=86  Identities=9%  Similarity=0.063  Sum_probs=52.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCchhhHHHHHHHH-hc--------CCCCcceeEEEeccCcHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDEKRGLEAVEKLK-AS--------GVDPELLLFHQLDISDLASVSS   75 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~Dls~~~~v~~   75 (298)
                      |+++|.|. |-||.++|+.|.+.|+  +|++.+|+++..+...+.-. ..        ......+.++.   .-.+.+..
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila---~p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS---SPVRTFRE   77 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC---SCHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc---CCchhhhh
Confidence            35788875 9999999999999986  68888888766554433210 00        00011122222   23456777


Q ss_pred             HHHHHHHhcCCccEEEEcccc
Q 022357           76 LADFIKTQFGKLDILANNAGI   96 (298)
Q Consensus        76 ~~~~~~~~~g~id~lv~nAg~   96 (298)
                      .++++.....+=.+++..++.
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            777776665444566666554

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.87  E-value=0.31  Score=41.15  Aligned_cols=83  Identities=16%  Similarity=0.114  Sum_probs=53.1

Q ss_pred             CCcEEEEeCCC-CchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSN-KGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         5 ~~~~vlITGas-~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      .+++||=.++. |+++.+    +++.|+ +|+.++.++..++...+.+...+-. .++.++..|+.+      ....+..
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~-~~~~~~~~d~~~------~~~~~~~  213 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVE-DRMKFIVGSAFE------EMEKLQK  213 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCG-GGEEEEESCHHH------HHHHHHH
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCC-ccceeeechhhh------hhHHHHh
Confidence            36788866654 554443    455676 7999999998777776666655432 236777766542      2333334


Q ss_pred             hcCCccEEEEccccCC
Q 022357           83 QFGKLDILANNAGIAS   98 (298)
Q Consensus        83 ~~g~id~lv~nAg~~~   98 (298)
                      .-.++|+||+++....
T Consensus       214 ~~~~fD~Vi~DpP~~~  229 (324)
T d2as0a2         214 KGEKFDIVVLDPPAFV  229 (324)
T ss_dssp             TTCCEEEEEECCCCSC
T ss_pred             ccCCCCchhcCCcccc
Confidence            4458999999976543

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.58  E-value=0.074  Score=40.77  Aligned_cols=38  Identities=26%  Similarity=0.232  Sum_probs=34.0

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      .+.||.++|.|-|.-+|+-++..|.++|++|.++.+..
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t   71 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT   71 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhcccccccccc
Confidence            36799999999999999999999999999998886543

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.58  E-value=0.046  Score=39.60  Aligned_cols=35  Identities=29%  Similarity=0.316  Sum_probs=31.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      .+|+++|.|| |.+|.++|..|++.|.+|.++.+.+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            4678888877 8999999999999999999998875

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.55  E-value=0.068  Score=40.87  Aligned_cols=39  Identities=28%  Similarity=0.315  Sum_probs=34.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR   42 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~   42 (298)
                      ++.||+++|.|= |-||+.+|+.|...|++|+++..++-+
T Consensus        21 ~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          21 MIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            468999999986 699999999999999999999998753

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.55  E-value=0.053  Score=39.21  Aligned_cols=35  Identities=20%  Similarity=0.368  Sum_probs=31.6

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      +++++|.|| |.+|.++|..|+++|.+|.++.+.+.
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            578888887 89999999999999999999998764

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.47  E-value=0.18  Score=39.59  Aligned_cols=75  Identities=17%  Similarity=0.134  Sum_probs=52.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++.|++||=.|+++|   .++..++.+|+ +|+.++.++..++...+.++..+..   ..++..|+...           
T Consensus        44 dl~g~~vLDlg~GtG---~l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~---~~~~~~d~~~~-----------  106 (201)
T d1wy7a1          44 DIEGKVVADLGAGTG---VLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGK---FKVFIGDVSEF-----------  106 (201)
T ss_dssp             SSTTCEEEEETCTTC---HHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTS---EEEEESCGGGC-----------
T ss_pred             CCCCCEEEECcCcch---HHHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCC---ceEEECchhhh-----------
Confidence            467899998886666   23444556776 8999999987776666665554433   67778886543           


Q ss_pred             HhcCCccEEEEcccc
Q 022357           82 TQFGKLDILANNAGI   96 (298)
Q Consensus        82 ~~~g~id~lv~nAg~   96 (298)
                        .+++|+||.|...
T Consensus       107 --~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 --NSRVDIVIMNPPF  119 (201)
T ss_dssp             --CCCCSEEEECCCC
T ss_pred             --CCcCcEEEEcCcc
Confidence              2489999999864

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.35  E-value=0.049  Score=48.35  Aligned_cols=34  Identities=24%  Similarity=0.396  Sum_probs=29.2

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEec
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTAR   38 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r   38 (298)
                      |.+.+|||.|+ ||||.++++.|+..|. ++.+++.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~   69 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDM   69 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEEC
Confidence            34567999999 8899999999999998 6888875

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.24  E-value=0.064  Score=41.35  Aligned_cols=39  Identities=23%  Similarity=0.167  Sum_probs=35.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      ++.||.++|.|-|.=+|+-++.-|+++|++|.++.....
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~   74 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA   74 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccc
Confidence            468999999999999999999999999999999876543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.14  E-value=0.065  Score=38.25  Aligned_cols=35  Identities=29%  Similarity=0.267  Sum_probs=31.4

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      .|+++|.|| |-||.++|..|++.|.+|.++.|...
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            378889988 89999999999999999999998764

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.06  E-value=0.08  Score=37.83  Aligned_cols=37  Identities=22%  Similarity=0.212  Sum_probs=32.5

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      ..+|.++|.|| |-||.++|..|++.|.+|.++.|.+.
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            45688888887 89999999999999999999998753

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.74  E-value=0.94  Score=37.88  Aligned_cols=83  Identities=13%  Similarity=0.019  Sum_probs=53.6

Q ss_pred             CCcEEEEe-CCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVT-GSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlIT-Gas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ++++||=. .+||+++.+    +++.|++|+.++.++..++...+.+...+....++.++..|+.      ++++.....
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            35677744 455554444    4567999999999988777766655544433334778877664      334444444


Q ss_pred             cCCccEEEEccccC
Q 022357           84 FGKLDILANNAGIA   97 (298)
Q Consensus        84 ~g~id~lv~nAg~~   97 (298)
                      -.++|+||++.-..
T Consensus       202 ~~~fD~IilDPP~f  215 (309)
T d2igta1         202 GSTYDIILTDPPKF  215 (309)
T ss_dssp             TCCBSEEEECCCSE
T ss_pred             CCCCCEEEECCCcc
Confidence            45899999996544

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.66  E-value=0.18  Score=36.69  Aligned_cols=74  Identities=18%  Similarity=0.237  Sum_probs=55.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEE-EecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVL-TARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      ++.|.|++|-.|++++..+.++|++++. .+++....      +     ..  .. +-.|.|.++.+.+.++...+.  +
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~-----~~--~D-VvIDFS~p~~~~~~l~~~~~~--~   65 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L-----DS--PD-VVIDFSSPEALPKTVDLCKKY--R   65 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C-----SC--CS-EEEECSCGGGHHHHHHHHHHH--T
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h-----cc--CC-EEEEecCHHHHHHHHHHHHhc--C
Confidence            5899999999999999999999999775 44443210      0     01  11 356999999999999888776  5


Q ss_pred             ccEEEEccccC
Q 022357           87 LDILANNAGIA   97 (298)
Q Consensus        87 id~lv~nAg~~   97 (298)
                      +-+|+-..|..
T Consensus        66 ~p~ViGTTG~~   76 (128)
T d1vm6a3          66 AGLVLGTTALK   76 (128)
T ss_dssp             CEEEECCCSCC
T ss_pred             CCEEEEcCCCC
Confidence            77888887764

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.64  E-value=0.062  Score=42.12  Aligned_cols=38  Identities=26%  Similarity=0.152  Sum_probs=32.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE   45 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~   45 (298)
                      +++.|.|| |-.|.++|..|++.|++|.+.+|+++..+.
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~   45 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRL   45 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHH
Confidence            46888888 779999999999999999999998765443

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.61  E-value=0.19  Score=38.69  Aligned_cols=42  Identities=17%  Similarity=0.227  Sum_probs=33.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHh
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKA   52 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~   52 (298)
                      ++.|.|+ |..|.++|..|++.|++|.+.+|..+  ++.++.++.
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~--~~~~~~i~~   43 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD--TEILKSISA   43 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG--HHHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc--HHHHHHHhh
Confidence            5678887 89999999999999999999998654  234555554

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.56  E-value=0.1  Score=39.52  Aligned_cols=38  Identities=8%  Similarity=-0.075  Sum_probs=31.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEA   46 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~   46 (298)
                      +|-|. |.|-+|+++|++|+++|++|.+.+|++++.+..
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~   40 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGL   40 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhh
Confidence            35555 459999999999999999999999997765444

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.53  E-value=0.068  Score=38.53  Aligned_cols=34  Identities=32%  Similarity=0.399  Sum_probs=30.4

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      ++.++|.|| |.+|.++|..|++.|.+|.++.|.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            367888887 8999999999999999999998875

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.48  E-value=0.25  Score=39.60  Aligned_cols=75  Identities=17%  Similarity=0.096  Sum_probs=56.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .++++|=.|++.|.   ++..|+++|.+|+.++.++.-++...+.....+..   +.++..|+.+...           .
T Consensus        37 ~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~---v~~~~~d~~~~~~-----------~   99 (246)
T d1y8ca_          37 VFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLK---PRLACQDISNLNI-----------N   99 (246)
T ss_dssp             CTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCC---CEEECCCGGGCCC-----------S
T ss_pred             CCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCcc---ceeeccchhhhcc-----------c
Confidence            45789999998884   78899999999999999987766666666554443   7888888876531           2


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +++|++++..+.
T Consensus       100 ~~fD~i~~~~~~  111 (246)
T d1y8ca_         100 RKFDLITCCLDS  111 (246)
T ss_dssp             CCEEEEEECTTG
T ss_pred             ccccccceeeee
Confidence            479999876543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.44  E-value=0.078  Score=38.41  Aligned_cols=34  Identities=24%  Similarity=0.295  Sum_probs=30.6

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      .|+++|.|| |-||.++|..|++.|.+|.++.|..
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            367889988 7899999999999999999999875

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.41  E-value=0.097  Score=37.47  Aligned_cols=34  Identities=26%  Similarity=0.296  Sum_probs=30.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      .|+++|.|| |-||.++|..|++.|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            478888888 8999999999999999999999875

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=92.31  E-value=0.12  Score=40.56  Aligned_cols=81  Identities=15%  Similarity=0.114  Sum_probs=58.9

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCCcc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGKLD   88 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~id   88 (298)
                      +=+|.|+||...++...+ . +.+|+.++++++.++...+.++.....   +.+++.+.++...+   ....  ..+++|
T Consensus        28 lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r---~~~~~~~f~~~~~~---~~~~--~~~~vd   97 (192)
T d1m6ya2          28 LDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDR---VSLFKVSYREADFL---LKTL--GIEKVD   97 (192)
T ss_dssp             EETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTT---EEEEECCGGGHHHH---HHHT--TCSCEE
T ss_pred             EEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcccccc---ccchhHHHhhHHHH---HHHc--CCCCcc
Confidence            337889999988888876 3 578999999998877777766655433   88999888765442   2211  125899


Q ss_pred             EEEEccccCCc
Q 022357           89 ILANNAGIASV   99 (298)
Q Consensus        89 ~lv~nAg~~~~   99 (298)
                      .++...|+.++
T Consensus        98 gIl~DlGvSs~  108 (192)
T d1m6ya2          98 GILMDLGVSTY  108 (192)
T ss_dssp             EEEEECSCCHH
T ss_pred             eeeeccchhHh
Confidence            99999998654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.30  E-value=0.085  Score=37.64  Aligned_cols=34  Identities=21%  Similarity=0.153  Sum_probs=30.3

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      |+++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            67888887 89999999999999999999998754

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.28  E-value=0.064  Score=43.41  Aligned_cols=34  Identities=21%  Similarity=0.306  Sum_probs=29.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      +|+|+|.|| |-=|...|.+|+++|++|+++.++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            578999988 7779999999999999999998764

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.23  E-value=0.35  Score=38.16  Aligned_cols=81  Identities=15%  Similarity=0.149  Sum_probs=58.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+||-.|+++|--.++..++...+.+|+.++.+++..+...+.+...+..+  +.++..|..+..          ...
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n--~~~~~~d~~~~~----------~~~  142 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN--VIFVCGDGYYGV----------PEF  142 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS--EEEEESCGGGCC----------GGG
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccc--cccccCchHHcc----------ccc
Confidence            46789999988887666666666567799999999888777777777665544  667777765421          112


Q ss_pred             CCccEEEEccccC
Q 022357           85 GKLDILANNAGIA   97 (298)
Q Consensus        85 g~id~lv~nAg~~   97 (298)
                      +++|.++++++..
T Consensus       143 ~~fD~I~~~~~~~  155 (213)
T d1dl5a1         143 SPYDVIFVTVGVD  155 (213)
T ss_dssp             CCEEEEEECSBBS
T ss_pred             cchhhhhhhccHH
Confidence            4799999988753

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.20  E-value=0.28  Score=36.01  Aligned_cols=77  Identities=16%  Similarity=0.226  Sum_probs=54.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC-CCEEEE-EecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            8 YAVVTGSNKGIGFETVRQLASK-GITVVL-TARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~-G~~Vii-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++.|.|++|-.|+++++.+.+. +++++. +++.. .+.    .+.....+      +-.|.|.++.+...++...+.  
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~----~~~~~~~D------vvIDFS~p~~~~~~~~~~~~~--   67 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLS----LLTDGNTE------VVIDFTHPDVVMGNLEFLIDN--   67 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTH----HHHTTTCS------EEEECCCTTTHHHHHHHHHHT--
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chh----hhccccCC------EEEEcccHHHHHHHHHHHHhc--
Confidence            5899999999999999988774 677654 44432 221    12222222      457999999999998888765  


Q ss_pred             CccEEEEccccC
Q 022357           86 KLDILANNAGIA   97 (298)
Q Consensus        86 ~id~lv~nAg~~   97 (298)
                      .+.+|+-..|..
T Consensus        68 ~~~~ViGTTG~~   79 (135)
T d1yl7a1          68 GIHAVVGTTGFT   79 (135)
T ss_dssp             TCEEEECCCCCC
T ss_pred             CCCEEEeccccc
Confidence            677888777764

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.20  E-value=0.1  Score=40.50  Aligned_cols=37  Identities=24%  Similarity=0.289  Sum_probs=32.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      ..+|+|+|.|| |--|.+.|..|+++|++|.+..++..
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            45689999998 88999999999999999999998753

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.00  E-value=0.14  Score=40.25  Aligned_cols=71  Identities=18%  Similarity=0.124  Sum_probs=49.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++.|++||=.|+++|   .++..++..|+ +|+.++.++..++...+.+    .   .+.++.+|+.+.+          
T Consensus        46 dl~Gk~VLDlGcGtG---~l~i~a~~~ga~~V~~vDid~~a~~~ar~N~----~---~~~~~~~D~~~l~----------  105 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNG---ILACGSYLLGAESVTAFDIDPDAIETAKRNC----G---GVNFMVADVSEIS----------  105 (197)
T ss_dssp             SSBTSEEEEETCTTC---HHHHHHHHTTBSEEEEEESCHHHHHHHHHHC----T---TSEEEECCGGGCC----------
T ss_pred             CCCCCEEEEeCCCCc---HHHHHHHHcCCCcccccccCHHHHHHHHHcc----c---cccEEEEehhhcC----------
Confidence            568999999998887   34455677776 6999998876544332221    1   2788889986532          


Q ss_pred             HhcCCccEEEEcccc
Q 022357           82 TQFGKLDILANNAGI   96 (298)
Q Consensus        82 ~~~g~id~lv~nAg~   96 (298)
                         +++|+||.|.-.
T Consensus       106 ---~~fD~Vi~NPPf  117 (197)
T d1ne2a_         106 ---GKYDTWIMNPPF  117 (197)
T ss_dssp             ---CCEEEEEECCCC
T ss_pred             ---CcceEEEeCccc
Confidence               589999999654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.96  E-value=0.097  Score=37.72  Aligned_cols=35  Identities=20%  Similarity=0.209  Sum_probs=31.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      .|+++|.|| |-||.++|..|++.|++|.++.+...
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            467888888 89999999999999999999998753

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.92  E-value=0.07  Score=41.05  Aligned_cols=36  Identities=14%  Similarity=0.172  Sum_probs=30.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCE-EEEEecCch
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGIT-VVLTARDEK   41 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~-Vii~~r~~~   41 (298)
                      .+|+|+|.|| |-.|...|..|+++|++ |.+..|...
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            3678999998 89999999999999995 989888653

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=91.91  E-value=0.093  Score=38.05  Aligned_cols=70  Identities=21%  Similarity=0.230  Sum_probs=50.1

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcCC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFGK   86 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g~   86 (298)
                      |.++|.|. |.+|+.++++|.  |..|+++..+++..+..    ...+     +.++..|.++++.++++-      ..+
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~----~~~~-----~~~i~Gd~~~~~~L~~a~------i~~   62 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKV----LRSG-----ANFVHGDPTRVSDLEKAN------VRG   62 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHH----HHTT-----CEEEESCTTSHHHHHHTT------CTT
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHH----HhcC-----ccccccccCCHHHHHHhh------hhc
Confidence            45788886 889999999994  66788888887654432    2222     778889999998766642      236


Q ss_pred             ccEEEEcc
Q 022357           87 LDILANNA   94 (298)
Q Consensus        87 id~lv~nA   94 (298)
                      .+.+|...
T Consensus        63 A~~vi~~~   70 (129)
T d2fy8a1          63 ARAVIVNL   70 (129)
T ss_dssp             CSEEEECC
T ss_pred             CcEEEEec
Confidence            77888765

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=91.89  E-value=0.078  Score=40.71  Aligned_cols=40  Identities=20%  Similarity=0.197  Sum_probs=33.4

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHH
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEK   49 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~   49 (298)
                      +-|. |.|-+|..++++|++.|++|++.+|++++.+.+.++
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            3344 558999999999999999999999998877776655

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.81  E-value=0.12  Score=36.98  Aligned_cols=35  Identities=26%  Similarity=0.183  Sum_probs=31.1

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      .++++|.|| |-||.++|..|++.|.+|.++.+...
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            467899988 89999999999999999999988753

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=91.78  E-value=0.13  Score=38.38  Aligned_cols=41  Identities=10%  Similarity=0.186  Sum_probs=33.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC-CEEEEEecCchhhHHHHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLASKG-ITVVLTARDEKRGLEAVEK   49 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G-~~Vii~~r~~~~~~~~~~~   49 (298)
                      ++.+.|+ |-+|.++++.|.+.| ++|++.+|++++.+.+.++
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            3566666 999999999999887 8999999998776665554

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.78  E-value=0.093  Score=37.29  Aligned_cols=35  Identities=26%  Similarity=0.268  Sum_probs=30.5

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      .++++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            467888877 99999999999999999999988653

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.53  E-value=0.15  Score=38.17  Aligned_cols=41  Identities=12%  Similarity=0.182  Sum_probs=33.5

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHH
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKL   50 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~   50 (298)
                      +.|. |+|-+|.++++.|++.|++|++.+|+.++.+++.++.
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            4555 4599999999999999999999999988776665544

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.51  E-value=0.36  Score=40.25  Aligned_cols=25  Identities=16%  Similarity=0.226  Sum_probs=22.0

Q ss_pred             CCchhHHHHHHHHHCCCEEEEEecC
Q 022357           15 NKGIGFETVRQLASKGITVVLTARD   39 (298)
Q Consensus        15 s~gIG~a~a~~La~~G~~Vii~~r~   39 (298)
                      ||..|.++|+.+..+|+.|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            5778999999999999999988644

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.21  E-value=0.5  Score=37.44  Aligned_cols=80  Identities=16%  Similarity=0.084  Sum_probs=60.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+||..|+++|--.++..+|+  |.+|+.+.++++-.....+.+...+..+  +.++..|..+-.          ...
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~n--v~~~~gd~~~g~----------~~~  143 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKN--VHVILGDGSKGF----------PPK  143 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCS--EEEEESCGGGCC----------GGG
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCce--eEEEECccccCC----------ccc
Confidence            46789999999998888877777  5679999999876666666777666554  889998886421          123


Q ss_pred             CCccEEEEccccCC
Q 022357           85 GKLDILANNAGIAS   98 (298)
Q Consensus        85 g~id~lv~nAg~~~   98 (298)
                      ++.|.++.+++...
T Consensus       144 ~pfD~Iiv~~a~~~  157 (215)
T d1jg1a_         144 APYDVIIVTAGAPK  157 (215)
T ss_dssp             CCEEEEEECSBBSS
T ss_pred             CcceeEEeeccccc
Confidence            58999999888753

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.15  E-value=0.14  Score=37.40  Aligned_cols=36  Identities=22%  Similarity=0.289  Sum_probs=31.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      .+++++|.|| |-+|.++|..|++.|.+|.++.+...
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            3678888887 89999999999999999999998754

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=90.81  E-value=0.55  Score=35.05  Aligned_cols=44  Identities=23%  Similarity=0.295  Sum_probs=31.6

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHC--CCEEEEEe--cCchhhHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFETVRQLASK--GITVVLTA--RDEKRGLEAVEKL   50 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~--G~~Vii~~--r~~~~~~~~~~~~   50 (298)
                      |++.|.|+||.||.....-+.++  .++|+.+.  +|.+.+.+.+.++
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence            57999999999999999988876  46776544  4444444444444

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.78  E-value=0.12  Score=37.22  Aligned_cols=35  Identities=26%  Similarity=0.230  Sum_probs=31.5

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      .++++|.|| |-||.++|..|++.|.+|.++.|++.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            468889988 89999999999999999999998764

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=90.74  E-value=0.098  Score=42.51  Aligned_cols=32  Identities=28%  Similarity=0.203  Sum_probs=28.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      -|+|.|| |-.|.++|.+|+++|.+|+++.++.
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            3788887 8999999999999999999999864

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=90.68  E-value=0.99  Score=31.71  Aligned_cols=82  Identities=16%  Similarity=0.148  Sum_probs=54.2

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ||++||.--..-+-..+...|-+.|++|+..+.+...   ..+.++....+   +.++-..+-+.+. -.+++++.+..+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~---al~~~~~~~~d---liilD~~mp~~~G-~e~~~~ir~~~~   73 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGRE---AVEKYKELKPD---IVTMDITMPEMNG-IDAIKEIMKIDP   73 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHHHCCS---EEEEECSCGGGCH-HHHHHHHHHHCT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHH---HHHHHHhccCC---EEEEecCCCCCCH-HHHHHHHHHhCC
Confidence            6899999999999999999999999999877666543   33344433322   4444444434433 345566777766


Q ss_pred             CccEEEEcc
Q 022357           86 KLDILANNA   94 (298)
Q Consensus        86 ~id~lv~nA   94 (298)
                      .+-+++..+
T Consensus        74 ~~pvi~ls~   82 (118)
T d1u0sy_          74 NAKIIVCSA   82 (118)
T ss_dssp             TCCEEEEEC
T ss_pred             CCcEEEEEc
Confidence            777776653

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.38  E-value=0.27  Score=36.55  Aligned_cols=36  Identities=17%  Similarity=0.126  Sum_probs=29.6

Q ss_pred             CcEEEEe-CCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            6 KKYAVVT-GSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         6 ~~~vlIT-Gas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      ++.++|. .+++.||.++|..|+++|++|.++.+...
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            4555554 46699999999999999999999998753

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.18  E-value=0.15  Score=36.70  Aligned_cols=32  Identities=25%  Similarity=0.372  Sum_probs=28.9

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~   39 (298)
                      ++++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            56888887 899999999999999999999876

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=90.15  E-value=0.13  Score=42.11  Aligned_cols=37  Identities=27%  Similarity=0.337  Sum_probs=32.5

Q ss_pred             CCcEEEEeCCCCchhHHH-----HHHHHHCCCEEEEEecCch
Q 022357            5 TKKYAVVTGSNKGIGFET-----VRQLASKGITVVLTARDEK   41 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~-----a~~La~~G~~Vii~~r~~~   41 (298)
                      .+++++|+.|-||+|+..     |..|+++|++|++++-+++
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            567888888899999986     7899999999999999875

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.88  E-value=0.81  Score=35.08  Aligned_cols=76  Identities=20%  Similarity=0.253  Sum_probs=54.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+||=.|++.|   ..+..|+++|++|+.++.++..++...+.....+..+  +.+...|+.+..-     +      
T Consensus        30 ~~grvLDiGcG~G---~~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~--~~~~~~d~~~~~~-----~------   93 (198)
T d2i6ga1          30 APGRTLDLGCGNG---RNSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDN--LQTDLVDLNTLTF-----D------   93 (198)
T ss_dssp             CSCEEEEETCTTS---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTT--EEEEECCTTTCCC-----C------
T ss_pred             CCCcEEEECCCCC---HHHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccc--hhhhheecccccc-----c------
Confidence            4568999998766   4677889999999999999887776666666554443  6777778775531     1      


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|+++++.-.
T Consensus        94 ~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 GEYDFILSTVVM  105 (198)
T ss_dssp             CCEEEEEEESCG
T ss_pred             ccccEEEEeeee
Confidence            368999877643

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=89.82  E-value=0.18  Score=40.36  Aligned_cols=35  Identities=23%  Similarity=0.279  Sum_probs=30.7

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      ..++|+|.|| |--|..+|..|+++|++|+++.|+.
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3467999998 7889999999999999999999864

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=89.69  E-value=1.1  Score=36.19  Aligned_cols=74  Identities=19%  Similarity=0.179  Sum_probs=51.6

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ..+++||=.|+++|+   ++..+++.|++|+.++.++..++...+..+..+..   ..+++.|+.+      ..     .
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~---~~~~~~d~~~------~~-----~  181 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVR---PRFLEGSLEA------AL-----P  181 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCC---CEEEESCHHH------HG-----G
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCc---eeEEeccccc------cc-----c
Confidence            467899999998885   34456778999999999998777766666654443   4566665421      11     1


Q ss_pred             cCCccEEEEcc
Q 022357           84 FGKLDILANNA   94 (298)
Q Consensus        84 ~g~id~lv~nA   94 (298)
                      .+++|+++.|-
T Consensus       182 ~~~fD~V~ani  192 (254)
T d2nxca1         182 FGPFDLLVANL  192 (254)
T ss_dssp             GCCEEEEEEEC
T ss_pred             ccccchhhhcc
Confidence            35899999873

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=89.66  E-value=0.18  Score=39.65  Aligned_cols=38  Identities=18%  Similarity=0.183  Sum_probs=33.5

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      .+.+|++.|.|. |.||+.+++.|..-|++|+..++...
T Consensus        42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            467899999987 89999999999999999999988643

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=89.58  E-value=0.24  Score=38.75  Aligned_cols=38  Identities=11%  Similarity=0.067  Sum_probs=33.9

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      .+.||++.|.|. |.||+.+|+.|..-|++|+..++...
T Consensus        46 eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          46 RIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            478899999987 89999999999999999999988654

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=89.55  E-value=0.24  Score=38.84  Aligned_cols=38  Identities=18%  Similarity=0.163  Sum_probs=33.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      ++.||++.|.|- |.||+.+|+.|..-|++|+..++...
T Consensus        40 el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            467899999997 89999999999999999999887654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=89.38  E-value=0.19  Score=41.26  Aligned_cols=35  Identities=26%  Similarity=0.327  Sum_probs=30.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      +.|+|+|.|| |--|...|..|+++|++|+++.++.
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4578999998 6779999999999999999998764

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=89.35  E-value=1.5  Score=35.82  Aligned_cols=80  Identities=18%  Similarity=0.251  Sum_probs=52.0

Q ss_pred             cEEEEeCCCCc-hhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            7 KYAVVTGSNKG-IGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         7 ~~vlITGas~g-IG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      ++++-.|+++| |+.+++ +  ...++|+.++.++..++-..+-.+..+.. .++.+...|+.+.         ....++
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~-~~~~i~~~~~~~~---------~~~~~~  178 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVS-DRFFVRKGEFLEP---------FKEKFA  178 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCT-TSEEEEESSTTGG---------GGGGTT
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCC-ceeEEeecccccc---------cccccC
Confidence            45664555555 555543 3  35789999999988776666666654432 2466777787644         222346


Q ss_pred             CccEEEEccccCCc
Q 022357           86 KLDILANNAGIASV   99 (298)
Q Consensus        86 ~id~lv~nAg~~~~   99 (298)
                      ++|++|.|.-+.+.
T Consensus       179 ~fDlIVsNPPYI~~  192 (271)
T d1nv8a_         179 SIEMILSNPPYVKS  192 (271)
T ss_dssp             TCCEEEECCCCBCG
T ss_pred             cccEEEEcccccCc
Confidence            89999999887743

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.29  E-value=0.24  Score=36.83  Aligned_cols=36  Identities=17%  Similarity=0.179  Sum_probs=29.0

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHH
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLE   45 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~   45 (298)
                      +-|.| .|-+|+++++.|+++|++|++.++++.+...
T Consensus         3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~   38 (152)
T d1i36a2           3 VGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTI   38 (152)
T ss_dssp             EEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred             EEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence            44554 5999999999999999999998877665443

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=89.26  E-value=0.48  Score=32.44  Aligned_cols=72  Identities=11%  Similarity=0.097  Sum_probs=45.6

Q ss_pred             CCcEEEEeCCCCchh-HHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTGSNKGIG-FETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITGas~gIG-~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +.|++-+.|- +|+| +++|+-|+++|+.|...++.....   .+.+.+.+     +.+...+-.  +.           
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~---~~~L~~~G-----i~v~~g~~~--~~-----------   64 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVV---TQRLAQAG-----AKIYIGHAE--EH-----------   64 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHH---HHHHHHTT-----CEEEESCCG--GG-----------
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChh---hhHHHHCC-----CeEEECCcc--cc-----------
Confidence            4567778776 5667 567999999999999999875432   23344443     333332211  11           


Q ss_pred             cCCccEEEEccccCC
Q 022357           84 FGKLDILANNAGIAS   98 (298)
Q Consensus        84 ~g~id~lv~nAg~~~   98 (298)
                      ....|++|...++..
T Consensus        65 i~~~d~vV~S~AI~~   79 (96)
T d1p3da1          65 IEGASVVVVSSAIKD   79 (96)
T ss_dssp             GTTCSEEEECTTSCT
T ss_pred             CCCCCEEEECCCcCC
Confidence            125799999988753

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=89.10  E-value=0.33  Score=36.77  Aligned_cols=39  Identities=21%  Similarity=0.221  Sum_probs=35.1

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR   42 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~   42 (298)
                      ++.||+++|.|= |-+|+.+|.+|...|++|+++..++-+
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            467999999987 889999999999999999999999843

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=89.03  E-value=0.26  Score=38.03  Aligned_cols=38  Identities=26%  Similarity=0.178  Sum_probs=33.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      .+.|+++.|.|. |.||+.+++.+..-|++|+..+|.+.
T Consensus        39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEecc-ccccccceeeeecccccccccccccc
Confidence            367899999998 66999999999999999999998753

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.96  E-value=0.8  Score=38.00  Aligned_cols=76  Identities=16%  Similarity=0.208  Sum_probs=51.3

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +++++||-.|++.|+   ++..++++|+ +|++++.++. .....+.....+. ..++.++..|+.+...          
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~-~~~a~~~~~~~~~-~~~i~~~~~~~~~l~~----------   98 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI-LYQAMDIIRLNKL-EDTITLIKGKIEEVHL----------   98 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH-HHHHHHHHHHTTC-TTTEEEEESCTTTSCC----------
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH-HHHHHHHHHHhCC-CccceEEEeeHHHhcC----------
Confidence            578999999998885   6677888887 6899988764 3333333333322 2348888888877532          


Q ss_pred             hcCCccEEEEcc
Q 022357           83 QFGKLDILANNA   94 (298)
Q Consensus        83 ~~g~id~lv~nA   94 (298)
                      ...++|+|+..-
T Consensus        99 ~~~~~D~Ivse~  110 (311)
T d2fyta1          99 PVEKVDVIISEW  110 (311)
T ss_dssp             SCSCEEEEEECC
T ss_pred             ccccceEEEEee
Confidence            113789998763

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.79  E-value=0.75  Score=36.43  Aligned_cols=74  Identities=20%  Similarity=0.147  Sum_probs=54.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      ..+++|=.|+++|   .++..|+++|++|+.++.++.-++...+.....+.+   +.+.+.|+.+..-           -
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~---i~~~~~d~~~l~~-----------~  103 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLK---IEFLQGDVLEIAF-----------K  103 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---CEEEESCGGGCCC-----------C
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccccccc---chheehhhhhccc-----------c
Confidence            3568999999887   567789999999999999987666666665554433   8889999876531           1


Q ss_pred             CCccEEEEccc
Q 022357           85 GKLDILANNAG   95 (298)
Q Consensus        85 g~id~lv~nAg   95 (298)
                      +.+|++++.-+
T Consensus       104 ~~fD~I~~~~~  114 (251)
T d1wzna1         104 NEFDAVTMFFS  114 (251)
T ss_dssp             SCEEEEEECSS
T ss_pred             cccchHhhhhh
Confidence            36898887644

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=88.73  E-value=0.35  Score=37.38  Aligned_cols=39  Identities=26%  Similarity=0.136  Sum_probs=33.4

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchh
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKR   42 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~   42 (298)
                      .+.+|++.|.|. |.||+++++.+..-|++|+..++....
T Consensus        41 ~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          41 EIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            356889999885 999999999999999999999887543

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.58  E-value=0.29  Score=38.90  Aligned_cols=35  Identities=34%  Similarity=0.425  Sum_probs=31.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      ..|+++|.|| |--|...|..|+++|++|.+..++.
T Consensus        48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            5689999998 7889999999999999999998764

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=88.43  E-value=0.45  Score=36.76  Aligned_cols=38  Identities=18%  Similarity=0.231  Sum_probs=33.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      ++.++++.|.|. |.||+++++.|..-|++|+..++...
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d2naca1          41 DLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRL   78 (188)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred             eccccceeeccc-cccchhhhhhhhccCceEEEEeeccc
Confidence            467899999986 89999999999999999999998654

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.24  E-value=2.3  Score=31.13  Aligned_cols=78  Identities=12%  Similarity=0.197  Sum_probs=50.9

Q ss_pred             CCCcEEEEeCC-CCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGS-NKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlITGa-s~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      +.|+++|=.|+ ||.+|.    +.+.+|+ +|+.++.++...+...+.++..+. ..++.+++.|....      ++   
T Consensus        13 ~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~-~~~~~ii~~D~~~~------l~---   78 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKA-ENRFTLLKMEAERA------ID---   78 (152)
T ss_dssp             CCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTC-GGGEEEECSCHHHH------HH---
T ss_pred             CCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhccc-ccchhhhccccccc------cc---
Confidence            56888885554 454555    4566787 799999998776666666665433 23588888875432      22   


Q ss_pred             HhcCCccEEEEccc
Q 022357           82 TQFGKLDILANNAG   95 (298)
Q Consensus        82 ~~~g~id~lv~nAg   95 (298)
                      ....+.|+++.++.
T Consensus        79 ~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 CLTGRFDLVFLDPP   92 (152)
T ss_dssp             HBCSCEEEEEECCS
T ss_pred             ccccccceeEechh
Confidence            22357999998753

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=88.16  E-value=0.26  Score=36.75  Aligned_cols=35  Identities=17%  Similarity=0.178  Sum_probs=29.8

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCC--EEEEEecCc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGI--TVVLTARDE   40 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~--~Vii~~r~~   40 (298)
                      .||+++|.|| |-.|.++|..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3799999998 7889999999999875  788887665

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=88.09  E-value=0.27  Score=41.23  Aligned_cols=36  Identities=28%  Similarity=0.306  Sum_probs=31.0

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      ++|+++|.|| |-=|..+|.+|+++|++|.++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            3578999998 77899999999999999999987653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=88.07  E-value=0.28  Score=35.36  Aligned_cols=34  Identities=15%  Similarity=0.150  Sum_probs=30.7

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      .+.++|.|| |-||.++|..|.+.|.+|.++.+.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            478899988 8999999999999999999998865

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=87.98  E-value=0.48  Score=36.00  Aligned_cols=77  Identities=12%  Similarity=0.067  Sum_probs=42.1

Q ss_pred             cEEEEeCCCCchhHH-HHHHHHHC-----CCEEEEEecCchhhHHHHHHHHh---cCCCCcceeEEEeccCcHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFE-TVRQLASK-----GITVVLTARDEKRGLEAVEKLKA---SGVDPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         7 ~~vlITGas~gIG~a-~a~~La~~-----G~~Vii~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      .++.|.||++ +|.. ++..++.+     +.+|++.+.++++++.....+..   ..+..  ......  +   +.++.+
T Consensus         4 ~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~---d~~eal   75 (167)
T d1u8xx1           4 FSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPD--IEFAAT--T---DPEEAF   75 (167)
T ss_dssp             EEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTT--SEEEEE--S---CHHHHH
T ss_pred             ceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCC--cceEec--C---Chhhcc
Confidence            3566777754 3433 33444432     24899999999887654444432   11111  222221  1   222333


Q ss_pred             HHHHHhcCCccEEEEccccCC
Q 022357           78 DFIKTQFGKLDILANNAGIAS   98 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~~   98 (298)
                      +       .-|+||+.+|...
T Consensus        76 ~-------~AD~Vvitag~~~   89 (167)
T d1u8xx1          76 T-------DVDFVMAHIRVGK   89 (167)
T ss_dssp             S-------SCSEEEECCCTTH
T ss_pred             C-------CCCEEEECCCcCC
Confidence            2       6799999999764

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.87  E-value=4  Score=30.20  Aligned_cols=76  Identities=11%  Similarity=-0.021  Sum_probs=40.8

Q ss_pred             EEEEeCCCCchhHHHHHHHH-H-C----CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            8 YAVVTGSNKGIGFETVRQLA-S-K----GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La-~-~----G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ++.|.||++ +|...+.... + .    +.+|++.+.+++++....+.........  ... ..- ++.   .+.+    
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~--~~~-~~t-~~~---~~~l----   69 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDR--FKV-LIS-DTF---EGAV----   69 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTS--SEE-EEC-SSH---HHHH----
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccC--ceE-EEe-cCc---cccc----
Confidence            467778743 6655553322 1 1    4589999999987765443333222211  111 111 222   1222    


Q ss_pred             HhcCCccEEEEccccCC
Q 022357           82 TQFGKLDILANNAGIAS   98 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~~   98 (298)
                         ..-|++|..||...
T Consensus        70 ---~~aDvVVita~~~~   83 (162)
T d1up7a1          70 ---VDAKYVIFQFRPGG   83 (162)
T ss_dssp             ---TTCSEEEECCCTTH
T ss_pred             ---CCCCEEEEecccCC
Confidence               25699999999753

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=87.54  E-value=2.3  Score=32.14  Aligned_cols=77  Identities=17%  Similarity=0.187  Sum_probs=53.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+||=.|+++|   .++..|++++.+|+.++.++..++...+.++..+-. .++.+++.|..+.          ....
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~-~~v~~~~gda~~~----------~~~~   98 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLG-DNVTLMEGDAPEA----------LCKI   98 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCC-TTEEEEESCHHHH----------HTTS
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCC-cceEEEECchhhc----------cccc
Confidence            4667887787776   455667778889999999998888877777765532 1388888874222          1223


Q ss_pred             CCccEEEEccc
Q 022357           85 GKLDILANNAG   95 (298)
Q Consensus        85 g~id~lv~nAg   95 (298)
                      ..+|.++.+.+
T Consensus        99 ~~~D~v~~~~~  109 (186)
T d1l3ia_          99 PDIDIAVVGGS  109 (186)
T ss_dssp             CCEEEEEESCC
T ss_pred             CCcCEEEEeCc
Confidence            57899998754

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=87.41  E-value=0.24  Score=40.27  Aligned_cols=31  Identities=26%  Similarity=0.468  Sum_probs=27.6

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      |+|.|| |-.|..+|.+|+++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            778877 8889999999999999999998753

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.31  E-value=0.29  Score=38.50  Aligned_cols=36  Identities=17%  Similarity=0.219  Sum_probs=30.6

Q ss_pred             CCcEEEEeCCCCchhHH-----HHHHHHHCCCEEEEEecCc
Q 022357            5 TKKYAVVTGSNKGIGFE-----TVRQLASKGITVVLTARDE   40 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a-----~a~~La~~G~~Vii~~r~~   40 (298)
                      ++|++.|+|+-||+|+.     +|..|+++|.+|++++-+.
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            36899999999999975     6778888999999998653

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=87.11  E-value=0.7  Score=34.41  Aligned_cols=44  Identities=20%  Similarity=0.310  Sum_probs=31.6

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHC--CCEEEEEe--cCchhhHHHHHH
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASK--GITVVLTA--RDEKRGLEAVEK   49 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~--G~~Vii~~--r~~~~~~~~~~~   49 (298)
                      .|++.|.|+||-||.....-+-++  .++|+.+.  +|.+.+.+.+.+
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~e   49 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKR   49 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHh
Confidence            489999999999999998888775  57777644  344344444433

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=87.10  E-value=1.2  Score=34.58  Aligned_cols=77  Identities=13%  Similarity=0.061  Sum_probs=54.8

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +.+||=.|++.|   .++..|+++|++|+.++-++.-.+...+.+...+..+  +.+++.|..+..-          ..+
T Consensus        16 ~~rVLDiGcG~G---~~~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~--i~~~~~d~~~l~~----------~~~   80 (231)
T d1vl5a_          16 NEEVLDVATGGG---HVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQ--VEYVQGDAEQMPF----------TDE   80 (231)
T ss_dssp             CCEEEEETCTTC---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCS--EEEEECCC-CCCS----------CTT
T ss_pred             cCEEEEecccCc---HHHHHHHHhCCEEEEEECCHHHHhhhhhccccccccc--ccccccccccccc----------ccc
Confidence            578999998888   4456788899999999998876665555555554443  8888888876531          014


Q ss_pred             CccEEEEccccC
Q 022357           86 KLDILANNAGIA   97 (298)
Q Consensus        86 ~id~lv~nAg~~   97 (298)
                      .+|+++++..+.
T Consensus        81 ~fD~v~~~~~l~   92 (231)
T d1vl5a_          81 RFHIVTCRIAAH   92 (231)
T ss_dssp             CEEEEEEESCGG
T ss_pred             cccccccccccc
Confidence            789998887653

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.04  E-value=1.4  Score=33.97  Aligned_cols=75  Identities=19%  Similarity=0.041  Sum_probs=53.9

Q ss_pred             CcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            6 KKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         6 ~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +.+||=.|+++|.   ++..|++.|++|+.++.++..++...+.....+..   +..+..|+.+...          ..+
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~---~~~~~~d~~~l~~----------~~~  101 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESN---VEFIVGDARKLSF----------EDK  101 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---CEEEECCTTSCCS----------CTT
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccc---ccccccccccccc----------cCc
Confidence            4578999998884   77889999999999999877666666666554433   6677778776431          013


Q ss_pred             CccEEEEcccc
Q 022357           86 KLDILANNAGI   96 (298)
Q Consensus        86 ~id~lv~nAg~   96 (298)
                      .+|+|+++..+
T Consensus       102 ~fD~I~~~~~l  112 (226)
T d1ve3a1         102 TFDYVIFIDSI  112 (226)
T ss_dssp             CEEEEEEESCG
T ss_pred             CceEEEEecch
Confidence            78998887653

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.96  E-value=0.27  Score=38.09  Aligned_cols=31  Identities=16%  Similarity=0.173  Sum_probs=27.8

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      |+|.|| |--|..+|..|+++|.+|+++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            788886 8889999999999999999999874

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=86.54  E-value=0.28  Score=40.36  Aligned_cols=32  Identities=16%  Similarity=0.335  Sum_probs=27.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGI-TVVLTARDE   40 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~   40 (298)
                      .|+|.|| |-+|.++|.+|+++|. +|+++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            4788888 7999999999999996 699998864

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=86.46  E-value=0.67  Score=35.89  Aligned_cols=38  Identities=11%  Similarity=0.082  Sum_probs=33.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      .+.++++.|.|. |.||+.+++.+...|++|+..++...
T Consensus        44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          44 KLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             eecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            356899999987 89999999999999999999987654

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=86.12  E-value=0.37  Score=39.90  Aligned_cols=33  Identities=21%  Similarity=0.304  Sum_probs=23.1

Q ss_pred             cEEEEeCC-CCch---hHHHHHHHHHCCCEEEEEecC
Q 022357            7 KYAVVTGS-NKGI---GFETVRQLASKGITVVLTARD   39 (298)
Q Consensus         7 ~~vlITGa-s~gI---G~a~a~~La~~G~~Vii~~r~   39 (298)
                      |++||++| |||-   ..+++.+|.++|++|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            45565554 4443   457999999999999877644

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=86.06  E-value=0.26  Score=38.27  Aligned_cols=31  Identities=19%  Similarity=0.229  Sum_probs=27.3

Q ss_pred             cEEEEeCCCCchhHH-----HHHHHHHCCCEEEEEe
Q 022357            7 KYAVVTGSNKGIGFE-----TVRQLASKGITVVLTA   37 (298)
Q Consensus         7 ~~vlITGas~gIG~a-----~a~~La~~G~~Vii~~   37 (298)
                      |++.|||-++|+|+.     +|..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999999999985     6788889999999876

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=85.94  E-value=2.4  Score=31.74  Aligned_cols=35  Identities=9%  Similarity=-0.127  Sum_probs=23.2

Q ss_pred             EEEEeCC-CCchhHHHHHHHHHCC----CEEEEEecCchh
Q 022357            8 YAVVTGS-NKGIGFETVRQLASKG----ITVVLTARDEKR   42 (298)
Q Consensus         8 ~vlITGa-s~gIG~a~a~~La~~G----~~Vii~~r~~~~   42 (298)
                      ++.|.|| +.|.+..++..+....    -++++.+.+++.
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~   42 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK   42 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH
Confidence            4566665 5667777766666532    489999998754

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=85.62  E-value=2.2  Score=32.40  Aligned_cols=79  Identities=15%  Similarity=0.082  Sum_probs=56.0

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      ..+++||=.|++.|   .++..+++.+.+|++++-++...+...+.++..+..+..+.+...|+.+.-      .     
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~------~-----  116 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV------K-----  116 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC------T-----
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh------c-----
Confidence            35678998887777   556677788899999999987766666666655444445888888876421      1     


Q ss_pred             cCCccEEEEcccc
Q 022357           84 FGKLDILANNAGI   96 (298)
Q Consensus        84 ~g~id~lv~nAg~   96 (298)
                      -+.+|++++|...
T Consensus       117 ~~~fD~Ii~~~p~  129 (194)
T d1dusa_         117 DRKYNKIITNPPI  129 (194)
T ss_dssp             TSCEEEEEECCCS
T ss_pred             cCCceEEEEcccE
Confidence            1379999998643

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=85.57  E-value=0.42  Score=39.02  Aligned_cols=34  Identities=18%  Similarity=0.276  Sum_probs=30.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEe
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA   37 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~   37 (298)
                      .+.+++++|-| .|-+|+.+++.|.+.|++|+.++
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            47889999998 59999999999999999988654

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.24  E-value=3.2  Score=30.02  Aligned_cols=89  Identities=8%  Similarity=-0.027  Sum_probs=54.8

Q ss_pred             CCcEEEEeCCC---CchhHHHHHHHHHCCCEEEEEecCchhhH--HHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHH
Q 022357            5 TKKYAVVTGSN---KGIGFETVRQLASKGITVVLTARDEKRGL--EAVEKLKASGVDPELLLFHQLDISDLASVSSLADF   79 (298)
Q Consensus         5 ~~~~vlITGas---~gIG~a~a~~La~~G~~Vii~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~   79 (298)
                      +.|++.|.|+|   +..|..+++.|.++|++|+.+..+.....  .....+.+....   +..+.. ....+.+..++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~---iD~v~i-~vp~~~~~~~~~e   93 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDK---IEVVDL-FVKPKLTMEYVEQ   93 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSC---CSEEEE-CSCHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCcc---ceEEEE-EeCHHHHHHHHHH
Confidence            45899999999   67999999999999999998875533211  011111111111   111111 1345667777777


Q ss_pred             HHHhcCCccEEEEccccCCc
Q 022357           80 IKTQFGKLDILANNAGIASV   99 (298)
Q Consensus        80 ~~~~~g~id~lv~nAg~~~~   99 (298)
                      +.+.  .+..++...|....
T Consensus        94 ~~~~--g~k~v~~~~G~~~e  111 (139)
T d2d59a1          94 AIKK--GAKVVWFQYNTYNR  111 (139)
T ss_dssp             HHHH--TCSEEEECTTCCCH
T ss_pred             HHHh--CCCEEEEeccccCH
Confidence            7665  46677777776543

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.23  E-value=0.28  Score=44.53  Aligned_cols=34  Identities=15%  Similarity=0.258  Sum_probs=28.9

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEec
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTAR   38 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r   38 (298)
                      +.+.+|+|.|+ ||+|.++++.|+..|. ++.+++.
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            45678999987 8999999999999996 6888764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=84.92  E-value=0.39  Score=36.11  Aligned_cols=33  Identities=18%  Similarity=0.187  Sum_probs=26.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEec
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTAR   38 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r   38 (298)
                      .+++|+|.|| |.+|.++|..|.+.|.+|.++.+
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~   34 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLV   34 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEe
Confidence            3578888887 89999999999999987655443

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.64  E-value=1  Score=36.02  Aligned_cols=34  Identities=21%  Similarity=0.238  Sum_probs=28.6

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHH-CCCEEEEEe
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLAS-KGITVVLTA   37 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~-~G~~Vii~~   37 (298)
                      ++++++++|-| .|-+|+.+++.|++ .|++|+.++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            46789998886 69999999999985 599988665

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=84.36  E-value=0.6  Score=37.68  Aligned_cols=34  Identities=21%  Similarity=0.206  Sum_probs=30.2

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEe
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA   37 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~   37 (298)
                      ++.+++++|-| .|-+|..+|+.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            47889999997 59999999999999999998655

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.22  E-value=0.35  Score=39.35  Aligned_cols=33  Identities=21%  Similarity=0.268  Sum_probs=29.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      .|+|.|| |-.|..+|..|+++|.+|+++.|.+.
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            5899998 59999999999999999999998753

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.10  E-value=4.2  Score=30.67  Aligned_cols=81  Identities=10%  Similarity=0.103  Sum_probs=52.4

Q ss_pred             CCCcEEEEe-CCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHH
Q 022357            4 ATKKYAVVT-GSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         4 ~~~~~vlIT-Gas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      ..++++|=. .|||.+|.    +.+++|+ .|+.++.+....+...+.++..+.. .++.++..|+.+      +++.+.
T Consensus        40 ~~~~~vLDlfaGsG~~g~----ea~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~-~~~~i~~~D~~~------~l~~~~  108 (182)
T d2fhpa1          40 FDGGMALDLYSGSGGLAI----EAVSRGMDKSICIEKNFAALKVIKENIAITKEP-EKFEVRKMDANR------ALEQFY  108 (182)
T ss_dssp             CSSCEEEETTCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEEESCHHH------HHHHHH
T ss_pred             cCCCEEEEcccccccccc----eeeecchhHHHHHHHHHHHHHHHHHHhhhhhcc-cccccccccchh------hhhhhc
Confidence            457777744 45555655    4566888 5999999988777776666644322 237777776643      344444


Q ss_pred             HhcCCccEEEEccc
Q 022357           82 TQFGKLDILANNAG   95 (298)
Q Consensus        82 ~~~g~id~lv~nAg   95 (298)
                      ....++|+++...-
T Consensus       109 ~~~~~fDlIflDPP  122 (182)
T d2fhpa1         109 EEKLQFDLVLLDPP  122 (182)
T ss_dssp             HTTCCEEEEEECCC
T ss_pred             ccCCCcceEEechh
Confidence            44457999998763

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=84.03  E-value=1.8  Score=31.84  Aligned_cols=85  Identities=13%  Similarity=0.110  Sum_probs=51.1

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCC---CCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGV---DPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      +-+.|- |-.|..+|++|++.|+.| +.+|+.++.....++......   .......+-..+.+.+.+....+.+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            455555 899999999999988865 577877766555554332110   001123333445566777777776665544


Q ss_pred             CccEEEEccc
Q 022357           86 KLDILANNAG   95 (298)
Q Consensus        86 ~id~lv~nAg   95 (298)
                      +-.++|.++-
T Consensus        81 ~~~~iid~sT   90 (156)
T d2cvza2          81 EGTYWVDATS   90 (156)
T ss_dssp             TTEEEEECSC
T ss_pred             cccccccccc
Confidence            4445555544

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=83.98  E-value=1.6  Score=34.51  Aligned_cols=76  Identities=16%  Similarity=-0.098  Sum_probs=50.2

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+||-.|+++|--.+   .|++.+.+|+.+.++++..+...+.+.. . .  ++.++..|...--          ...
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~-~-~--nv~~~~~d~~~g~----------~~~  132 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSY-Y-N--NIKLILGDGTLGY----------EEE  132 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTT-C-S--SEEEEESCGGGCC----------GGG
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhc-c-c--ccccccCchhhcc----------hhh
Confidence            46789999998885443   4666677999999887655444333332 2 2  3888888875421          112


Q ss_pred             CCccEEEEccccC
Q 022357           85 GKLDILANNAGIA   97 (298)
Q Consensus        85 g~id~lv~nAg~~   97 (298)
                      +++|.++.+++..
T Consensus       133 ~pfD~Iiv~~a~~  145 (224)
T d1vbfa_         133 KPYDRVVVWATAP  145 (224)
T ss_dssp             CCEEEEEESSBBS
T ss_pred             hhHHHHHhhcchh
Confidence            5799999888754

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=83.44  E-value=0.78  Score=38.08  Aligned_cols=34  Identities=24%  Similarity=0.280  Sum_probs=30.3

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEe
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTA   37 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~   37 (298)
                      .+.+++++|-|- |-+|..+|+.|.+.|++|+.++
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            467899999887 8999999999999999998765

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=83.32  E-value=1  Score=34.06  Aligned_cols=77  Identities=22%  Similarity=0.189  Sum_probs=44.9

Q ss_pred             cEEEEeCCCCchhHH--HHHHHHHC----CCEEEEEecCchhhHHHHHHHHhc---CCCCcceeEEEeccCcHHHHHHHH
Q 022357            7 KYAVVTGSNKGIGFE--TVRQLASK----GITVVLTARDEKRGLEAVEKLKAS---GVDPELLLFHQLDISDLASVSSLA   77 (298)
Q Consensus         7 ~~vlITGas~gIG~a--~a~~La~~----G~~Vii~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dls~~~~v~~~~   77 (298)
                      .++.|.|| |.+|..  +...|+..    +.++++.+.++++++.....++..   ....  ..+..     ..+.++++
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~--~~i~~-----~td~~eaL   74 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGAD--LKFEK-----TMNLDDVI   74 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCC--CEEEE-----ESCHHHHH
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCC--eEEEE-----eCChhhcc
Confidence            35777776 666654  44455543    469999999998876655444431   1111  22222     12223333


Q ss_pred             HHHHHhcCCccEEEEccccCC
Q 022357           78 DFIKTQFGKLDILANNAGIAS   98 (298)
Q Consensus        78 ~~~~~~~g~id~lv~nAg~~~   98 (298)
                      +       ..|++|+.++...
T Consensus        75 ~-------dad~Vv~~~~~g~   88 (171)
T d1obba1          75 I-------DADFVINTAMVGG   88 (171)
T ss_dssp             T-------TCSEEEECCCTTH
T ss_pred             c-------CCCeEeeeccccc
Confidence            2       6799999998764

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=83.28  E-value=0.49  Score=37.45  Aligned_cols=32  Identities=25%  Similarity=0.374  Sum_probs=28.3

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      |+|.|| |--|..+|..|+++|++|+++.++..
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            778887 68899999999999999999998754

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=83.20  E-value=5.2  Score=29.74  Aligned_cols=77  Identities=16%  Similarity=0.134  Sum_probs=45.2

Q ss_pred             CCcEEEEeC-CCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            5 TKKYAVVTG-SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         5 ~~~~vlITG-as~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      .++++|=.| |+|.+|    .+.+++|++|+.++.++...+.+.+.++..+...   .+...   +.+.   +.......
T Consensus        41 ~g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~---~v~~~---~~d~---~~~~~~~~  107 (171)
T d1ws6a1          41 RRGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGA---RVVAL---PVEV---FLPEAKAQ  107 (171)
T ss_dssp             TCCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCC---EEECS---CHHH---HHHHHHHT
T ss_pred             CCCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHhhcccc---ceeee---ehhc---cccccccc
Confidence            456666444 455444    4566789999999999887777666666544331   22222   2221   22222233


Q ss_pred             cCCccEEEEcc
Q 022357           84 FGKLDILANNA   94 (298)
Q Consensus        84 ~g~id~lv~nA   94 (298)
                      ..++|+++.+.
T Consensus       108 ~~~fD~If~DP  118 (171)
T d1ws6a1         108 GERFTVAFMAP  118 (171)
T ss_dssp             TCCEEEEEECC
T ss_pred             CCccceeEEcc
Confidence            35799999885

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.15  E-value=0.76  Score=36.25  Aligned_cols=81  Identities=19%  Similarity=0.148  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcC---------------CCCcceeEEEeccCc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASG---------------VDPELLLFHQLDISD   69 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~Dls~   69 (298)
                      .+++||..|++.|   ..+..|+++|++|+.++-++...+...++.....               .....+.++++|+.+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            4679999999888   6788899999999999998876555444432110               011136677777765


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEccccC
Q 022357           70 LASVSSLADFIKTQFGKLDILANNAGIA   97 (298)
Q Consensus        70 ~~~v~~~~~~~~~~~g~id~lv~nAg~~   97 (298)
                      ...         ...+.+|+++......
T Consensus       122 l~~---------~~~~~fd~i~~~~~l~  140 (229)
T d2bzga1         122 LPR---------TNIGKFDMIWDRGALV  140 (229)
T ss_dssp             GGG---------SCCCCEEEEEESSSTT
T ss_pred             ccc---------cccCceeEEEEEEEEE
Confidence            432         1113577777665443

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.99  E-value=1.7  Score=34.28  Aligned_cols=83  Identities=12%  Similarity=-0.013  Sum_probs=58.6

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCC---CcceeEEEeccCcHHHHHHHHHHHH
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVD---PELLLFHQLDISDLASVSSLADFIK   81 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dls~~~~v~~~~~~~~   81 (298)
                      .|.+||-.|+++|--.++..++.....+|+.++++++-.+...+.++..+..   ...+.+...|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            4569999999999888888888888889999999987766666666543211   112666677765321          


Q ss_pred             HhcCCccEEEEccccC
Q 022357           82 TQFGKLDILANNAGIA   97 (298)
Q Consensus        82 ~~~g~id~lv~nAg~~   97 (298)
                      ...+++|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1124799999998754

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=82.95  E-value=0.44  Score=38.59  Aligned_cols=34  Identities=29%  Similarity=0.454  Sum_probs=28.4

Q ss_pred             cEEEEeCCCCchhHHH-----HHHHHHCCCEEEEEecCch
Q 022357            7 KYAVVTGSNKGIGFET-----VRQLASKGITVVLTARDEK   41 (298)
Q Consensus         7 ~~vlITGas~gIG~a~-----a~~La~~G~~Vii~~r~~~   41 (298)
                      |++.|+| -||+|+..     |..|++.|++|.+++-+++
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            6788898 89999864     5588999999999998864

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.73  E-value=0.5  Score=37.02  Aligned_cols=35  Identities=23%  Similarity=0.223  Sum_probs=29.7

Q ss_pred             cEEEEeCCCCchhHH-----HHHHHHHCCCEEEEEecCch
Q 022357            7 KYAVVTGSNKGIGFE-----TVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         7 ~~vlITGas~gIG~a-----~a~~La~~G~~Vii~~r~~~   41 (298)
                      |++.|+++-||.|+.     +|..|+++|.+|.+++-+..
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            789999999999975     56788889999999987643

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=82.62  E-value=3.1  Score=31.45  Aligned_cols=78  Identities=9%  Similarity=0.005  Sum_probs=50.0

Q ss_pred             CCCcEEEEeCCCCchhHHHHHHHHHCCC-EEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHH
Q 022357            4 ATKKYAVVTGSNKGIGFETVRQLASKGI-TVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKT   82 (298)
Q Consensus         4 ~~~~~vlITGas~gIG~a~a~~La~~G~-~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~   82 (298)
                      +.+.++|=.+|++|   ++..+.+++|+ +|+.+..+....+.+.+.+......+  ..++..|+.         +.+..
T Consensus        42 ~~~~~vLDlfaGsG---~~giealsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~--~~ii~~d~~---------~~l~~  107 (183)
T d2fpoa1          42 IVDAQCLDCFAGSG---ALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGN--ARVVNSNAM---------SFLAQ  107 (183)
T ss_dssp             HTTCEEEETTCTTC---HHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCS--EEEECSCHH---------HHHSS
T ss_pred             cchhhhhhhhcccc---ceeeeEEecCcceeEEEEEeechhhHHHHHHhhccccc--eeeeeeccc---------ccccc
Confidence            34566775555555   45556677898 69999999887777776666544333  666766632         22222


Q ss_pred             hcCCccEEEEccc
Q 022357           83 QFGKLDILANNAG   95 (298)
Q Consensus        83 ~~g~id~lv~nAg   95 (298)
                      ...++|+++...-
T Consensus       108 ~~~~fDlIf~DPP  120 (183)
T d2fpoa1         108 KGTPHNIVFVDPP  120 (183)
T ss_dssp             CCCCEEEEEECCS
T ss_pred             cccccCEEEEcCc
Confidence            3347899999864

>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: MrsD
species: Bacillus sp. hil-y85/54728 [TaxId: 69002]

Probab=82.56  E-value=0.47  Score=36.67  Aligned_cols=37  Identities=14%  Similarity=0.088  Sum_probs=24.8

Q ss_pred             CCcCCCcEEE--EeCCCCchh-HHHHHHHHHCCCEEEEEe
Q 022357            1 MAEATKKYAV--VTGSNKGIG-FETVRQLASKGITVVLTA   37 (298)
Q Consensus         1 m~~~~~~~vl--ITGas~gIG-~a~a~~La~~G~~Vii~~   37 (298)
                      |++++||+++  |||+.+-++ ..++++|-++|++|.++-
T Consensus         1 ms~l~~KkIllgvTGsiaa~k~~~l~~~L~~~g~eV~vv~   40 (183)
T d1p3y1_           1 ISILKDKKLLIGICGSISSVGISSYLLYFKSFFKEIRVVM   40 (183)
T ss_dssp             CTTGGGCEEEEEECSCGGGGGTHHHHHHHTTTSSEEEEEE
T ss_pred             CCCcCCCEEEEEEeCHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence            8899998755  444433332 367777878899886543

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=82.06  E-value=2.6  Score=32.80  Aligned_cols=77  Identities=14%  Similarity=0.109  Sum_probs=55.9

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhc
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQF   84 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~   84 (298)
                      .+.+||=.|++.|   .++..|++++.+|+.++-++.-++...+..+..+..+  +.+++.|+.+..- .         .
T Consensus        16 ~~~rILDiGcGtG---~~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~--~~~~~~d~~~~~~-~---------~   80 (234)
T d1xxla_          16 AEHRVLDIGAGAG---HTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVEN--VRFQQGTAESLPF-P---------D   80 (234)
T ss_dssp             TTCEEEEESCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCS--EEEEECBTTBCCS-C---------T
T ss_pred             CCCEEEEeCCcCc---HHHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccc--ccccccccccccc-c---------c
Confidence            4678999999888   5667788889999999999877666666665544333  8888888876430 0         1


Q ss_pred             CCccEEEEcccc
Q 022357           85 GKLDILANNAGI   96 (298)
Q Consensus        85 g~id~lv~nAg~   96 (298)
                      +.+|+++++-.+
T Consensus        81 ~~fD~v~~~~~l   92 (234)
T d1xxla_          81 DSFDIITCRYAA   92 (234)
T ss_dssp             TCEEEEEEESCG
T ss_pred             cccceeeeecee
Confidence            479988887554

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.61  E-value=0.6  Score=38.31  Aligned_cols=31  Identities=32%  Similarity=0.575  Sum_probs=27.7

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            9 AVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         9 vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      |||.|| |..|...|.+|+++|++|+++.+..
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            788887 8899999999999999999998753

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=81.58  E-value=1.8  Score=31.10  Aligned_cols=81  Identities=12%  Similarity=0.160  Sum_probs=51.6

Q ss_pred             CCcC-CCcEEEEeCCCC----------chhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCc
Q 022357            1 MAEA-TKKYAVVTGSNK----------GIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISD   69 (298)
Q Consensus         1 m~~~-~~~~vlITGas~----------gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~   69 (298)
                      |+.. ..|++||.|++.          --+.+.++.|.+.|++++++..|++...--.    ..   ..++.+.++   .
T Consensus         1 mp~~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~----d~---aD~lYfePl---t   70 (127)
T d1a9xa3           1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP----EM---ADATYIEPI---H   70 (127)
T ss_dssp             CCCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG----GG---SSEEECSCC---C
T ss_pred             CCCCCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh----hh---cceeeeecC---C
Confidence            4443 347899999742          2467888999999999999999886421110    00   112444443   4


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEcccc
Q 022357           70 LASVSSLADFIKTQFGKLDILANNAGI   96 (298)
Q Consensus        70 ~~~v~~~~~~~~~~~g~id~lv~nAg~   96 (298)
                      .+.+.++++.-     ++|.++.-.|.
T Consensus        71 ~e~v~~Ii~~E-----~pd~il~~~GG   92 (127)
T d1a9xa3          71 WEVVRKIIEKE-----RPDAVLPTMGG   92 (127)
T ss_dssp             HHHHHHHHHHH-----CCSEEECSSSH
T ss_pred             HHHHHHHHHHh-----CcCCeEEEeee
Confidence            56666666543     78988877663

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=80.93  E-value=1.1  Score=34.44  Aligned_cols=38  Identities=26%  Similarity=0.178  Sum_probs=32.7

Q ss_pred             cCCCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            3 EATKKYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         3 ~~~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      .+.++++.|.|. |.||+.+++.+...|++|+..++...
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          41 EARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccceEEEEeec-ccchhhhhhhcccccceEeecccccc
Confidence            367889999865 99999999999999999999987643

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=80.84  E-value=0.55  Score=37.38  Aligned_cols=32  Identities=25%  Similarity=0.346  Sum_probs=28.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEecCc
Q 022357            8 YAVVTGSNKGIGFETVRQLASKGITVVLTARDE   40 (298)
Q Consensus         8 ~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~   40 (298)
                      .|+|.|| |--|...|.+|+++|++|+++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            4788888 7789999999999999999998764

>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.48  E-value=4.6  Score=35.89  Aligned_cols=74  Identities=11%  Similarity=0.127  Sum_probs=52.8

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHC-CCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHh
Q 022357            7 KYAVVTGSNKGIGFETVRQLASK-GITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQ   83 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~-G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~   83 (298)
                      +..++++.||.-|.|.+..+... +.+|++++-+..--.--..++.....++  ++.+.+| .+.++++.+++++...
T Consensus       152 ~~~il~aTSGDTG~Aa~~af~~~~~i~v~vlyP~~~vS~iQ~~Qmtt~~~~N--v~~i~v~-G~fDDcq~~vk~~f~d  226 (511)
T d1kl7a_         152 QITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDEN--VQTLSVT-GTFDNCQDIVKAIFGD  226 (511)
T ss_dssp             CEEEEEECSSSHHHHHHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTT--EEEEEES-SCHHHHHHHHHHHHHC
T ss_pred             eEEEEEecCCCccHHHHHHhcCCCCceeEEeccCCCCchHHHHHHhhcCCce--EEEEEec-cChHHHHHHHHHHHhh
Confidence            45566666788999999999854 7789998876542233334455544444  8899988 5789999999888753

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=80.04  E-value=3.6  Score=33.45  Aligned_cols=77  Identities=9%  Similarity=0.033  Sum_probs=52.9

Q ss_pred             cEEEEeC-CCCchhHHHHHHHHHCCCEEEEEecCchhhHHHHHHHHhcCCCCcceeEEEeccCcHHHHHHHHHHHHHhcC
Q 022357            7 KYAVVTG-SNKGIGFETVRQLASKGITVVLTARDEKRGLEAVEKLKASGVDPELLLFHQLDISDLASVSSLADFIKTQFG   85 (298)
Q Consensus         7 ~~vlITG-as~gIG~a~a~~La~~G~~Vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~g   85 (298)
                      .++|=.| |||-||.+++.++  ...+|+.++.++..++-..+..+..+.++  +.+++.|+-+.-.           ..
T Consensus       110 ~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~--v~~~~~d~~~~~~-----------~~  174 (274)
T d2b3ta1         110 CRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKN--IHILQSDWFSALA-----------GQ  174 (274)
T ss_dssp             CEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCS--EEEECCSTTGGGT-----------TC
T ss_pred             cceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCccc--ceeeecccccccC-----------CC
Confidence            3455555 5566666666543  36799999999887777666666555433  8899999865421           14


Q ss_pred             CccEEEEccccCC
Q 022357           86 KLDILANNAGIAS   98 (298)
Q Consensus        86 ~id~lv~nAg~~~   98 (298)
                      ++|++|+|.-+.+
T Consensus       175 ~fDlIvsNPPYi~  187 (274)
T d2b3ta1         175 QFAMIVSNPPYID  187 (274)
T ss_dssp             CEEEEEECCCCBC
T ss_pred             ceeEEEecchhhh
Confidence            8999999987654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.03  E-value=0.93  Score=36.52  Aligned_cols=34  Identities=29%  Similarity=0.384  Sum_probs=28.3

Q ss_pred             CCcEEEEeCCCCchhHHHHHHHHHCCCEEEEEecC
Q 022357            5 TKKYAVVTGSNKGIGFETVRQLASKGITVVLTARD   39 (298)
Q Consensus         5 ~~~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~   39 (298)
                      +.++|+|.|| |-=|...|.+|+++|++|.++-++
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            3456889888 677899999999999999998654

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=80.02  E-value=0.94  Score=29.70  Aligned_cols=34  Identities=24%  Similarity=0.189  Sum_probs=30.4

Q ss_pred             cEEEEeCCCCchhHHHHHHHHHCCCEEEEEecCch
Q 022357            7 KYAVVTGSNKGIGFETVRQLASKGITVVLTARDEK   41 (298)
Q Consensus         7 ~~vlITGas~gIG~a~a~~La~~G~~Vii~~r~~~   41 (298)
                      |++.|.|| |.+|+-++..-.+-|.+|++.+.+.+
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            68889988 89999999999999999999997754

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.01  E-value=5.5  Score=30.75  Aligned_cols=89  Identities=13%  Similarity=0.012  Sum_probs=57.6

Q ss_pred             CcEEEEeCCCCchhHH-----HHHHHHHC-----CCEEEEEecCchhhHHHHHHHHhcCCC-----------CcceeEEE
Q 022357            6 KKYAVVTGSNKGIGFE-----TVRQLASK-----GITVVLTARDEKRGLEAVEKLKASGVD-----------PELLLFHQ   64 (298)
Q Consensus         6 ~~~vlITGas~gIG~a-----~a~~La~~-----G~~Vii~~r~~~~~~~~~~~~~~~~~~-----------~~~~~~~~   64 (298)
                      .-+.+|.||||.+.+-     +- +|...     +.+|+.++|++-..++..+.+......           ..++.++.
T Consensus        20 ~~t~VIFGatGDLA~RKL~PALf-~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~   98 (203)
T d1qkia1          20 THIFIIMGASGDLAKKKIYPTIW-WLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVA   98 (203)
T ss_dssp             CEEEEEETTTSHHHHHTHHHHHH-HHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCB
T ss_pred             CcEEEEECcccHHHHhHHHHHHH-HHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhcccc
Confidence            4579999999998753     32 23333     467999999876655555444332111           13588889


Q ss_pred             eccCcHHHHHHHHHHHHHhc-C-CccEEEEccc
Q 022357           65 LDISDLASVSSLADFIKTQF-G-KLDILANNAG   95 (298)
Q Consensus        65 ~Dls~~~~v~~~~~~~~~~~-g-~id~lv~nAg   95 (298)
                      +|.++.++.+++.+.+.+.. + .-+.+++-|-
T Consensus        99 ~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLAv  131 (203)
T d1qkia1          99 GQYDDAASYQRLNSHMNALHLGSQANRLFYLAL  131 (203)
T ss_dssp             CCTTCHHHHHHHHHHHHHTTTTTTSEEEEEECS
T ss_pred             CcCCChhhHHHHHHHHHHHhcCCCcceEEEEec
Confidence            99999999888877665432 2 3346666653