Query 022360
Match_columns 298
No_of_seqs 117 out of 1149
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 02:56:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022360.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022360hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3109 Haloacid dehalogenase- 100.0 3.5E-30 7.5E-35 219.3 18.9 231 1-279 1-234 (244)
2 TIGR01993 Pyr-5-nucltdase pyri 99.9 6.4E-26 1.4E-30 193.9 19.9 184 15-249 1-184 (184)
3 PRK13288 pyrophosphatase PpaX; 99.9 7.2E-26 1.6E-30 198.1 16.7 199 12-274 1-212 (214)
4 PLN02770 haloacid dehalogenase 99.9 2.1E-25 4.6E-30 199.9 17.4 199 11-269 19-232 (248)
5 COG0546 Gph Predicted phosphat 99.9 4.5E-25 9.8E-30 194.4 16.6 199 12-273 2-218 (220)
6 TIGR03351 PhnX-like phosphonat 99.9 2.1E-24 4.6E-29 189.3 19.4 196 14-272 1-219 (220)
7 PRK13226 phosphoglycolate phos 99.9 6.6E-25 1.4E-29 194.4 15.7 196 13-272 11-224 (229)
8 PRK10826 2-deoxyglucose-6-phos 99.9 8.5E-25 1.8E-29 192.5 15.3 198 9-270 2-217 (222)
9 TIGR02253 CTE7 HAD superfamily 99.9 2.6E-24 5.7E-29 188.6 17.9 198 14-268 2-220 (221)
10 PRK13478 phosphonoacetaldehyde 99.9 3.3E-24 7.3E-29 194.0 19.0 202 11-277 1-259 (267)
11 TIGR01422 phosphonatase phosph 99.9 3.4E-24 7.4E-29 192.3 18.4 194 14-272 2-252 (253)
12 PRK10563 6-phosphogluconate ph 99.9 8.6E-25 1.9E-29 192.1 14.2 198 12-272 2-212 (221)
13 PLN03243 haloacid dehalogenase 99.9 2.3E-24 5E-29 194.5 16.2 204 12-278 22-240 (260)
14 TIGR01454 AHBA_synth_RP 3-amin 99.9 5.8E-24 1.3E-28 184.8 17.5 193 17-273 1-204 (205)
15 PRK11587 putative phosphatase; 99.9 7.9E-24 1.7E-28 186.0 17.8 192 12-269 1-204 (218)
16 TIGR01449 PGP_bact 2-phosphogl 99.9 5E-24 1.1E-28 185.7 16.3 191 17-271 1-212 (213)
17 PLN02575 haloacid dehalogenase 99.9 6.7E-24 1.5E-28 199.2 17.6 210 13-286 130-355 (381)
18 PRK13222 phosphoglycolate phos 99.9 2E-23 4.3E-28 183.4 18.5 202 9-274 1-223 (226)
19 TIGR02254 YjjG/YfnB HAD superf 99.9 2.4E-23 5.2E-28 182.5 17.2 199 14-272 1-224 (224)
20 PRK13225 phosphoglycolate phos 99.9 5.7E-23 1.2E-27 186.6 19.7 197 13-277 61-272 (273)
21 PRK14988 GMP/IMP nucleotidase; 99.9 5.9E-23 1.3E-27 181.5 19.3 202 13-276 9-222 (224)
22 PRK09449 dUMP phosphatase; Pro 99.9 9.1E-23 2E-27 179.5 19.9 123 97-273 93-223 (224)
23 PRK13223 phosphoglycolate phos 99.9 1.9E-22 4.1E-27 183.3 19.0 199 13-274 12-231 (272)
24 COG1011 Predicted hydrolase (H 99.9 8.1E-23 1.7E-27 179.7 15.5 124 97-274 97-228 (229)
25 COG0637 Predicted phosphatase/ 99.9 5.7E-23 1.2E-27 181.2 14.1 196 13-272 1-216 (221)
26 PRK10725 fructose-1-P/6-phosph 99.9 4.9E-23 1.1E-27 176.2 13.1 174 12-250 3-186 (188)
27 PLN02940 riboflavin kinase 99.9 9.3E-23 2E-27 193.5 14.6 194 13-270 10-218 (382)
28 PRK10748 flavin mononucleotide 99.9 1.2E-21 2.5E-26 174.7 19.1 200 12-272 8-238 (238)
29 PRK06698 bifunctional 5'-methy 99.9 3.1E-22 6.8E-27 194.4 15.2 205 9-275 236-456 (459)
30 TIGR01428 HAD_type_II 2-haloal 99.9 9E-22 1.9E-26 170.0 15.7 104 96-253 89-195 (198)
31 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 2.3E-21 4.9E-26 165.2 15.1 170 14-249 1-185 (185)
32 PLN02779 haloacid dehalogenase 99.9 2.6E-21 5.7E-26 176.9 16.5 199 12-270 38-270 (286)
33 TIGR01990 bPGM beta-phosphoglu 99.9 1.8E-21 3.9E-26 165.8 11.5 169 16-250 1-185 (185)
34 TIGR02252 DREG-2 REG-2-like, H 99.9 1.3E-20 2.9E-25 163.2 17.0 174 15-248 1-203 (203)
35 PF13419 HAD_2: Haloacid dehal 99.8 1.5E-21 3.3E-26 163.0 7.5 168 17-249 1-176 (176)
36 TIGR01509 HAD-SF-IA-v3 haloaci 99.8 8.3E-21 1.8E-25 161.0 9.4 97 98-249 84-183 (183)
37 PHA02597 30.2 hypothetical pro 99.8 8.4E-20 1.8E-24 157.7 13.3 183 14-269 2-195 (197)
38 PLN02919 haloacid dehalogenase 99.8 1.7E-19 3.6E-24 189.9 17.7 193 12-268 73-285 (1057)
39 TIGR00338 serB phosphoserine p 99.8 2.2E-19 4.7E-24 157.4 14.7 199 10-270 10-217 (219)
40 TIGR02247 HAD-1A3-hyp Epoxide 99.8 2.4E-19 5.2E-24 156.4 14.5 101 97-251 92-197 (211)
41 PRK09456 ?-D-glucose-1-phospha 99.8 1E-18 2.3E-23 151.3 16.4 119 76-252 65-187 (199)
42 TIGR01493 HAD-SF-IA-v2 Haloaci 99.8 1.9E-19 4.2E-24 152.3 10.9 89 96-242 87-175 (175)
43 TIGR01548 HAD-SF-IA-hyp1 haloa 99.8 1.2E-18 2.7E-23 150.5 13.9 88 100-242 107-197 (197)
44 TIGR01549 HAD-SF-IA-v1 haloaci 99.8 2.7E-18 5.9E-23 142.3 13.8 151 16-243 1-154 (154)
45 PLN02811 hydrolase 99.8 4.4E-18 9.5E-23 149.7 12.8 184 21-269 1-207 (220)
46 PLN02954 phosphoserine phospha 99.8 2.7E-17 5.8E-22 144.6 17.5 201 12-272 10-223 (224)
47 PRK08942 D,D-heptose 1,7-bisph 99.8 1.1E-17 2.4E-22 142.9 13.9 125 98-273 28-177 (181)
48 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.7 3.7E-17 8E-22 140.9 15.1 112 98-253 79-193 (201)
49 PRK11133 serB phosphoserine ph 99.7 3.5E-17 7.6E-22 151.8 15.6 129 97-270 179-310 (322)
50 PRK13582 thrH phosphoserine ph 99.7 2.1E-17 4.7E-22 143.2 13.2 196 14-279 1-202 (205)
51 PRK06769 hypothetical protein; 99.7 2.8E-17 6E-22 139.7 11.6 121 98-272 27-171 (173)
52 TIGR00213 GmhB_yaeD D,D-heptos 99.7 4.8E-17 1E-21 138.4 12.6 127 98-269 25-175 (176)
53 KOG3085 Predicted hydrolase (H 99.7 1.6E-16 3.5E-21 139.8 13.5 102 97-253 111-216 (237)
54 PRK09552 mtnX 2-hydroxy-3-keto 99.7 9.9E-17 2.1E-21 141.1 11.4 125 97-277 72-217 (219)
55 TIGR01656 Histidinol-ppas hist 99.7 7.7E-17 1.7E-21 133.2 7.7 99 99-252 27-147 (147)
56 KOG2914 Predicted haloacid-hal 99.7 7.9E-16 1.7E-20 134.8 12.8 194 12-267 8-217 (222)
57 TIGR01691 enolase-ppase 2,3-di 99.7 4.9E-15 1.1E-19 130.4 16.7 102 96-253 92-199 (220)
58 TIGR01662 HAD-SF-IIIA HAD-supe 99.6 1.4E-15 3E-20 123.1 11.3 94 99-250 25-131 (132)
59 TIGR01685 MDP-1 magnesium-depe 99.6 1.2E-16 2.7E-21 135.4 4.0 104 96-253 42-160 (174)
60 TIGR02137 HSK-PSP phosphoserin 99.6 4.9E-15 1.1E-19 129.0 12.9 193 15-275 2-198 (203)
61 COG0560 SerB Phosphoserine pho 99.6 4.6E-15 1E-19 130.0 11.9 194 13-265 4-202 (212)
62 TIGR01261 hisB_Nterm histidino 99.6 2E-15 4.3E-20 126.8 8.5 100 98-253 28-150 (161)
63 TIGR01672 AphA HAD superfamily 99.6 1.3E-14 2.9E-19 128.9 14.1 97 97-254 112-215 (237)
64 cd01427 HAD_like Haloacid deha 99.6 5.2E-15 1.1E-19 117.9 9.2 116 96-249 21-139 (139)
65 TIGR02726 phenyl_P_delta pheny 99.6 3E-15 6.5E-20 126.6 7.4 110 105-277 43-156 (169)
66 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 6.3E-15 1.4E-19 124.4 9.3 93 100-248 43-160 (166)
67 TIGR01489 DKMTPPase-SF 2,3-dik 99.6 4.3E-14 9.2E-19 120.3 14.6 112 98-246 71-185 (188)
68 TIGR01670 YrbI-phosphatas 3-de 99.6 4.4E-15 9.5E-20 123.8 6.9 113 104-279 36-152 (154)
69 PRK01158 phosphoglycolate phos 99.6 7.5E-15 1.6E-19 129.5 7.4 72 205-276 155-229 (230)
70 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.5 8.4E-15 1.8E-19 132.1 7.6 68 205-272 178-254 (257)
71 TIGR03333 salvage_mtnX 2-hydro 99.5 5.6E-14 1.2E-18 123.2 10.6 126 98-277 69-213 (214)
72 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.5 8E-13 1.7E-17 114.2 17.1 110 98-250 86-198 (202)
73 TIGR01488 HAD-SF-IB Haloacid D 99.5 9.4E-14 2E-18 117.3 10.2 102 98-242 72-177 (177)
74 PRK10530 pyridoxal phosphate ( 99.5 6.1E-14 1.3E-18 126.6 8.0 72 205-276 197-271 (272)
75 TIGR01668 YqeG_hyp_ppase HAD s 99.5 6.6E-13 1.4E-17 112.4 13.8 93 99-254 43-140 (170)
76 PRK09484 3-deoxy-D-manno-octul 99.5 8E-14 1.7E-18 119.5 7.9 105 106-274 58-170 (183)
77 PRK05446 imidazole glycerol-ph 99.5 5.3E-13 1.2E-17 124.9 13.8 112 97-273 28-162 (354)
78 PRK10513 sugar phosphate phosp 99.5 4.8E-14 1E-18 127.5 6.3 72 205-276 194-268 (270)
79 PRK10444 UMP phosphatase; Prov 99.5 3E-13 6.5E-18 121.3 11.1 64 205-268 173-245 (248)
80 PLN02645 phosphoglycolate phos 99.5 3.4E-12 7.5E-17 118.2 18.5 69 205-273 229-308 (311)
81 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.5 2.3E-12 4.9E-17 115.7 16.7 64 205-268 177-249 (249)
82 PRK10976 putative hydrolase; P 99.5 1.6E-13 3.4E-18 123.9 7.8 72 205-276 188-264 (266)
83 PRK15126 thiamin pyrimidine py 99.4 5.5E-14 1.2E-18 127.4 4.3 73 205-277 186-263 (272)
84 TIGR01452 PGP_euk phosphoglyco 99.4 1.7E-12 3.7E-17 118.4 14.2 64 205-268 201-279 (279)
85 TIGR01681 HAD-SF-IIIC HAD-supe 99.4 4.3E-13 9.3E-18 108.4 8.1 85 99-241 29-126 (128)
86 PRK11009 aphA acid phosphatase 99.4 2E-12 4.4E-17 114.9 12.7 96 96-254 111-215 (237)
87 COG0647 NagD Predicted sugar p 99.4 9E-12 1.9E-16 112.3 17.0 229 10-275 4-268 (269)
88 smart00577 CPDc catalytic doma 99.4 8.6E-14 1.9E-18 115.2 3.1 93 97-246 43-138 (148)
89 TIGR01482 SPP-subfamily Sucros 99.4 2.5E-13 5.4E-18 119.2 5.7 70 205-274 147-223 (225)
90 PHA02530 pseT polynucleotide k 99.4 1.5E-12 3.1E-17 119.7 11.0 109 98-253 186-299 (300)
91 COG0561 Cof Predicted hydrolas 99.4 6.2E-13 1.3E-17 119.9 8.2 73 205-277 187-262 (264)
92 PF00702 Hydrolase: haloacid d 99.4 4E-13 8.8E-18 116.3 5.3 87 98-243 126-215 (215)
93 PLN02887 hydrolase family prot 99.4 6.6E-13 1.4E-17 131.6 6.9 72 205-276 505-579 (580)
94 PRK00192 mannosyl-3-phosphogly 99.4 3E-12 6.6E-17 116.3 9.6 72 205-277 189-271 (273)
95 TIGR01487 SPP-like sucrose-pho 99.3 4.7E-13 1E-17 117.2 3.8 62 205-266 145-207 (215)
96 COG2179 Predicted hydrolase of 99.3 8.2E-12 1.8E-16 103.1 10.0 81 108-251 58-139 (175)
97 PF13242 Hydrolase_like: HAD-h 99.3 5.1E-12 1.1E-16 92.4 7.8 65 204-268 2-75 (75)
98 TIGR01456 CECR5 HAD-superfamil 99.3 1.2E-10 2.5E-15 108.4 17.1 68 205-272 232-320 (321)
99 PRK03669 mannosyl-3-phosphogly 99.3 1E-11 2.2E-16 112.7 8.6 73 205-277 185-269 (271)
100 PF06888 Put_Phosphatase: Puta 99.2 3.9E-10 8.6E-15 99.8 16.1 156 80-275 58-233 (234)
101 PRK11590 hypothetical protein; 99.2 1.3E-10 2.9E-15 101.6 13.0 103 98-247 94-200 (211)
102 KOG2882 p-Nitrophenyl phosphat 99.2 1.5E-10 3.2E-15 104.2 11.9 68 205-272 223-303 (306)
103 KOG1615 Phosphoserine phosphat 99.2 1.4E-10 3.1E-15 97.9 10.8 126 96-268 85-221 (227)
104 TIGR01686 FkbH FkbH-like domai 99.2 9.3E-11 2E-15 109.0 8.3 87 100-245 32-125 (320)
105 TIGR02463 MPGP_rel mannosyl-3- 99.1 1.1E-10 2.4E-15 102.4 8.0 44 205-248 177-220 (221)
106 TIGR00099 Cof-subfamily Cof su 99.1 6.9E-11 1.5E-15 106.1 5.9 63 205-267 186-249 (256)
107 TIGR02244 HAD-IG-Ncltidse HAD 99.1 3.9E-09 8.4E-14 98.4 16.8 129 97-251 182-324 (343)
108 COG0241 HisB Histidinol phosph 99.1 2.5E-09 5.4E-14 90.8 13.5 68 204-271 103-175 (181)
109 TIGR01544 HAD-SF-IE haloacid d 99.1 1.6E-09 3.5E-14 98.1 12.9 118 77-242 103-230 (277)
110 COG1778 Low specificity phosph 99.1 7.5E-11 1.6E-15 96.4 2.7 97 105-264 44-141 (170)
111 KOG3120 Predicted haloacid deh 99.0 5.1E-09 1.1E-13 90.2 13.6 164 81-283 72-254 (256)
112 TIGR01460 HAD-SF-IIA Haloacid 99.0 4.1E-09 8.8E-14 93.9 13.6 48 205-252 187-236 (236)
113 TIGR01663 PNK-3'Pase polynucle 99.0 1.5E-09 3.3E-14 106.5 11.5 89 100-244 198-305 (526)
114 PRK08238 hypothetical protein; 99.0 5.5E-09 1.2E-13 101.9 15.2 96 97-253 70-168 (479)
115 TIGR01486 HAD-SF-IIB-MPGP mann 99.0 6.1E-10 1.3E-14 100.1 7.7 71 205-275 174-255 (256)
116 PF08282 Hydrolase_3: haloacid 99.0 4.1E-11 8.9E-16 105.6 -0.3 63 205-267 184-247 (254)
117 TIGR02471 sucr_syn_bact_C sucr 98.9 2.1E-09 4.5E-14 95.4 7.4 70 205-274 157-233 (236)
118 TIGR01545 YfhB_g-proteo haloac 98.9 6E-08 1.3E-12 84.9 16.3 104 98-248 93-200 (210)
119 COG4359 Uncharacterized conser 98.9 1.8E-08 4E-13 84.5 11.3 140 96-277 70-216 (220)
120 PRK14502 bifunctional mannosyl 98.9 5.9E-09 1.3E-13 104.0 8.1 48 205-252 611-660 (694)
121 PF12689 Acid_PPase: Acid Phos 98.9 1.3E-09 2.8E-14 91.9 2.8 99 96-253 42-154 (169)
122 PTZ00445 p36-lilke protein; Pr 98.8 1.3E-08 2.8E-13 87.9 8.8 49 205-253 156-208 (219)
123 TIGR01485 SPP_plant-cyano sucr 98.8 1.9E-08 4.1E-13 90.1 10.2 48 205-252 165-212 (249)
124 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.8 2.9E-08 6.3E-13 88.6 10.8 87 99-244 24-116 (242)
125 TIGR01533 lipo_e_P4 5'-nucleot 98.8 4.7E-08 1E-12 88.4 11.3 83 97-240 116-205 (266)
126 COG4229 Predicted enolase-phos 98.8 1.3E-07 2.8E-12 79.4 12.9 102 97-254 101-208 (229)
127 PF12710 HAD: haloacid dehalog 98.8 6.8E-08 1.5E-12 82.2 11.5 95 102-240 92-192 (192)
128 KOG3040 Predicted sugar phosph 98.8 5.6E-09 1.2E-13 89.3 3.5 69 205-273 180-257 (262)
129 PRK10187 trehalose-6-phosphate 98.7 1.4E-07 3E-12 85.6 12.1 70 205-277 172-245 (266)
130 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.7 9.8E-09 2.1E-13 91.6 3.6 46 205-250 194-241 (242)
131 PF09419 PGP_phosphatase: Mito 98.7 1.5E-07 3.2E-12 79.3 10.0 45 206-252 116-166 (168)
132 TIGR02461 osmo_MPG_phos mannos 98.6 3.7E-08 8E-13 87.1 4.8 43 205-247 179-223 (225)
133 TIGR01512 ATPase-IB2_Cd heavy 98.6 1E-07 2.2E-12 94.8 7.7 110 98-272 361-478 (536)
134 TIGR01525 ATPase-IB_hvy heavy 98.6 1.7E-07 3.7E-12 93.5 8.1 110 98-272 383-499 (556)
135 TIGR01511 ATPase-IB1_Cu copper 98.5 3.9E-07 8.4E-12 91.1 8.5 109 98-272 404-518 (562)
136 PLN02423 phosphomannomutase 98.4 2.7E-06 5.9E-11 76.2 10.0 54 205-276 187-244 (245)
137 PTZ00174 phosphomannomutase; P 98.4 5.2E-07 1.1E-11 80.8 5.2 42 205-250 186-231 (247)
138 TIGR02251 HIF-SF_euk Dullard-l 98.3 3.8E-07 8.3E-12 76.6 2.5 95 98-249 41-138 (162)
139 TIGR01522 ATPase-IIA2_Ca golgi 98.3 3.5E-06 7.7E-11 88.4 9.8 137 99-273 528-671 (884)
140 PF08645 PNK3P: Polynucleotide 98.2 1.7E-06 3.8E-11 72.4 5.6 43 205-247 96-153 (159)
141 PRK12702 mannosyl-3-phosphogly 98.2 1.9E-06 4.1E-11 78.5 5.7 43 206-248 207-251 (302)
142 TIGR01684 viral_ppase viral ph 98.2 4.2E-06 9.2E-11 76.1 7.7 49 102-150 149-200 (301)
143 TIGR00685 T6PP trehalose-phosp 98.2 4.9E-06 1.1E-10 74.4 8.0 71 206-276 166-243 (244)
144 PF05116 S6PP: Sucrose-6F-phos 98.2 4.2E-06 9.2E-11 75.1 7.4 47 205-252 163-209 (247)
145 COG4087 Soluble P-type ATPase 98.2 1.3E-05 2.8E-10 63.9 9.0 116 97-275 28-149 (152)
146 COG4996 Predicted phosphatase 98.1 4E-06 8.6E-11 66.8 5.5 48 97-144 39-89 (164)
147 PRK10671 copA copper exporting 98.1 9.3E-06 2E-10 84.8 9.3 110 99-273 650-765 (834)
148 PF06941 NT5C: 5' nucleotidase 98.1 2.5E-05 5.3E-10 67.2 9.6 46 227-272 139-185 (191)
149 PF05761 5_nucleotid: 5' nucle 98.1 2.5E-05 5.5E-10 75.6 10.1 129 98-252 182-326 (448)
150 PLN02177 glycerol-3-phosphate 98.0 0.00014 3E-09 71.5 14.9 102 100-248 111-213 (497)
151 PHA03398 viral phosphatase sup 98.0 4.9E-05 1.1E-09 69.3 9.4 48 102-149 151-201 (303)
152 TIGR01116 ATPase-IIA1_Ca sarco 97.8 6.7E-05 1.4E-09 79.2 9.4 136 99-272 537-682 (917)
153 PRK11033 zntA zinc/cadmium/mer 97.7 0.00013 2.7E-09 75.4 9.3 107 99-272 568-680 (741)
154 TIGR01675 plant-AP plant acid 97.7 0.00041 9E-09 61.4 10.9 48 96-144 117-170 (229)
155 COG4030 Uncharacterized protei 97.7 0.0013 2.9E-08 57.5 13.6 150 97-265 81-252 (315)
156 TIGR01484 HAD-SF-IIB HAD-super 97.6 4.6E-05 1E-09 65.8 3.7 44 205-248 161-204 (204)
157 PRK14010 potassium-transportin 97.6 0.00021 4.7E-09 72.6 8.9 109 99-272 441-555 (673)
158 PF03767 Acid_phosphat_B: HAD 97.6 0.0001 2.2E-09 65.4 5.2 39 99-137 115-159 (229)
159 TIGR01497 kdpB K+-transporting 97.6 0.0002 4.4E-09 72.7 7.8 109 99-272 446-560 (675)
160 COG2503 Predicted secreted aci 97.5 0.00055 1.2E-08 60.3 8.7 58 77-138 104-168 (274)
161 TIGR01524 ATPase-IIIB_Mg magne 97.5 0.00048 1E-08 72.3 9.7 134 99-272 515-654 (867)
162 PRK01122 potassium-transportin 97.5 0.00046 1E-08 70.3 9.1 109 99-272 445-559 (679)
163 PRK10517 magnesium-transportin 97.5 0.00036 7.9E-09 73.5 8.4 134 99-272 550-689 (902)
164 PF11019 DUF2608: Protein of u 97.5 0.0043 9.3E-08 55.9 14.2 50 205-254 160-213 (252)
165 COG2217 ZntA Cation transport 97.5 0.00036 7.7E-09 71.3 7.9 109 99-272 537-651 (713)
166 PF13344 Hydrolase_6: Haloacid 97.4 0.00079 1.7E-08 51.9 7.2 47 100-146 15-67 (101)
167 PF03031 NIF: NLI interacting 97.3 3.8E-05 8.3E-10 63.8 -0.6 51 98-148 35-88 (159)
168 TIGR01517 ATPase-IIB_Ca plasma 97.3 0.00082 1.8E-08 71.3 8.4 136 99-272 579-721 (941)
169 PRK15122 magnesium-transportin 97.3 0.00073 1.6E-08 71.3 8.0 134 99-272 550-689 (903)
170 smart00775 LNS2 LNS2 domain. T 97.2 0.0045 9.7E-08 51.7 11.0 39 208-246 103-142 (157)
171 TIGR01523 ATPase-IID_K-Na pota 97.2 0.0013 2.9E-08 70.4 9.0 136 99-272 646-798 (1053)
172 COG0474 MgtA Cation transport 97.1 0.0019 4.1E-08 68.3 9.1 128 99-264 547-681 (917)
173 PLN02382 probable sucrose-phos 97.1 0.00053 1.1E-08 66.1 4.6 72 205-276 173-260 (413)
174 TIGR01647 ATPase-IIIA_H plasma 97.1 0.0013 2.8E-08 68.1 7.7 137 99-270 442-584 (755)
175 PRK14501 putative bifunctional 97.0 0.0016 3.4E-08 67.3 7.1 70 205-276 655-724 (726)
176 COG3700 AphA Acid phosphatase 96.9 0.0041 8.9E-08 52.5 7.7 26 226-251 187-212 (237)
177 TIGR01680 Veg_Stor_Prot vegeta 96.9 0.0075 1.6E-07 54.5 9.9 42 96-137 142-189 (275)
178 TIGR01106 ATPase-IIC_X-K sodiu 96.9 0.0032 6.9E-08 67.2 8.8 138 99-272 568-736 (997)
179 PLN02499 glycerol-3-phosphate 96.8 0.051 1.1E-06 53.2 15.4 37 101-138 98-135 (498)
180 TIGR02250 FCP1_euk FCP1-like p 96.5 0.0055 1.2E-07 51.1 5.8 51 97-147 56-110 (156)
181 PLN02580 trehalose-phosphatase 96.5 0.01 2.2E-07 56.5 8.2 71 206-277 300-378 (384)
182 KOG0202 Ca2+ transporting ATPa 96.4 0.0069 1.5E-07 61.9 6.7 131 99-264 584-720 (972)
183 KOG0207 Cation transport ATPas 96.4 0.017 3.7E-07 59.6 9.1 97 103-264 730-827 (951)
184 PF05152 DUF705: Protein of un 96.3 0.032 7E-07 50.6 9.3 40 108-147 154-193 (297)
185 PLN02645 phosphoglycolate phos 96.1 0.027 5.7E-07 52.2 8.4 88 98-248 43-136 (311)
186 PLN02205 alpha,alpha-trehalose 96.1 0.016 3.4E-07 60.8 7.4 74 205-278 760-847 (854)
187 COG5663 Uncharacterized conser 96.0 0.026 5.7E-07 47.2 7.0 57 215-275 129-189 (194)
188 TIGR01652 ATPase-Plipid phosph 95.8 0.013 2.9E-07 63.0 5.7 68 205-272 749-819 (1057)
189 TIGR01494 ATPase_P-type ATPase 95.8 0.037 8E-07 54.6 8.3 94 99-264 347-443 (499)
190 COG1877 OtsB Trehalose-6-phosp 95.6 0.21 4.4E-06 45.4 11.7 48 205-252 180-230 (266)
191 COG3882 FkbH Predicted enzyme 95.4 0.054 1.2E-06 52.4 7.6 40 205-244 309-348 (574)
192 TIGR02245 HAD_IIID1 HAD-superf 95.4 0.049 1.1E-06 47.1 6.7 37 99-135 45-83 (195)
193 TIGR01657 P-ATPase-V P-type AT 95.4 0.09 1.9E-06 56.7 10.2 68 205-273 783-852 (1054)
194 COG5610 Predicted hydrolase (H 95.4 0.035 7.5E-07 53.4 6.1 90 106-249 106-201 (635)
195 KOG2630 Enolase-phosphatase E- 95.3 0.079 1.7E-06 46.6 7.7 114 99-268 123-248 (254)
196 KOG2469 IMP-GMP specific 5'-nu 94.8 0.19 4E-06 47.8 9.0 126 104-253 206-336 (424)
197 COG3769 Predicted hydrolase (H 94.8 0.12 2.5E-06 45.4 7.0 38 206-243 190-229 (274)
198 PLN02151 trehalose-phosphatase 93.8 0.26 5.6E-06 46.5 7.8 72 206-277 268-346 (354)
199 PLN03017 trehalose-phosphatase 93.7 0.38 8.3E-06 45.6 8.8 72 206-277 282-360 (366)
200 TIGR01689 EcbF-BcbF capsule bi 93.2 0.12 2.5E-06 41.6 3.9 15 15-29 2-16 (126)
201 TIGR01658 EYA-cons_domain eyes 92.6 0.64 1.4E-05 41.5 7.8 46 206-251 213-258 (274)
202 PF05822 UMPH-1: Pyrimidine 5' 92.1 0.35 7.6E-06 43.2 5.8 54 78-135 73-129 (246)
203 COG2216 KdpB High-affinity K+ 91.7 0.28 6.1E-06 48.1 5.0 88 100-252 448-538 (681)
204 KOG0204 Calcium transporting A 91.3 0.73 1.6E-05 47.8 7.7 159 99-296 647-813 (1034)
205 TIGR01484 HAD-SF-IIB HAD-super 91.1 0.2 4.3E-06 42.9 3.1 27 16-42 1-28 (204)
206 PLN03190 aminophospholipid tra 91.0 0.25 5.3E-06 53.9 4.3 67 205-272 852-922 (1178)
207 KOG2470 Similar to IMP-GMP spe 90.8 0.41 9E-06 44.7 5.0 122 100-249 241-374 (510)
208 TIGR01452 PGP_euk phosphoglyco 90.0 1.4 3E-05 40.0 7.8 49 97-145 16-70 (279)
209 KOG0210 P-type ATPase [Inorgan 89.6 0.94 2E-05 46.1 6.6 61 209-272 770-832 (1051)
210 TIGR02468 sucrsPsyn_pln sucros 89.6 2.7 6E-05 45.1 10.5 40 205-245 954-995 (1050)
211 KOG2961 Predicted hydrolase (H 89.1 0.62 1.3E-05 38.6 4.2 49 205-253 116-170 (190)
212 COG0647 NagD Predicted sugar p 85.8 4.1 9E-05 37.0 8.0 155 95-292 20-196 (269)
213 PF08235 LNS2: LNS2 (Lipin/Ned 83.9 6.9 0.00015 32.6 7.8 21 226-246 122-142 (157)
214 PF06189 5-nucleotidase: 5'-nu 82.8 6.7 0.00014 35.4 7.8 40 205-253 222-261 (264)
215 KOG3107 Predicted haloacid deh 82.7 14 0.0003 35.2 10.1 43 206-249 408-450 (468)
216 PLN02580 trehalose-phosphatase 82.7 2.3 4.9E-05 40.7 5.1 35 98-132 140-176 (384)
217 KOG1605 TFIIF-interacting CTD 80.7 0.085 1.8E-06 47.7 -5.0 48 98-145 130-180 (262)
218 KOG0209 P-type ATPase [Inorgan 80.0 2.6 5.6E-05 43.9 4.6 45 209-253 792-836 (1160)
219 PLN03063 alpha,alpha-trehalose 76.7 3.7 7.9E-05 43.2 4.8 73 205-277 676-785 (797)
220 KOG0206 P-type ATPase [General 76.6 1.9 4.2E-05 46.6 2.8 67 203-269 773-842 (1151)
221 TIGR00685 T6PP trehalose-phosp 75.8 2.5 5.5E-05 37.5 3.0 29 14-42 3-36 (244)
222 PLN03064 alpha,alpha-trehalose 75.0 3.9 8.5E-05 43.6 4.5 38 98-135 621-662 (934)
223 PF02358 Trehalose_PPase: Treh 74.5 3.3 7.1E-05 36.5 3.3 60 205-264 163-233 (235)
224 TIGR01457 HAD-SF-IIA-hyp2 HAD- 72.4 18 0.00038 32.2 7.6 49 98-146 16-70 (249)
225 PF06014 DUF910: Bacterial pro 71.7 1.8 3.8E-05 30.2 0.7 25 212-240 7-31 (62)
226 PLN03017 trehalose-phosphatase 71.3 3.5 7.6E-05 39.2 2.9 29 14-42 111-144 (366)
227 PRK14501 putative bifunctional 70.0 3.6 7.9E-05 42.7 2.9 30 13-42 491-525 (726)
228 KOG3128 Uncharacterized conser 69.7 15 0.00034 33.1 6.3 52 79-134 122-176 (298)
229 PLN02205 alpha,alpha-trehalose 67.8 5 0.00011 42.5 3.4 30 13-42 595-627 (854)
230 COG4502 5'(3')-deoxyribonucleo 65.2 2.4 5.3E-05 34.7 0.4 27 95-121 64-92 (180)
231 KOG3189 Phosphomannomutase [Li 63.3 8.5 0.00018 33.5 3.3 33 14-47 11-43 (252)
232 PF06437 ISN1: IMP-specific 5' 61.9 9.2 0.0002 36.4 3.6 45 207-253 349-402 (408)
233 KOG1618 Predicted phosphatase 60.2 4.5 9.7E-05 37.6 1.2 48 205-252 270-342 (389)
234 TIGR02251 HIF-SF_euk Dullard-l 59.9 5.8 0.00013 33.0 1.8 16 15-30 2-17 (162)
235 PLN02151 trehalose-phosphatase 59.5 8 0.00017 36.6 2.8 29 14-42 98-131 (354)
236 TIGR02250 FCP1_euk FCP1-like p 58.0 7.3 0.00016 32.3 2.1 17 14-30 6-22 (156)
237 TIGR00715 precor6x_red precorr 56.3 18 0.0004 32.5 4.5 63 210-276 187-255 (256)
238 TIGR01460 HAD-SF-IIA Haloacid 56.2 73 0.0016 27.9 8.3 51 96-146 11-68 (236)
239 PLN02382 probable sucrose-phos 55.7 12 0.00026 36.1 3.4 34 206-239 246-284 (413)
240 PF03332 PMM: Eukaryotic phosp 55.3 8.2 0.00018 34.0 2.0 55 206-276 161-219 (220)
241 PRK10444 UMP phosphatase; Prov 55.2 38 0.00082 30.2 6.3 48 98-145 16-69 (248)
242 KOG1618 Predicted phosphatase 52.4 19 0.00041 33.6 3.8 22 15-36 36-57 (389)
243 KOG0203 Na+/K+ ATPase, alpha s 50.3 60 0.0013 34.3 7.4 39 226-264 708-748 (1019)
244 PRK00994 F420-dependent methyl 49.9 1.9E+02 0.0042 25.9 9.6 46 205-253 72-119 (277)
245 COG4483 Uncharacterized protei 49.6 13 0.00029 26.1 1.9 27 211-241 6-32 (68)
246 PRK00192 mannosyl-3-phosphogly 49.5 27 0.00059 31.3 4.6 49 90-138 12-63 (273)
247 TIGR01458 HAD-SF-IIA-hyp3 HAD- 46.9 46 0.001 29.7 5.6 47 100-146 22-74 (257)
248 PF02358 Trehalose_PPase: Treh 46.8 22 0.00048 31.1 3.5 25 18-42 1-30 (235)
249 COG5083 SMP2 Uncharacterized p 46.7 11 0.00024 36.5 1.6 29 218-246 488-517 (580)
250 PLN03063 alpha,alpha-trehalose 43.7 1E+02 0.0022 32.6 8.2 37 98-134 531-571 (797)
251 PRK08057 cobalt-precorrin-6x r 43.7 42 0.00091 30.1 4.7 63 210-276 180-247 (248)
252 PRK10513 sugar phosphate phosp 43.5 54 0.0012 29.0 5.5 56 91-146 12-70 (270)
253 TIGR01487 SPP-like sucrose-pho 42.3 41 0.0009 28.7 4.4 48 90-137 9-59 (215)
254 TIGR02463 MPGP_rel mannosyl-3- 41.1 47 0.001 28.4 4.6 33 104-136 21-56 (221)
255 PF02571 CbiJ: Precorrin-6x re 40.4 44 0.00094 30.0 4.3 60 210-273 184-248 (249)
256 PRK01158 phosphoglycolate phos 38.8 52 0.0011 28.2 4.5 48 91-138 12-62 (230)
257 cd01766 Ufm1 Urm1-like ubiquit 37.0 74 0.0016 23.0 4.1 40 205-244 25-64 (82)
258 PRK02228 V-type ATP synthase s 35.6 87 0.0019 23.8 4.8 24 225-249 2-25 (100)
259 cd06831 PLPDE_III_ODC_like_AZI 34.5 91 0.002 29.9 5.8 44 217-273 74-119 (394)
260 PF01990 ATP-synt_F: ATP synth 34.3 68 0.0015 23.9 3.9 24 226-250 1-24 (95)
261 TIGR00099 Cof-subfamily Cof su 33.8 73 0.0016 28.0 4.7 46 91-136 8-56 (256)
262 PRK13789 phosphoribosylamine-- 33.4 4.5E+02 0.0098 25.4 11.2 66 210-276 110-176 (426)
263 PRK12702 mannosyl-3-phosphogly 33.3 71 0.0015 29.6 4.5 40 99-138 18-60 (302)
264 COG0019 LysA Diaminopimelate d 32.9 75 0.0016 30.6 4.9 48 212-273 86-135 (394)
265 PF02784 Orn_Arg_deC_N: Pyrido 32.7 86 0.0019 27.6 5.0 44 217-273 58-103 (251)
266 KOG0323 TFIIF-interacting CTD 32.5 57 0.0012 33.4 4.1 50 98-147 200-253 (635)
267 KOG2134 Polynucleotide kinase 31.9 27 0.00059 33.4 1.6 18 13-30 74-91 (422)
268 TIGR01482 SPP-subfamily Sucros 31.9 1.1E+02 0.0023 26.1 5.4 47 91-137 7-56 (225)
269 COG4850 Uncharacterized conser 31.4 1.6E+02 0.0034 27.8 6.4 37 98-134 195-235 (373)
270 COG0561 Cof Predicted hydrolas 30.9 78 0.0017 28.0 4.4 48 90-137 11-61 (264)
271 PRK15126 thiamin pyrimidine py 30.8 80 0.0017 28.0 4.5 49 90-138 10-61 (272)
272 PF08282 Hydrolase_3: haloacid 29.5 87 0.0019 26.6 4.4 46 91-136 7-55 (254)
273 PRK01395 V-type ATP synthase s 29.2 1.2E+02 0.0026 23.3 4.6 28 225-253 5-32 (104)
274 PRK10976 putative hydrolase; P 28.8 89 0.0019 27.6 4.4 48 90-137 10-60 (266)
275 PF14336 DUF4392: Domain of un 28.2 2.4E+02 0.0053 25.8 7.2 20 222-241 174-193 (291)
276 COG2099 CobK Precorrin-6x redu 27.8 2.2E+02 0.0047 25.8 6.5 60 210-275 186-251 (257)
277 PRK05294 carB carbamoyl phosph 27.8 5.7E+02 0.012 28.0 11.0 68 210-277 671-738 (1066)
278 PRK10530 pyridoxal phosphate ( 26.8 94 0.002 27.4 4.2 48 90-137 11-61 (272)
279 TIGR02461 osmo_MPG_phos mannos 26.7 1.1E+02 0.0024 26.6 4.6 38 100-137 16-56 (225)
280 PF01071 GARS_A: Phosphoribosy 26.5 3.9E+02 0.0084 23.0 7.7 68 210-277 4-72 (194)
281 PRK03669 mannosyl-3-phosphogly 26.3 1.5E+02 0.0032 26.4 5.4 47 90-136 15-64 (271)
282 cd06836 PLPDE_III_ODC_DapDC_li 26.1 1.6E+02 0.0035 27.8 5.9 43 217-273 65-109 (379)
283 smart00455 RBD Raf-like Ras-bi 25.2 66 0.0014 22.8 2.3 25 205-229 19-43 (70)
284 KOG2961 Predicted hydrolase (H 25.1 82 0.0018 26.3 3.1 30 12-41 41-71 (190)
285 COG1363 FrvX Cellulase M and r 24.5 2.1E+02 0.0047 27.1 6.2 68 210-278 273-345 (355)
286 PF01993 MTD: methylene-5,6,7, 23.2 1.5E+02 0.0033 26.6 4.5 46 205-253 71-118 (276)
287 COG4071 Uncharacterized protei 23.1 1E+02 0.0023 27.1 3.5 46 179-234 125-170 (278)
288 PRK03957 V-type ATP synthase s 23.0 1.9E+02 0.004 22.0 4.6 22 225-247 2-23 (100)
289 TIGR01486 HAD-SF-IIB-MPGP mann 22.8 1.4E+02 0.0031 26.2 4.6 34 103-136 20-56 (256)
290 PF08013 Tagatose_6_P_K: Tagat 22.7 1.8E+02 0.0038 28.3 5.3 92 117-254 21-131 (424)
291 KOG2832 TFIIF-interacting CTD 21.7 2.2E+02 0.0047 27.2 5.5 49 99-147 214-264 (393)
292 PF06437 ISN1: IMP-specific 5' 21.6 71 0.0015 30.6 2.4 20 13-32 146-165 (408)
293 KOG2456 Aldehyde dehydrogenase 21.5 6.1E+02 0.013 24.7 8.5 57 227-284 217-280 (477)
294 COG3453 Uncharacterized protei 21.4 1.5E+02 0.0031 23.8 3.7 38 205-242 43-82 (130)
295 TIGR00877 purD phosphoribosyla 21.3 7.1E+02 0.015 23.6 9.5 67 210-277 106-174 (423)
296 COG0078 ArgF Ornithine carbamo 21.0 1.4E+02 0.0031 27.7 4.1 38 211-249 140-183 (310)
297 CHL00162 thiG thiamin biosynth 20.6 4.7E+02 0.01 23.7 7.2 46 205-254 174-222 (267)
298 PF02786 CPSase_L_D2: Carbamoy 20.5 2E+02 0.0043 25.0 4.9 85 210-296 3-89 (211)
299 KOG0622 Ornithine decarboxylas 20.4 6.5E+02 0.014 24.5 8.5 34 214-247 114-149 (448)
300 PRK12815 carB carbamoyl phosph 20.4 1.1E+03 0.023 26.0 11.3 131 102-298 620-752 (1068)
No 1
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.97 E-value=3.5e-30 Score=219.28 Aligned_cols=231 Identities=61% Similarity=1.072 Sum_probs=215.2
Q ss_pred CCCcccccccc-cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCC
Q 022360 1 MEYEGRYRMAA-AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYD 79 (298)
Q Consensus 1 ~~~~~~~~~~~-~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 79 (298)
|.+++++...+ .++++++||+|+||++.+..+...+++.|.+|+.+.+|++.+.+..+...++..||.+..++...+..
T Consensus 1 m~f~~~~~~~~~~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~ 80 (244)
T KOG3109|consen 1 MTFEGDVFISSGPNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYI 80 (244)
T ss_pred CCCCCcccccCCccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhccc
Confidence 67777777664 57899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHhhcccCCCCCCCChhHHHHHHhCCCc-EEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCC
Q 022360 80 FDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLPLR-KIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSD 158 (298)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~-~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~ 158 (298)
.+.++|.++++++++++.++|.+.+.++|-.++.+ ..++||+...++.++++.+|+.++|+++++++.....
T Consensus 81 ~d~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~------- 153 (244)
T KOG3109|consen 81 FDADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI------- 153 (244)
T ss_pred CCHHHHHHHhhccCcHhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC-------
Confidence 99999999999999999999999999999999977 9999999999999999999999999999999865431
Q ss_pred ChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCccchH
Q 022360 159 DEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN-PQRTLFFEDSVRNIQ 237 (298)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~-p~~~i~iGDs~~Di~ 237 (298)
+.|+.|||.+.+|+.+.+..|++ |.++++|.||.++|+
T Consensus 154 -----------------------------------------~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~ 192 (244)
T KOG3109|consen 154 -----------------------------------------EKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQ 192 (244)
T ss_pred -----------------------------------------CCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHH
Confidence 23445999999999999999998 999999999999999
Q ss_pred HHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhhccC
Q 022360 238 AGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESD 279 (298)
Q Consensus 238 ~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~~~ 279 (298)
+|+++||.+++++.......+++++.+.+...+.++.+|+..
T Consensus 193 ~ak~vGl~tvlv~~~~~~~~~d~~l~~ih~~k~a~p~l~~~~ 234 (244)
T KOG3109|consen 193 TAKEVGLKTVLVGREHKIKGVDYALEQIHNNKEALPELWEIL 234 (244)
T ss_pred HHHhccceeEEEEeeecccchHHHHHHhhchhhhchHHhhcc
Confidence 999999999999999999999999999999999999999863
No 2
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.94 E-value=6.4e-26 Score=193.93 Aligned_cols=184 Identities=52% Similarity=0.921 Sum_probs=152.6
Q ss_pred cEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCCChhhHHHHhhcccC
Q 022360 15 DCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLP 94 (298)
Q Consensus 15 k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (298)
++|+|||||||+|+...+..++.+.+.+++.+..|++......+....+..+|.....+... ...+.+.+...+.+...
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~ 79 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLP 79 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCC
Confidence 47999999999999999999999888887888889987766666666666677665554322 34456667776665444
Q ss_pred CCCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360 95 YENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 174 (298)
Q Consensus 95 ~~~~~~~~g~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (298)
+....++||+.++|+.|+.+++|+||+....+...++++|+.++|+.++++++.+...
T Consensus 80 ~~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~---------------------- 137 (184)
T TIGR01993 80 YEKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDY---------------------- 137 (184)
T ss_pred HHhCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCcc----------------------
Confidence 4567899999999999999999999999999999999999999999999998766300
Q ss_pred CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360 175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 249 (298)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v 249 (298)
.++||+|++|..+++++|++|++|++|||+..|+++|+++|+.++++
T Consensus 138 ----------------------------~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 138 ----------------------------LLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred ----------------------------CCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 01499999999999999999999999999999999999999999874
No 3
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.94 E-value=7.2e-26 Score=198.09 Aligned_cols=199 Identities=20% Similarity=0.259 Sum_probs=148.4
Q ss_pred cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCCChhhH----HH
Q 022360 12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDY----HS 87 (298)
Q Consensus 12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~ 87 (298)
|++++|+||+||||+|+...+..++...+++ ++....... .+....|.+.............+.+ ..
T Consensus 1 m~~~~viFD~DGTL~ds~~~~~~a~~~~~~~-----~~~~~~~~~----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 71 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNELIISSFLHTLKT-----YYPNQYKRE----DVLPFIGPSLHDTFSKIDESKVEEMITTYRE 71 (214)
T ss_pred CCccEEEEeCCCcCccCHHHHHHHHHHHHHH-----hCCCCCCHH----HHHHHhCcCHHHHHHhcCHHHHHHHHHHHHH
Confidence 3589999999999999988888887764443 333211111 1223345554433221111111222 22
Q ss_pred HhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHH
Q 022360 88 FVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIA 164 (298)
Q Consensus 88 ~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 164 (298)
..... ......++||+.++|+.|+ ++++|+||+....+...++.+|+..+|+.++++++...
T Consensus 72 ~~~~~-~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~-------------- 136 (214)
T PRK13288 72 FNHEH-HDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEH-------------- 136 (214)
T ss_pred HHHHh-hhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCC--------------
Confidence 21111 1234678999999999885 67999999999999999999999999999999887654
Q ss_pred HHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCC
Q 022360 165 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL 244 (298)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~ 244 (298)
+||+|+.+.+++++++++|++|++|||+.+|+++|+++|+
T Consensus 137 ----------------------------------------~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~ 176 (214)
T PRK13288 137 ----------------------------------------AKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGT 176 (214)
T ss_pred ----------------------------------------CCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC
Confidence 7999999999999999999999999999999999999999
Q ss_pred eEEEecCCCC------CCCCCEEeCCHHHHHHHhHH
Q 022360 245 DTVLIGKSQR------VKGADYAFESIHNIKEAIPE 274 (298)
Q Consensus 245 ~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~ 274 (298)
.++++.++.. ...++++++++.++.+++.+
T Consensus 177 ~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i~~ 212 (214)
T PRK13288 177 KTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIVGD 212 (214)
T ss_pred eEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHHhh
Confidence 9999987642 34699999999999887754
No 4
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.93 E-value=2.1e-25 Score=199.95 Aligned_cols=199 Identities=25% Similarity=0.299 Sum_probs=143.9
Q ss_pred ccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHH-HccC-CCC-----hh
Q 022360 11 AAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLR-AIGY-DFD-----YD 83 (298)
Q Consensus 11 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~-~~~-----~~ 83 (298)
..++++|+|||||||+|+...+..++...++++... .|++..... . .....|.+..... .+.. ... ..
T Consensus 19 ~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~-~g~~~~~~~-~---~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 93 (248)
T PLN02770 19 LAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFN-GGVPITEEF-F---VENIAGKHNEDIALGLFPDDLERGLKFTD 93 (248)
T ss_pred cCccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccc-cCCCCCHHH-H---HHHcCCCCHHHHHHHHcCcchhhHHHHHH
Confidence 355899999999999999888888888654442110 122222211 0 0111243333221 1110 000 01
Q ss_pred hHHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCCh
Q 022360 84 DYHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDE 160 (298)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~ 160 (298)
.+...+.. .......++||+.++|+.|+ ++++|+||+....++..++++++.++|+.++++++++.
T Consensus 94 ~~~~~y~~-~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~---------- 162 (248)
T PLN02770 94 DKEALFRK-LASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEH---------- 162 (248)
T ss_pred HHHHHHHH-HHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCC----------
Confidence 11111111 11235788999999999884 78999999999999999999999999999999998765
Q ss_pred hhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHH
Q 022360 161 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGK 240 (298)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~ 240 (298)
+||+|+.|.+++++++++|++|++|||+.+|+++|+
T Consensus 163 --------------------------------------------~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~ 198 (248)
T PLN02770 163 --------------------------------------------AKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGV 198 (248)
T ss_pred --------------------------------------------CCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHH
Confidence 799999999999999999999999999999999999
Q ss_pred HcCCeEEEecCCCC-----CCCCCEEeCCHHHHH
Q 022360 241 RVGLDTVLIGKSQR-----VKGADYAFESIHNIK 269 (298)
Q Consensus 241 ~aG~~~v~v~~~~~-----~~~ad~i~~s~~~l~ 269 (298)
++|+.++++.++.. ...++++++++.++.
T Consensus 199 ~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~ 232 (248)
T PLN02770 199 AAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPK 232 (248)
T ss_pred HCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhH
Confidence 99999999976542 457999999999944
No 5
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.93 E-value=4.5e-25 Score=194.41 Aligned_cols=199 Identities=23% Similarity=0.287 Sum_probs=149.1
Q ss_pred cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHH--ccCC------CChh
Q 022360 12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRA--IGYD------FDYD 83 (298)
Q Consensus 12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~------~~~~ 83 (298)
+++++|+||+||||+|+...+..++.. ..+..|.+......+. ...|........ .+.. ...+
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~ig~~~~~~~~~~~~~~~~~~~~~~~~ 72 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNA-----ALAELGLPPLDEEEIR----QLIGLGLDELIERLLGEADEEAAAELVE 72 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHH-----HHHHcCCCCCCHHHHH----HHhcCCHHHHHHHHhccccchhHHHHHH
Confidence 568999999999999999988888774 6667777643333322 223333222211 0100 0112
Q ss_pred hHHHHhhcccCCC-CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360 84 DYHSFVHGRLPYE-NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD 159 (298)
Q Consensus 84 ~~~~~~~~~~~~~-~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~ 159 (298)
.+.+.+....... ...++||+.++|..|+ ++++|+|+.....++..++++|+..+|+.+++.++...
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~--------- 143 (220)
T COG0546 73 RLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPP--------- 143 (220)
T ss_pred HHHHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCC---------
Confidence 2222222111111 2578999999999885 67899999999999999999999999999999554433
Q ss_pred hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360 160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG 239 (298)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a 239 (298)
.||+|..+..+++++|++|++++||||+.+|+++|
T Consensus 144 ---------------------------------------------~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA 178 (220)
T COG0546 144 ---------------------------------------------PKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAA 178 (220)
T ss_pred ---------------------------------------------CCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHH
Confidence 79999999999999999988999999999999999
Q ss_pred HHcCCeEEEecCCC------CCCCCCEEeCCHHHHHHHhH
Q 022360 240 KRVGLDTVLIGKSQ------RVKGADYAFESIHNIKEAIP 273 (298)
Q Consensus 240 ~~aG~~~v~v~~~~------~~~~ad~i~~s~~~l~~~l~ 273 (298)
+++|+.++++.++. ....+|+++.++.+|...|.
T Consensus 179 ~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 179 KAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred HHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 99999999998865 25779999999999988764
No 6
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.93 E-value=2.1e-24 Score=189.34 Aligned_cols=196 Identities=16% Similarity=0.202 Sum_probs=144.3
Q ss_pred ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-HHcc--CCCChhh------
Q 022360 14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-RAIG--YDFDYDD------ 84 (298)
Q Consensus 14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~--~~~~~~~------ 84 (298)
+|+|+|||||||+++.+.+..++...+ ++.|.+....+... ...|.+.... ..+. ...+...
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~-----~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAV-----TAAGLSPTPEEVQS----AWMGQSKIEAIRALLALDGADEAEAQAAFA 71 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHH-----HHcCCCCCHHHHHH----hhcCCCHHHHHHHHHhccCCCHHHHHHHHH
Confidence 589999999999999988888887643 44566543321111 0234333322 1111 0111111
Q ss_pred -HHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCC--CccceeEeecCCCCCCCCCCCC
Q 022360 85 -YHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLE--DCFEGIICFETLNPTHKNTVSD 158 (298)
Q Consensus 85 -~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~--~~f~~i~~~~~~~~~~~~~~~~ 158 (298)
+.+.+.+........++||+.++|+.|+ ++++|+||+....++..++++++. .+|+.++++++.+.
T Consensus 72 ~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~-------- 143 (220)
T TIGR03351 72 DFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAA-------- 143 (220)
T ss_pred HHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCC--------
Confidence 2222222111234578999999999984 679999999999999999999998 99999999987664
Q ss_pred ChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCccchH
Q 022360 159 DEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN-PQRTLFFEDSVRNIQ 237 (298)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~-p~~~i~iGDs~~Di~ 237 (298)
.||+|+++..+++++++. |++|++|||+.+|++
T Consensus 144 ----------------------------------------------~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~ 177 (220)
T TIGR03351 144 ----------------------------------------------GRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLE 177 (220)
T ss_pred ----------------------------------------------CCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHH
Confidence 799999999999999997 799999999999999
Q ss_pred HHHHcCCeE-EEecCCCC------CCCCCEEeCCHHHHHHHh
Q 022360 238 AGKRVGLDT-VLIGKSQR------VKGADYAFESIHNIKEAI 272 (298)
Q Consensus 238 ~a~~aG~~~-v~v~~~~~------~~~ad~i~~s~~~l~~~l 272 (298)
+|+++|+.+ +++.++.. ...++++++++.+|...+
T Consensus 178 aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 178 AGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPALL 219 (220)
T ss_pred HHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHhh
Confidence 999999999 88876542 457899999999987654
No 7
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=6.6e-25 Score=194.42 Aligned_cols=196 Identities=21% Similarity=0.183 Sum_probs=143.2
Q ss_pred CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHH-ccCCCCh-------hh
Q 022360 13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRA-IGYDFDY-------DD 84 (298)
Q Consensus 13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~-------~~ 84 (298)
++++|+|||||||+|+...+..++.. ..+++|.+....+... ...|........ ....... ..
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNA-----MLAARGRAPITLAQLR----PVVSKGARAMLAVAFPELDAAARDALIPE 81 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHH----HHhhhHHHHHHHHHhccCChHHHHHHHHH
Confidence 36899999999999998888777775 4455665432222211 112222222211 1111111 12
Q ss_pred HHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChh
Q 022360 85 YHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDED 161 (298)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~ 161 (298)
+.+.+.... .....++||+.++|+.|+ ++++|+||+....+...++++++..+|+.++++++.+.
T Consensus 82 ~~~~~~~~~-~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~----------- 149 (229)
T PRK13226 82 FLQRYEALI-GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAE----------- 149 (229)
T ss_pred HHHHHHHhh-hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCC-----------
Confidence 222222211 134678999999999884 67899999999989999999999999998888776553
Q ss_pred hHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHH
Q 022360 162 DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR 241 (298)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~ 241 (298)
.||+|+.+.++++++|++|++|++|||+.+|+++|++
T Consensus 150 -------------------------------------------~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~ 186 (229)
T PRK13226 150 -------------------------------------------RKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARA 186 (229)
T ss_pred -------------------------------------------CCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHH
Confidence 7999999999999999999999999999999999999
Q ss_pred cCCeEEEecCCCC-------CCCCCEEeCCHHHHHHHh
Q 022360 242 VGLDTVLIGKSQR-------VKGADYAFESIHNIKEAI 272 (298)
Q Consensus 242 aG~~~v~v~~~~~-------~~~ad~i~~s~~~l~~~l 272 (298)
+|+.++++.++.. ...++++++++.+|.+.+
T Consensus 187 aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 187 AGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPA 224 (229)
T ss_pred CCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHh
Confidence 9999999977642 346999999999987654
No 8
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.92 E-value=8.5e-25 Score=192.47 Aligned_cols=198 Identities=18% Similarity=0.189 Sum_probs=146.2
Q ss_pred ccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHH-----HccC-CCCh
Q 022360 9 MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLR-----AIGY-DFDY 82 (298)
Q Consensus 9 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~-~~~~ 82 (298)
|++.++++|+||+||||+|+...+..++.+ +.++.|.+......+ ....|....... .... ....
T Consensus 2 ~~~~~~k~iiFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~ 72 (222)
T PRK10826 2 STPRQILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRREEL----PDTLGLRIDQVVDLWYARQPWNGPSR 72 (222)
T ss_pred CCcccCcEEEEcCCCCCCcCHHHHHHHHHH-----HHHHCCCCCCHHHHH----HHhhCCCHHHHHHHHHHhcCCCCCCH
Confidence 345568999999999999988777777664 445566654332221 222333322211 1111 1112
Q ss_pred hhH----HHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCC
Q 022360 83 DDY----HSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNT 155 (298)
Q Consensus 83 ~~~----~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~ 155 (298)
..+ .+..... ......++||+.++|+.|+ ++++|+|++....++..++++++..+|+.++++++.+.
T Consensus 73 ~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----- 146 (222)
T PRK10826 73 QEVVQRIIARVISL-IEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPY----- 146 (222)
T ss_pred HHHHHHHHHHHHHH-HhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCC-----
Confidence 221 1111111 1245788999999999884 78999999999999999999999999999999887664
Q ss_pred CCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccc
Q 022360 156 VSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRN 235 (298)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~D 235 (298)
+||+|+.+..+++++|++|++|++|||+.+|
T Consensus 147 -------------------------------------------------~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~D 177 (222)
T PRK10826 147 -------------------------------------------------SKPHPEVYLNCAAKLGVDPLTCVALEDSFNG 177 (222)
T ss_pred -------------------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCChhh
Confidence 7999999999999999999999999999999
Q ss_pred hHHHHHcCCeEEEecCCCC-----CCCCCEEeCCHHHHHH
Q 022360 236 IQAGKRVGLDTVLIGKSQR-----VKGADYAFESIHNIKE 270 (298)
Q Consensus 236 i~~a~~aG~~~v~v~~~~~-----~~~ad~i~~s~~~l~~ 270 (298)
+++|+++|+.++++..+.. ...+++++.++.+|..
T Consensus 178 i~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 178 MIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTA 217 (222)
T ss_pred HHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhh
Confidence 9999999999999977643 3468999999999854
No 9
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.92 E-value=2.6e-24 Score=188.65 Aligned_cols=198 Identities=25% Similarity=0.350 Sum_probs=139.5
Q ss_pred ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhH--HHHHHHHHHHHhCCC----HHH-HHHccCCCChhhHH
Q 022360 14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSK--IEDLGNLLYKNYGTT----MAG-LRAIGYDFDYDDYH 86 (298)
Q Consensus 14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~g~~----~~~-~~~~~~~~~~~~~~ 86 (298)
+++|+||+||||+++.+.+..++....+. ....|++... ............+.. ... ....+.....+...
T Consensus 2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLAEKARRNAIEV--LIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVA 79 (221)
T ss_pred ceEEEEeCCCCCcCCCCccCHHHHHHHHH--HHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHH
Confidence 68999999999999988877776643332 2333443322 111111112222211 111 11111111111111
Q ss_pred H---HhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCCh
Q 022360 87 S---FVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDE 160 (298)
Q Consensus 87 ~---~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~ 160 (298)
. ..... ....+.++||+.++|+.|+ ++++|+||+....+...++++++..+|+.++++++.+.
T Consensus 80 ~~~~~~~~~-~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~---------- 148 (221)
T TIGR02253 80 AFVYAYHKL-KFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGV---------- 148 (221)
T ss_pred HHHHHHHHH-HHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCC----------
Confidence 1 11111 1234688999999999884 67999999999999999999999999999999988775
Q ss_pred hhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHH
Q 022360 161 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAG 239 (298)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a 239 (298)
.||+|+.|..+++++|++|++|++|||+. +|+.+|
T Consensus 149 --------------------------------------------~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A 184 (221)
T TIGR02253 149 --------------------------------------------EKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGA 184 (221)
T ss_pred --------------------------------------------CCCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHH
Confidence 79999999999999999999999999998 999999
Q ss_pred HHcCCeEEEecCCCC-------CCCCCEEeCCHHHH
Q 022360 240 KRVGLDTVLIGKSQR-------VKGADYAFESIHNI 268 (298)
Q Consensus 240 ~~aG~~~v~v~~~~~-------~~~ad~i~~s~~~l 268 (298)
+++|+.++++.++.. ...+++++.++.+|
T Consensus 185 ~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 185 KNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred HHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 999999999977543 24578999988775
No 10
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.92 E-value=3.3e-24 Score=194.05 Aligned_cols=202 Identities=16% Similarity=0.160 Sum_probs=144.5
Q ss_pred ccCccEEEEeCCCCccCCCcc-HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH--------------H-H
Q 022360 11 AAKYDCLLFDLDDTLYPYSSG-IAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG--------------L-R 74 (298)
Q Consensus 11 ~~~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~--------------~-~ 74 (298)
|+++|+|+|||||||+|+... +..++.. ..+.+|++.... . +....|..... + .
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~~-~----~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 70 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVE-----AFAQFGVEITLE-E----ARGPMGLGKWDHIRALLKMPRVAARWQA 70 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHH-----HHHHcCCCCCHH-H----HHHhcCCCHHHHHHHHHhcHHHHHHHHH
Confidence 345899999999999997543 3455554 334456543221 1 11222322110 0 1
Q ss_pred HccCCCChhhH-------HHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCcc-ceeE
Q 022360 75 AIGYDFDYDDY-------HSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCF-EGII 143 (298)
Q Consensus 75 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f-~~i~ 143 (298)
.++...+.+.+ ...+.+.. .....++||+.++|+.|+ ++++|+||.....+...++.+++.++| +.++
T Consensus 71 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~ 149 (267)
T PRK13478 71 VFGRLPTEADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVV 149 (267)
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEE
Confidence 12222222211 11111111 245688999999999984 789999999999999999999988875 8888
Q ss_pred eecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCC-
Q 022360 144 CFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN- 222 (298)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~- 222 (298)
++++.+. .||+|+.|..+++++|+.
T Consensus 150 ~~~~~~~------------------------------------------------------~KP~p~~~~~a~~~l~~~~ 175 (267)
T PRK13478 150 TTDDVPA------------------------------------------------------GRPYPWMALKNAIELGVYD 175 (267)
T ss_pred cCCcCCC------------------------------------------------------CCCChHHHHHHHHHcCCCC
Confidence 8877654 799999999999999996
Q ss_pred CCcEEEEcCCccchHHHHHcCCeEEEecCCCC-----------------------------CCCCCEEeCCHHHHHHHhH
Q 022360 223 PQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR-----------------------------VKGADYAFESIHNIKEAIP 273 (298)
Q Consensus 223 p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~-----------------------------~~~ad~i~~s~~~l~~~l~ 273 (298)
|++|++|||+.+|+++|+++|+.++++.++.. ..+++++++|+.+|.+.|.
T Consensus 176 ~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~ 255 (267)
T PRK13478 176 VAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVIDTIADLPAVIA 255 (267)
T ss_pred CcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHHHHHHHH
Confidence 69999999999999999999999999977642 4679999999999998887
Q ss_pred Hhhc
Q 022360 274 ELWE 277 (298)
Q Consensus 274 ~~~~ 277 (298)
.+..
T Consensus 256 ~~~~ 259 (267)
T PRK13478 256 DIEA 259 (267)
T ss_pred HHHH
Confidence 6654
No 11
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.92 E-value=3.4e-24 Score=192.31 Aligned_cols=194 Identities=16% Similarity=0.165 Sum_probs=140.3
Q ss_pred ccEEEEeCCCCccCCCcc-HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH---------------HHHcc
Q 022360 14 YDCLLFDLDDTLYPYSSG-IAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG---------------LRAIG 77 (298)
Q Consensus 14 ~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~---------------~~~~~ 77 (298)
+++|+|||||||+|+... +..++... .++.|++.... . +....|.+... ...++
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~-----~~~~g~~~~~~-~----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEA-----FAEFGVQITLE-E----ARGPMGLGKWDHIRALLKMPAVAERWRAKFG 71 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHH-----HHHcCCCccHH-H----HHHhcCccHHHHHHHHhcCHHHHHHHHHHhC
Confidence 689999999999997543 45555543 34456543221 1 11122222110 11222
Q ss_pred CCCChhh-------HHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCcc-ceeEeec
Q 022360 78 YDFDYDD-------YHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCF-EGIICFE 146 (298)
Q Consensus 78 ~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f-~~i~~~~ 146 (298)
...+.+. +...+.... .....++||+.++|+.|+ ++++|+||+....++..++++++..+| +.+++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~ 150 (253)
T TIGR01422 72 RLPTEADIEAIYEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTD 150 (253)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccc
Confidence 2222222 221111111 245788999999999884 789999999999999999999999986 8899888
Q ss_pred CCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCC-CCc
Q 022360 147 TLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN-PQR 225 (298)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~-p~~ 225 (298)
+++. .||+|+.+..+++++|+. |++
T Consensus 151 ~~~~------------------------------------------------------~KP~p~~~~~a~~~l~~~~~~~ 176 (253)
T TIGR01422 151 DVPA------------------------------------------------------GRPAPWMALKNAIELGVYDVAA 176 (253)
T ss_pred cCCC------------------------------------------------------CCCCHHHHHHHHHHcCCCCchh
Confidence 7664 799999999999999995 999
Q ss_pred EEEEcCCccchHHHHHcCCeEEEecCCCC-----------------------------CCCCCEEeCCHHHHHHHh
Q 022360 226 TLFFEDSVRNIQAGKRVGLDTVLIGKSQR-----------------------------VKGADYAFESIHNIKEAI 272 (298)
Q Consensus 226 ~i~iGDs~~Di~~a~~aG~~~v~v~~~~~-----------------------------~~~ad~i~~s~~~l~~~l 272 (298)
|++|||+.+|+++|+++|+.++++.++.. ..+|+++++++.+|.++|
T Consensus 177 ~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 177 CVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred eEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 99999999999999999999999977642 357999999999987764
No 12
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.92 E-value=8.6e-25 Score=192.09 Aligned_cols=198 Identities=17% Similarity=0.227 Sum_probs=141.9
Q ss_pred cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChhhHH
Q 022360 12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDDYH 86 (298)
Q Consensus 12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~ 86 (298)
+++++|+||+||||+|+...+..++.. ..++.|++....+ ... ...|.+.... ...+...+.+.+.
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~-~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVT-----MFAEFGITLSLEE-VFK---RFKGVKLYEIIDIISKEHGVTLAKAELE 72 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHH-----HHHHcCCCCCHHH-HHH---HhcCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence 358999999999999987777777664 3445676543211 111 1122222211 2234444444443
Q ss_pred HHhhcc---cCCCCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccc-eeEeecCCCCCCCCCCCCChhh
Q 022360 87 SFVHGR---LPYENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFE-GIICFETLNPTHKNTVSDDEDD 162 (298)
Q Consensus 87 ~~~~~~---~~~~~~~~~~g~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~-~i~~~~~~~~~~~~~~~~~~~~ 162 (298)
..+... .......++||+.++|+.|+++++|+||+....+...++++++.++|+ .++++++.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~------------ 140 (221)
T PRK10563 73 PVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQR------------ 140 (221)
T ss_pred HHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCC------------
Confidence 332211 112457889999999999999999999999999999999999999996 5667766664
Q ss_pred HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360 163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 242 (298)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a 242 (298)
.||+|+.|..+++++|++|++|++|||+.+||++|+++
T Consensus 141 ------------------------------------------~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~a 178 (221)
T PRK10563 141 ------------------------------------------WKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAA 178 (221)
T ss_pred ------------------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHC
Confidence 79999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCC----CCCCCEEeCCHHHHHHHh
Q 022360 243 GLDTVLIGKSQR----VKGADYAFESIHNIKEAI 272 (298)
Q Consensus 243 G~~~v~v~~~~~----~~~ad~i~~s~~~l~~~l 272 (298)
|+.++++..+.. ...++.++.++.+|.+.+
T Consensus 179 G~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 212 (221)
T PRK10563 179 GMEVFYFCADPHNKPIDHPLVTTFTDLAQLPELW 212 (221)
T ss_pred CCEEEEECCCCCCcchhhhhhHHHHHHHHHHHHH
Confidence 999998854321 223445566776666544
No 13
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.92 E-value=2.3e-24 Score=194.47 Aligned_cols=204 Identities=12% Similarity=0.138 Sum_probs=148.4
Q ss_pred cCccEEEEeCCCCccCCCcc-HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHH-Hc-cCCCChh---hH
Q 022360 12 AKYDCLLFDLDDTLYPYSSG-IAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLR-AI-GYDFDYD---DY 85 (298)
Q Consensus 12 ~~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-~~-~~~~~~~---~~ 85 (298)
..+|+|||||||||+|+... +..++.. +.+.+|+.....+. .....|.+..... .+ ....+.+ .+
T Consensus 22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~~-----~~~~~G~~~~~~e~----~~~~~G~~~~~~~~~l~~~~~~~~~~~~l 92 (260)
T PLN03243 22 CGWLGVVLEWEGVIVEDDSELERKAWRA-----LAEEEGKRPPPAFL----LKRAEGMKNEQAISEVLCWSRDFLQMKRL 92 (260)
T ss_pred CCceEEEEeCCCceeCCchHHHHHHHHH-----HHHHcCCCCCHHHH----HHHhcCCCHHHHHHHHhccCCCHHHHHHH
Confidence 45899999999999998644 4456664 45556776433211 1223344433221 11 1111111 11
Q ss_pred HHHhhc---ccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360 86 HSFVHG---RLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD 159 (298)
Q Consensus 86 ~~~~~~---~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~ 159 (298)
...... ........++||+.++|+.|+ ++++|+||+....++..++++++..+|+.++++++...
T Consensus 93 ~~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~--------- 163 (260)
T PLN03243 93 AIRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYR--------- 163 (260)
T ss_pred HHHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCC---------
Confidence 111111 111134678999999999985 78999999999999999999999999999999988764
Q ss_pred hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360 160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG 239 (298)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a 239 (298)
+||+|++|..+++++|++|++|++|||+.+|+++|
T Consensus 164 ---------------------------------------------~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA 198 (260)
T PLN03243 164 ---------------------------------------------GKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAA 198 (260)
T ss_pred ---------------------------------------------CCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHH
Confidence 79999999999999999999999999999999999
Q ss_pred HHcCCeEEEecCCC---CCCCCCEEeCCHHHHHHHhHHhhcc
Q 022360 240 KRVGLDTVLIGKSQ---RVKGADYAFESIHNIKEAIPELWES 278 (298)
Q Consensus 240 ~~aG~~~v~v~~~~---~~~~ad~i~~s~~~l~~~l~~~~~~ 278 (298)
+++|+.++++.... ....++++++++++|...+..-++.
T Consensus 199 ~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~~~~~~ 240 (260)
T PLN03243 199 HDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDLKNLSD 240 (260)
T ss_pred HHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHHHHhhhhc
Confidence 99999999885322 2346899999999998777666554
No 14
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.92 E-value=5.8e-24 Score=184.84 Aligned_cols=193 Identities=18% Similarity=0.268 Sum_probs=144.5
Q ss_pred EEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-HHccCCCCh-hhHHHHhhcccC
Q 022360 17 LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-RAIGYDFDY-DDYHSFVHGRLP 94 (298)
Q Consensus 17 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~-~~~~~~~~~~~~ 94 (298)
|+|||||||+|+.+.+..++...+.+ ..|.+....+ .+....|...... ..++.+... ..+...... .
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 70 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYRE----VVGDGPAPFE----EYRRHLGRYFPDIMRIMGLPLEMEEPFVRESYR--L 70 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHH----hcCCCCCCHH----HHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHH--h
Confidence 68999999999988888887764332 2344221111 1223344444333 223322111 112111111 1
Q ss_pred CCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360 95 YENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAS 171 (298)
Q Consensus 95 ~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (298)
.....++||+.++|++|+ ++++|+||+....++..++++++.++|+.++++++.+.
T Consensus 71 ~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~--------------------- 129 (205)
T TIGR01454 71 AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPR--------------------- 129 (205)
T ss_pred hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCC---------------------
Confidence 245788999999999884 78999999999999999999999999999998887654
Q ss_pred ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360 172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK 251 (298)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~ 251 (298)
+||+|..+..++++++++|++|++|||+.+|+.+|+++|+.++++.+
T Consensus 130 ---------------------------------~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~ 176 (205)
T TIGR01454 130 ---------------------------------PKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALW 176 (205)
T ss_pred ---------------------------------CCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence 79999999999999999999999999999999999999999999977
Q ss_pred CCC------CCCCCEEeCCHHHHHHHhH
Q 022360 252 SQR------VKGADYAFESIHNIKEAIP 273 (298)
Q Consensus 252 ~~~------~~~ad~i~~s~~~l~~~l~ 273 (298)
+.. ...++++++++.+|.++++
T Consensus 177 g~~~~~~l~~~~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 177 GEGDAGELLAARPDFLLRKPQSLLALCR 204 (205)
T ss_pred cCCChhhhhhcCCCeeeCCHHHHHHHhh
Confidence 652 4579999999999988765
No 15
>PRK11587 putative phosphatase; Provisional
Probab=99.92 E-value=7.9e-24 Score=185.98 Aligned_cols=192 Identities=19% Similarity=0.214 Sum_probs=139.0
Q ss_pred cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH-HHHccCCCChhhHHHHhh
Q 022360 12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG-LRAIGYDFDYDDYHSFVH 90 (298)
Q Consensus 12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~ 90 (298)
|++++|+|||||||+|+...+..++.+ ..++.|++.... .. ...|.+... +..+....+.+.+.+.+.
T Consensus 1 M~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~---~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 69 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPAVERAWSN-----WADRHGIAPDEV---LN---FIHGKQAITSLRHFMAGASEAEIQAEFT 69 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHHHHHHHHH-----HHHHcCCCHHHH---HH---HHcCCCHHHHHHHHhccCCcHHHHHHHH
Confidence 357999999999999998888888775 445567754221 11 112333322 122221122222221111
Q ss_pred -----cccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhh
Q 022360 91 -----GRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDD 162 (298)
Q Consensus 91 -----~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~ 162 (298)
.........++||+.++|+.|+ ++++|+||+........++..++ .+|+.+++.++...
T Consensus 70 ~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~------------ 136 (218)
T PRK11587 70 RLEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKR------------ 136 (218)
T ss_pred HHHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcC------------
Confidence 1111245678999999998884 78999999988888888888888 46778887776543
Q ss_pred HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360 163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 242 (298)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a 242 (298)
.||+|+.+..+++++|++|++|++|||+.+|+++|+++
T Consensus 137 ------------------------------------------~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~a 174 (218)
T PRK11587 137 ------------------------------------------GKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAA 174 (218)
T ss_pred ------------------------------------------CCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHC
Confidence 69999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCC---CCCCCEEeCCHHHHH
Q 022360 243 GLDTVLIGKSQR---VKGADYAFESIHNIK 269 (298)
Q Consensus 243 G~~~v~v~~~~~---~~~ad~i~~s~~~l~ 269 (298)
|+.++++.++.. ...++++++++.+|.
T Consensus 175 G~~~i~v~~~~~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 175 GCHVIAVNAPADTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred CCEEEEECCCCchhhhccCCEEecchhhee
Confidence 999999976542 456899999998874
No 16
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.92 E-value=5e-24 Score=185.69 Aligned_cols=191 Identities=26% Similarity=0.308 Sum_probs=140.3
Q ss_pred EEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChh---h----
Q 022360 17 LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYD---D---- 84 (298)
Q Consensus 17 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~---~---- 84 (298)
|+|||||||+|+...+..++.. ..++.|.+....... ....|...... ...+...+.+ .
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNM-----ALAALGLPPATLARV----IGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKL 71 (213)
T ss_pred CeecCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHHhcccHHHHHHHHhhccccccChHHHHHHHHH
Confidence 6999999999987777766664 344566643222221 12233332211 1112222211 1
Q ss_pred HHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChh
Q 022360 85 YHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDED 161 (298)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~ 161 (298)
+...+... ......++||+.++|+.|+ ++++|+|++....++..++++++..+|+.++++++.+.
T Consensus 72 ~~~~~~~~-~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------- 139 (213)
T TIGR01449 72 FDRHYEEV-AGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQ----------- 139 (213)
T ss_pred HHHHHHHh-ccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCC-----------
Confidence 22222221 1234678999999999885 68999999999999999999999999999998887654
Q ss_pred hHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHH
Q 022360 162 DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR 241 (298)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~ 241 (298)
.||+|+.+..+++++|++|++|++|||+.+|+++|++
T Consensus 140 -------------------------------------------~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~ 176 (213)
T TIGR01449 140 -------------------------------------------RKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARA 176 (213)
T ss_pred -------------------------------------------CCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHH
Confidence 7999999999999999999999999999999999999
Q ss_pred cCCeEEEecCCCC------CCCCCEEeCCHHHHHHH
Q 022360 242 VGLDTVLIGKSQR------VKGADYAFESIHNIKEA 271 (298)
Q Consensus 242 aG~~~v~v~~~~~------~~~ad~i~~s~~~l~~~ 271 (298)
+|+.++++.++.. ...++++++++.+|..+
T Consensus 177 aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 177 AGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred CCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 9999999976542 35789999999998764
No 17
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.92 E-value=6.7e-24 Score=199.16 Aligned_cols=210 Identities=11% Similarity=0.133 Sum_probs=153.0
Q ss_pred CccEEEEeCCCCccCCCccHH-HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHH-Hcc-CCCChh---hH-
Q 022360 13 KYDCLLFDLDDTLYPYSSGIA-AACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLR-AIG-YDFDYD---DY- 85 (298)
Q Consensus 13 ~~k~viFDlDGTL~d~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-~~~-~~~~~~---~~- 85 (298)
.+++|||||||||+|+...+. .++.. +.++.|++...... .....|.+..... .+. ...+.. .+
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~-----l~~e~G~~~~~~e~----~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~ 200 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLT-----LAQEEGKSPPPAFI----LRRVEGMKNEQAISEVLCWSRDPAELRRMA 200 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHH-----HHHHcCCCCCHHHH----HHHhcCCCHHHHHHHHhhccCCHHHHHHHH
Confidence 589999999999999877444 45553 45566775443221 2233455443321 111 111111 11
Q ss_pred ---HHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360 86 ---HSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD 159 (298)
Q Consensus 86 ---~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~ 159 (298)
...+... ......++||+.++|+.|+ ++++|+|++....++..++++|+.+||+.+++++++..
T Consensus 201 ~~~~~~y~~~-~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~--------- 270 (381)
T PLN02575 201 TRKEEIYQAL-QGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYR--------- 270 (381)
T ss_pred HHHHHHHHHH-hccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCC---------
Confidence 2222111 1134678999999999984 78999999999999999999999999999999988764
Q ss_pred hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360 160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG 239 (298)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a 239 (298)
.||+|++|..+++++|++|++|++|||+.+||++|
T Consensus 271 ---------------------------------------------~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAA 305 (381)
T PLN02575 271 ---------------------------------------------GKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAA 305 (381)
T ss_pred ---------------------------------------------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHH
Confidence 79999999999999999999999999999999999
Q ss_pred HHcCCeEEEecCCCC---CCCCCEEeCCHHHHHHHhHHhhccCcccccCC
Q 022360 240 KRVGLDTVLIGKSQR---VKGADYAFESIHNIKEAIPELWESDMKSEVGY 286 (298)
Q Consensus 240 ~~aG~~~v~v~~~~~---~~~ad~i~~s~~~l~~~l~~~~~~~~~~~~~~ 286 (298)
+++|+.++++.++.. ...++++++++.+|.-..-+-+.....++.|.
T Consensus 306 k~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~~l~~l~~~~~~~~~~ 355 (381)
T PLN02575 306 HDARMKCVAVASKHPIYELGAADLVVRRLDELSIVDLKNLADIESPEFGP 355 (381)
T ss_pred HHcCCEEEEECCCCChhHhcCCCEEECCHHHHHHHHHhhhhhcCccccCC
Confidence 999999999976542 34589999999998654445444444455555
No 18
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.91 E-value=2e-23 Score=183.43 Aligned_cols=202 Identities=21% Similarity=0.252 Sum_probs=148.0
Q ss_pred ccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHH-----HccCCCChh
Q 022360 9 MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLR-----AIGYDFDYD 83 (298)
Q Consensus 9 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~ 83 (298)
|+.+++++|+||+||||+++...+..++.. +.+..|.+......+. ...|.....+. ..+...+.+
T Consensus 1 ~~~~~~~~iiFD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~ 71 (226)
T PRK13222 1 MKFMDIRAVAFDLDGTLVDSAPDLAAAVNA-----ALAALGLPPAGEERVR----TWVGNGADVLVERALTWAGREPDEE 71 (226)
T ss_pred CCCCcCcEEEEcCCcccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHH----HHhCccHHHHHHHHHhhccCCccHH
Confidence 566779999999999999987766666654 3444566432222221 12232222211 111122222
Q ss_pred hH-------HHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCC
Q 022360 84 DY-------HSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHK 153 (298)
Q Consensus 84 ~~-------~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~ 153 (298)
.+ ...+.... .....++||+.++|+.++ ++++++|++....++..++++++..+|+.+++.++.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--- 147 (226)
T PRK13222 72 LLEKLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPN--- 147 (226)
T ss_pred HHHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCC---
Confidence 22 22222211 124678999999999885 67899999999999999999999999999888776554
Q ss_pred CCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc
Q 022360 154 NTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV 233 (298)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~ 233 (298)
.||+|+++..++++++++|++|++|||+.
T Consensus 148 ---------------------------------------------------~kp~~~~~~~~~~~~~~~~~~~i~igD~~ 176 (226)
T PRK13222 148 ---------------------------------------------------KKPDPAPLLLACEKLGLDPEEMLFVGDSR 176 (226)
T ss_pred ---------------------------------------------------CCcChHHHHHHHHHcCCChhheEEECCCH
Confidence 69999999999999999999999999999
Q ss_pred cchHHHHHcCCeEEEecCCCC------CCCCCEEeCCHHHHHHHhHH
Q 022360 234 RNIQAGKRVGLDTVLIGKSQR------VKGADYAFESIHNIKEAIPE 274 (298)
Q Consensus 234 ~Di~~a~~aG~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~ 274 (298)
+|+++|+++|+.++++.++.. ...+++++.++.+|..+|.+
T Consensus 177 ~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~ 223 (226)
T PRK13222 177 NDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGL 223 (226)
T ss_pred HHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHH
Confidence 999999999999999977643 34689999999999988765
No 19
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.91 E-value=2.4e-23 Score=182.52 Aligned_cols=199 Identities=26% Similarity=0.320 Sum_probs=143.0
Q ss_pred ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHH--H---HHHHHHHHh--CC-CHHH---------HHHc
Q 022360 14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIE--D---LGNLLYKNY--GT-TMAG---------LRAI 76 (298)
Q Consensus 14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~---~~~~~~~~~--g~-~~~~---------~~~~ 76 (298)
+|+|+||+||||+|+...+..++.+. .++.|++..... . .....+..+ +. .... ....
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRLL-----FEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEY 75 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHHH-----HHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 58999999999999888777666643 334555432111 0 011112222 11 1110 1122
Q ss_pred cCCCChhhHHHHhhcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCC
Q 022360 77 GYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKN 154 (298)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~ 154 (298)
+.....+.+.+.+.... .....++||+.++|+.++ .+++|+||+....++..++.+++..+|+.++++++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~---- 150 (224)
T TIGR02254 76 NTEADEALLNQKYLRFL-EEGHQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGI---- 150 (224)
T ss_pred CCCCcHHHHHHHHHHHH-hccCeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCC----
Confidence 22222222333222211 134578999999999886 67899999999999999999999999999999987765
Q ss_pred CCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHc-CCCCCcEEEEcCCc
Q 022360 155 TVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIA-SINPQRTLFFEDSV 233 (298)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l-~i~p~~~i~iGDs~ 233 (298)
.||+|.++.++++++ +++|++|++|||+.
T Consensus 151 --------------------------------------------------~KP~~~~~~~~~~~~~~~~~~~~v~igD~~ 180 (224)
T TIGR02254 151 --------------------------------------------------QKPDKEIFNYALERMPKFSKEEVLMIGDSL 180 (224)
T ss_pred --------------------------------------------------CCCCHHHHHHHHHHhcCCCchheEEECCCc
Confidence 799999999999999 99999999999998
Q ss_pred -cchHHHHHcCCeEEEecCCC----CCCCCCEEeCCHHHHHHHh
Q 022360 234 -RNIQAGKRVGLDTVLIGKSQ----RVKGADYAFESIHNIKEAI 272 (298)
Q Consensus 234 -~Di~~a~~aG~~~v~v~~~~----~~~~ad~i~~s~~~l~~~l 272 (298)
+|+++|+++|+.++++.++. ....+++++.++.+|.++|
T Consensus 181 ~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 181 TADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred HHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHhhC
Confidence 89999999999999997653 2346789999999988764
No 20
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.91 E-value=5.7e-23 Score=186.63 Aligned_cols=197 Identities=18% Similarity=0.245 Sum_probs=145.7
Q ss_pred CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-HHccCCC-Ch----hhHH
Q 022360 13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-RAIGYDF-DY----DDYH 86 (298)
Q Consensus 13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~-~~----~~~~ 86 (298)
++++++|||||||+|+.+.+..++.. ..+++|++....+.. ....+...... ...+.+. .. ..+.
T Consensus 61 ~~k~vIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~~~~~~~~----~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 131 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSLPTVVAIANA-----HAPDFGYDPIDERDY----AQLRQWSSRTIVRRAGLSPWQQARLLQRVQ 131 (273)
T ss_pred hcCEEEECCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHHhCccHHHHHHHcCCCHHHHHHHHHHHH
Confidence 58999999999999988888777775 445566643222111 11122222222 2222210 11 1222
Q ss_pred HHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhH
Q 022360 87 SFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDI 163 (298)
Q Consensus 87 ~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 163 (298)
+.+.. ......++||+.++|+.|+ ++++|+|++....++..++++|+.++|+.+++.++.
T Consensus 132 ~~~~~--~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~--------------- 194 (273)
T PRK13225 132 RQLGD--CLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI--------------- 194 (273)
T ss_pred HHHHh--hcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC---------------
Confidence 22222 1345788999999999985 789999999999999999999999999988765432
Q ss_pred HHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC
Q 022360 164 AFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG 243 (298)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG 243 (298)
++++..+..++++++++|++|++|||+.+|+++|+++|
T Consensus 195 ------------------------------------------~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG 232 (273)
T PRK13225 195 ------------------------------------------LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVG 232 (273)
T ss_pred ------------------------------------------CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCC
Confidence 34568899999999999999999999999999999999
Q ss_pred CeEEEecCCCC------CCCCCEEeCCHHHHHHHhHHhhc
Q 022360 244 LDTVLIGKSQR------VKGADYAFESIHNIKEAIPELWE 277 (298)
Q Consensus 244 ~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~~~~ 277 (298)
+.++++.++.. ...|+++++++.+|.+++.++++
T Consensus 233 ~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~~~~~ 272 (273)
T PRK13225 233 LIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVTQLMR 272 (273)
T ss_pred CeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHHHHhc
Confidence 99999987643 45799999999999999888764
No 21
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.91 E-value=5.9e-23 Score=181.45 Aligned_cols=202 Identities=18% Similarity=0.224 Sum_probs=140.5
Q ss_pred CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCC-----HHHH-HHccCCCChhhHH
Q 022360 13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTT-----MAGL-RAIGYDFDYDDYH 86 (298)
Q Consensus 13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~-----~~~~-~~~~~~~~~~~~~ 86 (298)
++|+|||||||||+|+... ...+.....+.+.+..|.+...........+...... ...+ ...+.. ...+.
T Consensus 9 ~~k~vIFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 85 (224)
T PRK14988 9 DVDTVLLDMDGTLLDLAFD-NYFWQKLVPETLGAQRGISPQEAQEYIRQEYHAVQHTLNWYCLDYWSERLGLD--ICAMT 85 (224)
T ss_pred cCCEEEEcCCCCccchhhh-chHHHhhHHHHHHHHhCcCHHHHHHHHHHHHHHHcCccceecHHHHHHHhCCC--HHHHH
Confidence 4789999999999995311 2233333333455677776543322211111111111 1111 111111 11111
Q ss_pred HHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhH
Q 022360 87 SFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDI 163 (298)
Q Consensus 87 ~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 163 (298)
. . ......++||+.++|+.|+ ++++|+||+....++..++++++.++|+.++++++.+.
T Consensus 86 ~---~--~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~------------- 147 (224)
T PRK14988 86 T---E--QGPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGY------------- 147 (224)
T ss_pred H---H--HhccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCC-------------
Confidence 1 1 1244788999999999985 67999999999999999999999999999999988765
Q ss_pred HHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC
Q 022360 164 AFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG 243 (298)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG 243 (298)
.||+|+.|..+++++|++|++|++|||+.+|+++|+++|
T Consensus 148 -----------------------------------------~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG 186 (224)
T PRK14988 148 -----------------------------------------PKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFG 186 (224)
T ss_pred -----------------------------------------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcC
Confidence 799999999999999999999999999999999999999
Q ss_pred CeE-EEecCCCC--CCCCCEEeCCHHHHHHHhHHhh
Q 022360 244 LDT-VLIGKSQR--VKGADYAFESIHNIKEAIPELW 276 (298)
Q Consensus 244 ~~~-v~v~~~~~--~~~ad~i~~s~~~l~~~l~~~~ 276 (298)
+.+ +++..+.. ...+.....+++++.+++..+.
T Consensus 187 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (224)
T PRK14988 187 IRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM 222 (224)
T ss_pred CeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhhc
Confidence 985 56655443 3456667788888888777653
No 22
>PRK09449 dUMP phosphatase; Provisional
Probab=99.91 E-value=9.1e-23 Score=179.48 Aligned_cols=123 Identities=24% Similarity=0.304 Sum_probs=108.3
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360 97 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 174 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (298)
...++||+.++|+.|+ ++++|+||+....++..++++|+.++|+.++++++.+.
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~------------------------ 148 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGV------------------------ 148 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCC------------------------
Confidence 3678999999999986 77899999999999999999999999999999988775
Q ss_pred CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCc-cchHHHHHcCCeEEEecCC
Q 022360 175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN-PQRTLFFEDSV-RNIQAGKRVGLDTVLIGKS 252 (298)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~-p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~ 252 (298)
.||+|++|..+++++|+. +++|++|||+. +|+++|+++|+.++++.++
T Consensus 149 ------------------------------~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~ 198 (224)
T PRK09449 149 ------------------------------AKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAH 198 (224)
T ss_pred ------------------------------CCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCC
Confidence 799999999999999985 47899999998 7999999999999999643
Q ss_pred -CC---CCCCCEEeCCHHHHHHHhH
Q 022360 253 -QR---VKGADYAFESIHNIKEAIP 273 (298)
Q Consensus 253 -~~---~~~ad~i~~s~~~l~~~l~ 273 (298)
.. ...+++++.++.+|.+++.
T Consensus 199 ~~~~~~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 199 GREQPEGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred CCCCCCCCCCeEEECCHHHHHHHHh
Confidence 21 2458999999999988764
No 23
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.90 E-value=1.9e-22 Score=183.29 Aligned_cols=199 Identities=22% Similarity=0.265 Sum_probs=145.5
Q ss_pred CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHH-c-c-----CCCCh---
Q 022360 13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRA-I-G-----YDFDY--- 82 (298)
Q Consensus 13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~-~-~-----~~~~~--- 82 (298)
.+|+|+|||||||+|+.+.+..++.. +.+..|.+....... ....|.....+.. . . ...+.
T Consensus 12 ~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 82 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPDLAAAVDR-----MLLELGRPPAGLEAV----RHWVGNGAPVLVRRALAGSIDHDGVDDELA 82 (272)
T ss_pred cCCEEEEcCCCccccCHHHHHHHHHH-----HHHHcCCCCCCHHHH----HHHhChhHHHHHHHHhcccccccCCCHHHH
Confidence 36899999999999988887777764 455667654332221 1222333222211 0 0 01111
Q ss_pred hhHHHHhhccc--CCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCC
Q 022360 83 DDYHSFVHGRL--PYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVS 157 (298)
Q Consensus 83 ~~~~~~~~~~~--~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~ 157 (298)
+.+...+.+.. ......++||+.++|+.|+ ++++|+||+....++..++++++..+|+.++++++.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~------- 155 (272)
T PRK13223 83 EQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQ------- 155 (272)
T ss_pred HHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCC-------
Confidence 11112111111 1134578999999999884 68999999999999999999999999999988876653
Q ss_pred CChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchH
Q 022360 158 DDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQ 237 (298)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~ 237 (298)
.||+|+.++.+++++|++|++|++|||+.+|++
T Consensus 156 -----------------------------------------------~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~ 188 (272)
T PRK13223 156 -----------------------------------------------KKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVL 188 (272)
T ss_pred -----------------------------------------------CCCCcHHHHHHHHHhCCChhHEEEECCCHHHHH
Confidence 699999999999999999999999999999999
Q ss_pred HHHHcCCeEEEecCCCC------CCCCCEEeCCHHHHHHHhHH
Q 022360 238 AGKRVGLDTVLIGKSQR------VKGADYAFESIHNIKEAIPE 274 (298)
Q Consensus 238 ~a~~aG~~~v~v~~~~~------~~~ad~i~~s~~~l~~~l~~ 274 (298)
+|+++|+.++++.++.. ...++++++++.+|.+.+..
T Consensus 189 aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~~~~ 231 (272)
T PRK13223 189 AAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPGCAD 231 (272)
T ss_pred HHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHHHhc
Confidence 99999999999977642 35799999999999876553
No 24
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.90 E-value=8.1e-23 Score=179.74 Aligned_cols=124 Identities=27% Similarity=0.428 Sum_probs=113.8
Q ss_pred CCCCChhHHHHHHhCCCc--EEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360 97 NLKPDPVLRSLLLSLPLR--KIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 174 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l~~~--~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (298)
..+++|++.++|+.++.+ ++|+||+....+...++++|+.++||.++++++.+.
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~------------------------ 152 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGV------------------------ 152 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEeccccc------------------------
Confidence 478999999999999865 999999999999999999999999999999999986
Q ss_pred CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCC
Q 022360 175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~ 253 (298)
.||+|.+|+.+++++|++|++|++|||+. |||.+|+++||.++++..+.
T Consensus 153 ------------------------------~KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~ 202 (229)
T COG1011 153 ------------------------------AKPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGG 202 (229)
T ss_pred ------------------------------CCCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCC
Confidence 79999999999999999999999999998 88899999999999997765
Q ss_pred C-----CCCCCEEeCCHHHHHHHhHH
Q 022360 254 R-----VKGADYAFESIHNIKEAIPE 274 (298)
Q Consensus 254 ~-----~~~ad~i~~s~~~l~~~l~~ 274 (298)
. ...+++.+.++.+|.+.+..
T Consensus 203 ~~~~~~~~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 203 KPLPDALEAPDYEISSLAELLDLLER 228 (229)
T ss_pred CCCCCCccCCceEEcCHHHHHHHHhh
Confidence 3 25789999999999988764
No 25
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.90 E-value=5.7e-23 Score=181.21 Aligned_cols=196 Identities=26% Similarity=0.328 Sum_probs=142.4
Q ss_pred CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCC----HHHHHHccCC---CChhhH
Q 022360 13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTT----MAGLRAIGYD---FDYDDY 85 (298)
Q Consensus 13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~---~~~~~~ 85 (298)
++++|||||||||+|+...+..+|.+ +.+++|+....... ....|.. ...+...... .+....
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLE-----ALKEYGIEISDEEI-----RELHGGGIARIIDLLRKLAAGEDPADLAEL 70 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHHCCChHHHHHHHHHHhcCCcccCHHHH
Confidence 37899999999999998888888886 45557876544211 2222321 1111111111 111111
Q ss_pred HHHhh--cccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCCh
Q 022360 86 HSFVH--GRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDE 160 (298)
Q Consensus 86 ~~~~~--~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~ 160 (298)
..... .........+.||+.++|+.|+ +++++.|++....++..++.+|+.++|+.+++++++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~---------- 140 (221)
T COG0637 71 ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVAR---------- 140 (221)
T ss_pred HHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhc----------
Confidence 11111 1112356899999999999997 77889999999999999999999999999999987764
Q ss_pred hhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHH
Q 022360 161 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGK 240 (298)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~ 240 (298)
+||+|+.|..+++++|++|++|++|+|+.++|++|+
T Consensus 141 --------------------------------------------~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~ 176 (221)
T COG0637 141 --------------------------------------------GKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAK 176 (221)
T ss_pred --------------------------------------------CCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHH
Confidence 799999999999999999999999999999999999
Q ss_pred HcCCeEEEecCCCC--------CCCCCEEeCCHHHHHHHh
Q 022360 241 RVGLDTVLIGKSQR--------VKGADYAFESIHNIKEAI 272 (298)
Q Consensus 241 ~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l~~~l 272 (298)
++||.++.+..+.. ...++....++.++...+
T Consensus 177 aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 216 (221)
T COG0637 177 AAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPALL 216 (221)
T ss_pred HCCCEEEEecCCCCccccchhhhhhcchhhccHHHHHHHH
Confidence 99999999976433 234455555555555444
No 26
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.90 E-value=4.9e-23 Score=176.17 Aligned_cols=174 Identities=18% Similarity=0.304 Sum_probs=127.3
Q ss_pred cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChhhHH
Q 022360 12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDDYH 86 (298)
Q Consensus 12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~ 86 (298)
.++++|+|||||||+|+...+..++... .++.|++.... ......|.+.... ...+...+.+.+.
T Consensus 3 ~~~~~viFD~DGTLiDs~~~~~~a~~~~-----~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (188)
T PRK10725 3 DRYAGLIFDMDGTILDTEPTHRKAWREV-----LGRYGLQFDEQ-----AMVALNGSPTWRIAQAIIELNQADLDPHALA 72 (188)
T ss_pred CcceEEEEcCCCcCccCHHHHHHHHHHH-----HHHcCCCCCHH-----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence 3479999999999999988778777753 34456643221 1122233332211 1122233333322
Q ss_pred HHh---hcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChh
Q 022360 87 SFV---HGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDED 161 (298)
Q Consensus 87 ~~~---~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~ 161 (298)
... ..........++|+ .++|..|+ .+++|+||+....++..++++++.+||+.++++++.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~----------- 140 (188)
T PRK10725 73 REKTEAVKSMLLDSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQH----------- 140 (188)
T ss_pred HHHHHHHHHHHhccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccC-----------
Confidence 211 11122345567786 57888875 67899999999999999999999999999999988765
Q ss_pred hHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHH
Q 022360 162 DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR 241 (298)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~ 241 (298)
.||+|+.+..++++++++|++|++|||+.+|+++|++
T Consensus 141 -------------------------------------------~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~ 177 (188)
T PRK10725 141 -------------------------------------------HKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARA 177 (188)
T ss_pred -------------------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHH
Confidence 7999999999999999999999999999999999999
Q ss_pred cCCeEEEec
Q 022360 242 VGLDTVLIG 250 (298)
Q Consensus 242 aG~~~v~v~ 250 (298)
+|+.++++.
T Consensus 178 aG~~~i~~~ 186 (188)
T PRK10725 178 AGMDAVDVR 186 (188)
T ss_pred CCCEEEeec
Confidence 999999874
No 27
>PLN02940 riboflavin kinase
Probab=99.89 E-value=9.3e-23 Score=193.51 Aligned_cols=194 Identities=22% Similarity=0.286 Sum_probs=146.0
Q ss_pred CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChhhHHH
Q 022360 13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDDYHS 87 (298)
Q Consensus 13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~ 87 (298)
.+++|+||+||||+|+.+.+..++.. +.++.|+...... .....|.+.... ...+.+...+.+..
T Consensus 10 ~ik~VIFDlDGTLvDt~~~~~~a~~~-----~~~~~G~~~~~~~-----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (382)
T PLN02940 10 LVSHVILDLDGTLLNTDGIVSDVLKA-----FLVKYGKQWDGRE-----AQKIVGKTPLEAAATVVEDYGLPCSTDEFNS 79 (382)
T ss_pred cCCEEEECCcCcCCcCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHhcCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence 48999999999999998888877775 4455676543321 122334332221 22233333333322
Q ss_pred Hhhccc--CCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHH-HhCCCCccceeEeecCCCCCCCCCCCCChh
Q 022360 88 FVHGRL--PYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLS-RLGLEDCFEGIICFETLNPTHKNTVSDDED 161 (298)
Q Consensus 88 ~~~~~~--~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~-~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~ 161 (298)
...... ......++||+.++|+.|+ ++++|+||+....+...++ ++++.++|+.++++++++.
T Consensus 80 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~----------- 148 (382)
T PLN02940 80 EITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEK----------- 148 (382)
T ss_pred HHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCC-----------
Confidence 221110 1235678999999999885 7799999999998888886 7899999999999988764
Q ss_pred hHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHH
Q 022360 162 DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR 241 (298)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~ 241 (298)
+||+|+.+..++++++++|++|++|||+.+|+++|++
T Consensus 149 -------------------------------------------~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~ 185 (382)
T PLN02940 149 -------------------------------------------GKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKA 185 (382)
T ss_pred -------------------------------------------CCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHH
Confidence 7999999999999999999999999999999999999
Q ss_pred cCCeEEEecCCC----CCCCCCEEeCCHHHHHH
Q 022360 242 VGLDTVLIGKSQ----RVKGADYAFESIHNIKE 270 (298)
Q Consensus 242 aG~~~v~v~~~~----~~~~ad~i~~s~~~l~~ 270 (298)
+|+.++++.++. ....++++++++.++..
T Consensus 186 aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~ 218 (382)
T PLN02940 186 AGMEVIAVPSIPKQTHLYSSADEVINSLLDLQP 218 (382)
T ss_pred cCCEEEEECCCCcchhhccCccEEeCCHhHcCH
Confidence 999999997754 24678999999998753
No 28
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.89 E-value=1.2e-21 Score=174.67 Aligned_cols=200 Identities=16% Similarity=0.154 Sum_probs=135.0
Q ss_pred cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCC---ChhHHHHHHHHHHHH-----------hCCCH-HHHHHc
Q 022360 12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGI---ERSKIEDLGNLLYKN-----------YGTTM-AGLRAI 76 (298)
Q Consensus 12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~-----------~g~~~-~~~~~~ 76 (298)
.++|+|+||+||||+|+...+..++...+..+.....++ .......+...+... .+... ..+...
T Consensus 8 ~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 87 (238)
T PRK10748 8 GRISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLDA 87 (238)
T ss_pred CCceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHHc
Confidence 357899999999999998888887776554321110011 011111111111000 00001 111223
Q ss_pred cCCCChh-----hHHHHhhcccCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCC
Q 022360 77 GYDFDYD-----DYHSFVHGRLPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLN 149 (298)
Q Consensus 77 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~ 149 (298)
+...+.. .....+.. ......++||+.++|+.|+ ++++++||+... ++++|+.++|+.++++++.+
T Consensus 88 g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~ 160 (238)
T PRK10748 88 GLSAEEASAGADAAMINFAK--WRSRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHG 160 (238)
T ss_pred CCCHHHHHHHHHHHHHHHHH--HhhcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCC
Confidence 3322111 11111211 1134688999999999986 678999998765 47789999999999998776
Q ss_pred CCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 022360 150 PTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFF 229 (298)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~i 229 (298)
. .||+|++|..+++++|++|++|++|
T Consensus 161 ~------------------------------------------------------~KP~p~~~~~a~~~~~~~~~~~~~V 186 (238)
T PRK10748 161 R------------------------------------------------------SKPFSDMYHLAAEKLNVPIGEILHV 186 (238)
T ss_pred c------------------------------------------------------CCCcHHHHHHHHHHcCCChhHEEEE
Confidence 5 6999999999999999999999999
Q ss_pred cCCc-cchHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHHHHHh
Q 022360 230 EDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNIKEAI 272 (298)
Q Consensus 230 GDs~-~Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l~~~l 272 (298)
||+. +|+.+|+++|+.++++.++.. ...+++.+.++.+|.++|
T Consensus 187 GD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 187 GDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred cCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhhC
Confidence 9995 999999999999999966432 245889999999988764
No 29
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.88 E-value=3.1e-22 Score=194.42 Aligned_cols=205 Identities=13% Similarity=0.155 Sum_probs=146.7
Q ss_pred ccccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHH-hCCChhHHHHHHHHHHHHhCCCHHHH-HHccCCCC---hh
Q 022360 9 MAAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEK-LGIERSKIEDLGNLLYKNYGTTMAGL-RAIGYDFD---YD 83 (298)
Q Consensus 9 ~~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~---~~ 83 (298)
...+++++|+|||||||+|+...+..++.+.+.++.... .+.... .. .+....|.+.... ..+..... .+
T Consensus 236 ~~~~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~-~~----~~~~~~G~~~~~~~~~l~~~~~~~~~~ 310 (459)
T PRK06698 236 GENEMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTP-ID----KYREIMGVPLPKVWEALLPDHSLEIRE 310 (459)
T ss_pred chHHhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCC-HH----HHHHHcCCChHHHHHHHhhhcchhHHH
Confidence 334668999999999999999999999998777642211 111111 11 1222334433322 11111111 11
Q ss_pred h----HHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCC
Q 022360 84 D----YHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTV 156 (298)
Q Consensus 84 ~----~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~ 156 (298)
. +.+.+.+.+......++||+.++|+.|+ ++++|+|++....++..++++++.+||+.++++++..
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~------- 383 (459)
T PRK06698 311 QTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN------- 383 (459)
T ss_pred HHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-------
Confidence 1 2222222111234688999999998884 7899999999999999999999999999999987653
Q ss_pred CCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccch
Q 022360 157 SDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNI 236 (298)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di 236 (298)
.||||+.+..++++++ |++|++|||+.+|+
T Consensus 384 ------------------------------------------------~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di 413 (459)
T PRK06698 384 ------------------------------------------------SLNKSDLVKSILNKYD--IKEAAVVGDRLSDI 413 (459)
T ss_pred ------------------------------------------------CCCCcHHHHHHHHhcC--cceEEEEeCCHHHH
Confidence 3677789999998865 68999999999999
Q ss_pred HHHHHcCCeEEEecCCC----CCCCCCEEeCCHHHHHHHhHHh
Q 022360 237 QAGKRVGLDTVLIGKSQ----RVKGADYAFESIHNIKEAIPEL 275 (298)
Q Consensus 237 ~~a~~aG~~~v~v~~~~----~~~~ad~i~~s~~~l~~~l~~~ 275 (298)
.+|+++|+.++++.++. ....++++++++.+|.+++..+
T Consensus 414 ~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~~ 456 (459)
T PRK06698 414 NAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILSTV 456 (459)
T ss_pred HHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence 99999999999997754 2356899999999999887654
No 30
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.88 E-value=9e-22 Score=170.05 Aligned_cols=104 Identities=21% Similarity=0.407 Sum_probs=95.8
Q ss_pred CCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360 96 ENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 172 (298)
Q Consensus 96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (298)
....++||+.++|+.|+ ++++|+||++...++..++++|+.++|+.++++++.+.
T Consensus 89 ~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~---------------------- 146 (198)
T TIGR01428 89 LRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRA---------------------- 146 (198)
T ss_pred hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCC----------------------
Confidence 34678999999999885 67999999999999999999999999999999988775
Q ss_pred cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360 173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 252 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~ 252 (298)
.||+|++|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++
T Consensus 147 --------------------------------~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~ 194 (198)
T TIGR01428 147 --------------------------------YKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRP 194 (198)
T ss_pred --------------------------------CCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCC
Confidence 799999999999999999999999999999999999999999999765
Q ss_pred C
Q 022360 253 Q 253 (298)
Q Consensus 253 ~ 253 (298)
.
T Consensus 195 ~ 195 (198)
T TIGR01428 195 G 195 (198)
T ss_pred C
Confidence 4
No 31
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.87 E-value=2.3e-21 Score=165.18 Aligned_cols=170 Identities=21% Similarity=0.341 Sum_probs=121.8
Q ss_pred ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChhhHH--
Q 022360 14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDDYH-- 86 (298)
Q Consensus 14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~-- 86 (298)
+++|+||+||||+|+...+..++.. +.+..|.+... . ......|.+.... ...+...+.+.+.
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~--~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKH-----LADKYGIEFDK--Q---YNTSLGGLSREDILRAILKLRKPGLSLETIHQL 70 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHH-----HHHHcCCCCCH--H---HHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 5799999999999988777777765 34445655321 1 1111123322211 1111123333221
Q ss_pred -----HHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCC
Q 022360 87 -----SFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSD 158 (298)
Q Consensus 87 -----~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~ 158 (298)
..+...+......++||+.++|+.|+ .+++++|++ ..++..++++++.++|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~-------- 140 (185)
T TIGR02009 71 AERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKE-------- 140 (185)
T ss_pred HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCC--------
Confidence 12222111234788999999998874 678899988 668889999999999999998887664
Q ss_pred ChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHH
Q 022360 159 DEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQA 238 (298)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~ 238 (298)
.||+|+.+.+++++++++|++|++|||+.+|+++
T Consensus 141 ----------------------------------------------~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~a 174 (185)
T TIGR02009 141 ----------------------------------------------GKPHPETFLLAAELLGVSPNECVVFEDALAGVQA 174 (185)
T ss_pred ----------------------------------------------CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHH
Confidence 7999999999999999999999999999999999
Q ss_pred HHHcCCeEEEe
Q 022360 239 GKRVGLDTVLI 249 (298)
Q Consensus 239 a~~aG~~~v~v 249 (298)
|+++|+.++.+
T Consensus 175 A~~~G~~~i~v 185 (185)
T TIGR02009 175 ARAAGMFAVAV 185 (185)
T ss_pred HHHCCCeEeeC
Confidence 99999998864
No 32
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.87 E-value=2.6e-21 Score=176.95 Aligned_cols=199 Identities=20% Similarity=0.283 Sum_probs=132.3
Q ss_pred cCccEEEEeCCCCccCCC-ccHHHHHHHHHHHHHHHHhCCC-hhHHHHHHHHHHHHhCCCHHHH----HHccCC------
Q 022360 12 AKYDCLLFDLDDTLYPYS-SGIAAACGQNIKDYMVEKLGIE-RSKIEDLGNLLYKNYGTTMAGL----RAIGYD------ 79 (298)
Q Consensus 12 ~~~k~viFDlDGTL~d~~-~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~g~~~~~~----~~~~~~------ 79 (298)
..+++|||||||||+|+. ..+..++.+.+ +..|++ ..........+.. .|.....+ ...+..
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l-----~~~G~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 111 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERDGHRVAFNDAF-----KEFGLRPVEWDVELYDELLN-IGGGKERMTWYFNENGWPTSTIEK 111 (286)
T ss_pred cCCcEEEEeCceeEEccccHHHHHHHHHHH-----HHcCCCCCCCCHHHHHHHHc-cCCChHHHHHHHHHcCCCcccccc
Confidence 458999999999999998 77778887643 445662 1110110001111 22221111 001111
Q ss_pred --CChh-------hHH----HHhhcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccce--
Q 022360 80 --FDYD-------DYH----SFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEG-- 141 (298)
Q Consensus 80 --~~~~-------~~~----~~~~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~-- 141 (298)
.+.+ .+. ..+........+.++||+.++|..| +++++|+||+....+...++++....+|+.
T Consensus 112 ~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~ 191 (286)
T PLN02779 112 APKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLD 191 (286)
T ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceE
Confidence 0011 111 1111111112358899999999887 478999999999999988887744344432
Q ss_pred eEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCC
Q 022360 142 IICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASI 221 (298)
Q Consensus 142 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i 221 (298)
++++++.+. .||+|++|..+++++|+
T Consensus 192 ~v~~~~~~~------------------------------------------------------~KP~p~~~~~a~~~~~~ 217 (286)
T PLN02779 192 VFAGDDVPK------------------------------------------------------KKPDPDIYNLAAETLGV 217 (286)
T ss_pred EEeccccCC------------------------------------------------------CCCCHHHHHHHHHHhCc
Confidence 235555443 69999999999999999
Q ss_pred CCCcEEEEcCCccchHHHHHcCCeEEEecCCCC----CCCCCEEeCCHHHHHH
Q 022360 222 NPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR----VKGADYAFESIHNIKE 270 (298)
Q Consensus 222 ~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~----~~~ad~i~~s~~~l~~ 270 (298)
+|++|++|||+.+|+++|+++|+.++++.++.. ...++++++++.++..
T Consensus 218 ~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~ 270 (286)
T PLN02779 218 DPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPL 270 (286)
T ss_pred ChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcch
Confidence 999999999999999999999999999976542 3568999999999753
No 33
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.86 E-value=1.8e-21 Score=165.79 Aligned_cols=169 Identities=22% Similarity=0.268 Sum_probs=119.8
Q ss_pred EEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH-----HHHccCCCChhhHHHH--
Q 022360 16 CLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG-----LRAIGYDFDYDDYHSF-- 88 (298)
Q Consensus 16 ~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~-- 88 (298)
+|+||+||||+|+...+..++.. +.+..|++...... ....|.+... +...+...+.+.+...
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKA-----LADELGIPFDEEFN-----ESLKGVSREDSLERILDLGGKKYSEEEKEELAE 70 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHHHH-----HHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 58999999999998888777765 44555665332110 1112222111 1122333333222111
Q ss_pred -----hhcccC-CCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360 89 -----VHGRLP-YENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD 159 (298)
Q Consensus 89 -----~~~~~~-~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~ 159 (298)
+..... .....++||+.++|+.|+ ++++|+|++.. ....++++++..+|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~--------- 139 (185)
T TIGR01990 71 RKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKK--------- 139 (185)
T ss_pred HHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCC---------
Confidence 111110 123478999999999985 67889998654 4678999999999999999887764
Q ss_pred hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360 160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG 239 (298)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a 239 (298)
.||+|+.|..++++++++|++|++|||+.+|+++|
T Consensus 140 ---------------------------------------------~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA 174 (185)
T TIGR01990 140 ---------------------------------------------GKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAI 174 (185)
T ss_pred ---------------------------------------------CCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHH
Confidence 79999999999999999999999999999999999
Q ss_pred HHcCCeEEEec
Q 022360 240 KRVGLDTVLIG 250 (298)
Q Consensus 240 ~~aG~~~v~v~ 250 (298)
+++|+.+++++
T Consensus 175 ~~aG~~~i~v~ 185 (185)
T TIGR01990 175 KAAGMFAVGVG 185 (185)
T ss_pred HHcCCEEEecC
Confidence 99999999763
No 34
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.86 E-value=1.3e-20 Score=163.22 Aligned_cols=174 Identities=22% Similarity=0.277 Sum_probs=120.1
Q ss_pred cEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHH--HHHHHHHHH-------h----CCCHHH---------
Q 022360 15 DCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIE--DLGNLLYKN-------Y----GTTMAG--------- 72 (298)
Q Consensus 15 k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~-------~----g~~~~~--------- 72 (298)
|+|+||+||||+|+...+..++.. +.+..|++....+ ......+.. + |.+...
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 75 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCE-----IARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDT 75 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHH-----HHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHH
Confidence 589999999999988888888775 3445666543211 010011111 1 222110
Q ss_pred HHHccCCC--ChhhHHHHhhcc-cCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeec
Q 022360 73 LRAIGYDF--DYDDYHSFVHGR-LPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFE 146 (298)
Q Consensus 73 ~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~ 146 (298)
+...+... ....+...+... .......++||+.++|+.|+ ++++|+||+... ++..++++++..+|+.+++++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~ 154 (203)
T TIGR02252 76 FGRAGVPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSY 154 (203)
T ss_pred HHhcCCCCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeec
Confidence 11122110 111111111111 11133578999999999885 678999998765 577889999999999999998
Q ss_pred CCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 022360 147 TLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRT 226 (298)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~ 226 (298)
+.+. .||+|+.|.++++++|++|++|
T Consensus 155 ~~~~------------------------------------------------------~KP~~~~~~~~~~~~~~~~~~~ 180 (203)
T TIGR02252 155 EVGA------------------------------------------------------EKPDPKIFQEALERAGISPEEA 180 (203)
T ss_pred ccCC------------------------------------------------------CCCCHHHHHHHHHHcCCChhHE
Confidence 8775 7999999999999999999999
Q ss_pred EEEcCCc-cchHHHHHcCCeEEE
Q 022360 227 LFFEDSV-RNIQAGKRVGLDTVL 248 (298)
Q Consensus 227 i~iGDs~-~Di~~a~~aG~~~v~ 248 (298)
++|||+. +||++|+++|+.+++
T Consensus 181 ~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 181 LHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred EEECCCchHHHHHHHHcCCeeeC
Confidence 9999998 899999999999874
No 35
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.85 E-value=1.5e-21 Score=163.02 Aligned_cols=168 Identities=30% Similarity=0.484 Sum_probs=122.0
Q ss_pred EEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-----HHccCCCChhhHHHHhhc
Q 022360 17 LLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-----RAIGYDFDYDDYHSFVHG 91 (298)
Q Consensus 17 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~ 91 (298)
|+||+||||+++...+...+.. .+.+..+.+... . .+....+...... ...+.. ...+.+.+.+
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~----~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 69 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQR----LALEEFGLEISA-E----ELRELFGKSYEEALERLLERFGID--PEEIQELFRE 69 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHH----HHHHHTTHHHHH-H----HHHHHTTSHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred cEEECCCCcEeCHHHHHHHHHH----HHHHHhCCCCCH-H----HHHHHhCCCHHHHHHHhhhccchh--HHHHHHHhhh
Confidence 7999999999966645455443 345555554221 1 1111122221111 111111 2223232222
Q ss_pred ccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHh
Q 022360 92 RLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVES 168 (298)
Q Consensus 92 ~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (298)
........++||+.++|+.|+ ++++++|+.+...+...++++++..+|+.++++++.+.
T Consensus 70 ~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~------------------ 131 (176)
T PF13419_consen 70 YNLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGS------------------ 131 (176)
T ss_dssp HHHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSS------------------
T ss_pred hhhhhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhh------------------
Confidence 211245788999999999885 88999999999999999999999999999999988775
Q ss_pred hhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEE
Q 022360 169 AASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL 248 (298)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~ 248 (298)
.||++..|+.++++++++|++|++|||+..|+++|+++|+.+++
T Consensus 132 ------------------------------------~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~ 175 (176)
T PF13419_consen 132 ------------------------------------RKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIW 175 (176)
T ss_dssp ------------------------------------STTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEE
T ss_pred ------------------------------------hhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEe
Confidence 79999999999999999999999999999999999999999997
Q ss_pred e
Q 022360 249 I 249 (298)
Q Consensus 249 v 249 (298)
+
T Consensus 176 v 176 (176)
T PF13419_consen 176 V 176 (176)
T ss_dssp E
T ss_pred C
Confidence 5
No 36
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.84 E-value=8.3e-21 Score=161.00 Aligned_cols=97 Identities=34% Similarity=0.496 Sum_probs=87.8
Q ss_pred CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360 98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 174 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (298)
..++||+.++|+.|+ ++++++||+.... .....++++..+|+.++++++.+.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~------------------------ 138 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGR------------------------ 138 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCC------------------------
Confidence 688999999999874 6799999999888 666667999999999999887664
Q ss_pred CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360 175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 249 (298)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v 249 (298)
+||+|..+..++++++++|++|++|||+..|+.+|+++|+.++++
T Consensus 139 ------------------------------~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 139 ------------------------------GKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred ------------------------------CCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 799999999999999999999999999999999999999999864
No 37
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.83 E-value=8.4e-20 Score=157.68 Aligned_cols=183 Identities=15% Similarity=0.156 Sum_probs=119.3
Q ss_pred ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCC-ChhhHHHHhhcc
Q 022360 14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDF-DYDDYHSFVHGR 92 (298)
Q Consensus 14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~ 92 (298)
+|+|+|||||||+|+... +. .+.+..|++... ....+........... ++.+. ....+...+...
T Consensus 2 ~k~viFDlDGTLiD~~~~----~~-----~~~~~~g~~~~~---~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 67 (197)
T PHA02597 2 KPTILTDVDGVLLSWQSG----LP-----YFAQKYNIPTDH---ILKMIQDERFRDPGEL--FGCDQELAKKLIEKYNNS 67 (197)
T ss_pred CcEEEEecCCceEchhhc----cH-----HHHHhcCCCHHH---HHHHHhHhhhcCHHHH--hcccHHHHHHHhhhhhHH
Confidence 789999999999994432 22 244566775422 1111111111111111 11110 011111111111
Q ss_pred cCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCC----ccceeEeecCCCCCCCCCCCCChhhHHHH
Q 022360 93 LPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLED----CFEGIICFETLNPTHKNTVSDDEDDIAFV 166 (298)
Q Consensus 93 ~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~----~f~~i~~~~~~~~~~~~~~~~~~~~~~~~ 166 (298)
.......++||+.++|+.|+ .+.+++|+.........++.+++.. +|+.+++.++
T Consensus 68 ~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~------------------- 128 (197)
T PHA02597 68 DFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH------------------- 128 (197)
T ss_pred HHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc-------------------
Confidence 11244678999999999996 4577888877666666777777765 4556666553
Q ss_pred HhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc--CC
Q 022360 167 ESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV--GL 244 (298)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a--G~ 244 (298)
.||||+.+..+++++| |++|+||||+.+|+++|+++ |+
T Consensus 129 --------------------------------------~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi 168 (197)
T PHA02597 129 --------------------------------------DESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQL 168 (197)
T ss_pred --------------------------------------CcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCC
Confidence 3677899999999999 88899999999999999999 99
Q ss_pred eEEEecCCCC--CCCCCEEeCCHHHHH
Q 022360 245 DTVLIGKSQR--VKGADYAFESIHNIK 269 (298)
Q Consensus 245 ~~v~v~~~~~--~~~ad~i~~s~~~l~ 269 (298)
.++++.++.. ...+++.+.|+.|+.
T Consensus 169 ~~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 169 PVIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cEEEecchhhccccchhhhhccHHHHh
Confidence 9999988864 335678888888775
No 38
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.82 E-value=1.7e-19 Score=189.88 Aligned_cols=193 Identities=21% Similarity=0.299 Sum_probs=143.9
Q ss_pred cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHH-----HccC-CCChhh-
Q 022360 12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLR-----AIGY-DFDYDD- 84 (298)
Q Consensus 12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~-~~~~~~- 84 (298)
+++++|+|||||||+|+...+..++.+ +.++.|++..... +....|.....+. ..+. ..+.+.
T Consensus 73 ~~ikaVIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~it~e~-----~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~ 142 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSEEPSRRAAVD-----VFAEMGVEVTVED-----FVPFMGTGEANFLGGVASVKGVKGFDPDAA 142 (1057)
T ss_pred CCCCEEEECCCCCeEeChHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHhCCCHHHHHHHHHHhcCCCCCCHHHH
Confidence 468999999999999998888877775 3445676543211 1223344433221 1111 122222
Q ss_pred ---HHHHhhcccC-CCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCC-CccceeEeecCCCCCCCCCC
Q 022360 85 ---YHSFVHGRLP-YENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLE-DCFEGIICFETLNPTHKNTV 156 (298)
Q Consensus 85 ---~~~~~~~~~~-~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~-~~f~~i~~~~~~~~~~~~~~ 156 (298)
+...+..... .....++||+.++|+.|+ ++++|+|+.....++..++++++. .+|+.+++.++++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~------ 216 (1057)
T PLN02919 143 KKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFEN------ 216 (1057)
T ss_pred HHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccccc------
Confidence 2221111111 112347999999999985 789999999999999999999996 78999999987764
Q ss_pred CCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccch
Q 022360 157 SDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNI 236 (298)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di 236 (298)
.||+|++|..++++++++|++|++|||+.+|+
T Consensus 217 ------------------------------------------------~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di 248 (1057)
T PLN02919 217 ------------------------------------------------LKPAPDIFLAAAKILGVPTSECVVIEDALAGV 248 (1057)
T ss_pred ------------------------------------------------CCCCHHHHHHHHHHcCcCcccEEEEcCCHHHH
Confidence 79999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCCCC-----CCCCCEEeCCHHHH
Q 022360 237 QAGKRVGLDTVLIGKSQR-----VKGADYAFESIHNI 268 (298)
Q Consensus 237 ~~a~~aG~~~v~v~~~~~-----~~~ad~i~~s~~~l 268 (298)
++|+++||.++++.++.. ...++++++++.++
T Consensus 249 ~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 249 QAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred HHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 999999999999987643 46789999999996
No 39
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.82 E-value=2.2e-19 Score=157.42 Aligned_cols=199 Identities=17% Similarity=0.223 Sum_probs=126.1
Q ss_pred cccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-H-Hcc--CCCChhhH
Q 022360 10 AAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-R-AIG--YDFDYDDY 85 (298)
Q Consensus 10 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~-~~~--~~~~~~~~ 85 (298)
.+.++++++|||||||+++.. +. .+.+..|.+.... ........ -..+.... . ... ...+.+.+
T Consensus 10 ~~~~~k~iiFD~DGTL~~~~~-----~~-----~l~~~~g~~~~~~-~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 77 (219)
T TIGR00338 10 LLRSKKLVVFDMDSTLINAET-----ID-----EIAKIAGVEEEVS-EITERAMR-GELDFKASLRERVALLKGLPVELL 77 (219)
T ss_pred hhccCCEEEEeCcccCCCchH-----HH-----HHHHHhCCHHHHH-HHHHHHHc-CCCCHHHHHHHHHHHhCCCCHHHH
Confidence 345678999999999999632 22 1344455532221 11111111 01111111 0 110 12223333
Q ss_pred HHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhh
Q 022360 86 HSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDD 162 (298)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~ 162 (298)
.... ....++||+.++|+.|+ .+++|+|++....++..++.+++..+|+..+..++...
T Consensus 78 ~~~~------~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~------------ 139 (219)
T TIGR00338 78 KEVR------ENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKL------------ 139 (219)
T ss_pred HHHH------hcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEE------------
Confidence 3332 23568999999998874 77999999999999999999999988876554432110
Q ss_pred HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360 163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 242 (298)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a 242 (298)
.+...++ +..++||+..++.++++++++|++|++|||+.+|+.+|+.+
T Consensus 140 ----------------------~~~~~~~----------~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~a 187 (219)
T TIGR00338 140 ----------------------TGLVEGP----------IVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAA 187 (219)
T ss_pred ----------------------EEEecCc----------ccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhC
Confidence 0000000 00157789999999999999999999999999999999999
Q ss_pred CCeEEEecCCCCCCCCCEEeCC--HHHHHH
Q 022360 243 GLDTVLIGKSQRVKGADYAFES--IHNIKE 270 (298)
Q Consensus 243 G~~~v~v~~~~~~~~ad~i~~s--~~~l~~ 270 (298)
|+.+++.+.......|++++.+ +.++..
T Consensus 188 g~~i~~~~~~~~~~~a~~~i~~~~~~~~~~ 217 (219)
T TIGR00338 188 GLGIAFNAKPKLQQKADICINKKDLTDILP 217 (219)
T ss_pred CCeEEeCCCHHHHHhchhccCCCCHHHHHh
Confidence 9998764444346788898774 445443
No 40
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.82 E-value=2.4e-19 Score=156.39 Aligned_cols=101 Identities=18% Similarity=0.257 Sum_probs=86.0
Q ss_pred CCCCChhHHHHHHhCC---CcEEEEeCCChHH--HHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360 97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVH--AVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAS 171 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~--~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (298)
...++||+.++|+.|+ ++++|+||+.... ....+..+++..+|+.++++++.+.
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~--------------------- 150 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGL--------------------- 150 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCC---------------------
Confidence 4678999999999885 7889999986543 3333445678889999999887765
Q ss_pred ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360 172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK 251 (298)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~ 251 (298)
.||+|.+|..+++++|++|++|++|||+..|+.+|+++|+.++++.+
T Consensus 151 ---------------------------------~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 151 ---------------------------------RKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred ---------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 79999999999999999999999999999999999999999996644
No 41
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.81 E-value=1e-18 Score=151.29 Aligned_cols=119 Identities=16% Similarity=0.346 Sum_probs=96.4
Q ss_pred ccCCCChhhHHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHH-hCCCCccceeEeecCCCCC
Q 022360 76 IGYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSR-LGLEDCFEGIICFETLNPT 151 (298)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~-l~l~~~f~~i~~~~~~~~~ 151 (298)
.+...+.+.+.....+.. ..++||+.++|+.++ ++++|+||+........+.. .++..+|+.++++++.+.
T Consensus 65 ~~~~~~~~~~~~~~~~~~----~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~- 139 (199)
T PRK09456 65 MALSLSYEQFAHGWQAVF----VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGM- 139 (199)
T ss_pred hCCCCCHHHHHHHHHHHH----hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCC-
Confidence 344444444444433321 357899999999884 78999999988877666554 477889999999998876
Q ss_pred CCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC
Q 022360 152 HKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFED 231 (298)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGD 231 (298)
.||+|+.|..+++++|++|++|++|||
T Consensus 140 -----------------------------------------------------~KP~p~~~~~~~~~~~~~p~~~l~vgD 166 (199)
T PRK09456 140 -----------------------------------------------------RKPEARIYQHVLQAEGFSAADAVFFDD 166 (199)
T ss_pred -----------------------------------------------------CCCCHHHHHHHHHHcCCChhHeEEeCC
Confidence 799999999999999999999999999
Q ss_pred CccchHHHHHcCCeEEEecCC
Q 022360 232 SVRNIQAGKRVGLDTVLIGKS 252 (298)
Q Consensus 232 s~~Di~~a~~aG~~~v~v~~~ 252 (298)
+..|+.+|+++|+.++++..+
T Consensus 167 ~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 167 NADNIEAANALGITSILVTDK 187 (199)
T ss_pred CHHHHHHHHHcCCEEEEecCC
Confidence 999999999999999987654
No 42
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.80 E-value=1.9e-19 Score=152.29 Aligned_cols=89 Identities=21% Similarity=0.332 Sum_probs=81.9
Q ss_pred CCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360 96 ENLKPDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 175 (298)
Q Consensus 96 ~~~~~~~g~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (298)
....++||+.++|+ +++|+||+....++..++++++..+|+.++++++++.
T Consensus 87 ~~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~------------------------- 137 (175)
T TIGR01493 87 KNLPPWPDSAAALA----RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRA------------------------- 137 (175)
T ss_pred hcCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCC-------------------------
Confidence 34678999999999 4789999999999999999999999999999887765
Q ss_pred CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360 176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 242 (298)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a 242 (298)
.||+|+.|..+++++|++|++|++|||+.+|+.+|+++
T Consensus 138 -----------------------------~KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 138 -----------------------------YKPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred -----------------------------CCCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 79999999999999999999999999999999999863
No 43
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.79 E-value=1.2e-18 Score=150.51 Aligned_cols=88 Identities=25% Similarity=0.281 Sum_probs=77.3
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCC
Q 022360 100 PDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSA 176 (298)
Q Consensus 100 ~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (298)
+.++..++|+.| +++++|+||+....++..++++|+..+|+.++++++..
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~--------------------------- 159 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCP--------------------------- 159 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCC---------------------------
Confidence 344446666665 47899999999999999999999999999999988654
Q ss_pred CCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360 177 NGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 242 (298)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a 242 (298)
.||+|+.+..++++++++|++|++|||+.+|+++|+++
T Consensus 160 ----------------------------~KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 160 ----------------------------PKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred ----------------------------CCcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 49999999999999999999999999999999999874
No 44
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.78 E-value=2.7e-18 Score=142.26 Aligned_cols=151 Identities=22% Similarity=0.272 Sum_probs=109.5
Q ss_pred EEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCCChhhHHHHhhcccCC
Q 022360 16 CLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLPY 95 (298)
Q Consensus 16 ~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (298)
+|+||+||||+|+...+..++...+++ .+..... +....|.....+.... ..+.+... ..
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~-----~~~~~~~-------~~~~~g~~~~~~~~~~-----~~~~~~~~---~~ 60 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEE-----FGEDFQA-------LKALRGLAEELLYRIA-----TSFEELLG---YD 60 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHH-----hcccHHH-------HHHHHccChHHHHHHH-----HHHHHHhC---cc
Confidence 489999999999887888887764443 3432211 1112223322222111 11222211 11
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360 96 ENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 172 (298)
Q Consensus 96 ~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (298)
......||+.++|+.| +++++|+|++....+...++++ +..+|+.+++.++.+
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~----------------------- 116 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG----------------------- 116 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-----------------------
Confidence 2345678999999988 3789999999999999999988 888999998877543
Q ss_pred cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC
Q 022360 173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG 243 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG 243 (298)
.||+|+.+.+++++++++| +|++|||+.+|+++|+++|
T Consensus 117 --------------------------------~Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 117 --------------------------------AKPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred --------------------------------CCcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 5999999999999999999 9999999999999999987
No 45
>PLN02811 hydrolase
Probab=99.77 E-value=4.4e-18 Score=149.71 Aligned_cols=184 Identities=20% Similarity=0.233 Sum_probs=128.9
Q ss_pred CCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH----H-HHccCC--CChhhHHHH---hh
Q 022360 21 LDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG----L-RAIGYD--FDYDDYHSF---VH 90 (298)
Q Consensus 21 lDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~----~-~~~~~~--~~~~~~~~~---~~ 90 (298)
|||||+|+.+.+..++.+. .+.+|++.... ......|.+... + ...+.+ ...+.+... ..
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~-----~~~~g~~~~~~-----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKI-----LARYGKTFDWS-----LKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAML 70 (220)
T ss_pred CCCcceecHHHHHHHHHHH-----HHHcCCCCCHH-----HHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 7999999988888887763 45566653221 112233443321 1 112222 122222221 11
Q ss_pred cccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHH-HHHHHhCCCCccceeEeec--CCCCCCCCCCCCChhhHH
Q 022360 91 GRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAV-KVLSRLGLEDCFEGIICFE--TLNPTHKNTVSDDEDDIA 164 (298)
Q Consensus 91 ~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~-~~l~~l~l~~~f~~i~~~~--~~~~~~~~~~~~~~~~~~ 164 (298)
... .....++||+.++|+.|+ ++++|+|+....... ...++.++.++|+.+++.+ +++.
T Consensus 71 ~~~-~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~-------------- 135 (220)
T PLN02811 71 QDL-FPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQ-------------- 135 (220)
T ss_pred HHH-HhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccC--------------
Confidence 111 234678999999999884 789999998876554 3445557888999999988 5553
Q ss_pred HHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcC---CCCCcEEEEcCCccchHHHHH
Q 022360 165 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS---INPQRTLFFEDSVRNIQAGKR 241 (298)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~---i~p~~~i~iGDs~~Di~~a~~ 241 (298)
+||+|++|..++++++ ++|++|++|||+..|+++|++
T Consensus 136 ----------------------------------------~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~ 175 (220)
T PLN02811 136 ----------------------------------------GKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKN 175 (220)
T ss_pred ----------------------------------------CCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHH
Confidence 6999999999999997 999999999999999999999
Q ss_pred cCCeEEEecCCCC----CCCCCEEeCCHHHHH
Q 022360 242 VGLDTVLIGKSQR----VKGADYAFESIHNIK 269 (298)
Q Consensus 242 aG~~~v~v~~~~~----~~~ad~i~~s~~~l~ 269 (298)
+|+.++++.++.. ...++++++++.++.
T Consensus 176 aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~ 207 (220)
T PLN02811 176 AGMSVVMVPDPRLDKSYCKGADQVLSSLLDFK 207 (220)
T ss_pred CCCeEEEEeCCCCcHhhhhchhhHhcCHhhCC
Confidence 9999999977542 346888889888754
No 46
>PLN02954 phosphoserine phosphatase
Probab=99.76 E-value=2.7e-17 Score=144.64 Aligned_cols=201 Identities=15% Similarity=0.167 Sum_probs=124.7
Q ss_pred cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHH-HHH-cc-CCCChhhHHHH
Q 022360 12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAG-LRA-IG-YDFDYDDYHSF 88 (298)
Q Consensus 12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~-~~-~~~~~~~~~~~ 88 (298)
+++|+|+|||||||+++.. +. .+.+.+|.+...... ... +......... +.. ++ .....+.+...
T Consensus 10 ~~~k~viFDfDGTL~~~~~-----~~-----~~~~~~g~~~~~~~~-~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEG-----ID-----ELAEFCGAGEAVAEW-TAK-AMGGSVPFEEALAARLSLFKPSLSQVEEF 77 (224)
T ss_pred ccCCEEEEeCCCcccchHH-----HH-----HHHHHcCChHHHHHH-HHH-HHCCCCCHHHHHHHHHHHcCCCHHHHHHH
Confidence 4579999999999999522 21 255556654222111 111 1111112211 111 11 11223444444
Q ss_pred hhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCC--CccceeEeecCCCCCCCCCCCCChhhH
Q 022360 89 VHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLE--DCFEGIICFETLNPTHKNTVSDDEDDI 163 (298)
Q Consensus 89 ~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~--~~f~~i~~~~~~~~~~~~~~~~~~~~~ 163 (298)
+.. ....++||+.++|+.++ .+++|+|++....++..++.+|+. .+|+..+..+..+...|.
T Consensus 78 ~~~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~--------- 144 (224)
T PLN02954 78 LEK----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGF--------- 144 (224)
T ss_pred HHH----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECc---------
Confidence 443 12467899999998874 679999999999999999999996 466554443322211000
Q ss_pred HHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC
Q 022360 164 AFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG 243 (298)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG 243 (298)
....+ . ..+++|++.+..++++++. ++|++|||+.+|+.+++++|
T Consensus 145 -------------------------~~~~~----~----~~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~ 189 (224)
T PLN02954 145 -------------------------DENEP----T----SRSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGG 189 (224)
T ss_pred -------------------------cCCCc----c----cCCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCC
Confidence 00000 0 0157788999999998885 68999999999999999988
Q ss_pred CeEEEecCCC-----CCCCCCEEeCCHHHHHHHh
Q 022360 244 LDTVLIGKSQ-----RVKGADYAFESIHNIKEAI 272 (298)
Q Consensus 244 ~~~v~v~~~~-----~~~~ad~i~~s~~~l~~~l 272 (298)
+.++...++. ....++++++++.+|.+.+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 190 ADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred CCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence 8876543322 1346899999999987754
No 47
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.76 E-value=1.1e-17 Score=142.92 Aligned_cols=125 Identities=19% Similarity=0.224 Sum_probs=95.4
Q ss_pred CCCChhHHHHHHhCC---CcEEEEeCCCh---------------HHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360 98 LKPDPVLRSLLLSLP---LRKIIFTNADK---------------VHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD 159 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~---------------~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~ 159 (298)
+.++||+.++|++|+ ++++|+||+.. ..+...++++++ .|+.++.+.....-
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~-------- 97 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPED-------- 97 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCC--------
Confidence 467789999988884 78999999863 234455666676 37777654321100
Q ss_pred hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360 160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG 239 (298)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a 239 (298)
.. ...||+|.++..+++++|++|++|++|||+.+|+.+|
T Consensus 98 -------------------------------------~~----~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A 136 (181)
T PRK08942 98 -------------------------------------GC----DCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAA 136 (181)
T ss_pred -------------------------------------CC----cCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHH
Confidence 00 0169999999999999999999999999999999999
Q ss_pred HHcCCeEEEecCCCC-----CCCC--CEEeCCHHHHHHHhH
Q 022360 240 KRVGLDTVLIGKSQR-----VKGA--DYAFESIHNIKEAIP 273 (298)
Q Consensus 240 ~~aG~~~v~v~~~~~-----~~~a--d~i~~s~~~l~~~l~ 273 (298)
+++|+.++++.++.. ...+ ++++.++.++.+++.
T Consensus 137 ~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 137 AAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred HHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 999999999976542 3345 899999999887764
No 48
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.75 E-value=3.7e-17 Score=140.86 Aligned_cols=112 Identities=14% Similarity=0.135 Sum_probs=89.2
Q ss_pred CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360 98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 174 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (298)
..++||+.++|+.|+ ++++|+|++....++..++++|+..+|+..+.+++.+.+.+
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p--------------------- 137 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQP--------------------- 137 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEec---------------------
Confidence 578999999999884 78999999999999999999999888887776655443100
Q ss_pred CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360 175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~ 253 (298)
.+++.. ...+|+..+..+++++++++++|++|||+.+|+.+++.+|+.++..+.+.
T Consensus 138 ------------------~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 138 ------------------DGIVRV-----TFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred ------------------ceeeEE-----ccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 000000 13566789999999999999999999999999999999999988766554
No 49
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.74 E-value=3.5e-17 Score=151.76 Aligned_cols=129 Identities=16% Similarity=0.134 Sum_probs=97.9
Q ss_pred CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360 97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 173 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (298)
.+++.||+.++|+.++ .+++|+|++.....+..++++++...+...+...+...
T Consensus 179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~l----------------------- 235 (322)
T PRK11133 179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKL----------------------- 235 (322)
T ss_pred hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEE-----------------------
Confidence 3678999999988875 78999999999989999999998765544332221110
Q ss_pred CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360 174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~ 253 (298)
.+...+. .. .++||++.++.+++++|+++++|++|||+.||+.|++.+|+++++-+.+.
T Consensus 236 -----------tg~v~g~-----iv-----~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~ 294 (322)
T PRK11133 236 -----------TGNVLGD-----IV-----DAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPK 294 (322)
T ss_pred -----------EeEecCc-----cC-----CcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHH
Confidence 0000000 00 15899999999999999999999999999999999999999999966666
Q ss_pred CCCCCCEEeCCHHHHHH
Q 022360 254 RVKGADYAFESIHNIKE 270 (298)
Q Consensus 254 ~~~~ad~i~~s~~~l~~ 270 (298)
.+..|++++++ .+|..
T Consensus 295 Vk~~Ad~~i~~-~~l~~ 310 (322)
T PRK11133 295 VNEQAQVTIRH-ADLMG 310 (322)
T ss_pred HHhhCCEEecC-cCHHH
Confidence 78899999973 33433
No 50
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.74 E-value=2.1e-17 Score=143.21 Aligned_cols=196 Identities=14% Similarity=0.098 Sum_probs=123.2
Q ss_pred ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHH-HHHHHHhCCCHHHHHHccCCCChhhHHHHhhcc
Q 022360 14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLG-NLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGR 92 (298)
Q Consensus 14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (298)
+++|+|||||||++ . .+. .+.+..|.+........ ..+....+.....+.. ...+.+.+.....
T Consensus 1 ~~~v~FD~DGTL~~--~----~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~i~~~~~-- 65 (205)
T PRK13582 1 MEIVCLDLEGVLVP--E----IWI-----AFAEKTGIPELRATTRDIPDYDVLMKQRLDILDE--HGLGLADIQEVIA-- 65 (205)
T ss_pred CeEEEEeCCCCChh--h----HHH-----HHHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHH--cCCCHHHHHHHHH--
Confidence 47899999999994 1 222 14455565432100000 0001111111111221 1233444544433
Q ss_pred cCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhh
Q 022360 93 LPYENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAA 170 (298)
Q Consensus 93 ~~~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (298)
...++||+.++|..++ ++++|+|++....++..++++++..+|+..+...+.+...|
T Consensus 66 ----~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~----------------- 124 (205)
T PRK13582 66 ----TLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITG----------------- 124 (205)
T ss_pred ----hCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEEC-----------------
Confidence 3577899999999886 67899999999999999999999988877665543321100
Q ss_pred cccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEec
Q 022360 171 STTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG 250 (298)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~ 250 (298)
. .+++|.....++++++..+++|++|||+.+|+.+++++|+++.+ +
T Consensus 125 ---------------------------~------~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~-~ 170 (205)
T PRK13582 125 ---------------------------Y------DLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILF-R 170 (205)
T ss_pred ---------------------------c------cccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEE-C
Confidence 0 11222334555566666778999999999999999999987653 3
Q ss_pred CCCC--CCCCCE-EeCCHHHHHHHhHHhhccC
Q 022360 251 KSQR--VKGADY-AFESIHNIKEAIPELWESD 279 (298)
Q Consensus 251 ~~~~--~~~ad~-i~~s~~~l~~~l~~~~~~~ 279 (298)
.+.. ...+++ +++++.+|.+.|.+.+.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~ 202 (205)
T PRK13582 171 PPANVIAEFPQFPAVHTYDELLAAIDKASARA 202 (205)
T ss_pred CCHHHHHhCCcccccCCHHHHHHHHHHHHhhc
Confidence 3322 234555 8999999999998887653
No 51
>PRK06769 hypothetical protein; Validated
Probab=99.73 E-value=2.8e-17 Score=139.66 Aligned_cols=121 Identities=19% Similarity=0.218 Sum_probs=93.2
Q ss_pred CCCChhHHHHHHhCC---CcEEEEeCCChH--------HHHHHHHHhCCCCccceeE-eecCCCCCCCCCCCCChhhHHH
Q 022360 98 LKPDPVLRSLLLSLP---LRKIIFTNADKV--------HAVKVLSRLGLEDCFEGII-CFETLNPTHKNTVSDDEDDIAF 165 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~--------~~~~~l~~l~l~~~f~~i~-~~~~~~~~~~~~~~~~~~~~~~ 165 (298)
..++||+.++|++|+ ++++|+||.... .....++.+|+..+|..+. ..++.+.
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~--------------- 91 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCEC--------------- 91 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCC---------------
Confidence 457889999998884 789999997642 1333466666655543332 2222222
Q ss_pred HHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCe
Q 022360 166 VESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLD 245 (298)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~ 245 (298)
.||+|..+.+++++++++|++|++|||+.+|+.+|+++|+.
T Consensus 92 ---------------------------------------~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~ 132 (173)
T PRK06769 92 ---------------------------------------RKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNAT 132 (173)
T ss_pred ---------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 69999999999999999999999999999999999999999
Q ss_pred EEEecCCCC------------CCCCCEEeCCHHHHHHHh
Q 022360 246 TVLIGKSQR------------VKGADYAFESIHNIKEAI 272 (298)
Q Consensus 246 ~v~v~~~~~------------~~~ad~i~~s~~~l~~~l 272 (298)
++++.++.. ...+++++.++.+|.++|
T Consensus 133 ~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 133 TILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWI 171 (173)
T ss_pred EEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHH
Confidence 999977541 345889999999987764
No 52
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.73 E-value=4.8e-17 Score=138.45 Aligned_cols=127 Identities=17% Similarity=0.180 Sum_probs=93.1
Q ss_pred CCCChhHHHHHHhCC---CcEEEEeCCCh---------------HHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC
Q 022360 98 LKPDPVLRSLLLSLP---LRKIIFTNADK---------------VHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD 159 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~---------------~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~ 159 (298)
+.++||+.++|++|+ ++++|+||... ..+...+.++++. |+.++.+.....- .
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~-~------ 95 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEG-V------ 95 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcc-c------
Confidence 467788999988874 78999999874 3344556666665 6676654321100 0
Q ss_pred hhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360 160 EDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAG 239 (298)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a 239 (298)
+. +...-.++||+|.+|..++++++++|++|+||||+.+|+++|
T Consensus 96 --------------------------~~----------~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA 139 (176)
T TIGR00213 96 --------------------------EE----------FRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAG 139 (176)
T ss_pred --------------------------cc----------ccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHH
Confidence 00 000000269999999999999999999999999999999999
Q ss_pred HHcCCeE-EEecCCCC-----CCCCCEEeCCHHHHH
Q 022360 240 KRVGLDT-VLIGKSQR-----VKGADYAFESIHNIK 269 (298)
Q Consensus 240 ~~aG~~~-v~v~~~~~-----~~~ad~i~~s~~~l~ 269 (298)
+++|+.+ +++.++.. ...|+++++++.+|.
T Consensus 140 ~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 140 VAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred HHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 9999998 78877653 246999999999875
No 53
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.71 E-value=1.6e-16 Score=139.78 Aligned_cols=102 Identities=21% Similarity=0.248 Sum_probs=89.1
Q ss_pred CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360 97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 173 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (298)
.....++..++|++++ ..++++||.+... +..+..+++..+||.++.+...+.
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~~~fD~vv~S~e~g~----------------------- 166 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLSAYFDFVVESCEVGL----------------------- 166 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHHHhhhhhhhhhhhcc-----------------------
Confidence 3455677778888886 4567889988774 488888999999999999999887
Q ss_pred CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCC
Q 022360 174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKS 252 (298)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~ 252 (298)
.||+|.+|+.+++++++.|++|++|||+. ||+++|+++||.++.+..+
T Consensus 167 -------------------------------~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 167 -------------------------------EKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNS 215 (237)
T ss_pred -------------------------------CCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccc
Confidence 79999999999999999999999999999 9999999999999988654
Q ss_pred C
Q 022360 253 Q 253 (298)
Q Consensus 253 ~ 253 (298)
.
T Consensus 216 ~ 216 (237)
T KOG3085|consen 216 I 216 (237)
T ss_pred c
Confidence 3
No 54
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.70 E-value=9.9e-17 Score=141.06 Aligned_cols=125 Identities=11% Similarity=0.128 Sum_probs=91.4
Q ss_pred CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCC--cc--ceeEeecCCCCCCCCCCCCChhhHHHHHhh
Q 022360 97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLED--CF--EGIICFETLNPTHKNTVSDDEDDIAFVESA 169 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~--~f--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (298)
...++||+.++|+.++ ++++|+|++...+++.+++++ +.. ++ +..+..+....
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~------------------- 131 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI------------------- 131 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE-------------------
Confidence 3678999999998874 789999999999999999988 643 22 11122111110
Q ss_pred hcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHH----------HHHHHHHcCCCCCcEEEEcCCccchHHH
Q 022360 170 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELA----------IEKALKIASINPQRTLFFEDSVRNIQAG 239 (298)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~----------~~~~l~~l~i~p~~~i~iGDs~~Di~~a 239 (298)
.||.|.. ...++++++..+.+|+||||+.+|+.+|
T Consensus 132 -----------------------------------~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa 176 (219)
T PRK09552 132 -----------------------------------TWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAA 176 (219)
T ss_pred -----------------------------------eccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHH
Confidence 2333322 3467788899999999999999999999
Q ss_pred HHcCCeEEEecC--C--CCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360 240 KRVGLDTVLIGK--S--QRVKGADYAFESIHNIKEAIPELWE 277 (298)
Q Consensus 240 ~~aG~~~v~v~~--~--~~~~~ad~i~~s~~~l~~~l~~~~~ 277 (298)
+++|+..+ -.. . .....+.+.++++.|+.+.|+++++
T Consensus 177 ~~Ag~~~a-~~~l~~~~~~~~~~~~~~~~f~ei~~~l~~~~~ 217 (219)
T PRK09552 177 KQADKVFA-RDFLITKCEELGIPYTPFETFHDVQTELKHLLE 217 (219)
T ss_pred HHCCccee-HHHHHHHHHHcCCCccccCCHHHHHHHHHHHhc
Confidence 99999544 111 1 1356688899999999999998875
No 55
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.68 E-value=7.7e-17 Score=133.25 Aligned_cols=99 Identities=26% Similarity=0.385 Sum_probs=77.5
Q ss_pred CCChhHHHHHHhCC---CcEEEEeCCCh---------------HHHHHHHHHhCCCCccceeEe----ecCCCCCCCCCC
Q 022360 99 KPDPVLRSLLLSLP---LRKIIFTNADK---------------VHAVKVLSRLGLEDCFEGIIC----FETLNPTHKNTV 156 (298)
Q Consensus 99 ~~~~g~~~~L~~l~---~~~~ivS~~~~---------------~~~~~~l~~l~l~~~f~~i~~----~~~~~~~~~~~~ 156 (298)
.++||+.++|+.|+ ++++|+||+.. ..+...++++++... ..++. .+..+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~~~~------ 99 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHHPADNCSC------ 99 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCCCCCCCCC------
Confidence 56788888888774 78999999873 456677788887521 11111 122221
Q ss_pred CCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccch
Q 022360 157 SDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNI 236 (298)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di 236 (298)
.||+|++++.++++++++|++|++|||+..|+
T Consensus 100 ------------------------------------------------~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di 131 (147)
T TIGR01656 100 ------------------------------------------------RKPKPGLILEALKRLGVDASRSLVVGDRLRDL 131 (147)
T ss_pred ------------------------------------------------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHH
Confidence 69999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEecCC
Q 022360 237 QAGKRVGLDTVLIGKS 252 (298)
Q Consensus 237 ~~a~~aG~~~v~v~~~ 252 (298)
++|+++|+.++++..+
T Consensus 132 ~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 132 QAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHCCCCEEEecCC
Confidence 9999999999998754
No 56
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.67 E-value=7.9e-16 Score=134.79 Aligned_cols=194 Identities=21% Similarity=0.230 Sum_probs=141.9
Q ss_pred cCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHH-H----HccCCCChhhHH
Q 022360 12 AKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGL-R----AIGYDFDYDDYH 86 (298)
Q Consensus 12 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~----~~~~~~~~~~~~ 86 (298)
..+.+++||+||||+++...+...++. +..++|...+.... ....|...... . ......+.+++.
T Consensus 8 ~~~~~~lfD~dG~lvdte~~y~~~~~~-----~~~~ygk~~~~~~~-----~~~mG~~~~eaa~~~~~~~~dp~s~ee~~ 77 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDLYTEAWQE-----LLDRYGKPYPWDVK-----VKSMGKRTSEAARLFVKKLPDPVSREEFN 77 (222)
T ss_pred cceeeEEEecCCcEEecHHHHHHHHHH-----HHHHcCCCChHHHH-----HHHcCCCHHHHHHHHHhhcCCCCCHHHHH
Confidence 457899999999999988888887775 56666764444211 22344432222 1 234566677766
Q ss_pred HHhhccc--CCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhC-CCCccceeEeecCCCCCCCCCCCCCh
Q 022360 87 SFVHGRL--PYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLG-LEDCFEGIICFETLNPTHKNTVSDDE 160 (298)
Q Consensus 87 ~~~~~~~--~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~-l~~~f~~i~~~~~~~~~~~~~~~~~~ 160 (298)
...+... ......+.||+..++..|+ +++.++|+.+........++++ +...|..++.+++...
T Consensus 78 ~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v---------- 147 (222)
T KOG2914|consen 78 KEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEV---------- 147 (222)
T ss_pred HHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccc----------
Confidence 5543322 1356788899999999885 7899999999988888887776 6777888887433322
Q ss_pred hhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEcCCccchHHH
Q 022360 161 DDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINP-QRTLFFEDSVRNIQAG 239 (298)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p-~~~i~iGDs~~Di~~a 239 (298)
+ .+||+|++|..+++++|..| +.|++|+|+.+.+++|
T Consensus 148 --------------------------------------~----~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa 185 (222)
T KOG2914|consen 148 --------------------------------------K----NGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAA 185 (222)
T ss_pred --------------------------------------c----CCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHH
Confidence 1 17999999999999999998 9999999999999999
Q ss_pred HHcCCeEEEecCCCC----CCCCCEEeCCHHH
Q 022360 240 KRVGLDTVLIGKSQR----VKGADYAFESIHN 267 (298)
Q Consensus 240 ~~aG~~~v~v~~~~~----~~~ad~i~~s~~~ 267 (298)
+++|+.+++++.... ...++.+++++.+
T Consensus 186 ~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~ 217 (222)
T KOG2914|consen 186 KAAGMQVVGVATPDLSNLFSAGATLILESLED 217 (222)
T ss_pred HhcCCeEEEecCCCcchhhhhccceecccccc
Confidence 999999999977432 4556666665544
No 57
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.66 E-value=4.9e-15 Score=130.44 Aligned_cols=102 Identities=18% Similarity=0.226 Sum_probs=87.3
Q ss_pred CCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHh---CCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhh
Q 022360 96 ENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRL---GLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESA 169 (298)
Q Consensus 96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l---~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (298)
....++||+.++|+.|+ ++++|+||+....++..+++. ++.++|+..+.. ..+
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~-~~g-------------------- 150 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT-TVG-------------------- 150 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe-Ccc--------------------
Confidence 34678999999999984 789999999999888888876 577778776632 121
Q ss_pred hcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360 170 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 249 (298)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v 249 (298)
.||+|+.|.++++++|++|++|++|||+..|+++|+++|+.++++
T Consensus 151 -----------------------------------~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v 195 (220)
T TIGR01691 151 -----------------------------------LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQL 195 (220)
T ss_pred -----------------------------------cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 699999999999999999999999999999999999999999998
Q ss_pred cCCC
Q 022360 250 GKSQ 253 (298)
Q Consensus 250 ~~~~ 253 (298)
.++.
T Consensus 196 ~r~g 199 (220)
T TIGR01691 196 VRPG 199 (220)
T ss_pred ECCC
Confidence 6654
No 58
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.65 E-value=1.4e-15 Score=123.06 Aligned_cols=94 Identities=26% Similarity=0.387 Sum_probs=77.8
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCC--------hHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHH
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNAD--------KVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVE 167 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~--------~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (298)
.++|++.++|+.| +++++++||+. ...++..++++++. ++.++.+. +.
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~----------------- 83 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HC----------------- 83 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CC-----------------
Confidence 4567777777776 47899999998 77888999999986 33343332 22
Q ss_pred hhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHc-CCCCCcEEEEcC-CccchHHHHHcCCe
Q 022360 168 SAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIA-SINPQRTLFFED-SVRNIQAGKRVGLD 245 (298)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l-~i~p~~~i~iGD-s~~Di~~a~~aG~~ 245 (298)
.||+++.+..+++++ +++|++|+|||| +.+|+.+|+++|+.
T Consensus 84 -------------------------------------~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 84 -------------------------------------RKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred -------------------------------------CCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 699999999999999 599999999999 68999999999999
Q ss_pred EEEec
Q 022360 246 TVLIG 250 (298)
Q Consensus 246 ~v~v~ 250 (298)
+++++
T Consensus 127 ~i~~~ 131 (132)
T TIGR01662 127 FILVA 131 (132)
T ss_pred EEEee
Confidence 99875
No 59
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.63 E-value=1.2e-16 Score=135.41 Aligned_cols=104 Identities=18% Similarity=0.235 Sum_probs=90.0
Q ss_pred CCCCCChhHHHHHHhCC---CcEEEEeCC-ChHHHHHHHHHhCCC---------CccceeEeecCCCCCCCCCCCCChhh
Q 022360 96 ENLKPDPVLRSLLLSLP---LRKIIFTNA-DKVHAVKVLSRLGLE---------DCFEGIICFETLNPTHKNTVSDDEDD 162 (298)
Q Consensus 96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~-~~~~~~~~l~~l~l~---------~~f~~i~~~~~~~~~~~~~~~~~~~~ 162 (298)
....++||+.++|+.|+ .+++|+|+. ....++..++.+++. ++|+.++++++...
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~------------ 109 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNK------------ 109 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCch------------
Confidence 45678999999999985 679999988 888889999999998 99999998875332
Q ss_pred HHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHc--CCCCCcEEEEcCCccchHHHH
Q 022360 163 IAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIA--SINPQRTLFFEDSVRNIQAGK 240 (298)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l--~i~p~~~i~iGDs~~Di~~a~ 240 (298)
.||.+.+++++.+++ +++|++|+||||+..|+++|+
T Consensus 110 ------------------------------------------~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~ 147 (174)
T TIGR01685 110 ------------------------------------------AKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVW 147 (174)
T ss_pred ------------------------------------------HHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHH
Confidence 477778888887777 899999999999999999999
Q ss_pred HcCCeEEEecCCC
Q 022360 241 RVGLDTVLIGKSQ 253 (298)
Q Consensus 241 ~aG~~~v~v~~~~ 253 (298)
++|+.++++.++.
T Consensus 148 ~aGi~~i~v~~g~ 160 (174)
T TIGR01685 148 GYGVTSCYCPSGM 160 (174)
T ss_pred HhCCEEEEcCCCc
Confidence 9999999997765
No 60
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.62 E-value=4.9e-15 Score=129.00 Aligned_cols=193 Identities=13% Similarity=0.109 Sum_probs=119.7
Q ss_pred cEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHHHHHHccCCCChhhHHHHhhcccC
Q 022360 15 DCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMAGLRAIGYDFDYDDYHSFVHGRLP 94 (298)
Q Consensus 15 k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (298)
.+++|||||||++. .|. ++..+.|.............+..+......+... ...+.+.+.+.+.
T Consensus 2 ~la~FDlD~TLi~~------~w~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~~-~g~~~~~i~~~~~---- 65 (203)
T TIGR02137 2 EIACLDLEGVLVPE------IWI-----AFAEKTGIDALKATTRDIPDYDVLMKQRLRILDE-HGLKLGDIQEVIA---- 65 (203)
T ss_pred eEEEEeCCcccHHH------HHH-----HHHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHHH-CCCCHHHHHHHHH----
Confidence 46999999999973 232 2455666532221110000111111111111111 1344555555443
Q ss_pred CCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360 95 YENLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 172 (298)
Q Consensus 95 ~~~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (298)
.+.++||+.++|+.++ .+++|+|++....+.++++++|++.+|...+..++.+.+.|..
T Consensus 66 --~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~----------------- 126 (203)
T TIGR02137 66 --TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQ----------------- 126 (203)
T ss_pred --hCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECee-----------------
Confidence 2578999999999875 5799999999999999999999998887655443312211100
Q ss_pred cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360 173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 252 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~ 252 (298)
... ..+|...++.+ ++.+. +|++|||+.||+.|++.+|.++++.+.+
T Consensus 127 ------------------------~~~-----~~~K~~~l~~l-~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~ 173 (203)
T TIGR02137 127 ------------------------LRQ-----KDPKRQSVIAF-KSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAPE 173 (203)
T ss_pred ------------------------ecC-----cchHHHHHHHH-HhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCCH
Confidence 000 12334445444 55553 7999999999999999999999998887
Q ss_pred CCC-CCCCE-EeCCHHHHHHHhHHh
Q 022360 253 QRV-KGADY-AFESIHNIKEAIPEL 275 (298)
Q Consensus 253 ~~~-~~ad~-i~~s~~~l~~~l~~~ 275 (298)
..+ ..+++ ++.+.++|.+.+.+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 174 NVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred HHHHhCCCCCcccCHHHHHHHHHHH
Confidence 653 33333 677888888877665
No 61
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.61 E-value=4.6e-15 Score=129.96 Aligned_cols=194 Identities=15% Similarity=0.138 Sum_probs=128.7
Q ss_pred CccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHh--CCCHHHHHHccCCCChhhHHHHhh
Q 022360 13 KYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNY--GTTMAGLRAIGYDFDYDDYHSFVH 90 (298)
Q Consensus 13 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~ 90 (298)
+.++++|||||||++ ...+. ++.+..|................. ..............+.+...+...
T Consensus 4 ~~~L~vFD~D~TLi~-----~~~~~-----~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~~ 73 (212)
T COG0560 4 MKKLAVFDLDGTLIN-----AELID-----ELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEVRE 73 (212)
T ss_pred ccceEEEecccchhh-----HHHHH-----HHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 468999999999999 22222 345555553322211111110000 111111122233344444544444
Q ss_pred cccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHH
Q 022360 91 GRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVE 167 (298)
Q Consensus 91 ~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (298)
+. ..+.||+.+++++++ .+++|+|++....++++.+.+|++..+...+..++ +.+.|+-+
T Consensus 74 ~~-----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~ltG~v~----------- 136 (212)
T COG0560 74 EF-----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GKLTGRVV----------- 136 (212)
T ss_pred hc-----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CEEeceee-----------
Confidence 31 677889888888774 78999999999999999999999999999888877 44323110
Q ss_pred hhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEE
Q 022360 168 SAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTV 247 (298)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v 247 (298)
| .+..++.|...+..+++++|+++++++++|||.||+.|.+.+|.+.+
T Consensus 137 ------------------g--------------~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia 184 (212)
T COG0560 137 ------------------G--------------PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIA 184 (212)
T ss_pred ------------------e--------------eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeE
Confidence 0 00114678899999999999999999999999999999999999998
Q ss_pred EecCCCCCCCCCEEeCCH
Q 022360 248 LIGKSQRVKGADYAFESI 265 (298)
Q Consensus 248 ~v~~~~~~~~ad~i~~s~ 265 (298)
.-+.+..+..++..+...
T Consensus 185 ~n~~~~l~~~a~~~~~~~ 202 (212)
T COG0560 185 VNPKPKLRALADVRIWPI 202 (212)
T ss_pred eCcCHHHHHHHHHhcChh
Confidence 777766555555444443
No 62
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.61 E-value=2e-15 Score=126.81 Aligned_cols=100 Identities=19% Similarity=0.323 Sum_probs=84.9
Q ss_pred CCCChhHHHHHHhCC---CcEEEEeCCC---------------hHHHHHHHHHhCCCCccceeEee-----cCCCCCCCC
Q 022360 98 LKPDPVLRSLLLSLP---LRKIIFTNAD---------------KVHAVKVLSRLGLEDCFEGIICF-----ETLNPTHKN 154 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~---~~~~ivS~~~---------------~~~~~~~l~~l~l~~~f~~i~~~-----~~~~~~~~~ 154 (298)
+.++||+.++|+.|+ ++++|+||.. ...+..+++.+|+. |+.++.+ ++.+.
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~---- 101 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDC---- 101 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCC----
Confidence 577899999998884 7899999963 45677889999996 7766543 44333
Q ss_pred CCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcc
Q 022360 155 TVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVR 234 (298)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~ 234 (298)
.||++..+..++++++++|++|+||||+.+
T Consensus 102 --------------------------------------------------~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~ 131 (161)
T TIGR01261 102 --------------------------------------------------RKPKIKLLEPYLKKNLIDKARSYVIGDRET 131 (161)
T ss_pred --------------------------------------------------CCCCHHHHHHHHHHcCCCHHHeEEEeCCHH
Confidence 799999999999999999999999999999
Q ss_pred chHHHHHcCCeEEEecCCC
Q 022360 235 NIQAGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 235 Di~~a~~aG~~~v~v~~~~ 253 (298)
|+++|+++|+.++++.+++
T Consensus 132 Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 132 DMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred HHHHHHHCCCeEEEEChhh
Confidence 9999999999999997765
No 63
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.61 E-value=1.3e-14 Score=128.86 Aligned_cols=97 Identities=14% Similarity=0.119 Sum_probs=78.8
Q ss_pred CCCCChhHHHHHHhCC---CcEEEEeCC----ChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhh
Q 022360 97 NLKPDPVLRSLLLSLP---LRKIIFTNA----DKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESA 169 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l~---~~~~ivS~~----~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (298)
...+.+++.++|++++ .+++++|+. ....++.+++++|+..+|+.+++.++...
T Consensus 112 ~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~------------------- 172 (237)
T TIGR01672 112 FSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQ------------------- 172 (237)
T ss_pred CCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCC-------------------
Confidence 4567778999999884 789999998 66688899999999999998888765442
Q ss_pred hcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360 170 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 249 (298)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v 249 (298)
.||.+. .+++++++ ++||||+.+|+.+|+++|+.++.+
T Consensus 173 -----------------------------------~Kp~~~---~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 173 -----------------------------------YQYTKT---QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred -----------------------------------CCCCHH---HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEE
Confidence 466654 35567776 799999999999999999999999
Q ss_pred cCCCC
Q 022360 250 GKSQR 254 (298)
Q Consensus 250 ~~~~~ 254 (298)
.++..
T Consensus 211 ~~g~~ 215 (237)
T TIGR01672 211 LRASN 215 (237)
T ss_pred EecCC
Confidence 77653
No 64
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.59 E-value=5.2e-15 Score=117.89 Aligned_cols=116 Identities=23% Similarity=0.293 Sum_probs=89.3
Q ss_pred CCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360 96 ENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 172 (298)
Q Consensus 96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (298)
....++|++.++|+.|+ .+++++|++....++..++.+++..+++.+++.+.........
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----------------- 83 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKE----------------- 83 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccc-----------------
Confidence 44688899999988875 6799999999999999999999988888888776543210000
Q ss_pred cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360 173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 249 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v 249 (298)
.... .+ .....+||++..+..++++++.+++++++|||+.+|+++++++|+.++++
T Consensus 84 ----~~~~--------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 84 ----GLFL--------GG---------GPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred ----cccc--------cc---------cccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 0000 00 00012599999999999999999999999999999999999999998764
No 65
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.58 E-value=3e-15 Score=126.56 Aligned_cols=110 Identities=16% Similarity=0.183 Sum_probs=91.8
Q ss_pred HHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhh
Q 022360 105 RSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDI 184 (298)
Q Consensus 105 ~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (298)
...|+..+++++|+|+.....++..++++++..+|+.
T Consensus 43 ~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~------------------------------------------- 79 (169)
T TIGR02726 43 VIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG------------------------------------------- 79 (169)
T ss_pred HHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec-------------------------------------------
Confidence 4567778899999999999999999999999877741
Q ss_pred ccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCCCCCCCEEeC
Q 022360 185 IGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQRVKGADYAFE 263 (298)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~~~~ad~i~~ 263 (298)
.||+|..++.+++++++++++|++|||+.||+.|++.+|+..++.+. ...+..+++++.
T Consensus 80 --------------------~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~ 139 (169)
T TIGR02726 80 --------------------IKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTT 139 (169)
T ss_pred --------------------CCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcC
Confidence 37888999999999999999999999999999999999999998854 445788899886
Q ss_pred CHHH---HHHHhHHhhc
Q 022360 264 SIHN---IKEAIPELWE 277 (298)
Q Consensus 264 s~~~---l~~~l~~~~~ 277 (298)
+..+ +.++++.++.
T Consensus 140 ~~~~~g~v~e~~e~il~ 156 (169)
T TIGR02726 140 ARGGHGAVREVAELILK 156 (169)
T ss_pred CCCCCCHHHHHHHHHHH
Confidence 4332 4566666554
No 66
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.58 E-value=6.3e-15 Score=124.39 Aligned_cols=93 Identities=20% Similarity=0.219 Sum_probs=75.8
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChH------------HHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHH
Q 022360 100 PDPVLRSLLLSL---PLRKIIFTNADKV------------HAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIA 164 (298)
Q Consensus 100 ~~~g~~~~L~~l---~~~~~ivS~~~~~------------~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 164 (298)
++||+.++|+.| +++++|+||+... .++..++++|+.. +.++++++...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~~~-------------- 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAGLY-------------- 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCCCC--------------
Confidence 678888888887 4789999997753 4678889999853 45555543222
Q ss_pred HHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcC--CCCCcEEEEcCCc--------c
Q 022360 165 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS--INPQRTLFFEDSV--------R 234 (298)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~--i~p~~~i~iGDs~--------~ 234 (298)
.||+|..+..++++++ ++|++++||||+. +
T Consensus 107 ----------------------------------------~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~ 146 (166)
T TIGR01664 107 ----------------------------------------RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDA 146 (166)
T ss_pred ----------------------------------------CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchh
Confidence 6999999999999999 9999999999996 6
Q ss_pred chHHHHHcCCeEEE
Q 022360 235 NIQAGKRVGLDTVL 248 (298)
Q Consensus 235 Di~~a~~aG~~~v~ 248 (298)
|+++|+++|+.+++
T Consensus 147 Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 147 DIKFAKNLGLEFKY 160 (166)
T ss_pred HHHHHHHCCCCcCC
Confidence 99999999999864
No 67
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.58 E-value=4.3e-14 Score=120.32 Aligned_cols=112 Identities=14% Similarity=0.117 Sum_probs=78.4
Q ss_pred CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360 98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 174 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (298)
.+++||+.++|+.|+ ++++|+|++....++..++++++.++|+.+++++..-.-.|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g--------------------- 129 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDG--------------------- 129 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCC---------------------
Confidence 578899999998874 78999999999999999999999999999987654221000
Q ss_pred CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeE
Q 022360 175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDT 246 (298)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~ 246 (298)
++.. .|++.-+..+ ...+.+|+..+++++++. ++++++|||+.+|+.+|+++++-.
T Consensus 130 ------~~~~-----~~~~~~~~~~--~~~g~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 130 ------RHIV-----WPHHCHGCCS--CPCGCCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred ------cEEE-----ecCCCCccCc--CCCCCCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 0000 0000000000 001456788999888765 789999999999999999986544
No 68
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.57 E-value=4.4e-15 Score=123.82 Aligned_cols=113 Identities=16% Similarity=0.212 Sum_probs=92.6
Q ss_pred HHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhh
Q 022360 104 LRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFD 183 (298)
Q Consensus 104 ~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (298)
+.+.|+..+.+++|+|+.....+...++++|+..+|+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~------------------------------------------ 73 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG------------------------------------------ 73 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec------------------------------------------
Confidence 45666777789999999999999999999999877631
Q ss_pred hccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCCCCCCCEEe
Q 022360 184 IIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQRVKGADYAF 262 (298)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~~~~ad~i~ 262 (298)
.+|+++.+..+++++++++++|++|||+.||+.+++.+|+..++... ...+..+++++
T Consensus 74 ---------------------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~ 132 (154)
T TIGR01670 74 ---------------------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVT 132 (154)
T ss_pred ---------------------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEe
Confidence 37788999999999999999999999999999999999998444322 33467789999
Q ss_pred CCHHH---HHHHhHHhhccC
Q 022360 263 ESIHN---IKEAIPELWESD 279 (298)
Q Consensus 263 ~s~~~---l~~~l~~~~~~~ 279 (298)
.+..+ +.++++++++..
T Consensus 133 ~~~~~~g~~~~~~~~~~~~~ 152 (154)
T TIGR01670 133 RIAGGRGAVREVCELLLLAQ 152 (154)
T ss_pred cCCCCCcHHHHHHHHHHHhh
Confidence 88754 778888776543
No 69
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.55 E-value=7.5e-15 Score=129.48 Aligned_cols=72 Identities=19% Similarity=0.275 Sum_probs=61.7
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhh
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELW 276 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~ 276 (298)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+++++.+... .+..+++++.+.++ +.+.|++++
T Consensus 155 ~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 155 GVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHHHHh
Confidence 4788899999999999999999999999999999999999998875544 47889999987665 777777653
No 70
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.55 E-value=8.4e-15 Score=132.06 Aligned_cols=68 Identities=16% Similarity=0.317 Sum_probs=61.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHHHHHh
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNIKEAI 272 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l~~~l 272 (298)
+||+|.++..++++++++|++|+||||+. +||.+|+++|+.++++.++.. ...|+++++++.+|.+.|
T Consensus 178 gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 178 GKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred cCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 69999999999999999999999999997 999999999999999977631 356899999999998764
No 71
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.53 E-value=5.6e-14 Score=123.16 Aligned_cols=126 Identities=11% Similarity=0.100 Sum_probs=86.4
Q ss_pred CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCcc-c--eeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360 98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCF-E--GIICFETLNPTHKNTVSDDEDDIAFVESAAS 171 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f-~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (298)
..++||+.++|+.++ .+++|+|++...+++.+++.++....| . .++..+.+..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~--------------------- 127 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI--------------------- 127 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE---------------------
Confidence 678899999998884 789999999999999999887543322 1 1211111100
Q ss_pred ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHH----------HHHHHHHcCCCCCcEEEEcCCccchHHHHH
Q 022360 172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELA----------IEKALKIASINPQRTLFFEDSVRNIQAGKR 241 (298)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~----------~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~ 241 (298)
.+|.|.. ...++++++..+++++||||+.+|+.+|+.
T Consensus 128 ---------------------------------~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~ 174 (214)
T TIGR03333 128 ---------------------------------DWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQ 174 (214)
T ss_pred ---------------------------------eCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHh
Confidence 2333222 235556666688899999999999999999
Q ss_pred cCCeEEEe---cCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360 242 VGLDTVLI---GKSQRVKGADYAFESIHNIKEAIPELWE 277 (298)
Q Consensus 242 aG~~~v~v---~~~~~~~~ad~i~~s~~~l~~~l~~~~~ 277 (298)
+|+..+-- ........+...++++.|+...|+++++
T Consensus 175 Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~~~~ 213 (214)
T TIGR03333 175 SDLCFARDYLLNECEELGLNHAPFQDFYDVRKELENVKE 213 (214)
T ss_pred CCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHHHhc
Confidence 99833311 1112345578889999999999988764
No 72
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.52 E-value=8e-13 Score=114.22 Aligned_cols=110 Identities=13% Similarity=0.071 Sum_probs=83.3
Q ss_pred CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360 98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 174 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (298)
..++|++.++|+.++ .+++|+|++....++..++++|++.+|...+...+-+.+.|
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g--------------------- 144 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTG--------------------- 144 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeC---------------------
Confidence 467899999998764 68999999999999999999999887766333211111111
Q ss_pred CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEec
Q 022360 175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG 250 (298)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~ 250 (298)
....++ ..+++|...++.++++.++++++|+++|||.+|+.+++.+|..++...
T Consensus 145 ------------~~~~~~----------~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 145 ------------NIDGNN----------CKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred ------------CccCCC----------CCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 000010 015788889999999999999999999999999999999998876543
No 73
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.51 E-value=9.4e-14 Score=117.27 Aligned_cols=102 Identities=19% Similarity=0.253 Sum_probs=78.0
Q ss_pred CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360 98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 174 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (298)
+.+.||+.++|+.++ .+++|+|++....++..++++|+..+|...+..++.+...|
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g--------------------- 130 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTG--------------------- 130 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeC---------------------
Confidence 557899999998774 77999999999999999999999888877766543222100
Q ss_pred CCCCCchhhhccccCC-CCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc
Q 022360 175 SANGPQIFDIIGHFAQ-PNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV 242 (298)
Q Consensus 175 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a 242 (298)
.... +++ .+..|+..+..++++++++++++++||||.+|+.|++.+
T Consensus 131 ------------~~~~~~~~----------~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 131 ------------PIEGQVNP----------EGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred ------------ccCCcccC----------CcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 0000 000 156778899999999999999999999999999999764
No 74
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.49 E-value=6.1e-14 Score=126.65 Aligned_cols=72 Identities=14% Similarity=0.110 Sum_probs=60.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhh
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELW 276 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~ 276 (298)
+..|+.+++.+++++|+++++|++|||+.||++|++.+|+++++.+... .+..|++++.+.++ +.++|++++
T Consensus 197 ~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 197 GNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 3667899999999999999999999999999999999999887764322 36789999988666 777777653
No 75
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.49 E-value=6.6e-13 Score=112.45 Aligned_cols=93 Identities=22% Similarity=0.298 Sum_probs=75.5
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCC-hHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNAD-KVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 174 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~-~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (298)
.++|++.++|+.| +.+++|+||+. ...+...++.+++..++ +.
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~------------------------ 89 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HA------------------------ 89 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CC------------------------
Confidence 4456777777666 47899999998 56666777777764221 11
Q ss_pred CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCC
Q 022360 175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~ 253 (298)
.||+|.++..++++++++|++|++|||+. .|+.+|+++|+.++++.++.
T Consensus 90 ------------------------------~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~ 139 (170)
T TIGR01668 90 ------------------------------VKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLV 139 (170)
T ss_pred ------------------------------CCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCc
Confidence 59999999999999999999999999998 79999999999999998776
Q ss_pred C
Q 022360 254 R 254 (298)
Q Consensus 254 ~ 254 (298)
.
T Consensus 140 ~ 140 (170)
T TIGR01668 140 H 140 (170)
T ss_pred C
Confidence 4
No 76
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.48 E-value=8e-14 Score=119.46 Aligned_cols=105 Identities=16% Similarity=0.298 Sum_probs=85.3
Q ss_pred HHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhc
Q 022360 106 SLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDII 185 (298)
Q Consensus 106 ~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (298)
..|...+++++|+|+.....+...++.+++..+|. +
T Consensus 58 ~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~--------g------------------------------------ 93 (183)
T PRK09484 58 RCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ--------G------------------------------------ 93 (183)
T ss_pred HHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec--------C------------------------------------
Confidence 34555678899999999999999999999877663 1
Q ss_pred cccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC--CCCCCCEEeC
Q 022360 186 GHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ--RVKGADYAFE 263 (298)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~--~~~~ad~i~~ 263 (298)
.++++..+..+++++|++|++|+||||+.+|+.+++++|+.++ ++... .+..+++++.
T Consensus 94 -------------------~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~~~~~~~~~~a~~v~~ 153 (183)
T PRK09484 94 -------------------QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VADAHPLLLPRADYVTR 153 (183)
T ss_pred -------------------CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cCChhHHHHHhCCEEec
Confidence 3677899999999999999999999999999999999999955 44332 3667899997
Q ss_pred ------CHHHHHHHhHH
Q 022360 264 ------SIHNIKEAIPE 274 (298)
Q Consensus 264 ------s~~~l~~~l~~ 274 (298)
.+.+|.+.|..
T Consensus 154 ~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 154 IAGGRGAVREVCDLLLL 170 (183)
T ss_pred CCCCCCHHHHHHHHHHH
Confidence 56777665543
No 77
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.48 E-value=5.3e-13 Score=124.89 Aligned_cols=112 Identities=17% Similarity=0.301 Sum_probs=87.1
Q ss_pred CCCCChhHHHHHHhCC---CcEEEEeCC---------------ChHHHHHHHHHhCCCCccceeEeec-----CCCCCCC
Q 022360 97 NLKPDPVLRSLLLSLP---LRKIIFTNA---------------DKVHAVKVLSRLGLEDCFEGIICFE-----TLNPTHK 153 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l~---~~~~ivS~~---------------~~~~~~~~l~~l~l~~~f~~i~~~~-----~~~~~~~ 153 (298)
...++||+.++|..|+ ++++|+||+ ....+..+++.+++. |+.++.+. +.+.
T Consensus 28 ~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~--- 102 (354)
T PRK05446 28 KLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSC--- 102 (354)
T ss_pred cceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCC---
Confidence 3688899999999885 679999995 234456677778874 66665442 2222
Q ss_pred CCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc
Q 022360 154 NTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV 233 (298)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~ 233 (298)
+||+|.++..++++++++|++++||||+.
T Consensus 103 ---------------------------------------------------rKP~p~~l~~a~~~l~v~~~~svmIGDs~ 131 (354)
T PRK05446 103 ---------------------------------------------------RKPKTGLVEEYLAEGAIDLANSYVIGDRE 131 (354)
T ss_pred ---------------------------------------------------CCCCHHHHHHHHHHcCCCcccEEEEcCCH
Confidence 79999999999999999999999999999
Q ss_pred cchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhH
Q 022360 234 RNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIP 273 (298)
Q Consensus 234 ~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~ 273 (298)
+|+++|+++|+.+++++... -+++++.+.|.
T Consensus 132 sDi~aAk~aGi~~I~v~~~~---------~~~~~i~~~l~ 162 (354)
T PRK05446 132 TDVQLAENMGIKGIRYARET---------LNWDAIAEQLT 162 (354)
T ss_pred HHHHHHHHCCCeEEEEECCC---------CCHHHHHHHHh
Confidence 99999999999999985422 34556665543
No 78
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.47 E-value=4.8e-14 Score=127.47 Aligned_cols=72 Identities=13% Similarity=0.099 Sum_probs=62.9
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhh
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELW 276 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~ 276 (298)
+-.|..+++.+++++|++++++++|||+.||++|.+.+|.+++|.+... .+..|++++.+.++ +.+.|++++
T Consensus 194 gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 194 RVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 4788899999999999999999999999999999999999999885544 58889999987655 888887764
No 79
>PRK10444 UMP phosphatase; Provisional
Probab=99.47 E-value=3e-13 Score=121.32 Aligned_cols=64 Identities=27% Similarity=0.407 Sum_probs=59.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHH
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNI 268 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l 268 (298)
+||+|.++..++++++++|++|+||||+. +||.+|+++|+.++++.+|.. ...++++++|+.+|
T Consensus 173 gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 173 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 79999999999999999999999999997 899999999999999988753 36799999999887
No 80
>PLN02645 phosphoglycolate phosphatase
Probab=99.47 E-value=3.4e-12 Score=118.18 Aligned_cols=69 Identities=17% Similarity=0.207 Sum_probs=62.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC----------CCCCCEEeCCHHHHHHHhH
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR----------VKGADYAFESIHNIKEAIP 273 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~----------~~~ad~i~~s~~~l~~~l~ 273 (298)
+||+|.++..+++++++++++++||||+. +||.+|+++|+.++++.+|.. ...|+++++++.+|.+++.
T Consensus 229 gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~ 308 (311)
T PLN02645 229 GKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKA 308 (311)
T ss_pred CCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhh
Confidence 69999999999999999999999999998 999999999999999977642 1468999999999987664
No 81
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.47 E-value=2.3e-12 Score=115.71 Aligned_cols=64 Identities=25% Similarity=0.370 Sum_probs=57.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC------C--CCCCEEeCCHHHH
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR------V--KGADYAFESIHNI 268 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~------~--~~ad~i~~s~~~l 268 (298)
+||+|.+++.+++++++++++++||||+. +||.+|+++|+.++++.++.. . ..|+++++++.++
T Consensus 177 gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 177 GKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred CCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 79999999999999999999999999997 899999999999999988752 1 4688999888763
No 82
>PRK10976 putative hydrolase; Provisional
Probab=99.45 E-value=1.6e-13 Score=123.90 Aligned_cols=72 Identities=13% Similarity=0.091 Sum_probs=61.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCC--EEeCCHHH--HHHHhHHhh
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGAD--YAFESIHN--IKEAIPELW 276 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad--~i~~s~~~--l~~~l~~~~ 276 (298)
+-.|..+++.+++++|++++++++|||+.||++|.+.+|.+++|.+... .+..|+ +++.+.++ +...|++++
T Consensus 188 gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 188 GVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 4778899999999999999999999999999999999999999886654 466665 77777655 888887765
No 83
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.44 E-value=5.5e-14 Score=127.43 Aligned_cols=73 Identities=8% Similarity=0.032 Sum_probs=61.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCE--EeCCHHH--HHHHhHHhhc
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADY--AFESIHN--IKEAIPELWE 277 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~--i~~s~~~--l~~~l~~~~~ 277 (298)
+-.|..+++.+++++|++++++++|||+.||++|.+.+|.+++|.+... .+..|++ ++.+.++ +..+|++++.
T Consensus 186 g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 186 GCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred CCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 3778899999999999999999999999999999999999999886544 4677765 6666554 8888988764
No 84
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.44 E-value=1.7e-12 Score=118.38 Aligned_cols=64 Identities=34% Similarity=0.460 Sum_probs=57.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC--------------CCCCCEEeCCHHHH
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------------VKGADYAFESIHNI 268 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~--------------~~~ad~i~~s~~~l 268 (298)
+||+|..+..++++++++|++|+||||+. +||.+|+++|+.++++.+|.. ...||++++++.+|
T Consensus 201 gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 201 GKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred CCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 79999999999999999999999999995 999999999999999988752 13689999998764
No 85
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.43 E-value=4.3e-13 Score=108.39 Aligned_cols=85 Identities=16% Similarity=0.163 Sum_probs=73.1
Q ss_pred CCChhHHHHHHhCC---CcEEEEeCC-ChHHHHHHHHHhC-------CCCccceeEeecCCCCCCCCCCCCChhhHHHHH
Q 022360 99 KPDPVLRSLLLSLP---LRKIIFTNA-DKVHAVKVLSRLG-------LEDCFEGIICFETLNPTHKNTVSDDEDDIAFVE 167 (298)
Q Consensus 99 ~~~~g~~~~L~~l~---~~~~ivS~~-~~~~~~~~l~~l~-------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (298)
.++||+.++|+.|+ ++++++|++ ....+...+++++ +.++|+.+++++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~--------------------- 87 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGY--------------------- 87 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcC---------------------
Confidence 56788899988874 778999999 8888888889888 788888887664
Q ss_pred hhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcC--CCCCcEEEEcCCccchHHHHH
Q 022360 168 SAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS--INPQRTLFFEDSVRNIQAGKR 241 (298)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~--i~p~~~i~iGDs~~Di~~a~~ 241 (298)
.+|+|+.+..+++++| ++|++|+||||+..|+...+.
T Consensus 88 -------------------------------------~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 88 -------------------------------------WLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred -------------------------------------CCcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 4788899999999999 999999999999999887654
No 86
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.42 E-value=2e-12 Score=114.87 Aligned_cols=96 Identities=18% Similarity=0.173 Sum_probs=75.5
Q ss_pred CCCCCChhHHHHHHhCC---CcEEEEeCC----ChHHHHHHHHHhCC--CCccceeEeecCCCCCCCCCCCCChhhHHHH
Q 022360 96 ENLKPDPVLRSLLLSLP---LRKIIFTNA----DKVHAVKVLSRLGL--EDCFEGIICFETLNPTHKNTVSDDEDDIAFV 166 (298)
Q Consensus 96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~----~~~~~~~~l~~l~l--~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~ 166 (298)
....|+||+.++|+.++ .+++++|+. .....+.+++.+|+ .++|+.+++.+..
T Consensus 111 ~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~------------------ 172 (237)
T PRK11009 111 EFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP------------------ 172 (237)
T ss_pred ccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC------------------
Confidence 34788999999999984 779999995 45567777788999 8889887776532
Q ss_pred HhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeE
Q 022360 167 ESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDT 246 (298)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~ 246 (298)
.||.+.. +++++++ +++|||+.+|+.+|+++|+.+
T Consensus 173 --------------------------------------~K~~K~~---~l~~~~i----~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 173 --------------------------------------GQYTKTQ---WLKKKNI----RIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred --------------------------------------CCCCHHH---HHHhcCC----eEEEcCCHHHHHHHHHcCCcE
Confidence 2555432 4556666 999999999999999999999
Q ss_pred EEecCCCC
Q 022360 247 VLIGKSQR 254 (298)
Q Consensus 247 v~v~~~~~ 254 (298)
+.+.++..
T Consensus 208 I~v~~G~~ 215 (237)
T PRK11009 208 IRILRAAN 215 (237)
T ss_pred EEEecCCC
Confidence 99977653
No 87
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.42 E-value=9e-12 Score=112.29 Aligned_cols=229 Identities=22% Similarity=0.281 Sum_probs=131.2
Q ss_pred cccCccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhCCCHH----HHHH-ccCCCChhh
Q 022360 10 AAAKYDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEKLGIERSKIEDLGNLLYKNYGTTMA----GLRA-IGYDFDYDD 84 (298)
Q Consensus 10 ~~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~----~~~~-~~~~~~~~~ 84 (298)
.++++++++||+||||++....+..+.. .++. ++..|++.--.. ++..++.. .+.. .+.+.+++.
T Consensus 4 ~~~~y~~~l~DlDGvl~~G~~~ipga~e-~l~~--L~~~g~~~iflT-------Nn~~~s~~~~~~~L~~~~~~~~~~~~ 73 (269)
T COG0647 4 VMDKYDGFLFDLDGVLYRGNEAIPGAAE-ALKR--LKAAGKPVIFLT-------NNSTRSREVVAARLSSLGGVDVTPDD 73 (269)
T ss_pred hhhhcCEEEEcCcCceEeCCccCchHHH-HHHH--HHHcCCeEEEEe-------CCCCCCHHHHHHHHHhhcCCCCCHHH
Confidence 3567899999999999998887776654 3333 344455321110 00011111 1122 233333333
Q ss_pred H-------HHHhhcccCCC--CCCCChhHHHHHHhCCC-------c----EEEEeCCChHHHHHHHHHh-CCCCccceeE
Q 022360 85 Y-------HSFVHGRLPYE--NLKPDPVLRSLLLSLPL-------R----KIIFTNADKVHAVKVLSRL-GLEDCFEGII 143 (298)
Q Consensus 85 ~-------~~~~~~~~~~~--~~~~~~g~~~~L~~l~~-------~----~~ivS~~~~~~~~~~l~~l-~l~~~f~~i~ 143 (298)
+ .+++.+..... -+.-.+++.+.|+.++. . .+++........+.+.+.+ .+..-...+.
T Consensus 74 i~TS~~at~~~l~~~~~~~kv~viG~~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~ 153 (269)
T COG0647 74 IVTSGDATADYLAKQKPGKKVYVIGEEGLKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIA 153 (269)
T ss_pred eecHHHHHHHHHHhhCCCCEEEEECCcchHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEE
Confidence 2 22233211101 12235788888888862 1 2344333333333322222 1122234455
Q ss_pred eecCCCCCCCCCCCCChh-hHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCC
Q 022360 144 CFETLNPTHKNTVSDDED-DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASIN 222 (298)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~ 222 (298)
+..|..++.+....-+.+ ..+.++.+...+ +.+ .+||.+.+++.++++++.+
T Consensus 154 tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~-----~~~----------------------~GKP~~~i~~~al~~~~~~ 206 (269)
T COG0647 154 TNPDLTVPTERGLRPGAGAIAALLEQATGRE-----PTV----------------------IGKPSPAIYEAALEKLGLD 206 (269)
T ss_pred eCCCccccCCCCCccCcHHHHHHHHHhhCCc-----ccc----------------------cCCCCHHHHHHHHHHhCCC
Confidence 666665533322211222 223322211111 122 2899999999999999999
Q ss_pred CCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHHHHHhHHh
Q 022360 223 PQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNIKEAIPEL 275 (298)
Q Consensus 223 p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l~~~l~~~ 275 (298)
+++++||||+. +||.+|+++|+.+++|..|.. ...++++++|+.++...+.++
T Consensus 207 ~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~~~~ 268 (269)
T COG0647 207 RSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITALKEL 268 (269)
T ss_pred cccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhhhcc
Confidence 99999999999 999999999999999977753 466899999999988776543
No 88
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.41 E-value=8.6e-14 Score=115.21 Aligned_cols=93 Identities=15% Similarity=0.089 Sum_probs=81.9
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCC-ccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360 97 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLED-CFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 173 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (298)
...++||+.++|.+|+ ++++|+|++...+++.+++++++.. +|+.+++.++...
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~----------------------- 99 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF----------------------- 99 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc-----------------------
Confidence 3577899999999996 6789999999999999999999865 5688999887654
Q ss_pred CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeE
Q 022360 174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDT 246 (298)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~ 246 (298)
.||+ +.++++++|.+|++|++|||+.+|++++.++|+..
T Consensus 100 -------------------------------~KP~---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 100 -------------------------------VKGK---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred -------------------------------cCCe---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 5775 88999999999999999999999999999988764
No 89
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.41 E-value=2.5e-13 Score=119.24 Aligned_cols=70 Identities=24% Similarity=0.227 Sum_probs=59.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH------HHHHhHH
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN------IKEAIPE 274 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~------l~~~l~~ 274 (298)
+.+|+.+++.+++++|++++++++|||+.||+.|++.+|+.++|.+... .+..|++++.+.++ +.++|++
T Consensus 147 ~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~~ 223 (225)
T TIGR01482 147 GVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQA 223 (225)
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHHh
Confidence 5788899999999999999999999999999999999999998885543 47889999876554 5555554
No 90
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.41 E-value=1.5e-12 Score=119.68 Aligned_cols=109 Identities=17% Similarity=0.193 Sum_probs=90.4
Q ss_pred CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCC-ccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360 98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLED-CFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 173 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (298)
..++|++.++|+.|+ .+++++|+.+....+..++++++.+ +|+.+++.++...+
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~---------------------- 243 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHF---------------------- 243 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhh----------------------
Confidence 467899999988874 7799999999999999999999987 89988877632210
Q ss_pred CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCC-CCCcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360 174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASI-NPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 252 (298)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i-~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~ 252 (298)
+... ..+||+|..+..++++++. +|++|++|||+.+|+.+|+++|+.++++.+|
T Consensus 244 ------------------------~~~~-~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 244 ------------------------QREQ-GDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred ------------------------cccC-CCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 0000 0169999999999999988 6799999999999999999999999999876
Q ss_pred C
Q 022360 253 Q 253 (298)
Q Consensus 253 ~ 253 (298)
.
T Consensus 299 ~ 299 (300)
T PHA02530 299 D 299 (300)
T ss_pred C
Confidence 4
No 91
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.40 E-value=6.2e-13 Score=119.93 Aligned_cols=73 Identities=22% Similarity=0.272 Sum_probs=63.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhhc
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELWE 277 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~~ 277 (298)
+..|..+++.+++++|++++++++|||+.||++|.+.+|.+++|.+..+ .+..|+++..+.++ +.+.|++++.
T Consensus 187 g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 187 GVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred CCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 4888899999999999999999999999999999999999999987644 47888877777665 8888887653
No 92
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.38 E-value=4e-13 Score=116.34 Aligned_cols=87 Identities=22% Similarity=0.306 Sum_probs=73.0
Q ss_pred CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360 98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 174 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (298)
.+++|++.++|+.|+ ++++++|+.....+....+.+|+.+ .++..+..
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~---~~v~a~~~-------------------------- 176 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD---SIVFARVI-------------------------- 176 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS---EEEEESHE--------------------------
T ss_pred CcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc---cccccccc--------------------------
Confidence 456789999988874 6799999999999999999999943 23332200
Q ss_pred CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC
Q 022360 175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG 243 (298)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG 243 (298)
+||.+.++..+++++++++.+|+||||+.||+.|+++||
T Consensus 177 ------------------------------~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 177 ------------------------------GKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ------------------------------TTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ------------------------------ccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 289999999999999999999999999999999999987
No 93
>PLN02887 hydrolase family protein
Probab=99.37 E-value=6.6e-13 Score=131.57 Aligned_cols=72 Identities=15% Similarity=0.118 Sum_probs=62.9
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH--HHHHhHHhh
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN--IKEAIPELW 276 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~--l~~~l~~~~ 276 (298)
+-.|..+++.+++++|++++++++|||+.||++|.+.+|.+++|.+... .+..|++++.+.++ +.++|++++
T Consensus 505 gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 505 GTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 4788899999999999999999999999999999999999999886654 48889999987665 777777654
No 94
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.35 E-value=3e-12 Score=116.26 Aligned_cols=72 Identities=15% Similarity=0.066 Sum_probs=58.3
Q ss_pred CCCCHHHHHHHHHHcCCCC-CcEEEEcCCccchHHHHHcCCeEEEecCCCC-C----CCC-CEEe--CC--HHHHHHHhH
Q 022360 205 CKPSELAIEKALKIASINP-QRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR-V----KGA-DYAF--ES--IHNIKEAIP 273 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p-~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~-~----~~a-d~i~--~s--~~~l~~~l~ 273 (298)
+ .|..+++++++++|+++ +++++|||+.||++|++.+|++++|.+.... + ..+ +.++ .+ -+.+.+.|+
T Consensus 189 ~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 189 G-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred C-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 5 77889999999999999 9999999999999999999999999876544 4 444 5666 34 335777777
Q ss_pred Hhhc
Q 022360 274 ELWE 277 (298)
Q Consensus 274 ~~~~ 277 (298)
++++
T Consensus 268 ~~~~ 271 (273)
T PRK00192 268 KLLS 271 (273)
T ss_pred HHHh
Confidence 7653
No 95
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.35 E-value=4.7e-13 Score=117.16 Aligned_cols=62 Identities=19% Similarity=0.227 Sum_probs=53.9
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHH
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIH 266 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~ 266 (298)
+..|..+++.+++++|++++++++|||+.||++|++.+|+.++|.+... .+..|++++.+.+
T Consensus 145 ~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~~~ 207 (215)
T TIGR01487 145 GVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSNPY 207 (215)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCCCC
Confidence 4777899999999999999999999999999999999999999885544 4777898887543
No 96
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.33 E-value=8.2e-12 Score=103.12 Aligned_cols=81 Identities=23% Similarity=0.429 Sum_probs=70.7
Q ss_pred HHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccc
Q 022360 108 LLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGH 187 (298)
Q Consensus 108 L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (298)
++..+++++|+||....-+....+++++. .+..
T Consensus 58 ~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~~------------------------------------------- 90 (175)
T COG2179 58 LKEAGIKVVVVSNNKESRVARAAEKLGVP----FIYR------------------------------------------- 90 (175)
T ss_pred HHhcCCEEEEEeCCCHHHHHhhhhhcCCc----eeec-------------------------------------------
Confidence 44456889999999999999999999875 2332
Q ss_pred cCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecC
Q 022360 188 FAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGK 251 (298)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~ 251 (298)
+.||-+..|.++++++++++++|+||||.+ +|+.+++.+|+.+++|..
T Consensus 91 ----------------A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 91 ----------------AKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred ----------------ccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 269999999999999999999999999998 999999999999999854
No 97
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.33 E-value=5.1e-12 Score=92.44 Aligned_cols=65 Identities=31% Similarity=0.490 Sum_probs=59.6
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCC-ccchHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHH
Q 022360 204 ACKPSELAIEKALKIASINPQRTLFFEDS-VRNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNI 268 (298)
Q Consensus 204 ~~kp~~~~~~~~l~~l~i~p~~~i~iGDs-~~Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l 268 (298)
++||+|.++..+++++++++++|++|||+ .+||.+|+++|+.++++.++.. ...|+++++++.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 37999999999999999999999999999 7999999999999999987653 36899999999875
No 98
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=99.30 E-value=1.2e-10 Score=108.42 Aligned_cols=68 Identities=13% Similarity=0.145 Sum_probs=57.3
Q ss_pred CCCCHHHHHHHHHHc--------CC-----CCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC-------CCCCCEEeC
Q 022360 205 CKPSELAIEKALKIA--------SI-----NPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR-------VKGADYAFE 263 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l--------~i-----~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~-------~~~ad~i~~ 263 (298)
+||++..|+.+++.+ +. ++++++||||+. +||.+|+++||.++++.+|.. ...++++++
T Consensus 232 GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~vv~ 311 (321)
T TIGR01456 232 GKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLIVN 311 (321)
T ss_pred CCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEEEC
Confidence 899999999988887 43 457999999998 999999999999999977621 235899999
Q ss_pred CHHHHHHHh
Q 022360 264 SIHNIKEAI 272 (298)
Q Consensus 264 s~~~l~~~l 272 (298)
|+.++.+.|
T Consensus 312 ~l~e~~~~i 320 (321)
T TIGR01456 312 DVFDAVTKI 320 (321)
T ss_pred CHHHHHHHh
Confidence 999987654
No 99
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.28 E-value=1e-11 Score=112.67 Aligned_cols=73 Identities=11% Similarity=0.072 Sum_probs=61.2
Q ss_pred CCCCHHHHHHHHHHcCC---CCCcEEEEcCCccchHHHHHcCCeEEEecCC-C------CCCCCCEEeCCHH--HHHHHh
Q 022360 205 CKPSELAIEKALKIASI---NPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-Q------RVKGADYAFESIH--NIKEAI 272 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i---~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~------~~~~ad~i~~s~~--~l~~~l 272 (298)
+-.|..+++.+++.+|+ +++++++|||+.||++|.+.+|.+++|.+.. . .+..+++++.... .+.+.|
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 47888999999999999 9999999999999999999999999988433 1 2346888888766 588888
Q ss_pred HHhhc
Q 022360 273 PELWE 277 (298)
Q Consensus 273 ~~~~~ 277 (298)
+.++.
T Consensus 265 ~~~~~ 269 (271)
T PRK03669 265 DHFFS 269 (271)
T ss_pred HHHHh
Confidence 77663
No 100
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.24 E-value=3.9e-10 Score=99.84 Aligned_cols=156 Identities=19% Similarity=0.261 Sum_probs=102.9
Q ss_pred CChhhHHHHhhcccCCCCCCCChhHHHHHHhC-----CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCC
Q 022360 80 FDYDDYHSFVHGRLPYENLKPDPVLRSLLLSL-----PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKN 154 (298)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l-----~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~ 154 (298)
...+++.+.+.. +++.||+.++++.+ +..++|+|.+....++.++++.|+...|+.|++....-.-
T Consensus 58 vt~~~I~~~l~~------ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~--- 128 (234)
T PF06888_consen 58 VTPEDIRDALRS------IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDA--- 128 (234)
T ss_pred CCHHHHHHHHHc------CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecC---
Confidence 456777766644 78889999999988 2568999999999999999999999999999887421100
Q ss_pred CCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHc---CCCCCcEEEEcC
Q 022360 155 TVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIA---SINPQRTLFFED 231 (298)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l---~i~p~~~i~iGD 231 (298)
.+.+ .+..++- | .|+.-+ + +-=|...++.+++.. |...++++||||
T Consensus 129 -----~G~l--------------~v~pyh~--h-~C~~C~-------~--NmCK~~il~~~~~~~~~~g~~~~rviYiGD 177 (234)
T PF06888_consen 129 -----DGRL--------------RVRPYHS--H-GCSLCP-------P--NMCKGKILERLLQEQAQRGVPYDRVIYIGD 177 (234)
T ss_pred -----CceE--------------EEeCccC--C-CCCcCC-------C--ccchHHHHHHHHHHHhhcCCCcceEEEECC
Confidence 0000 0001111 0 011100 0 112347788888763 778899999999
Q ss_pred CccchHHHHHcCCe-EEEecCCCC----------C-CCCCEEeCCHHHHHHHhHHh
Q 022360 232 SVRNIQAGKRVGLD-TVLIGKSQR----------V-KGADYAFESIHNIKEAIPEL 275 (298)
Q Consensus 232 s~~Di~~a~~aG~~-~v~v~~~~~----------~-~~ad~i~~s~~~l~~~l~~~ 275 (298)
+.||+-.+.+.+-. .++...++. . ...=....+-+||.+.|.++
T Consensus 178 G~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W~~g~~i~~~l~~~ 233 (234)
T PF06888_consen 178 GRNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPWSSGEEILEILLQL 233 (234)
T ss_pred CCCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEecCCHHHHHHHHHhh
Confidence 99999999987765 566655542 1 11223556777777777664
No 101
>PRK11590 hypothetical protein; Provisional
Probab=99.24 E-value=1.3e-10 Score=101.58 Aligned_cols=103 Identities=11% Similarity=-0.051 Sum_probs=70.2
Q ss_pred CCCChhHHHHHH-hC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360 98 LKPDPVLRSLLL-SL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 173 (298)
Q Consensus 98 ~~~~~g~~~~L~-~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (298)
..++||+.++|+ .+ +.+++|+|++....++..++++++.. .+.+++.+-...
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~----------------------- 149 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRR----------------------- 149 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEE-----------------------
Confidence 466999999994 44 46899999999999999999998633 344554431101
Q ss_pred CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEE
Q 022360 174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTV 247 (298)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v 247 (298)
..|...++|- .+..|...++.++ +.+...+.+.|||.+|+.|...+|-+.+
T Consensus 150 ----------~tg~~~g~~c----------~g~~K~~~l~~~~---~~~~~~~~aY~Ds~~D~pmL~~a~~~~~ 200 (211)
T PRK11590 150 ----------YGGWVLTLRC----------LGHEKVAQLERKI---GTPLRLYSGYSDSKQDNPLLYFCQHRWR 200 (211)
T ss_pred ----------EccEECCccC----------CChHHHHHHHHHh---CCCcceEEEecCCcccHHHHHhCCCCEE
Confidence 1111122211 1455555555554 5567788999999999999999997766
No 102
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=99.21 E-value=1.5e-10 Score=104.18 Aligned_cols=68 Identities=28% Similarity=0.400 Sum_probs=59.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC------------CCCCCEEeCCHHHHHHH
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR------------VKGADYAFESIHNIKEA 271 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~------------~~~ad~i~~s~~~l~~~ 271 (298)
+||++.++..++++++++|++|+||||+. +||.-+++.|+.++++..|-. ...|||.++++.++...
T Consensus 223 GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~~~ 302 (306)
T KOG2882|consen 223 GKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLLPL 302 (306)
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHhhh
Confidence 89999999999999999999999999999 899999999999999866532 34578888888777654
Q ss_pred h
Q 022360 272 I 272 (298)
Q Consensus 272 l 272 (298)
+
T Consensus 303 ~ 303 (306)
T KOG2882|consen 303 L 303 (306)
T ss_pred c
Confidence 4
No 103
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.20 E-value=1.4e-10 Score=97.91 Aligned_cols=126 Identities=13% Similarity=0.122 Sum_probs=88.0
Q ss_pred CCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCC--ccceeEeecCCCCCCCCCCCCChhhHHHHHhhh
Q 022360 96 ENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLED--CFEGIICFETLNPTHKNTVSDDEDDIAFVESAA 170 (298)
Q Consensus 96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~--~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (298)
+.....||+.++.+.|+ .+++++|++..+.+.++.+.||+.. .+...+.++..|.|.|-+.
T Consensus 85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~-------------- 150 (227)
T KOG1615|consen 85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDT-------------- 150 (227)
T ss_pred CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCccccccc--------------
Confidence 34567889988888775 7899999999999999999999965 7778887777776544111
Q ss_pred cccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEec
Q 022360 171 STTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG 250 (298)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~ 250 (298)
... +.. +-.|+..+..+.+ +.+...++||||+.||+++... | .++++
T Consensus 151 ----------------~~p-------tsd-----sggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~p-a--~afi~ 197 (227)
T KOG1615|consen 151 ----------------NEP-------TSD-----SGGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPP-A--DAFIG 197 (227)
T ss_pred ----------------CCc-------ccc-----CCccHHHHHHHHh--CCChheeEEecCCccccccCCc-h--hhhhc
Confidence 011 111 3455678888877 7777899999999999998766 2 23333
Q ss_pred CCC------CCCCCCEEeCCHHHH
Q 022360 251 KSQ------RVKGADYAFESIHNI 268 (298)
Q Consensus 251 ~~~------~~~~ad~i~~s~~~l 268 (298)
.+. .+..+++.+.++..|
T Consensus 198 ~~g~~~r~~vk~nak~~~~~f~~L 221 (227)
T KOG1615|consen 198 FGGNVIREGVKANAKWYVTDFYVL 221 (227)
T ss_pred cCCceEcHhhHhccHHHHHHHHHH
Confidence 333 245555555555444
No 104
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.15 E-value=9.3e-11 Score=109.04 Aligned_cols=87 Identities=17% Similarity=0.143 Sum_probs=77.0
Q ss_pred CChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHH----hCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360 100 PDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSR----LGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 172 (298)
Q Consensus 100 ~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~----l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (298)
+++++.++|+.|+ +.++|+|+.+...+...+++ +++.++|+.+...
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~--------------------------- 84 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN--------------------------- 84 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe---------------------------
Confidence 4788888888874 67899999999999999998 8888899887553
Q ss_pred cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCe
Q 022360 173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLD 245 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~ 245 (298)
.||||+.+..+++++|+.+++++||||+..|+.++++++-.
T Consensus 85 --------------------------------~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 --------------------------------WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred --------------------------------cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 38999999999999999999999999999999999997754
No 105
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.14 E-value=1.1e-10 Score=102.43 Aligned_cols=44 Identities=11% Similarity=-0.001 Sum_probs=40.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEE
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL 248 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~ 248 (298)
+-.|+.+++.+++++|+++++|++|||+.||+.|++.+|.+++.
T Consensus 177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 45677899999999999999999999999999999999988763
No 106
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.13 E-value=6.9e-11 Score=106.12 Aligned_cols=63 Identities=16% Similarity=0.187 Sum_probs=53.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CCCCCCCEEeCCHHH
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QRVKGADYAFESIHN 267 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~~~~ad~i~~s~~~ 267 (298)
+-.|..+++.++++++++++++++|||+.||+.|++.+|+++++.+.. ..+..|++++.+.++
T Consensus 186 ~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 186 GVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNE 249 (256)
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCC
Confidence 477889999999999999999999999999999999999998886433 346778888877543
No 107
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.11 E-value=3.9e-09 Score=98.43 Aligned_cols=129 Identities=20% Similarity=0.183 Sum_probs=84.0
Q ss_pred CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHh-C-------CCCccceeEeecCCCCCCCCCCCCChhhHHH
Q 022360 97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRL-G-------LEDCFEGIICFETLNPTHKNTVSDDEDDIAF 165 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l-~-------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (298)
.+.+.||+.++|+.|+ ++++|+||+...+++..++.+ + +.++||.+++...-..+
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~F-------------- 247 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGF-------------- 247 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcc--------------
Confidence 3566899999998874 789999999999999999996 7 88999999887543210
Q ss_pred HHhhhcccCCCCCCchhhhccccCCCCCCccc-CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHH-Hc
Q 022360 166 VESAASTTTSANGPQIFDIIGHFAQPNPSLVA-LPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGK-RV 242 (298)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~-~a 242 (298)
.+.++..-++-.-.+.. .+ +.+. +.+|....- -.+..+.+.+++.+++++||||+. .||..++ .+
T Consensus 248 ------F~~~~pf~~v~~~~g~~-~~--~~~~~l~~g~vY~g---Gn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~ 315 (343)
T TIGR02244 248 ------FTEGRPFRQVDVETGSL-KW--GEVDGLEPGKVYSG---GSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKR 315 (343)
T ss_pred ------cCCCCceEEEeCCCCcc-cC--CccccccCCCeEeC---CCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhc
Confidence 00000000000000000 00 0000 111111112 235667778899999999999999 9999998 99
Q ss_pred CCeEEEecC
Q 022360 243 GLDTVLIGK 251 (298)
Q Consensus 243 G~~~v~v~~ 251 (298)
||.++++..
T Consensus 316 Gw~TvlI~p 324 (343)
T TIGR02244 316 GWRTAAIIP 324 (343)
T ss_pred CcEEEEEch
Confidence 999998744
No 108
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.09 E-value=2.5e-09 Score=90.82 Aligned_cols=68 Identities=24% Similarity=0.345 Sum_probs=57.6
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCC-----CCCCCEEeCCHHHHHHH
Q 022360 204 ACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR-----VKGADYAFESIHNIKEA 271 (298)
Q Consensus 204 ~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~-----~~~ad~i~~s~~~l~~~ 271 (298)
++||++-++..+++++++++++.++|||+.+|+++|.++|+..+.+..+.. ....+.+++++.++...
T Consensus 103 cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (181)
T COG0241 103 CRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFANL 175 (181)
T ss_pred ccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHHHH
Confidence 589999999999999999999999999999999999999999877755432 23467788888777633
No 109
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.09 E-value=1.6e-09 Score=98.08 Aligned_cols=118 Identities=10% Similarity=0.044 Sum_probs=81.8
Q ss_pred cCCCChhhHHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeec----CCC
Q 022360 77 GYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFE----TLN 149 (298)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~----~~~ 149 (298)
+..++.+.+.+.+.+ ..+.+.||+.++++.|+ ++++|+|++....++.+++++++...+..+++.. +.+
T Consensus 103 ~~~~~~e~i~~~v~~----~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dG 178 (277)
T TIGR01544 103 QQAFPKAKIKEIVAE----SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDG 178 (277)
T ss_pred cCCCCHHHHHHHHhh----cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCC
Confidence 445556666666653 45788999999998874 7899999999999999999999875555553321 111
Q ss_pred CCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCH-HHHHHHHHHcC--CCCCcE
Q 022360 150 PTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSE-LAIEKALKIAS--INPQRT 226 (298)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~-~~~~~~l~~l~--i~p~~~ 226 (298)
...| ++.+.++.-.|. ..++.+.+.++ ..+++|
T Consensus 179 vltG--------------------------------------------~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~v 214 (277)
T TIGR01544 179 VLKG--------------------------------------------FKGPLIHTFNKNHDVALRNTEYFNQLKDRSNI 214 (277)
T ss_pred eEeC--------------------------------------------CCCCcccccccHHHHHHHHHHHhCccCCcceE
Confidence 1101 010011122333 45667888888 899999
Q ss_pred EEEcCCccchHHHHHc
Q 022360 227 LFFEDSVRNIQAGKRV 242 (298)
Q Consensus 227 i~iGDs~~Di~~a~~a 242 (298)
+++|||.+|+.||.-+
T Consensus 215 I~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 215 ILLGDSQGDLRMADGV 230 (277)
T ss_pred EEECcChhhhhHhcCC
Confidence 9999999999997665
No 110
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.05 E-value=7.5e-11 Score=96.39 Aligned_cols=97 Identities=23% Similarity=0.346 Sum_probs=80.4
Q ss_pred HHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhh
Q 022360 105 RSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDI 184 (298)
Q Consensus 105 ~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (298)
..+|..++++++|+|+.+...++...+.+|+..+|-+
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG------------------------------------------- 80 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQG------------------------------------------- 80 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeec-------------------------------------------
Confidence 4678889999999999999999999999999765422
Q ss_pred ccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCCCCCCCEEeC
Q 022360 185 IGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQRVKGADYAFE 263 (298)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~~~~ad~i~~ 263 (298)
.+.|..++..+++++++.+++|.|+||..+|+..+..+|++++.... +..+..++|+..
T Consensus 81 --------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~ 140 (170)
T COG1778 81 --------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTS 140 (170)
T ss_pred --------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhh
Confidence 35667999999999999999999999999999999999999875432 233566677655
Q ss_pred C
Q 022360 264 S 264 (298)
Q Consensus 264 s 264 (298)
.
T Consensus 141 ~ 141 (170)
T COG1778 141 K 141 (170)
T ss_pred c
Confidence 3
No 111
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.05 E-value=5.1e-09 Score=90.24 Aligned_cols=164 Identities=14% Similarity=0.220 Sum_probs=106.4
Q ss_pred ChhhHHHHhhcccCCCCCCCChhHHHHHHhCC----CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCC
Q 022360 81 DYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP----LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTV 156 (298)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~----~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~ 156 (298)
..+++.+.+. .++..||+.++++.+. +.+.|+|..+...++..++++++.++|..|++....--
T Consensus 72 ~~~~ik~~~r------~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~d------ 139 (256)
T KOG3120|consen 72 RIAEIKQVLR------SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVD------ 139 (256)
T ss_pred CHHHHHHHHh------cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccC------
Confidence 3555555543 4788999999999874 46789999999999999999999999998887653211
Q ss_pred CCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHH---HcCCCCCcEEEEcCCc
Q 022360 157 SDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALK---IASINPQRTLFFEDSV 233 (298)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~---~l~i~p~~~i~iGDs~ 233 (298)
..+-+ .+..++-++.=..-++++ ||. ..+..+.. +-|+..++++|+||+-
T Consensus 140 --a~G~L--------------~v~pyH~~hsC~~CPsNm---------CKg--~Vl~~~~~s~~~~gv~yer~iYvGDG~ 192 (256)
T KOG3120|consen 140 --ASGRL--------------LVRPYHTQHSCNLCPSNM---------CKG--LVLDELVASQLKDGVRYERLIYVGDGA 192 (256)
T ss_pred --CCCcE--------------EeecCCCCCccCcCchhh---------hhh--HHHHHHHHHHhhcCCceeeEEEEcCCC
Confidence 00000 111222212111122222 343 34444433 4577888999999999
Q ss_pred cchHHHHHc-CCeEEEecCCCC-----------CCCCCEEeCCHHHHHHHhHHhhccCcccc
Q 022360 234 RNIQAGKRV-GLDTVLIGKSQR-----------VKGADYAFESIHNIKEAIPELWESDMKSE 283 (298)
Q Consensus 234 ~Di~~a~~a-G~~~v~v~~~~~-----------~~~ad~i~~s~~~l~~~l~~~~~~~~~~~ 283 (298)
||+-..... +..+++..++.. ....-....|-.|+...|.+++...+.++
T Consensus 193 nD~CP~l~Lr~~D~ampRkgfpl~k~~~~~p~~~kasV~~W~sg~d~~~~L~~lik~~~~~~ 254 (256)
T KOG3120|consen 193 NDFCPVLRLRACDVAMPRKGFPLWKLISANPMLLKASVLEWSSGEDLERILQQLIKTIQVEE 254 (256)
T ss_pred CCcCcchhcccCceecccCCCchHhhhhcCcceeeeeEEecccHHHHHHHHHHHHHHhhhcc
Confidence 999876655 556777766653 12234467788889988888877665543
No 112
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=99.04 E-value=4.1e-09 Score=93.88 Aligned_cols=48 Identities=29% Similarity=0.487 Sum_probs=45.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcE-EEEcCCc-cchHHHHHcCCeEEEecCC
Q 022360 205 CKPSELAIEKALKIASINPQRT-LFFEDSV-RNIQAGKRVGLDTVLIGKS 252 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~-i~iGDs~-~Di~~a~~aG~~~v~v~~~ 252 (298)
+||++..++.++++++++++++ +||||+. +||.+|+++|+.++++.+|
T Consensus 187 ~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 187 GKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred cCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 7999999999999999998887 9999998 8999999999999998664
No 113
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.03 E-value=1.5e-09 Score=106.46 Aligned_cols=89 Identities=22% Similarity=0.263 Sum_probs=71.8
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCCh------------HHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHH
Q 022360 100 PDPVLRSLLLSL---PLRKIIFTNADK------------VHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIA 164 (298)
Q Consensus 100 ~~~g~~~~L~~l---~~~~~ivS~~~~------------~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 164 (298)
++||+.+.|+.| +++++|+||... ..+..+++.+|+. |+.+++.+....
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~-------------- 261 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFY-------------- 261 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCC--------------
Confidence 467788888777 588999999766 3577888888885 776665543322
Q ss_pred HHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcC----CCCCcEEEEcCCccchHHHH
Q 022360 165 FVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIAS----INPQRTLFFEDSVRNIQAGK 240 (298)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~----i~p~~~i~iGDs~~Di~~a~ 240 (298)
+||+|.++..++++++ +++++++||||...|+.+++
T Consensus 262 ----------------------------------------RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~ 301 (526)
T TIGR01663 262 ----------------------------------------RKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGK 301 (526)
T ss_pred ----------------------------------------CCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHH
Confidence 7999999999999985 89999999999999998877
Q ss_pred HcCC
Q 022360 241 RVGL 244 (298)
Q Consensus 241 ~aG~ 244 (298)
++|-
T Consensus 302 ~ag~ 305 (526)
T TIGR01663 302 AAGK 305 (526)
T ss_pred hcCC
Confidence 7764
No 114
>PRK08238 hypothetical protein; Validated
Probab=99.03 E-value=5.5e-09 Score=101.91 Aligned_cols=96 Identities=17% Similarity=0.209 Sum_probs=72.5
Q ss_pred CCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360 97 NLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 173 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (298)
.++..|++.++|+.++ .+++++|+++...++..++++|+ |+.++++++...
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~----------------------- 123 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTN----------------------- 123 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccc-----------------------
Confidence 4567799999999874 67899999999999999999987 888998875432
Q ss_pred CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360 174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~ 253 (298)
+||++.. ..+.+.++ .++++++||+.+|+.+++.+| ..+.++.+.
T Consensus 124 -------------------------------~kg~~K~-~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 124 -------------------------------LKGAAKA-AALVEAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred -------------------------------cCCchHH-HHHHHHhC--ccCeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence 3443332 22335554 356899999999999999999 555565543
No 115
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.03 E-value=6.1e-10 Score=100.14 Aligned_cols=71 Identities=15% Similarity=0.075 Sum_probs=58.3
Q ss_pred CCCCHHHHHHHHHHcCCC--CCcEEEEcCCccchHHHHHcCCeEEEecCC----CCCCC--C-CEEeCCHHH--HHHHhH
Q 022360 205 CKPSELAIEKALKIASIN--PQRTLFFEDSVRNIQAGKRVGLDTVLIGKS----QRVKG--A-DYAFESIHN--IKEAIP 273 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~--p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~----~~~~~--a-d~i~~s~~~--l~~~l~ 273 (298)
+-+|..+++++++++|++ ++++++|||+.||+.|++.+|.+++|.+.. ..+.. + ++++.+.++ +.+.|+
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 477889999999999999 999999999999999999999999998765 34554 3 488866443 777776
Q ss_pred Hh
Q 022360 274 EL 275 (298)
Q Consensus 274 ~~ 275 (298)
++
T Consensus 254 ~~ 255 (256)
T TIGR01486 254 HL 255 (256)
T ss_pred Hh
Confidence 65
No 116
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.02 E-value=4.1e-11 Score=105.58 Aligned_cols=63 Identities=24% Similarity=0.266 Sum_probs=55.7
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCCEEeCCHHH
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGADYAFESIHN 267 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad~i~~s~~~ 267 (298)
+-.|..+++.+++.+|++++++++|||+.||+.|.+.+|.++++.+..+ .+..|++++.+.++
T Consensus 184 ~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 184 GVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp TSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTC
T ss_pred CCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCC
Confidence 4778899999999999999999999999999999999999988875544 48889999988776
No 117
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.94 E-value=2.1e-09 Score=95.45 Aligned_cols=70 Identities=17% Similarity=0.068 Sum_probs=56.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-CCCCCC----EEeCCHH--HHHHHhHH
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-RVKGAD----YAFESIH--NIKEAIPE 274 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~~~~ad----~i~~s~~--~l~~~l~~ 274 (298)
+.+|+.+++.+++++|++++++++|||+.||+.|++.+|.++++.+... .+..++ +++.+.. .+.+.|.+
T Consensus 157 ~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 157 RASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 5899999999999999999999999999999999999998888764433 355566 6666532 36666654
No 118
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=98.93 E-value=6e-08 Score=84.92 Aligned_cols=104 Identities=10% Similarity=-0.014 Sum_probs=68.5
Q ss_pred CCCChhHHHHHH-hC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360 98 LKPDPVLRSLLL-SL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 173 (298)
Q Consensus 98 ~~~~~g~~~~L~-~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (298)
..++|++.+.|+ .+ +.+++|+|++...+++.+.+..++... +.+++.+ +....|
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~-le~~~g-------------------- 150 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQ-IERGNG-------------------- 150 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEE-eEEeCC--------------------
Confidence 367999999995 43 578999999999999999988766432 3344432 111000
Q ss_pred CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEE
Q 022360 174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL 248 (298)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~ 248 (298)
|...++| -.+..|...++.++ +.+...+.+.|||.+|+.|...+|-+.+.
T Consensus 151 ------------g~~~g~~----------c~g~~Kv~rl~~~~---~~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 151 ------------GWVLPLR----------CLGHEKVAQLEQKI---GSPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred ------------ceEcCcc----------CCChHHHHHHHHHh---CCChhheEEecCCcccHHHHHhCCCcEEE
Confidence 0011111 11445555565555 44667789999999999999999977663
No 119
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.90 E-value=1.8e-08 Score=84.51 Aligned_cols=140 Identities=16% Similarity=0.157 Sum_probs=88.9
Q ss_pred CCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCcccee-EeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360 96 ENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGI-ICFETLNPTHKNTVSDDEDDIAFVESAAS 171 (298)
Q Consensus 96 ~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (298)
..+...||++++.++++ ++++|+|+++...+.++++.+.-.+-++.+ +.+++...
T Consensus 70 k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~i--------------------- 128 (220)
T COG4359 70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYI--------------------- 128 (220)
T ss_pred hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceE---------------------
Confidence 34688899999999885 889999999999999999988633322221 11111111
Q ss_pred ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEE---E
Q 022360 172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTV---L 248 (298)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v---~ 248 (298)
++.+-- ++..++---++--|+..+.. +.-+++.++|+|||..|+.+|+..-+-++ +
T Consensus 129 -----------h~dg~h------~i~~~~ds~fG~dK~~vI~~----l~e~~e~~fy~GDsvsDlsaaklsDllFAK~~L 187 (220)
T COG4359 129 -----------HIDGQH------SIKYTDDSQFGHDKSSVIHE----LSEPNESIFYCGDSVSDLSAAKLSDLLFAKDDL 187 (220)
T ss_pred -----------cCCCce------eeecCCccccCCCcchhHHH----hhcCCceEEEecCCcccccHhhhhhhHhhHHHH
Confidence 000000 00000000012333344443 44577889999999999999998765444 1
Q ss_pred ecCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360 249 IGKSQRVKGADYAFESIHNIKEAIPELWE 277 (298)
Q Consensus 249 v~~~~~~~~ad~i~~s~~~l~~~l~~~~~ 277 (298)
++.-.++..+..-++++.|+..-+++++.
T Consensus 188 ~nyc~eqn~~f~~fe~F~eIlk~iekvl~ 216 (220)
T COG4359 188 LNYCREQNLNFLEFETFYEILKEIEKVLE 216 (220)
T ss_pred HHHHHHcCCCCcccccHHHHHHHHHHHHh
Confidence 23334578888889999999988888865
No 120
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.85 E-value=5.9e-09 Score=104.01 Aligned_cols=48 Identities=15% Similarity=0.039 Sum_probs=42.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEE--cCCccchHHHHHcCCeEEEecCC
Q 022360 205 CKPSELAIEKALKIASINPQRTLFF--EDSVRNIQAGKRVGLDTVLIGKS 252 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~i--GDs~~Di~~a~~aG~~~v~v~~~ 252 (298)
+-.|..+++.+++.++++.++++.| ||+.||+.|.+.+|.++++-+..
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~~ 660 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRPG 660 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCCC
Confidence 4677799999999999999999999 99999999999999999985443
No 121
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.85 E-value=1.3e-09 Score=91.92 Aligned_cols=99 Identities=19% Similarity=0.335 Sum_probs=68.7
Q ss_pred CCCCCChhHHHHHHhCC---CcEEEEeC-CChHHHHHHHHHhCCC----------CccceeEeecCCCCCCCCCCCCChh
Q 022360 96 ENLKPDPVLRSLLLSLP---LRKIIFTN-ADKVHAVKVLSRLGLE----------DCFEGIICFETLNPTHKNTVSDDED 161 (298)
Q Consensus 96 ~~~~~~~g~~~~L~~l~---~~~~ivS~-~~~~~~~~~l~~l~l~----------~~f~~i~~~~~~~~~~~~~~~~~~~ 161 (298)
..+.++|++.+.|..|+ .+++++|. ..+..++.+|+.+++. ++|+..-..
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~---------------- 105 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIY---------------- 105 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEES----------------
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhhee----------------
Confidence 45678888888888874 78999995 5567889999999998 666653321
Q ss_pred hHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHH
Q 022360 162 DIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKR 241 (298)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~ 241 (298)
.-+|...|+.+.++.|++++++++|.|..+++.....
T Consensus 106 -------------------------------------------~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~ 142 (169)
T PF12689_consen 106 -------------------------------------------PGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSK 142 (169)
T ss_dssp -------------------------------------------SS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHT
T ss_pred -------------------------------------------cCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEe
Confidence 3467799999999999999999999999999999999
Q ss_pred cCCeEEEecCCC
Q 022360 242 VGLDTVLIGKSQ 253 (298)
Q Consensus 242 aG~~~v~v~~~~ 253 (298)
.|+.++++..|-
T Consensus 143 lGV~~v~v~~Gl 154 (169)
T PF12689_consen 143 LGVTCVLVPDGL 154 (169)
T ss_dssp TT-EEEE-SSS-
T ss_pred cCcEEEEeCCCC
Confidence 999999987754
No 122
>PTZ00445 p36-lilke protein; Provisional
Probab=98.85 E-value=1.3e-08 Score=87.91 Aligned_cols=49 Identities=18% Similarity=0.329 Sum_probs=45.2
Q ss_pred CCCCHHH--H--HHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360 205 CKPSELA--I--EKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 205 ~kp~~~~--~--~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~ 253 (298)
.||.|.. | +++++++|++|++|++|+|+..++++|++.|+.++.+..+.
T Consensus 156 ~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~e 208 (219)
T PTZ00445 156 DAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGNE 208 (219)
T ss_pred cCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCChH
Confidence 6888888 8 99999999999999999999999999999999999886543
No 123
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.84 E-value=1.9e-08 Score=90.08 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=41.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 252 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~ 252 (298)
+.+|+.+++.+++++++++++|++|||+.||+.|++.+|..++.+..+
T Consensus 165 ~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 165 GSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred CCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 589999999999999999999999999999999999965554444433
No 124
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.83 E-value=2.9e-08 Score=88.60 Aligned_cols=87 Identities=16% Similarity=0.032 Sum_probs=67.2
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHH--HHHHHhCCCC-ccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAV--KVLSRLGLED-CFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 172 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~--~~l~~l~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (298)
.++||+.++|++| +++++++||+...... ..++++|+.. +|+.++++.+...
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~---------------------- 81 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAV---------------------- 81 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHH----------------------
Confidence 3456777777666 4789999998776655 7889999987 8999998764321
Q ss_pred cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCC
Q 022360 173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL 244 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~ 244 (298)
..+..+++++++.|.++++|||+..|++.....|.
T Consensus 82 -------------------------------------~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 82 -------------------------------------QMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred -------------------------------------HHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 45777778889999999999999999988765554
No 125
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.80 E-value=4.7e-08 Score=88.39 Aligned_cols=83 Identities=19% Similarity=0.182 Sum_probs=61.0
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHH---HHHHHHHhCCCCcc-ceeEeecCCCCCCCCCCCCChhhHHHHHhh
Q 022360 97 NLKPDPVLRSLLLSL---PLRKIIFTNADKVH---AVKVLSRLGLEDCF-EGIICFETLNPTHKNTVSDDEDDIAFVESA 169 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~---~~~~l~~l~l~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (298)
...+.||+.++|+.+ +.+++++|+..... ....++.+|+..++ +.++..++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~---------------------- 173 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD---------------------- 173 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC----------------------
Confidence 457899999999976 47899999977443 44677788886543 44444321
Q ss_pred hcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHH
Q 022360 170 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGK 240 (298)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~ 240 (298)
.++|+.....+.+.+++ +++|||+.+|+..+.
T Consensus 174 -----------------------------------~~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 174 -----------------------------------KSSKESRRQKVQKDYEI----VLLFGDNLLDFDDFF 205 (266)
T ss_pred -----------------------------------CCCcHHHHHHHHhcCCE----EEEECCCHHHhhhhh
Confidence 35667888888887777 999999999996543
No 126
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.80 E-value=1.3e-07 Score=79.38 Aligned_cols=102 Identities=18% Similarity=0.208 Sum_probs=80.2
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHh---CCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhh
Q 022360 97 NLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRL---GLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAA 170 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l---~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (298)
...++|++.+.|++- +.+++|+|++...-++-.+.+. +|..+|++.+-.. .|
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtt-iG--------------------- 158 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTT-IG--------------------- 158 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeecc-cc---------------------
Confidence 356799999999874 5889999999988666666554 3445555544221 11
Q ss_pred cccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEec
Q 022360 171 STTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG 250 (298)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~ 250 (298)
.|-....|.+++...|++|.+++++.|+.+.+.+|+.+|+.+.++.
T Consensus 159 ----------------------------------~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~ 204 (229)
T COG4229 159 ----------------------------------KKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAV 204 (229)
T ss_pred ----------------------------------ccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeee
Confidence 5777789999999999999999999999999999999999999986
Q ss_pred CCCC
Q 022360 251 KSQR 254 (298)
Q Consensus 251 ~~~~ 254 (298)
++..
T Consensus 205 R~g~ 208 (229)
T COG4229 205 RPGN 208 (229)
T ss_pred cCCC
Confidence 6543
No 127
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.79 E-value=6.8e-08 Score=82.24 Aligned_cols=95 Identities=20% Similarity=0.264 Sum_probs=60.8
Q ss_pred hhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCC
Q 022360 102 PVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANG 178 (298)
Q Consensus 102 ~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (298)
|++.++|+.+ +.+++|+|++....++++++.+++.... +++.+-... . +.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~~-~------------------------~~ 144 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFDN-G------------------------GG 144 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEECT-T------------------------CC
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeeec-c------------------------cc
Confidence 6666888665 6889999999999999999999987532 222221000 0 00
Q ss_pred CchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHH---HHHcCCCCCcEEEEcCCccchHHHH
Q 022360 179 PQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKA---LKIASINPQRTLFFEDSVRNIQAGK 240 (298)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~---l~~l~i~p~~~i~iGDs~~Di~~a~ 240 (298)
.....+.+ ...+ .|...++.+ ... +.++..+++||||.+|+.|++
T Consensus 145 ~~~~~~~~---------------~~~~-~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 145 IFTGRITG---------------SNCG-GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp EEEEEEEE---------------EEES-HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred eeeeeECC---------------CCCC-cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 00000000 0001 256777777 444 788899999999999999985
No 128
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=98.75 E-value=5.6e-09 Score=89.26 Aligned_cols=69 Identities=17% Similarity=0.358 Sum_probs=58.9
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCC--------CCCCCEEeCCHHHHHHHhH
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQR--------VKGADYAFESIHNIKEAIP 273 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~--------~~~ad~i~~s~~~l~~~l~ 273 (298)
+||++..|+.+++.+|++|++++||||.. .|+-.|++.||..+.+..|.- ...||...+++.+--++|-
T Consensus 180 GKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I~ 257 (262)
T KOG3040|consen 180 GKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLII 257 (262)
T ss_pred cCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHHH
Confidence 79999999999999999999999999999 689999999999999966542 4567778888777555543
No 129
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.73 E-value=1.4e-07 Score=85.55 Aligned_cols=70 Identities=13% Similarity=0.175 Sum_probs=59.7
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc----CCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV----GLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE 277 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a----G~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~ 277 (298)
+-.|..+++++++.+++..+++++|||+.||+.|++.+ |+.+++ + .....|.+.+++.+++..+|..+..
T Consensus 172 g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vav-g--~a~~~A~~~l~~~~~v~~~L~~l~~ 245 (266)
T PRK10187 172 GTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKV-G--TGATQASWRLAGVPDVWSWLEMITT 245 (266)
T ss_pred CCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEE-C--CCCCcCeEeCCCHHHHHHHHHHHHH
Confidence 36778999999999999999999999999999999998 655443 3 3356689999999999999988874
No 130
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.70 E-value=9.8e-09 Score=91.64 Aligned_cols=46 Identities=37% Similarity=0.444 Sum_probs=42.4
Q ss_pred CCCCHHHHHHHHHHcCCC-CCcEEEEcCCc-cchHHHHHcCCeEEEec
Q 022360 205 CKPSELAIEKALKIASIN-PQRTLFFEDSV-RNIQAGKRVGLDTVLIG 250 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~-p~~~i~iGDs~-~Di~~a~~aG~~~v~v~ 250 (298)
+||+|..++.++++++.. +++|+||||+. +||.+|+++|+.++++.
T Consensus 194 gKP~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 194 GKPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred CCCCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEe
Confidence 799999999999999975 67899999995 99999999999999874
No 131
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.68 E-value=1.5e-07 Score=79.29 Aligned_cols=45 Identities=24% Similarity=0.420 Sum_probs=37.3
Q ss_pred CCCHHHHHHHHHHcCC-----CCCcEEEEcCCc-cchHHHHHcCCeEEEecCC
Q 022360 206 KPSELAIEKALKIASI-----NPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKS 252 (298)
Q Consensus 206 kp~~~~~~~~l~~l~i-----~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~ 252 (298)
|| ..++.+++.++. .|+++++|||.. +|+.+|+..|+.++++..|
T Consensus 116 KP--~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 116 KP--GCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred CC--ccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 55 556666666654 499999999999 9999999999999998765
No 132
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.62 E-value=3.7e-08 Score=87.15 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=37.4
Q ss_pred CCCCHHHHHHHHHHcCC--CCCcEEEEcCCccchHHHHHcCCeEE
Q 022360 205 CKPSELAIEKALKIASI--NPQRTLFFEDSVRNIQAGKRVGLDTV 247 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i--~p~~~i~iGDs~~Di~~a~~aG~~~v 247 (298)
+-.|+.+++.+++.+++ ++.+|++|||+.||+.|.+.+|++++
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 36667889999998876 67789999999999999999999875
No 133
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.60 E-value=1e-07 Score=94.76 Aligned_cols=110 Identities=14% Similarity=0.224 Sum_probs=84.9
Q ss_pred CCCChhHHHHHHhCC---C-cEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360 98 LKPDPVLRSLLLSLP---L-RKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 173 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~---~-~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (298)
-.++||+.+.|+.|+ + +++++|+.....++..++++|++++|..+.
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~------------------------------ 410 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL------------------------------ 410 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC------------------------------
Confidence 467899999988884 7 899999999999999999999987764332
Q ss_pred CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-
Q 022360 174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS- 252 (298)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~- 252 (298)
+.+|.. ++++++..+++++||||+.||+.+++.+|+...+...+
T Consensus 411 -------------------------------p~~K~~----~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~ 455 (536)
T TIGR01512 411 -------------------------------PEDKLE----IVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGS 455 (536)
T ss_pred -------------------------------cHHHHH----HHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCcc
Confidence 233444 44444555689999999999999999999866654222
Q ss_pred -CCCCCCCEEe--CCHHHHHHHh
Q 022360 253 -QRVKGADYAF--ESIHNIKEAI 272 (298)
Q Consensus 253 -~~~~~ad~i~--~s~~~l~~~l 272 (298)
..+..+|.++ +++.+|.+.+
T Consensus 456 ~~~~~~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 456 DVAIETADVVLLNDDLSRLPQAI 478 (536)
T ss_pred HHHHHhCCEEEECCCHHHHHHHH
Confidence 2367899999 8899887654
No 134
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.55 E-value=1.7e-07 Score=93.50 Aligned_cols=110 Identities=13% Similarity=0.221 Sum_probs=83.2
Q ss_pred CCCChhHHHHHHhC---C-CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360 98 LKPDPVLRSLLLSL---P-LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 173 (298)
Q Consensus 98 ~~~~~g~~~~L~~l---~-~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (298)
..++||+.++|++| + ++++++|+.....++..++++|++++|..+.
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~------------------------------ 432 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL------------------------------ 432 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC------------------------------
Confidence 46789999999988 4 6889999999999999999999987775431
Q ss_pred CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360 174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~ 253 (298)
+++|+..++.+ +..+.+|+||||+.||+.+++++|+...+.....
T Consensus 433 -------------------------------p~~K~~~v~~l----~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~ 477 (556)
T TIGR01525 433 -------------------------------PEDKLAIVKEL----QEEGGVVAMVGDGINDAPALAAADVGIAMGAGSD 477 (556)
T ss_pred -------------------------------HHHHHHHHHHH----HHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCH
Confidence 23344444444 4466799999999999999999997666552111
Q ss_pred -CCCCCCEEeC--CHHHHHHHh
Q 022360 254 -RVKGADYAFE--SIHNIKEAI 272 (298)
Q Consensus 254 -~~~~ad~i~~--s~~~l~~~l 272 (298)
.+..+|+++. ++..|.+.+
T Consensus 478 ~~~~~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 478 VAIEAADIVLLNDDLSSLPTAI 499 (556)
T ss_pred HHHHhCCEEEeCCCHHHHHHHH
Confidence 3567999998 566666554
No 135
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.48 E-value=3.9e-07 Score=91.06 Aligned_cols=109 Identities=14% Similarity=0.227 Sum_probs=81.1
Q ss_pred CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360 98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 174 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (298)
..++|++.++|++|+ ++++++|+.....++..++++|++ +|. + ..
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~~-----~-~~------------------------- 451 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VRA-----E-VL------------------------- 451 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EEc-----c-CC-------------------------
Confidence 457899999888874 789999999999999999999995 221 1 00
Q ss_pred CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-C
Q 022360 175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-Q 253 (298)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~ 253 (298)
+++|.+.++++.+ ++++|+||||+.||+.+++.+|+...+.... .
T Consensus 452 ------------------------------p~~K~~~v~~l~~----~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~ 497 (562)
T TIGR01511 452 ------------------------------PDDKAALIKELQE----KGRVVAMVGDGINDAPALAQADVGIAIGAGTDV 497 (562)
T ss_pred ------------------------------hHHHHHHHHHHHH----cCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHH
Confidence 2445555555443 6789999999999999999999876655322 2
Q ss_pred CCCCCCEEeC--CHHHHHHHh
Q 022360 254 RVKGADYAFE--SIHNIKEAI 272 (298)
Q Consensus 254 ~~~~ad~i~~--s~~~l~~~l 272 (298)
.+..+|+++. ++.+|.+.+
T Consensus 498 a~~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 498 AIEAADVVLMRNDLNDVATAI 518 (562)
T ss_pred HHhhCCEEEeCCCHHHHHHHH
Confidence 3677999994 777776654
No 136
>PLN02423 phosphomannomutase
Probab=98.36 E-value=2.7e-06 Score=76.17 Aligned_cols=54 Identities=11% Similarity=0.030 Sum_probs=46.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcC----CccchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhh
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFED----SVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW 276 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGD----s~~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~ 276 (298)
+-.|..+++.++ +++++++||| +.||++|.+.-|+.++ .+.+.+|..+.|.+++
T Consensus 187 gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~-------------~~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 187 GWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGH-------------TVTSPDDTREQCTALF 244 (245)
T ss_pred CCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceE-------------EeCCHHHHHHHHHHhc
Confidence 477778888888 8999999999 6999999999898888 6778888888887764
No 137
>PTZ00174 phosphomannomutase; Provisional
Probab=98.35 E-value=5.2e-07 Score=80.82 Aligned_cols=42 Identities=7% Similarity=-0.078 Sum_probs=36.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcC----CccchHHHHHcCCeEEEec
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFED----SVRNIQAGKRVGLDTVLIG 250 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGD----s~~Di~~a~~aG~~~v~v~ 250 (298)
+-.|..+++.++++ ++++++||| +.||++|.+.++...+.++
T Consensus 186 gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 186 GWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred CCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 47788999999998 589999999 8999999998877666554
No 138
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.28 E-value=3.8e-07 Score=76.59 Aligned_cols=95 Identities=14% Similarity=0.093 Sum_probs=79.6
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCC-ccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360 98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLED-CFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 174 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (298)
+...||+.++|+.+. +.++|.|++...+++.++++++... +|+.++..++...
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~------------------------ 96 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVF------------------------ 96 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEE------------------------
Confidence 567899999999986 6799999999999999999999876 8888888765432
Q ss_pred CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360 175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 249 (298)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v 249 (298)
.+|+ +.+.++.+|.++++|++|||+..|+.++.++|+.+...
T Consensus 97 ------------------------------~~~~---~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f 138 (162)
T TIGR02251 97 ------------------------------TNGK---YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSW 138 (162)
T ss_pred ------------------------------eCCC---EEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCC
Confidence 2343 56778889999999999999999999999999876543
No 139
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.27 E-value=3.5e-06 Score=88.44 Aligned_cols=137 Identities=20% Similarity=0.236 Sum_probs=99.0
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 175 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (298)
++.|++.+.++.| ++++.++|+.....+..+.+.+|+...++.++++.++..+ ++ +.++.+..
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~------~~-~~l~~~~~------- 593 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAM------DD-QQLSQIVP------- 593 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhC------CH-HHHHHHhh-------
Confidence 5688999888877 4889999999999999999999998877777766554321 11 11111100
Q ss_pred CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC--
Q 022360 176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-- 253 (298)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-- 253 (298)
...+ .+...|+-...+++.++-..+.+.|+||+.||+.+.+.|+++.++...+.
T Consensus 594 --~~~V----------------------far~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~v 649 (884)
T TIGR01522 594 --KVAV----------------------FARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV 649 (884)
T ss_pred --cCeE----------------------EEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHH
Confidence 0011 15666777777778777777889999999999999999998877642222
Q ss_pred CCCCCCEEe--CCHHHHHHHhH
Q 022360 254 RVKGADYAF--ESIHNIKEAIP 273 (298)
Q Consensus 254 ~~~~ad~i~--~s~~~l~~~l~ 273 (298)
.+..+|+++ +++..+.++++
T Consensus 650 a~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 650 AKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred HHHhcCEEEcCCCHHHHHHHHH
Confidence 367899999 55888776554
No 140
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.24 E-value=1.7e-06 Score=72.43 Aligned_cols=43 Identities=19% Similarity=0.142 Sum_probs=34.6
Q ss_pred CCCCHHHHHHHHHHcCC----CCCcEEEEcCC-----------ccchHHHHHcCCeEE
Q 022360 205 CKPSELAIEKALKIASI----NPQRTLFFEDS-----------VRNIQAGKRVGLDTV 247 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i----~p~~~i~iGDs-----------~~Di~~a~~aG~~~v 247 (298)
+||++-++..+++.++. +.++++||||. ..|.+-|.++|+...
T Consensus 96 RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 96 RKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp STTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred CCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 89999999999999874 89999999996 578999999999754
No 141
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.22 E-value=1.9e-06 Score=78.47 Aligned_cols=43 Identities=21% Similarity=0.157 Sum_probs=36.4
Q ss_pred CCCHHHHHHHHHHcCCC--CCcEEEEcCCccchHHHHHcCCeEEE
Q 022360 206 KPSELAIEKALKIASIN--PQRTLFFEDSVRNIQAGKRVGLDTVL 248 (298)
Q Consensus 206 kp~~~~~~~~l~~l~i~--p~~~i~iGDs~~Di~~a~~aG~~~v~ 248 (298)
-+|..+.+.+.+.+.-. +-.++.+|||.||+.|.+.+-+.++.
T Consensus 207 ~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 207 LPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 46778888888877754 55899999999999999999988775
No 142
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.21 E-value=4.2e-06 Score=76.07 Aligned_cols=49 Identities=20% Similarity=0.305 Sum_probs=41.8
Q ss_pred hhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCC
Q 022360 102 PVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNP 150 (298)
Q Consensus 102 ~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~ 150 (298)
||+.++|+.| +.+++|+|++....+...++++|+..+|+.++++++...
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~ 200 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE 200 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence 6666666666 577899999999999999999999999999999887754
No 143
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=98.20 E-value=4.9e-06 Score=74.36 Aligned_cols=71 Identities=15% Similarity=0.167 Sum_probs=63.0
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHc-------CCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhh
Q 022360 206 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRV-------GLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW 276 (298)
Q Consensus 206 kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~a-------G~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~ 276 (298)
-.|..+++.+++++++++.++++|||+.||+.|++.+ |..++.+..+..+..|++++++..++.++|..+.
T Consensus 166 ~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 166 VNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred CCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCCCHHHHHHHHHHHh
Confidence 5567999999999999999999999999999999999 6667777667778889999999999999998765
No 144
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.19 E-value=4.2e-06 Score=75.06 Aligned_cols=47 Identities=19% Similarity=0.236 Sum_probs=37.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 252 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~ 252 (298)
+-.|..+++++++++++++++++++|||.||+.|. ..+...+.|+..
T Consensus 163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na 209 (247)
T PF05116_consen 163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNA 209 (247)
T ss_dssp T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCC
Confidence 57788999999999999999999999999999999 666677766554
No 145
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.18 E-value=1.3e-05 Score=63.95 Aligned_cols=116 Identities=14% Similarity=0.141 Sum_probs=90.6
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccC
Q 022360 97 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTT 174 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (298)
.-++++.+.+.+..|. .+++|.|+.....+...++..|+. .+.++.
T Consensus 28 gGklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~~gi~--~~rv~a------------------------------ 75 (152)
T COG4087 28 GGKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEFVGIP--VERVFA------------------------------ 75 (152)
T ss_pred CcEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHHcCCc--eeeeec------------------------------
Confidence 4466777777777765 789999999999999999988865 223332
Q ss_pred CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCC
Q 022360 175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQR 254 (298)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~ 254 (298)
-.++..-..+++.++-..+.|+||||+.||+.+.+++-++.+-+.....
T Consensus 76 -------------------------------~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v 124 (152)
T COG4087 76 -------------------------------GADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGV 124 (152)
T ss_pred -------------------------------ccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCc
Confidence 3345778888888888888999999999999999999888777754332
Q ss_pred ----CCCCCEEeCCHHHHHHHhHHh
Q 022360 255 ----VKGADYAFESIHNIKEAIPEL 275 (298)
Q Consensus 255 ----~~~ad~i~~s~~~l~~~l~~~ 275 (298)
...||+++.++.++.+++...
T Consensus 125 ~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 125 PERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred chHHHhhchhhhhhHHHHHHHhhcc
Confidence 477999999999988877543
No 146
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.15 E-value=4e-06 Score=66.85 Aligned_cols=48 Identities=21% Similarity=0.135 Sum_probs=39.0
Q ss_pred CCCCChhHHHHHHhCCCcEEEEeC---CChHHHHHHHHHhCCCCccceeEe
Q 022360 97 NLKPDPVLRSLLLSLPLRKIIFTN---ADKVHAVKVLSRLGLEDCFEGIIC 144 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l~~~~~ivS~---~~~~~~~~~l~~l~l~~~f~~i~~ 144 (298)
.+.++|.+.++|.+++-.++|+|. .....+-..++.++++.||+.++.
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~Vi 89 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVI 89 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEe
Confidence 367899999999999866655544 667777788999999999998874
No 147
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.12 E-value=9.3e-06 Score=84.83 Aligned_cols=110 Identities=15% Similarity=0.236 Sum_probs=82.0
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 175 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (298)
.++|++.+.|+.| +++++++|+......+.+.+++|+.++|..+.
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~~-------------------------------- 697 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVL-------------------------------- 697 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCCC--------------------------------
Confidence 5678899888877 47899999999999999999999976553221
Q ss_pred CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-C
Q 022360 176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-R 254 (298)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~ 254 (298)
+.+ ...++++++..+++++||||+.||+.+++.+|++.++.+... .
T Consensus 698 -----------------------------p~~----K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a 744 (834)
T PRK10671 698 -----------------------------PDG----KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVA 744 (834)
T ss_pred -----------------------------HHH----HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHH
Confidence 122 334556666678899999999999999999999777664322 3
Q ss_pred CCCCCEEe--CCHHHHHHHhH
Q 022360 255 VKGADYAF--ESIHNIKEAIP 273 (298)
Q Consensus 255 ~~~ad~i~--~s~~~l~~~l~ 273 (298)
+..+|.++ +++++|.++++
T Consensus 745 ~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 745 IETAAITLMRHSLMGVADALA 765 (834)
T ss_pred HHhCCEEEecCCHHHHHHHHH
Confidence 55566554 66777776664
No 148
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.08 E-value=2.5e-05 Score=67.20 Aligned_cols=46 Identities=13% Similarity=0.237 Sum_probs=35.2
Q ss_pred EEEcCCccchHHHHHcCCeEEEecCCCCCCC-CCEEeCCHHHHHHHh
Q 022360 227 LFFEDSVRNIQAGKRVGLDTVLIGKSQRVKG-ADYAFESIHNIKEAI 272 (298)
Q Consensus 227 i~iGDs~~Di~~a~~aG~~~v~v~~~~~~~~-ad~i~~s~~~l~~~l 272 (298)
++|.|+...+..+...|+.+++...+..+.. .-..+.|.+|+.+.|
T Consensus 139 vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~~~~Rv~~W~ei~~~i 185 (191)
T PF06941_consen 139 VLIDDRPHNLEQFANAGIPVILFDQPYNRDESNFPRVNNWEEIEDLI 185 (191)
T ss_dssp EEEESSSHHHSS-SSESSEEEEE--GGGTT--TSEEE-STTSHHHHH
T ss_pred EEecCChHHHHhccCCCceEEEEcCCCCCCCCCCccCCCHHHHHHHH
Confidence 7999999999999999999999977765443 477889999988776
No 149
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=98.06 E-value=2.5e-05 Score=75.59 Aligned_cols=129 Identities=20% Similarity=0.196 Sum_probs=69.5
Q ss_pred CCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHh---------CCCCccceeEeecCCCCCCCCCCCCChhhHHH
Q 022360 98 LKPDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRL---------GLEDCFEGIICFETLNPTHKNTVSDDEDDIAF 165 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l---------~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (298)
+...|.+..+|++++ .++.++||+.-.++...++.+ .+.++||.|++...-.. |
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~--------------F 247 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPG--------------F 247 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCH--------------H
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCc--------------c
Confidence 445688888888774 679999999999999999876 35679999987643211 0
Q ss_pred HHhhhcccCCCCCCchhhhcc-cc-CCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHc
Q 022360 166 VESAASTTTSANGPQIFDIIG-HF-AQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRV 242 (298)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~a 242 (298)
.. . ...+..+.. +. +......-.+.+|....- -....+.+.+|+...+++||||+. .||...+..
T Consensus 248 F~------~---~~pfr~vd~~~g~l~~~~~~~~l~~g~vY~g---Gn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~ 315 (448)
T PF05761_consen 248 FT------E---GRPFREVDTETGKLKWGKYVGPLEKGKVYSG---GNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKR 315 (448)
T ss_dssp HC------T------EEEEETTTSSEECS---SS--TC-EEEE-----HHHHHHHCT--GGGEEEEESSTTTTHHHHHHH
T ss_pred cC------C---CCceEEEECCCCccccccccccccCCCEeec---CCHHHHHHHHccCCCeEEEECCchhhhhhhhccc
Confidence 00 0 001111110 00 000000000111111111 345666777899999999999999 999888777
Q ss_pred -CCeEEEecCC
Q 022360 243 -GLDTVLIGKS 252 (298)
Q Consensus 243 -G~~~v~v~~~ 252 (298)
||.+++|-..
T Consensus 316 ~gWrT~~Ii~E 326 (448)
T PF05761_consen 316 HGWRTAAIIPE 326 (448)
T ss_dssp H-SEEEEE-TT
T ss_pred cceEEEEEehh
Confidence 9999988554
No 150
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=98.03 E-value=0.00014 Score=71.48 Aligned_cols=102 Identities=12% Similarity=0.062 Sum_probs=60.4
Q ss_pred CChhHHHHHHhCCCcEEEEeCCChHHHHHHHHH-hCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCC
Q 022360 100 PDPVLRSLLLSLPLRKIIFTNADKVHAVKVLSR-LGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANG 178 (298)
Q Consensus 100 ~~~g~~~~L~~l~~~~~ivS~~~~~~~~~~l~~-l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (298)
..|...+.++..+. .+|+|.+...+++..++. +|++..+..-+.....|.+
T Consensus 111 l~~~a~~~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~--------------------------- 162 (497)
T PLN02177 111 VHPETWRVFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRA--------------------------- 162 (497)
T ss_pred cCHHHHHHHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEE---------------------------
Confidence 55667777777664 499999999999999975 7876432111111112221
Q ss_pred CchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEE
Q 022360 179 PQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL 248 (298)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~ 248 (298)
+|.+.++|.- .+..|...++ +.++.+... ++.|||.+|..+...++-..+.
T Consensus 163 ------TG~i~g~~~c---------~Ge~Kv~rl~---~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V 213 (497)
T PLN02177 163 ------TGFMKKPGVL---------VGDHKRDAVL---KEFGDALPD-LGLGDRETDHDFMSICKEGYMV 213 (497)
T ss_pred ------eeeecCCCCC---------ccHHHHHHHH---HHhCCCCce-EEEECCccHHHHHHhCCccEEe
Confidence 1111111110 0233334443 555644334 8999999999999999966553
No 151
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.96 E-value=4.9e-05 Score=69.32 Aligned_cols=48 Identities=25% Similarity=0.353 Sum_probs=39.6
Q ss_pred hhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCC
Q 022360 102 PVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLN 149 (298)
Q Consensus 102 ~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~ 149 (298)
|++.++|++| +.+++|+|++....+...++.+++..+|+.++++++..
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~ 201 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKA 201 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcc
Confidence 5555555555 57899999999999999999999999999999887654
No 152
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.83 E-value=6.7e-05 Score=79.22 Aligned_cols=136 Identities=13% Similarity=0.128 Sum_probs=89.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCc----cceeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDC----FEGIICFETLNPTHKNTVSDDEDDIAFVESAAS 171 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~----f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (298)
++.|++.+.++.+ ++++.++|+.....+....+.+|+..- ....+++.++..+ ++++..+.
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~------~~~~~~~~------ 604 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEM------GPAKQRAA------ 604 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhC------CHHHHHHh------
Confidence 4678888888776 488999999999999999999998531 1112222221110 00000000
Q ss_pred ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360 172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK 251 (298)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~ 251 (298)
..+.. + .++-.|+--..+++.++-..+.+.|+||+.||+.|.+.|+++.++...
T Consensus 605 ---~~~~~-v----------------------~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g 658 (917)
T TIGR01116 605 ---CRSAV-L----------------------FSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSG 658 (917)
T ss_pred ---hhcCe-E----------------------EEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCC
Confidence 00000 1 145556666777777776777888999999999999999998877522
Q ss_pred -CCCCCCCCEEeCC--HHHHHHHh
Q 022360 252 -SQRVKGADYAFES--IHNIKEAI 272 (298)
Q Consensus 252 -~~~~~~ad~i~~s--~~~l~~~l 272 (298)
...+..+|+++.+ +..+.+++
T Consensus 659 ~~~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 659 TEVAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred cHHHHHhcCeEEccCCHHHHHHHH
Confidence 2346789999987 77776655
No 153
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.73 E-value=0.00013 Score=75.41 Aligned_cols=107 Identities=14% Similarity=0.193 Sum_probs=76.4
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 175 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (298)
+++|++.+.++.| +++++++|+.....++.+.+.+|+..++ +.
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~------~~---------------------------- 613 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRA------GL---------------------------- 613 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeec------CC----------------------------
Confidence 6688999888877 4889999999999999999999996221 10
Q ss_pred CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-C
Q 022360 176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-R 254 (298)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~ 254 (298)
. +..|+..++. ++ .+..++||||+.||..+++.++++.++..... .
T Consensus 614 ----------------------~------p~~K~~~v~~----l~-~~~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a 660 (741)
T PRK11033 614 ----------------------L------PEDKVKAVTE----LN-QHAPLAMVGDGINDAPAMKAASIGIAMGSGTDVA 660 (741)
T ss_pred ----------------------C------HHHHHHHHHH----Hh-cCCCEEEEECCHHhHHHHHhCCeeEEecCCCHHH
Confidence 0 1223344444 33 23579999999999999999998888763322 3
Q ss_pred CCCCCEEe--CCHHHHHHHh
Q 022360 255 VKGADYAF--ESIHNIKEAI 272 (298)
Q Consensus 255 ~~~ad~i~--~s~~~l~~~l 272 (298)
+..+|.++ +++..|.+.+
T Consensus 661 ~~~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 661 LETADAALTHNRLRGLAQMI 680 (741)
T ss_pred HHhCCEEEecCCHHHHHHHH
Confidence 56677766 4566665444
No 154
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.70 E-value=0.00041 Score=61.35 Aligned_cols=48 Identities=10% Similarity=0.097 Sum_probs=34.4
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHH---HHHHHHHhCCCCccceeEe
Q 022360 96 ENLKPDPVLRSLLLSL---PLRKIIFTNADKVH---AVKVLSRLGLEDCFEGIIC 144 (298)
Q Consensus 96 ~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~---~~~~l~~l~l~~~f~~i~~ 144 (298)
...++.|++.++++.+ +.+++++|+.+... ...-|...|+..+ +.++-
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiL 170 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLIL 170 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-Ceeee
Confidence 3457889999998876 47899999988766 5566666777654 44443
No 155
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.70 E-value=0.0013 Score=57.48 Aligned_cols=150 Identities=14% Similarity=0.159 Sum_probs=82.2
Q ss_pred CCCCChhHHHHHHhCCC--cEEEEeCCChHHHHHHHHHhCCCC--ccceeEeecCCCCCCCCC--------CCCChhhHH
Q 022360 97 NLKPDPVLRSLLLSLPL--RKIIFTNADKVHAVKVLSRLGLED--CFEGIICFETLNPTHKNT--------VSDDEDDIA 164 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l~~--~~~ivS~~~~~~~~~~l~~l~l~~--~f~~i~~~~~~~~~~~~~--------~~~~~~~~~ 164 (298)
...+.||+.+.|+.++. .-+|+|.+-.++++....++|+.. ...-.+.-++...+.+.+ +++.-+.-+
T Consensus 81 sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~gee 160 (315)
T COG4030 81 SAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEE 160 (315)
T ss_pred hcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHH
Confidence 36788999999999985 467899999999999999998731 111112222232221111 011100001
Q ss_pred HHHhh--hcccCC-CCCCchhh---hccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHH
Q 022360 165 FVESA--ASTTTS-ANGPQIFD---IIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQA 238 (298)
Q Consensus 165 ~~~~~--~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~ 238 (298)
.++++ ...... .+.-+|++ ..| +--|..+.+-+++.-+++ ..++++|||.+|++|
T Consensus 161 lfe~lDe~F~rLip~E~gki~~~vk~VG------------------gg~ka~i~e~~~ele~~d-~sa~~VGDSItDv~m 221 (315)
T COG4030 161 LFEKLDELFSRLIPSEVGKIVESVKAVG------------------GGEKAKIMEGYCELEGID-FSAVVVGDSITDVKM 221 (315)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHhhhhcc------------------CcchhHHHHHHHhhcCCC-cceeEecCcccchHH
Confidence 11110 000000 11112222 111 334456666666655544 459999999999999
Q ss_pred HHHc-C---CeEEEecCCCCCCCCCEEeCCH
Q 022360 239 GKRV-G---LDTVLIGKSQRVKGADYAFESI 265 (298)
Q Consensus 239 a~~a-G---~~~v~v~~~~~~~~ad~i~~s~ 265 (298)
.+.+ | +.+++-++.+....||..+-+.
T Consensus 222 l~~~rgrGglAvaFNGNeYal~eAdVAvisp 252 (315)
T COG4030 222 LEAARGRGGLAVAFNGNEYALKEADVAVISP 252 (315)
T ss_pred HHHhhccCceEEEecCCcccccccceEEecc
Confidence 9887 2 3334345556677777765553
No 156
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.63 E-value=4.6e-05 Score=65.77 Aligned_cols=44 Identities=20% Similarity=0.131 Sum_probs=41.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEE
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL 248 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~ 248 (298)
+.+|+.+++.++++++++++++++|||+.||+.|++.+|+.++|
T Consensus 161 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 161 GVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 58899999999999999999999999999999999999998774
No 157
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.62 E-value=0.00021 Score=72.56 Aligned_cols=109 Identities=8% Similarity=0.063 Sum_probs=82.0
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 175 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (298)
++.|++.+.+++| +++++++|+.....+..+.+.+|++++|..
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~---------------------------------- 486 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAE---------------------------------- 486 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcC----------------------------------
Confidence 5678888888776 488999999999999999999999764422
Q ss_pred CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CC
Q 022360 176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QR 254 (298)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~ 254 (298)
-.|+--..+.+.++-...-+.|+||+.||..+.+.+.++.+|.... -+
T Consensus 487 -------------------------------~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvA 535 (673)
T PRK14010 487 -------------------------------CKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSA 535 (673)
T ss_pred -------------------------------CCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCCCCHHH
Confidence 1234455555555555567999999999999999999999887332 25
Q ss_pred CCCCCEEeCC--HHHHHHHh
Q 022360 255 VKGADYAFES--IHNIKEAI 272 (298)
Q Consensus 255 ~~~ad~i~~s--~~~l~~~l 272 (298)
+..+|.+..+ +..|.+.+
T Consensus 536 keAADiVLldd~ls~Iv~av 555 (673)
T PRK14010 536 KEAANLIDLDSNPTKLMEVV 555 (673)
T ss_pred HHhCCEEEcCCCHHHHHHHH
Confidence 8889998854 55555444
No 158
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.58 E-value=0.0001 Score=65.42 Aligned_cols=39 Identities=15% Similarity=0.118 Sum_probs=27.4
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChH---HHHHHHHHhCCCC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKV---HAVKVLSRLGLED 137 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~---~~~~~l~~l~l~~ 137 (298)
++.|++.++++.+ +..++++|+.... ....-|+..|...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~ 159 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPG 159 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTST
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCc
Confidence 6678888887775 5889999996554 3445566677654
No 159
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.56 E-value=0.0002 Score=72.73 Aligned_cols=109 Identities=11% Similarity=0.140 Sum_probs=78.7
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 175 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (298)
++.|++.+.++.| +++++++|+.....+..+.+.+|+++++....
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~~~-------------------------------- 493 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAEAT-------------------------------- 493 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcCCC--------------------------------
Confidence 5678888888777 48899999999999999999999975442110
Q ss_pred CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-C
Q 022360 176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-R 254 (298)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~ 254 (298)
+..|...++.+.+ ....+.|+||+.||..+.+.++++.++..... .
T Consensus 494 -----------------------------PedK~~~v~~lq~----~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~a 540 (675)
T TIGR01497 494 -----------------------------PEDKIALIRQEQA----EGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAA 540 (675)
T ss_pred -----------------------------HHHHHHHHHHHHH----cCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHH
Confidence 1223344554433 34469999999999999999999998874332 4
Q ss_pred CCCCCEEeCC--HHHHHHHh
Q 022360 255 VKGADYAFES--IHNIKEAI 272 (298)
Q Consensus 255 ~~~ad~i~~s--~~~l~~~l 272 (298)
+..+|.+.-+ +..|.+.+
T Consensus 541 keaadivLldd~~s~Iv~av 560 (675)
T TIGR01497 541 KEAANMVDLDSDPTKLIEVV 560 (675)
T ss_pred HHhCCEEECCCCHHHHHHHH
Confidence 7788888754 44444433
No 160
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=97.51 E-value=0.00055 Score=60.33 Aligned_cols=58 Identities=17% Similarity=0.252 Sum_probs=39.0
Q ss_pred cCCCChhhHHHHhhcccCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHH-H---HHHHHHhCCCCc
Q 022360 77 GYDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSLP---LRKIIFTNADKVH-A---VKVLSRLGLEDC 138 (298)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~-~---~~~l~~l~l~~~ 138 (298)
+..++++.|...+.. ....+.||+.++|.... ..++-+|+.+... . ..-+.+.|+...
T Consensus 104 nk~f~pe~Wd~wV~a----~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~ 168 (274)
T COG2503 104 NKGFTPETWDKWVQA----KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQV 168 (274)
T ss_pred CCCCCccchHHHHhh----cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccc
Confidence 344445666666655 34688999999999874 6788999976664 2 345555676543
No 161
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.49 E-value=0.00048 Score=72.35 Aligned_cols=134 Identities=10% Similarity=0.213 Sum_probs=87.9
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 175 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (298)
++.|++.+.++.| +++++++|+.....+..+.+.+|+.. +.++++.++.. .++++..+.+....
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~------~~~~el~~~~~~~~----- 581 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEE------LSDEELARELRKYH----- 581 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhh------CCHHHHHHHhhhCe-----
Confidence 4567888877776 58899999999999999999999953 23555444322 11122222211111
Q ss_pred CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCC
Q 022360 176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQR 254 (298)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~ 254 (298)
+ | ..-.|+--..+.+.+.-....+.|+||+.||..+.+.|.++.++... .-+
T Consensus 582 -----v------f----------------Ar~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvA 634 (867)
T TIGR01524 582 -----I------F----------------ARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIA 634 (867)
T ss_pred -----E------E----------------EECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHH
Confidence 0 0 23344555556665555566799999999999999999999988733 235
Q ss_pred CCCCCEEeCC--HHHHHHHh
Q 022360 255 VKGADYAFES--IHNIKEAI 272 (298)
Q Consensus 255 ~~~ad~i~~s--~~~l~~~l 272 (298)
+..+|.++.+ +..+.+.+
T Consensus 635 k~aADiVLldd~~~~I~~ai 654 (867)
T TIGR01524 635 KEASDIILLEKSLMVLEEGV 654 (867)
T ss_pred HHhCCEEEecCChHHHHHHH
Confidence 8889998854 54444433
No 162
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.48 E-value=0.00046 Score=70.25 Aligned_cols=109 Identities=9% Similarity=0.158 Sum_probs=81.1
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 175 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (298)
++.|++.+.++.| +++++++|+.....++.+.+.+|++++|.
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A----------------------------------- 489 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLA----------------------------------- 489 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEc-----------------------------------
Confidence 4578888887776 58899999999999999999999975432
Q ss_pred CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-C
Q 022360 176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ-R 254 (298)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~-~ 254 (298)
.-.|+--..+.++++-...-+.|+||+.||..+.+.+.++.+|..... +
T Consensus 490 ------------------------------~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvA 539 (679)
T PRK01122 490 ------------------------------EATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAA 539 (679)
T ss_pred ------------------------------cCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHH
Confidence 112344444555555455669999999999999999999999884323 4
Q ss_pred CCCCCEEeCC--HHHHHHHh
Q 022360 255 VKGADYAFES--IHNIKEAI 272 (298)
Q Consensus 255 ~~~ad~i~~s--~~~l~~~l 272 (298)
+..+|.+..+ +..|.+.+
T Consensus 540 keAADiVLldd~~s~Iv~av 559 (679)
T PRK01122 540 KEAGNMVDLDSNPTKLIEVV 559 (679)
T ss_pred HHhCCEEEeCCCHHHHHHHH
Confidence 8889998864 55555544
No 163
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.47 E-value=0.00036 Score=73.49 Aligned_cols=134 Identities=15% Similarity=0.229 Sum_probs=90.6
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 175 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (298)
++.|++.+.++.| ++++.++|+.....+..+.+.+|+.. +.++++.++..+ ++++..+.++...
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l------~~~el~~~~~~~~----- 616 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETL------SDDELANLAERTT----- 616 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhC------CHHHHHHHHhhCc-----
Confidence 4567777777766 58899999999999999999999952 345665554321 2222222221111
Q ss_pred CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CC
Q 022360 176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QR 254 (298)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~ 254 (298)
+ ...-.|+--..+.+.+.-...-+.|+||+.||..+.+.|.++.++.... -+
T Consensus 617 -----V----------------------fAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvA 669 (902)
T PRK10517 617 -----L----------------------FARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIA 669 (902)
T ss_pred -----E----------------------EEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHH
Confidence 1 0344456666666666656677999999999999999999999887332 35
Q ss_pred CCCCCEEeCC--HHHHHHHh
Q 022360 255 VKGADYAFES--IHNIKEAI 272 (298)
Q Consensus 255 ~~~ad~i~~s--~~~l~~~l 272 (298)
+..+|.++.+ +..+.+.+
T Consensus 670 keaADiVLldd~~~~I~~ai 689 (902)
T PRK10517 670 REAADIILLEKSLMVLEEGV 689 (902)
T ss_pred HHhCCEEEecCChHHHHHHH
Confidence 8899998854 55544433
No 164
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.46 E-value=0.0043 Score=55.87 Aligned_cols=50 Identities=14% Similarity=0.284 Sum_probs=41.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHH----HcCCeEEEecCCCC
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGK----RVGLDTVLIGKSQR 254 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~----~aG~~~v~v~~~~~ 254 (298)
+-+|..++..++.+.|..|+.+|||+|+..++.... ..|+...+.-+...
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence 677889999999999999999999999997776544 35888888765544
No 165
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.45 E-value=0.00036 Score=71.28 Aligned_cols=109 Identities=12% Similarity=0.239 Sum_probs=81.2
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 175 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (298)
.+.|+..+.++.| +++++++|+.....++.+.+.+|+++++..+.
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Aell-------------------------------- 584 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELL-------------------------------- 584 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCC--------------------------------
Confidence 4567777776665 58899999999999999999999987765443
Q ss_pred CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEec-CCCC
Q 022360 176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG-KSQR 254 (298)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~-~~~~ 254 (298)
+..|.+.++++. -....++||||+.||..+...+-++.+|.. ..-.
T Consensus 585 -----------------------------PedK~~~V~~l~----~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA 631 (713)
T COG2217 585 -----------------------------PEDKAEIVRELQ----AEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVA 631 (713)
T ss_pred -----------------------------cHHHHHHHHHHH----hcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHH
Confidence 233334444444 344679999999999999999999988876 3346
Q ss_pred CCCCCEEeCC--HHHHHHHh
Q 022360 255 VKGADYAFES--IHNIKEAI 272 (298)
Q Consensus 255 ~~~ad~i~~s--~~~l~~~l 272 (298)
.+.+|.++-+ ++.+.+.+
T Consensus 632 ~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 632 IEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred HHhCCEEEecCCHHHHHHHH
Confidence 8888987765 66665544
No 166
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=97.37 E-value=0.00079 Score=51.94 Aligned_cols=47 Identities=26% Similarity=0.205 Sum_probs=28.1
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChH---HHHHHHHHhCCCCccceeEeec
Q 022360 100 PDPVLRSLLLSL---PLRKIIFTNADKV---HAVKVLSRLGLEDCFEGIICFE 146 (298)
Q Consensus 100 ~~~g~~~~L~~l---~~~~~ivS~~~~~---~~~~~l~~l~l~~~f~~i~~~~ 146 (298)
+.||+.++|+.| +.+++++||.... .....++.+|+.---+.++++.
T Consensus 15 ~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~ 67 (101)
T PF13344_consen 15 PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG 67 (101)
T ss_dssp E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH
T ss_pred cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH
Confidence 345555555554 5889999997533 3445557788865556677653
No 167
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=97.33 E-value=3.8e-05 Score=63.82 Aligned_cols=51 Identities=25% Similarity=0.279 Sum_probs=40.9
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCC-CCccceeEeecCC
Q 022360 98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGL-EDCFEGIICFETL 148 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l-~~~f~~i~~~~~~ 148 (298)
+...||+.++|+.+. +.++|.|.+...+++.+++.+.- ..+|+.++..+..
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~ 88 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDC 88 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGS
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhccccccccccccc
Confidence 456899999999885 78999999999999999999987 5688888876644
No 168
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=97.27 E-value=0.00082 Score=71.29 Aligned_cols=136 Identities=10% Similarity=-0.000 Sum_probs=89.7
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 175 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (298)
++.|++.+.++.| +++++++|+.....+..+.+.+|+.+--..++++.++... ++++..+.+...
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l------~~~el~~~i~~~------ 646 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRL------VYEEMDPILPKL------ 646 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhC------CHHHHHHHhccC------
Confidence 4567887777766 5889999999999999999999986432345555443220 111111111000
Q ss_pred CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC--C
Q 022360 176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS--Q 253 (298)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~--~ 253 (298)
.+ .+.-.|+--..+.+.+.-...-+.|+||+.||..+.+.|-++.++...+ -
T Consensus 647 ----~V----------------------far~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv 700 (941)
T TIGR01517 647 ----RV----------------------LARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV 700 (941)
T ss_pred ----eE----------------------EEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHH
Confidence 01 0334445555566655555567999999999999999999998876232 3
Q ss_pred CCCCCCEEeC--CHHHHHHHh
Q 022360 254 RVKGADYAFE--SIHNIKEAI 272 (298)
Q Consensus 254 ~~~~ad~i~~--s~~~l~~~l 272 (298)
++..||+++. ++..|.+.+
T Consensus 701 Ak~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 701 AKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred HHHhCCEEEecCCHHHHHHHH
Confidence 5888999988 576666555
No 169
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=97.27 E-value=0.00073 Score=71.26 Aligned_cols=134 Identities=17% Similarity=0.204 Sum_probs=90.5
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 175 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (298)
++.|++.+.++.| +++++++|+.....+..+.+.+|+.. +.++++.++.. .++++..+.+....
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~------~~~~el~~~v~~~~----- 616 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEA------MDDAALAREVEERT----- 616 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhh------CCHHHHHHHhhhCC-----
Confidence 4567888887776 58899999999999999999999952 34555544432 12222222211111
Q ss_pred CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCC
Q 022360 176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQR 254 (298)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~ 254 (298)
+ ...-.|+--.++.+.+.-...-+.|+||+.||..+.+.|.++.++... .-+
T Consensus 617 -----V----------------------fAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvA 669 (903)
T PRK15122 617 -----V----------------------FAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIA 669 (903)
T ss_pred -----E----------------------EEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHHH
Confidence 1 134455666677776666667799999999999999999999888732 235
Q ss_pred CCCCCEEeC--CHHHHHHHh
Q 022360 255 VKGADYAFE--SIHNIKEAI 272 (298)
Q Consensus 255 ~~~ad~i~~--s~~~l~~~l 272 (298)
+..||.++. ++..+.+.+
T Consensus 670 keaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 670 KESADIILLEKSLMVLEEGV 689 (903)
T ss_pred HHhcCEEEecCChHHHHHHH
Confidence 899999984 455554433
No 170
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.25 E-value=0.0045 Score=51.65 Aligned_cols=39 Identities=8% Similarity=0.086 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHcCCCCCc-EEEEcCCccchHHHHHcCCeE
Q 022360 208 SELAIEKALKIASINPQR-TLFFEDSVRNIQAGKRVGLDT 246 (298)
Q Consensus 208 ~~~~~~~~l~~l~i~p~~-~i~iGDs~~Di~~a~~aG~~~ 246 (298)
|.+.+..+.+.+.-..-. ++.|||+.+|+.+-+++|+..
T Consensus 103 K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 103 KIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 456777777655422223 446898899999999999884
No 171
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.20 E-value=0.0013 Score=70.36 Aligned_cols=136 Identities=10% Similarity=0.038 Sum_probs=87.8
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCc--c--------ceeEeecCCCCCCCCCCCCChhhHHH
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDC--F--------EGIICFETLNPTHKNTVSDDEDDIAF 165 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~--f--------~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (298)
++.|++.+.++.+ +++++++|+.....+..+.+.+|+..- . ..++++.++.. .++++..+.
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~------l~~~~l~~~ 719 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA------LSDEEVDDL 719 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhh------cCHHHHHHH
Confidence 5567777777766 589999999999999999999998531 1 12333333221 011111111
Q ss_pred HHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCe
Q 022360 166 VESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLD 245 (298)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~ 245 (298)
+. . ..++ +.-.|+--..+.+.+.-...-+.|+||+.||..|.+.|.++
T Consensus 720 ~~---------~-~~V~----------------------ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVG 767 (1053)
T TIGR01523 720 KA---------L-CLVI----------------------ARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVG 767 (1053)
T ss_pred hh---------c-CeEE----------------------EecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCcc
Confidence 00 0 0011 34455556666666655566799999999999999999999
Q ss_pred EEEecCC--CCCCCCCEEeCC--HHHHHHHh
Q 022360 246 TVLIGKS--QRVKGADYAFES--IHNIKEAI 272 (298)
Q Consensus 246 ~v~v~~~--~~~~~ad~i~~s--~~~l~~~l 272 (298)
.++...+ ..+..+|+++.+ +..+.+.+
T Consensus 768 IAmg~~gt~vak~aADivl~dd~f~~I~~~i 798 (1053)
T TIGR01523 768 IAMGINGSDVAKDASDIVLSDDNFASILNAI 798 (1053)
T ss_pred EecCCCccHHHHHhcCEEEecCCHHHHHHHH
Confidence 9875333 357889999965 66655544
No 172
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.12 E-value=0.0019 Score=68.34 Aligned_cols=128 Identities=16% Similarity=0.163 Sum_probs=89.9
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCcc--ceeEeecCCCCCCCCCCCCChhhHHHHHhhhccc
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCF--EGIICFETLNPTHKNTVSDDEDDIAFVESAASTT 173 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (298)
+|.+++.+.++.| ++++.++|+.....+..+.+.+|+..-- +.++.+.++.. .++++..+.++...
T Consensus 547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~------l~~~el~~~~~~~~--- 617 (917)
T COG0474 547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDA------LSDEELAELVEELS--- 617 (917)
T ss_pred CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhh------cCHHHHHHHhhhCc---
Confidence 5667777776665 6999999999999999999999985443 23666655443 12222222221111
Q ss_pred CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360 174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~ 253 (298)
+ +++-.|+--.++.+.+.-...-+.|.||+.||..|.+.|-++..+...|.
T Consensus 618 -------V----------------------fARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gt 668 (917)
T COG0474 618 -------V----------------------FARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGT 668 (917)
T ss_pred -------E----------------------EEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHH
Confidence 1 15666777777777777777789999999999999999999998886443
Q ss_pred --CCCCCCEEeCC
Q 022360 254 --RVKGADYAFES 264 (298)
Q Consensus 254 --~~~~ad~i~~s 264 (298)
++..+|.+..+
T Consensus 669 daak~Aadivl~d 681 (917)
T COG0474 669 DAAKEAADIVLLD 681 (917)
T ss_pred HHHHhhcceEeec
Confidence 46777776654
No 173
>PLN02382 probable sucrose-phosphatase
Probab=97.11 E-value=0.00053 Score=66.12 Aligned_cols=72 Identities=15% Similarity=0.096 Sum_probs=53.7
Q ss_pred CCCCHHHHHHHHHHc---CCCCCcEEEEcCCccchHHHHHcC-CeEEEecCCCC-CC--------CCCEEeCC---HHHH
Q 022360 205 CKPSELAIEKALKIA---SINPQRTLFFEDSVRNIQAGKRVG-LDTVLIGKSQR-VK--------GADYAFES---IHNI 268 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l---~i~p~~~i~iGDs~~Di~~a~~aG-~~~v~v~~~~~-~~--------~ad~i~~s---~~~l 268 (298)
+-.|..+++.+++++ |++++++++|||+.||++|.+.+| .++++.+.... +. .++++..+ -+.+
T Consensus 173 g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI 252 (413)
T PLN02382 173 GAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGI 252 (413)
T ss_pred CCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHH
Confidence 477889999999999 999999999999999999999999 57776554332 21 23444332 3347
Q ss_pred HHHhHHhh
Q 022360 269 KEAIPELW 276 (298)
Q Consensus 269 ~~~l~~~~ 276 (298)
.+.|..+.
T Consensus 253 ~~al~~f~ 260 (413)
T PLN02382 253 IQAIGHFN 260 (413)
T ss_pred HHHHHHhC
Confidence 77777654
No 174
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=97.10 E-value=0.0013 Score=68.13 Aligned_cols=137 Identities=16% Similarity=0.119 Sum_probs=86.1
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 175 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (298)
++.|++.+.++.| +++++++|+.....+..+.+.+|+.+. +++.+++......+..++++..+.++...+
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v---- 514 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADG---- 514 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCE----
Confidence 5678888887776 588999999999999999999999642 232222211000000111112222111110
Q ss_pred CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC-CC
Q 022360 176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS-QR 254 (298)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~-~~ 254 (298)
| .+-.|+--..+.+.+.-...-+.|+||+.||..+.+.|.++.++.... -+
T Consensus 515 ------------f----------------Ar~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvA 566 (755)
T TIGR01647 515 ------------F----------------AEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAA 566 (755)
T ss_pred ------------E----------------EecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHH
Confidence 0 233455566666666666677999999999999999999998876322 24
Q ss_pred CCCCCEEeCC--HHHHHH
Q 022360 255 VKGADYAFES--IHNIKE 270 (298)
Q Consensus 255 ~~~ad~i~~s--~~~l~~ 270 (298)
+..+|.++.+ +..+.+
T Consensus 567 keaADivLl~d~l~~I~~ 584 (755)
T TIGR01647 567 RSAADIVLTEPGLSVIVD 584 (755)
T ss_pred HHhCCEEEEcCChHHHHH
Confidence 7889988765 444443
No 175
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.00 E-value=0.0016 Score=67.26 Aligned_cols=70 Identities=13% Similarity=0.106 Sum_probs=57.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhh
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW 276 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~ 276 (298)
+-.|..+++.+++ +++++.+++|||+.||+.|++.++.....+.-+.....|++.+++.+++..+|..+.
T Consensus 655 ~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~ 724 (726)
T PRK14501 655 GVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPGESRARYRLPSQREVRELLRRLL 724 (726)
T ss_pred CCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCCCCcceEeCCCHHHHHHHHHHHh
Confidence 3677899999999 788899999999999999999975333333334467889999999999999998875
No 176
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=96.94 E-value=0.0041 Score=52.49 Aligned_cols=26 Identities=27% Similarity=0.400 Sum_probs=23.0
Q ss_pred EEEEcCCccchHHHHHcCCeEEEecC
Q 022360 226 TLFFEDSVRNIQAGKRVGLDTVLIGK 251 (298)
Q Consensus 226 ~i~iGDs~~Di~~a~~aG~~~v~v~~ 251 (298)
-|+.|||.+||.+|+++|...+-+.+
T Consensus 187 ~IhYGDSD~Di~AAkeaG~RgIRilR 212 (237)
T COG3700 187 RIHYGDSDNDITAAKEAGARGIRILR 212 (237)
T ss_pred eEEecCCchhhhHHHhcCccceeEEe
Confidence 68999999999999999999887633
No 177
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=96.92 E-value=0.0075 Score=54.55 Aligned_cols=42 Identities=14% Similarity=0.080 Sum_probs=28.8
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHH---HHHHhCCCC
Q 022360 96 ENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVK---VLSRLGLED 137 (298)
Q Consensus 96 ~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~---~l~~l~l~~ 137 (298)
...++.|++.++++.+ +.+++++|+.+...-.. -|...|...
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~ 189 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT 189 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC
Confidence 3467788999988876 47899999987654433 344455543
No 178
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=96.92 E-value=0.0032 Score=67.24 Aligned_cols=138 Identities=11% Similarity=0.065 Sum_probs=86.5
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccc------------------------eeEeecCCCCC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFE------------------------GIICFETLNPT 151 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~------------------------~i~~~~~~~~~ 151 (298)
++.|++.+.++.+ +++++++|+.....+..+.+.+|+..--. .++++.++..
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~- 646 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD- 646 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-
Confidence 4567888777776 58899999999999999999999842110 1222211111
Q ss_pred CCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC
Q 022360 152 HKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFED 231 (298)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGD 231 (298)
.++++..+.+.... ..+ .+.-.|+--..+.+.+.-...-+.|+||
T Consensus 647 -----l~~~el~~~~~~~~--------~~V----------------------faR~sPeqK~~IV~~lq~~g~vv~~~GD 691 (997)
T TIGR01106 647 -----MTSEQLDEILKYHT--------EIV----------------------FARTSPQQKLIIVEGCQRQGAIVAVTGD 691 (997)
T ss_pred -----CCHHHHHHHHHhcC--------CEE----------------------EEECCHHHHHHHHHHHHHCCCEEEEECC
Confidence 00111111110000 001 1455556666666666655567999999
Q ss_pred CccchHHHHHcCCeEEEecCCC--CCCCCCEEeCC--HHHHHHHh
Q 022360 232 SVRNIQAGKRVGLDTVLIGKSQ--RVKGADYAFES--IHNIKEAI 272 (298)
Q Consensus 232 s~~Di~~a~~aG~~~v~v~~~~--~~~~ad~i~~s--~~~l~~~l 272 (298)
+.||+.|.+.|.++.++...|. .+..+|+++.+ +..+.+.+
T Consensus 692 G~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai 736 (997)
T TIGR01106 692 GVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGV 736 (997)
T ss_pred CcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHH
Confidence 9999999999999998864333 57888999887 65555443
No 179
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=96.83 E-value=0.051 Score=53.17 Aligned_cols=37 Identities=14% Similarity=0.225 Sum_probs=28.2
Q ss_pred ChhHHHHHHhCCCcEEEEeCCChHHHHHHHHH-hCCCCc
Q 022360 101 DPVLRSLLLSLPLRKIIFTNADKVHAVKVLSR-LGLEDC 138 (298)
Q Consensus 101 ~~g~~~~L~~l~~~~~ivS~~~~~~~~~~l~~-l~l~~~ 138 (298)
.+...+..+..+ +.+++|..+..+++..++. +|.+..
T Consensus 98 ~~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~V 135 (498)
T PLN02499 98 DMEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADEV 135 (498)
T ss_pred CHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCceE
Confidence 344556666656 8999999999999999987 776543
No 180
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=96.54 E-value=0.0055 Score=51.09 Aligned_cols=51 Identities=18% Similarity=0.252 Sum_probs=43.3
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCC-Ccc-ceeEeecC
Q 022360 97 NLKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLE-DCF-EGIICFET 147 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~-~~f-~~i~~~~~ 147 (298)
...++||+.++|+.+. +.++|+|++...++..+++.++.. .+| +.+++.++
T Consensus 56 ~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~ 110 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDE 110 (156)
T ss_pred EEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEecc
Confidence 4678999999999985 679999999999999999999987 488 55666654
No 181
>PLN02580 trehalose-phosphatase
Probab=96.54 E-value=0.01 Score=56.53 Aligned_cols=71 Identities=17% Similarity=0.191 Sum_probs=57.4
Q ss_pred CCCHHHHHHHHHHcCCCCCc---EEEEcCCccchHHHHHc-----CCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360 206 KPSELAIEKALKIASINPQR---TLFFEDSVRNIQAGKRV-----GLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE 277 (298)
Q Consensus 206 kp~~~~~~~~l~~l~i~p~~---~i~iGDs~~Di~~a~~a-----G~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~ 277 (298)
-.|..+++.++++++++..+ .++|||..||..|++.+ |+.+ .+..+...-.|.|.+.+..++.++|..+..
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I-~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~ 378 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGI-LVSSVPKESNAFYSLRDPSEVMEFLKSLVT 378 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEE-EEecCCCCccceEEcCCHHHHHHHHHHHHH
Confidence 56779999999999998763 38999999999999963 5544 344444566789999999999999988764
No 182
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=96.44 E-value=0.0069 Score=61.88 Aligned_cols=131 Identities=12% Similarity=0.112 Sum_probs=84.5
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCC-hhhHHHHHhhhcccC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDD-EDDIAFVESAASTTT 174 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 174 (298)
+|.+++.+.++.+ ++++.++|+.....++.+.+++|+...-+. +.. ..+.|..|.+- ...+..+......=
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed-~~~---~~~TG~efD~ls~~~~~~~~~~~~vF- 658 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED-VSS---MALTGSEFDDLSDEELDDAVRRVLVF- 658 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc-ccc---cccchhhhhcCCHHHHHHHhhcceEE-
Confidence 6778877777665 699999999999999999999997544331 111 11233333221 11222211111111
Q ss_pred CCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC-
Q 022360 175 SANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ- 253 (298)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~- 253 (298)
..-.|+.-.++.+.|+-..+=+.|-||+.||-.+.+.|.++.+|...|-
T Consensus 659 ------------------------------aR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTd 708 (972)
T KOG0202|consen 659 ------------------------------ARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTD 708 (972)
T ss_pred ------------------------------EecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccH
Confidence 1222345556666666566668899999999999999999999984443
Q ss_pred -CCCCCCEEeCC
Q 022360 254 -RVKGADYAFES 264 (298)
Q Consensus 254 -~~~~ad~i~~s 264 (298)
.+..+|.++.|
T Consensus 709 VaKeAsDMVL~D 720 (972)
T KOG0202|consen 709 VAKEASDMVLAD 720 (972)
T ss_pred hhHhhhhcEEec
Confidence 58888888765
No 183
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.36 E-value=0.017 Score=59.57 Aligned_cols=97 Identities=14% Similarity=0.200 Sum_probs=68.2
Q ss_pred hHHHHHHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchh
Q 022360 103 VLRSLLLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIF 182 (298)
Q Consensus 103 g~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (298)
.+...|+.++++++++|+.+...++.+.+.+|++ .++.--
T Consensus 730 ~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~----~V~aev------------------------------------ 769 (951)
T KOG0207|consen 730 LAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID----NVYAEV------------------------------------ 769 (951)
T ss_pred HHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc----eEEecc------------------------------------
Confidence 3445566667999999999999999999999944 444310
Q ss_pred hhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC-CCCCCCCCEE
Q 022360 183 DIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK-SQRVKGADYA 261 (298)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~~~~~~ad~i 261 (298)
. +.-|.+.++.+.+ +...++|+||+.||-.+...+.++.++... +-+...+|.+
T Consensus 770 ---------------~------P~~K~~~Ik~lq~----~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIV 824 (951)
T KOG0207|consen 770 ---------------L------PEQKAEKIKEIQK----NGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIV 824 (951)
T ss_pred ---------------C------chhhHHHHHHHHh----cCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEE
Confidence 0 1223345555444 445699999999999999888888776644 3457788887
Q ss_pred eCC
Q 022360 262 FES 264 (298)
Q Consensus 262 ~~s 264 (298)
+-.
T Consensus 825 Lmr 827 (951)
T KOG0207|consen 825 LMR 827 (951)
T ss_pred EEc
Confidence 654
No 184
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=96.27 E-value=0.032 Score=50.57 Aligned_cols=40 Identities=25% Similarity=0.367 Sum_probs=33.6
Q ss_pred HHhCCCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecC
Q 022360 108 LLSLPLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFET 147 (298)
Q Consensus 108 L~~l~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~ 147 (298)
|+..+.-+++=|.|..+++.+.++.+++.++|+.+++.+.
T Consensus 154 Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~ 193 (297)
T PF05152_consen 154 LKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGN 193 (297)
T ss_pred HHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCc
Confidence 3444455788899999999999999999999999998753
No 185
>PLN02645 phosphoglycolate phosphatase
Probab=96.10 E-value=0.027 Score=52.24 Aligned_cols=88 Identities=17% Similarity=0.085 Sum_probs=64.5
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHH---HHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhc
Q 022360 98 LKPDPVLRSLLLSL---PLRKIIFTNADKVH---AVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAS 171 (298)
Q Consensus 98 ~~~~~g~~~~L~~l---~~~~~ivS~~~~~~---~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (298)
-.++||+.++|+.| +.+++++||..... ....++.+|+...++.++++.
T Consensus 43 ~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~------------------------- 97 (311)
T PLN02645 43 DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS------------------------- 97 (311)
T ss_pred CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH-------------------------
Confidence 46789999988876 47899999977433 344556788876666666542
Q ss_pred ccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEE
Q 022360 172 TTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVL 248 (298)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~ 248 (298)
......+++.+......++++++..+.+.++.+|+..+.
T Consensus 98 --------------------------------------~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 98 --------------------------------------FAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred --------------------------------------HHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence 456666676666555678888888999999999998764
No 186
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.07 E-value=0.016 Score=60.81 Aligned_cols=74 Identities=15% Similarity=0.133 Sum_probs=58.6
Q ss_pred CCCCHHHHHHHHHH---cCCCCCcEEEEcCCccchHHHHHcCCe-----------EEEecCCCCCCCCCEEeCCHHHHHH
Q 022360 205 CKPSELAIEKALKI---ASINPQRTLFFEDSVRNIQAGKRVGLD-----------TVLIGKSQRVKGADYAFESIHNIKE 270 (298)
Q Consensus 205 ~kp~~~~~~~~l~~---l~i~p~~~i~iGDs~~Di~~a~~aG~~-----------~v~v~~~~~~~~ad~i~~s~~~l~~ 270 (298)
+-.|..+++.++++ +|+.++.+++|||+.||..|++.++-. .+.+.-|.....|.|.+++..++.+
T Consensus 760 gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~ 839 (854)
T PLN02205 760 GVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVR 839 (854)
T ss_pred CCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCCccCeEecCCHHHHHH
Confidence 46778999999754 689999999999999999999988621 1223334456788899999999999
Q ss_pred HhHHhhcc
Q 022360 271 AIPELWES 278 (298)
Q Consensus 271 ~l~~~~~~ 278 (298)
+|..+.+.
T Consensus 840 lL~~L~~~ 847 (854)
T PLN02205 840 LMQGLASV 847 (854)
T ss_pred HHHHHHhc
Confidence 99988753
No 187
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=96.04 E-value=0.026 Score=47.17 Aligned_cols=57 Identities=28% Similarity=0.318 Sum_probs=38.7
Q ss_pred HHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCCCCCCCCE---EeCCHHHHHHHhHHh
Q 022360 215 ALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQRVKGADY---AFESIHNIKEAIPEL 275 (298)
Q Consensus 215 ~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~~~~~ad~---i~~s~~~l~~~l~~~ 275 (298)
+.+.++++ ++|.|+. |-.+.|+++|++++.++..+.+.+++. .+.+..+..+++.+.
T Consensus 129 ~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynRkp~~~niiR~~~w~e~y~~vd~~ 189 (194)
T COG5663 129 AVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNRKPAAKNIIRANNWAEAYEWVDSR 189 (194)
T ss_pred hhHhhccC----ccccccCchHHHHHHhcCCcEEEecCcccccchHHHHHHHHhHHHHHHHHHHH
Confidence 44677775 4899998 788889999999999988876544432 223334444544433
No 188
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=95.81 E-value=0.013 Score=62.97 Aligned_cols=68 Identities=16% Similarity=0.299 Sum_probs=48.5
Q ss_pred CCCCHHHHHHHHHHcCCC-CCcEEEEcCCccchHHHHHcCCeEEEecCC--CCCCCCCEEeCCHHHHHHHh
Q 022360 205 CKPSELAIEKALKIASIN-PQRTLFFEDSVRNIQAGKRVGLDTVLIGKS--QRVKGADYAFESIHNIKEAI 272 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~-p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~--~~~~~ad~i~~s~~~l~~~l 272 (298)
++-.|.--..+.+.+.-. ..-+.++||+.||+.|.+.|.++.-..+.. .+...+|+++.+++.|...|
T Consensus 749 aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 749 CRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred eCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 344455445555544433 567999999999999999998877433333 25778999999988887766
No 189
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=95.78 E-value=0.037 Score=54.61 Aligned_cols=94 Identities=14% Similarity=0.140 Sum_probs=67.2
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCC
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTS 175 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (298)
++.|++.+.+..| +++++++|+........+.+.+|+ + +
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~-~------------------------------ 388 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------F-A------------------------------ 388 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------e-e------------------------------
Confidence 4567777776665 577899999999999999999886 1 1
Q ss_pred CCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCCC
Q 022360 176 ANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRV 255 (298)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~~ 255 (298)
.-.|+--..+.+++.-....+.++||+.||..+.+.++++.++. .+
T Consensus 389 ------------------------------~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~----a~ 434 (499)
T TIGR01494 389 ------------------------------RVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG----AK 434 (499)
T ss_pred ------------------------------ccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc----hH
Confidence 11123333444433333467999999999999999999886654 56
Q ss_pred CCCCEEeCC
Q 022360 256 KGADYAFES 264 (298)
Q Consensus 256 ~~ad~i~~s 264 (298)
..+|.++.+
T Consensus 435 ~~adivl~~ 443 (499)
T TIGR01494 435 AAADIVLLD 443 (499)
T ss_pred HhCCeEEec
Confidence 678888876
No 190
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=95.62 E-value=0.21 Score=45.35 Aligned_cols=48 Identities=19% Similarity=0.138 Sum_probs=37.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC---CeEEEecCC
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG---LDTVLIGKS 252 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG---~~~v~v~~~ 252 (298)
+..|..++.+++++...+..-.++.||..+|=.++..+. -.++-+..+
T Consensus 180 ~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~ 230 (266)
T COG1877 180 GVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVG 230 (266)
T ss_pred CcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCC
Confidence 355779999999988888777999999999988888886 344444444
No 191
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.43 E-value=0.054 Score=52.44 Aligned_cols=40 Identities=20% Similarity=0.187 Sum_probs=35.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCC
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL 244 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~ 244 (298)
=.||.+.++++++++|+.-+..++++|+...-+-.++-+-
T Consensus 309 W~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 309 WDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred CCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence 3788899999999999999999999999988887777764
No 192
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=95.42 E-value=0.049 Score=47.10 Aligned_cols=37 Identities=19% Similarity=0.239 Sum_probs=32.9
Q ss_pred CCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCC
Q 022360 99 KPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGL 135 (298)
Q Consensus 99 ~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l 135 (298)
...|++.++|+.+. +.++|.|.+...++..++..+++
T Consensus 45 ~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~ 83 (195)
T TIGR02245 45 LMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGV 83 (195)
T ss_pred EeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhcc
Confidence 45799999999884 78999999999999999998876
No 193
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.42 E-value=0.09 Score=56.71 Aligned_cols=68 Identities=13% Similarity=0.073 Sum_probs=49.9
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCCCCCCCEEe--CCHHHHHHHhH
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAF--ESIHNIKEAIP 273 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~~~~ad~i~--~s~~~l~~~l~ 273 (298)
..-.|+--..+.+.+.-...-+.|+||+.||..+.+.|-++.++... ++...|+++. +++..+.++|+
T Consensus 783 AR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das~AA~f~l~~~~~~~I~~~I~ 852 (1054)
T TIGR01657 783 ARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EASVAAPFTSKLASISCVPNVIR 852 (1054)
T ss_pred EecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cceeecccccCCCcHHHHHHHHH
Confidence 45556667777776666666799999999999999999999887654 3446677774 45666666554
No 194
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.40 E-value=0.035 Score=53.36 Aligned_cols=90 Identities=17% Similarity=0.191 Sum_probs=70.0
Q ss_pred HHHHhC---CCcEEEEeC--CChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCc
Q 022360 106 SLLLSL---PLRKIIFTN--ADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQ 180 (298)
Q Consensus 106 ~~L~~l---~~~~~ivS~--~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (298)
++.+.+ +.+++++|. -+...++..+...|.+-.-..++.++...-
T Consensus 106 eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl------------------------------ 155 (635)
T COG5610 106 ELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRL------------------------------ 155 (635)
T ss_pred HHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeeh------------------------------
Confidence 445544 477889987 466777888888887644333555544332
Q ss_pred hhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHHHcCCeEEEe
Q 022360 181 IFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGKRVGLDTVLI 249 (298)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v 249 (298)
.|.+...|..+++.-+++|...+.+||+. .|+.++++.|+.+.+.
T Consensus 156 ------------------------~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 156 ------------------------KKNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred ------------------------hcccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHH
Confidence 57888999999999999999999999998 8999999999998764
No 195
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=95.35 E-value=0.079 Score=46.60 Aligned_cols=114 Identities=16% Similarity=0.205 Sum_probs=79.8
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhC---CCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcc
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLG---LEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAAST 172 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~---l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (298)
..++++...++.- +.+++|+|++...-++.++.+.+ +..|+++.
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gy------------------------------ 172 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGY------------------------------ 172 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhh------------------------------
Confidence 4577777777754 58899999998776666665442 22222222
Q ss_pred cCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360 173 TTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 252 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~ 252 (298)
|++ .-| .|-....+..+.+..|.++.++++.-|..+-..+|+.+|+.+.++.++
T Consensus 173 ---------------fDt-~iG----------~K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rP 226 (254)
T KOG2630|consen 173 ---------------FDT-TIG----------LKVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRP 226 (254)
T ss_pred ---------------hhc-ccc----------ceehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecC
Confidence 221 111 577789999999999999999999999999999999999999887554
Q ss_pred CC------CCCCCEEeCCHHHH
Q 022360 253 QR------VKGADYAFESIHNI 268 (298)
Q Consensus 253 ~~------~~~ad~i~~s~~~l 268 (298)
.. ......++.++..|
T Consensus 227 gna~l~dd~~~~y~~i~~F~~l 248 (254)
T KOG2630|consen 227 GNAPLPDDAKVEYCVIWSFEIL 248 (254)
T ss_pred CCCCCCcccccceeeeccchhh
Confidence 32 11124466666554
No 196
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=94.78 E-value=0.19 Score=47.77 Aligned_cols=126 Identities=15% Similarity=0.089 Sum_probs=73.0
Q ss_pred HHHHHHhCCCcEEEEeCCChHHHHHHHHHh---CCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCc
Q 022360 104 LRSLLLSLPLRKIIFTNADKVHAVKVLSRL---GLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQ 180 (298)
Q Consensus 104 ~~~~L~~l~~~~~ivS~~~~~~~~~~l~~l---~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (298)
....++..+.+..++||.+--+......+. ++..+|+.+++...-.-+..+ + ....++.+....
T Consensus 206 ~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e------~----~vlreV~t~~g~--- 272 (424)
T KOG2469|consen 206 LLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHE------G----TVLREVEPQEGL--- 272 (424)
T ss_pred chHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccc------c----ceeeeecccccc---
Confidence 555566677888899988776666555443 567789988876422110000 0 000000000000
Q ss_pred hhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchH-HHHHcCCeEEEecCCC
Q 022360 181 IFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQ-AGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~-~a~~aG~~~v~v~~~~ 253 (298)
+ ..|+.-+|.. -.+.+++.....+++.++....+++++||+. .||. .-++-|+.++++....
T Consensus 273 -l-~~g~~~~p~e---------~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~peL 336 (424)
T KOG2469|consen 273 -L-KNGDNTGPLE---------QGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPEL 336 (424)
T ss_pred -c-cccccCCcch---------hcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehhh
Confidence 0 0111111111 1256667788888888999889999999999 5654 4566799998886544
No 197
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.76 E-value=0.12 Score=45.41 Aligned_cols=38 Identities=16% Similarity=-0.004 Sum_probs=25.1
Q ss_pred CCCHHHHHHHHHHcCC-CCCc-EEEEcCCccchHHHHHcC
Q 022360 206 KPSELAIEKALKIASI-NPQR-TLFFEDSVRNIQAGKRVG 243 (298)
Q Consensus 206 kp~~~~~~~~l~~l~i-~p~~-~i~iGDs~~Di~~a~~aG 243 (298)
..|..+...+++.+.. .+.+ ++.+||+.||+.+....-
T Consensus 190 ~gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~d 229 (274)
T COG3769 190 AGKGQAANWLLETYRRLGGARTTLGLGDGPNDAPLLEVMD 229 (274)
T ss_pred cCccHHHHHHHHHHHhcCceeEEEecCCCCCcccHHHhhh
Confidence 3444556666654432 3344 899999999999886544
No 198
>PLN02151 trehalose-phosphatase
Probab=93.82 E-value=0.26 Score=46.54 Aligned_cols=72 Identities=18% Similarity=0.149 Sum_probs=55.5
Q ss_pred CCCHHHHHHHHHHcCCCCC---cEEEEcCCccchHHHHHcCC----eEEEecCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360 206 KPSELAIEKALKIASINPQ---RTLFFEDSVRNIQAGKRVGL----DTVLIGKSQRVKGADYAFESIHNIKEAIPELWE 277 (298)
Q Consensus 206 kp~~~~~~~~l~~l~i~p~---~~i~iGDs~~Di~~a~~aG~----~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~ 277 (298)
-.|..+++.+++.++.... -.+||||..+|-.+++.+.- -.+.++.+.....|.|.+.+.+++.++|..+..
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~ 346 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAKETNASYSLQEPDEVMEFLERLVE 346 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 4677999999999887533 28999999999988886521 134455444456899999999999999988764
No 199
>PLN03017 trehalose-phosphatase
Probab=93.69 E-value=0.38 Score=45.57 Aligned_cols=72 Identities=17% Similarity=0.147 Sum_probs=56.4
Q ss_pred CCCHHHHHHHHHHcCCCC---CcEEEEcCCccchHHHHHcC----CeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360 206 KPSELAIEKALKIASINP---QRTLFFEDSVRNIQAGKRVG----LDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE 277 (298)
Q Consensus 206 kp~~~~~~~~l~~l~i~p---~~~i~iGDs~~Di~~a~~aG----~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~ 277 (298)
-.|..+++.+++.++... .-.+||||..+|-.+++.+. --.|.|+.......|.|.+.+..++.++|.++..
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~ 360 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVE 360 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 466799999999998753 35899999999999988773 1245555434457799999999999999998854
No 200
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=93.22 E-value=0.12 Score=41.61 Aligned_cols=15 Identities=33% Similarity=0.461 Sum_probs=13.2
Q ss_pred cEEEEeCCCCccCCC
Q 022360 15 DCLLFDLDDTLYPYS 29 (298)
Q Consensus 15 k~viFDlDGTL~d~~ 29 (298)
|+|+||+||||+...
T Consensus 2 K~i~~DiDGTL~~~~ 16 (126)
T TIGR01689 2 KRLVMDLDNTITLTE 16 (126)
T ss_pred CEEEEeCCCCcccCC
Confidence 799999999999753
No 201
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=92.55 E-value=0.64 Score=41.45 Aligned_cols=46 Identities=11% Similarity=-0.088 Sum_probs=40.8
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC
Q 022360 206 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK 251 (298)
Q Consensus 206 kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~ 251 (298)
..|.+.|+++.+++|-+....++|||+..-=.+|+..+|+++-+..
T Consensus 213 vGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~ 258 (274)
T TIGR01658 213 VGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDL 258 (274)
T ss_pred cchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeec
Confidence 4456999999999999788999999999999999999999996643
No 202
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=92.14 E-value=0.35 Score=43.24 Aligned_cols=54 Identities=13% Similarity=0.155 Sum_probs=36.3
Q ss_pred CCCChhhHHHHhhcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCC
Q 022360 78 YDFDYDDYHSFVHGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGL 135 (298)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l 135 (298)
..+....+.+.+.+ ..+.+.+|+.++++.| ++++.|+|.+-...++.++++.+.
T Consensus 73 ~~l~k~~i~~~V~~----s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~ 129 (246)
T PF05822_consen 73 QGLTKSEIEEAVKE----SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGV 129 (246)
T ss_dssp HT-BGGGHHHHHHC----S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT-
T ss_pred cCcCHHHHHHHHHh----cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCC
Confidence 34446667766665 4567788888887776 488999999999999999998864
No 203
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=91.67 E-value=0.28 Score=48.09 Aligned_cols=88 Identities=10% Similarity=0.205 Sum_probs=65.9
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCC
Q 022360 100 PDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSA 176 (298)
Q Consensus 100 ~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (298)
..||+.+-+.+| +++.+.+|+.++-....+....|+++|+..
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAe----------------------------------- 492 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAE----------------------------------- 492 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhhc-----------------------------------
Confidence 357777665554 699999999999999999999999876421
Q ss_pred CCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCC
Q 022360 177 NGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKS 252 (298)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~ 252 (298)
++| +--..+.++.+-...=+.|.||+-||..+...+..+.+|-...
T Consensus 493 ----------------------------atP--EdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGT 538 (681)
T COG2216 493 ----------------------------ATP--EDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGT 538 (681)
T ss_pred ----------------------------CCh--HHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhcccc
Confidence 233 4444555555556666889999999999999888888876444
No 204
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=91.31 E-value=0.73 Score=47.77 Aligned_cols=159 Identities=9% Similarity=0.038 Sum_probs=89.7
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeecCCCCCCCCCCCC--ChhhHHHHHhhhccc
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSD--DEDDIAFVESAASTT 173 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 173 (298)
+..||+.+.++.+ ++.+-.+|+.+...++.+....|+..-=+. .....|..|-. +++-.+.+....+..
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d------~~~lEG~eFr~~s~ee~~~i~pkl~VlA 720 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD------FLALEGKEFRELSQEERDKIWPKLRVLA 720 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc------cceecchhhhhcCHHHHHhhhhhheeee
Confidence 3468888888776 477889999999999999999987432111 11122222211 122222222222222
Q ss_pred CCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEec--C
Q 022360 174 TSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIG--K 251 (298)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~--~ 251 (298)
.+.. -.|-...+.+ .+. .+=+.+-||+.||-.+.+.|.++.+|.- .
T Consensus 721 RSSP----------------------------~DK~lLVk~L-~~~---g~VVAVTGDGTNDaPALkeADVGlAMGIaGT 768 (1034)
T KOG0204|consen 721 RSSP----------------------------NDKHLLVKGL-IKQ---GEVVAVTGDGTNDAPALKEADVGLAMGIAGT 768 (1034)
T ss_pred cCCC----------------------------chHHHHHHHH-Hhc---CcEEEEecCCCCCchhhhhcccchhccccch
Confidence 1111 1111222222 222 2235577999999999999999999873 3
Q ss_pred CCCCCCCCEEeCCHHHHHHHhHH-hhccCcccccCCCceeeeeecc
Q 022360 252 SQRVKGADYAFESIHNIKEAIPE-LWESDMKSEVGYPGQVAVETSV 296 (298)
Q Consensus 252 ~~~~~~ad~i~~s~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~ 296 (298)
.-+++.+|.++.+ +++..+... .|++.--.....--|+..+-.|
T Consensus 769 eVAKEaSDIIi~D-DNFssIVk~v~WGR~VY~nIqKFiQFQLTVNV 813 (1034)
T KOG0204|consen 769 EVAKEASDIIILD-DNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNV 813 (1034)
T ss_pred hhhhhhCCeEEEc-CchHHHHHHHHhhhHHHHHHHHhheeEEEEEE
Confidence 4468999999876 555555544 3665433333333344443333
No 205
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=91.09 E-value=0.2 Score=42.91 Aligned_cols=27 Identities=26% Similarity=0.395 Sum_probs=20.7
Q ss_pred EEEEeCCCCccCCC-ccHHHHHHHHHHH
Q 022360 16 CLLFDLDDTLYPYS-SGIAAACGQNIKD 42 (298)
Q Consensus 16 ~viFDlDGTL~d~~-~~~~~~~~~~~~~ 42 (298)
+|+||+||||++.. ..+.....+++.+
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~ 28 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALER 28 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHH
Confidence 47899999999865 4566666666666
No 206
>PLN03190 aminophospholipid translocase; Provisional
Probab=91.02 E-value=0.25 Score=53.87 Aligned_cols=67 Identities=15% Similarity=0.226 Sum_probs=46.3
Q ss_pred CCCCHHHHHHHHHHcCCC-CCcEEEEcCCccchHHHHHcCCeEEEecC-C--CCCCCCCEEeCCHHHHHHHh
Q 022360 205 CKPSELAIEKALKIASIN-PQRTLFFEDSVRNIQAGKRVGLDTVLIGK-S--QRVKGADYAFESIHNIKEAI 272 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~-p~~~i~iGDs~~Di~~a~~aG~~~v~v~~-~--~~~~~ad~i~~s~~~l~~~l 272 (298)
++-.|.--..+.+.+.-. +.-|++|||+.||+.|.+.|.+++ ++.. . .+...+|+.+..++.|...|
T Consensus 852 cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI-GIsG~EG~qA~~aSDfaI~~Fr~L~rLL 922 (1178)
T PLN03190 852 CRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV-GISGQEGRQAVMASDFAMGQFRFLVPLL 922 (1178)
T ss_pred ecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeee-eecCchhHHHHHhhccchhhhHHHHHHH
Confidence 344444444444433321 345899999999999999998776 3332 2 25788999999999988766
No 207
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=90.85 E-value=0.41 Score=44.71 Aligned_cols=122 Identities=20% Similarity=0.200 Sum_probs=72.3
Q ss_pred CChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHh---CCCCccceeEeecCCCCCCCCCCCCCh----hhHHHHHhh
Q 022360 100 PDPVLRSLLLSLP---LRKIIFTNADKVHAVKVLSRL---GLEDCFEGIICFETLNPTHKNTVSDDE----DDIAFVESA 169 (298)
Q Consensus 100 ~~~g~~~~L~~l~---~~~~ivS~~~~~~~~~~l~~l---~l~~~f~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 169 (298)
..|.+..+|++|+ .++.++||++-..+..-++.+ ++.++||.++..-+-..+ +.|.. -+.++-.+.
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~F----ftde~rPfR~~dek~~sl 316 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEF----FTDERRPFRKYDEKRGSL 316 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcc----cccccCcchhhcccccch
Confidence 3467777777774 779999999999888766655 355688888765322210 11110 000110001
Q ss_pred hcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cchHHHH-HcCCeEE
Q 022360 170 ASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV-RNIQAGK-RVGLDTV 247 (298)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~-~Di~~a~-~aG~~~v 247 (298)
.-.+..+ +.||.+.-. -.+...++.-++...++++|||.. +|+.... ..||.+.
T Consensus 317 ~wdkv~k---------------------lekgkiYy~---G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTg 372 (510)
T KOG2470|consen 317 LWDKVDK---------------------LEKGKIYYQ---GNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTG 372 (510)
T ss_pred hhhhhhh---------------------cccCceeee---ccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccc
Confidence 1000000 111111111 346777888899999999999998 8988776 8899876
Q ss_pred Ee
Q 022360 248 LI 249 (298)
Q Consensus 248 ~v 249 (298)
.+
T Consensus 373 AI 374 (510)
T KOG2470|consen 373 AI 374 (510)
T ss_pred cc
Confidence 55
No 208
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=89.95 E-value=1.4 Score=39.96 Aligned_cols=49 Identities=20% Similarity=0.219 Sum_probs=32.7
Q ss_pred CCCCChhHHHHHHhCC---CcEEEEeCCC---hHHHHHHHHHhCCCCccceeEee
Q 022360 97 NLKPDPVLRSLLLSLP---LRKIIFTNAD---KVHAVKVLSRLGLEDCFEGIICF 145 (298)
Q Consensus 97 ~~~~~~g~~~~L~~l~---~~~~ivS~~~---~~~~~~~l~~l~l~~~f~~i~~~ 145 (298)
...+.||+.++|+.|+ .+++++||.. .......++.+|+..-.+.++++
T Consensus 16 ~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts 70 (279)
T TIGR01452 16 GERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSS 70 (279)
T ss_pred CCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecH
Confidence 3457788888888774 7789999854 33444566778875444555543
No 209
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=89.59 E-value=0.94 Score=46.07 Aligned_cols=61 Identities=13% Similarity=0.221 Sum_probs=41.8
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecC--CCCCCCCCEEeCCHHHHHHHh
Q 022360 209 ELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGK--SQRVKGADYAFESIHNIKEAI 272 (298)
Q Consensus 209 ~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~--~~~~~~ad~i~~s~~~l~~~l 272 (298)
+++.+.+.++-+ .++-+|||+.||+.|.+.|..+.-.++. ..+.-.||+-+..+..+.+.|
T Consensus 770 A~v~~llq~~t~---krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 770 AQVVRLLQKKTG---KRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLL 832 (1051)
T ss_pred HHHHHHHHHhhC---ceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHh
Confidence 455555555444 6788999999999999888655443433 234567888877777766654
No 210
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=89.58 E-value=2.7 Score=45.10 Aligned_cols=40 Identities=15% Similarity=0.088 Sum_probs=34.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCcE-EEEcCCcc-chHHHHHcCCe
Q 022360 205 CKPSELAIEKALKIASINPQRT-LFFEDSVR-NIQAGKRVGLD 245 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~-i~iGDs~~-Di~~a~~aG~~ 245 (298)
...|.++++++..++|++.+++ +++||+.| |++... .|..
T Consensus 954 ~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll-~G~~ 995 (1050)
T TIGR02468 954 LASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLL-GGLH 995 (1050)
T ss_pred CCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHh-CCce
Confidence 5888999999999999999999 55999998 988773 3544
No 211
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=89.14 E-value=0.62 Score=38.59 Aligned_cols=49 Identities=10% Similarity=0.109 Sum_probs=36.5
Q ss_pred CCCCHHHHHHHHHH-cC----CCCCcEEEEcCCc-cchHHHHHcCCeEEEecCCC
Q 022360 205 CKPSELAIEKALKI-AS----INPQRTLFFEDSV-RNIQAGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 205 ~kp~~~~~~~~l~~-l~----i~p~~~i~iGDs~-~Di~~a~~aG~~~v~v~~~~ 253 (298)
.+-||..-..+++. ++ ..+++++||||.+ +||.+|+..|.-.+|...+-
T Consensus 116 s~kKP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv 170 (190)
T KOG2961|consen 116 SVKKPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGV 170 (190)
T ss_pred cccCCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEecccc
Confidence 34444444444443 33 4789999999999 99999999999999886654
No 212
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=85.84 E-value=4.1 Score=37.02 Aligned_cols=155 Identities=15% Similarity=0.124 Sum_probs=85.6
Q ss_pred CCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHH---HHHHH-hCCCCccceeEeecCCCCCCCCCCCCChhhHHHHH
Q 022360 95 YENLKPDPVLRSLLLSLP---LRKIIFTNADKVHAV---KVLSR-LGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVE 167 (298)
Q Consensus 95 ~~~~~~~~g~~~~L~~l~---~~~~ivS~~~~~~~~---~~l~~-l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (298)
+....++||+.++|+.|+ .+++++||++...-+ ..++. .+++--.+.++++..... ++++.
T Consensus 20 ~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at~----------~~l~~-- 87 (269)
T COG0647 20 YRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATA----------DYLAK-- 87 (269)
T ss_pred EeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHHH----------HHHHh--
Confidence 467889999999999774 789999997555433 34444 455556677887754332 11111
Q ss_pred hhhcccCCCCCCchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCC------CC--CcEEEEcCCc----cc
Q 022360 168 SAASTTTSANGPQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASI------NP--QRTLFFEDSV----RN 235 (298)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i------~p--~~~i~iGDs~----~D 235 (298)
......++-+ + ...+...++.+|+ ++ -.++.+|... .+
T Consensus 88 -------~~~~~kv~vi--------------------G---~~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~ 137 (269)
T COG0647 88 -------QKPGKKVYVI--------------------G---EEGLKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEK 137 (269)
T ss_pred -------hCCCCEEEEE--------------------C---CcchHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHH
Confidence 0000111100 1 2456677777774 12 1366677665 22
Q ss_pred ---hHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhhccCcccccCCCceeee
Q 022360 236 ---IQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYPGQVAV 292 (298)
Q Consensus 236 ---i~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 292 (298)
..-+...|+.++.-+........+-....--.+...+++.-+... .-+|.|.+...
T Consensus 138 l~~a~~~i~~g~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~-~~~GKP~~~i~ 196 (269)
T COG0647 138 LAEALLAIAAGAPFIATNPDLTVPTERGLRPGAGAIAALLEQATGREP-TVIGKPSPAIY 196 (269)
T ss_pred HHHHHHHHHcCCcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcc-cccCCCCHHHH
Confidence 222344466666555544443444444555566677776655444 46677665443
No 213
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=83.88 E-value=6.9 Score=32.64 Aligned_cols=21 Identities=24% Similarity=0.245 Sum_probs=18.8
Q ss_pred EEEEcCCccchHHHHHcCCeE
Q 022360 226 TLFFEDSVRNIQAGKRVGLDT 246 (298)
Q Consensus 226 ~i~iGDs~~Di~~a~~aG~~~ 246 (298)
...||.+.+|+.+-+++|+..
T Consensus 122 ~agfGN~~tDv~aY~~vGip~ 142 (157)
T PF08235_consen 122 YAGFGNRSTDVIAYKAVGIPK 142 (157)
T ss_pred EEecCCcHHHHHHHHHcCCCh
Confidence 568999999999999999883
No 214
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=82.76 E-value=6.7 Score=35.39 Aligned_cols=40 Identities=13% Similarity=0.236 Sum_probs=30.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~ 253 (298)
+-+|..+++.+ .| =|+|+|....++.|. .++.++.|.++.
T Consensus 222 G~~K~~vL~~~------~p--hIFFDDQ~~H~~~a~-~~vps~hVP~gv 261 (264)
T PF06189_consen 222 GLPKGPVLKAF------RP--HIFFDDQDGHLESAS-KVVPSGHVPYGV 261 (264)
T ss_pred CCchhHHHHhh------CC--CEeecCchhhhhHhh-cCCCEEeccCCc
Confidence 56666665543 23 479999999999998 788899887764
No 215
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=82.74 E-value=14 Score=35.16 Aligned_cols=43 Identities=19% Similarity=0.075 Sum_probs=37.4
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEe
Q 022360 206 KPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLI 249 (298)
Q Consensus 206 kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v 249 (298)
-.|...|++|.+++|- ....++|||+...-.+|++..|++.-+
T Consensus 408 iGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI 450 (468)
T KOG3107|consen 408 IGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRI 450 (468)
T ss_pred ccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEee
Confidence 3445899999999997 678899999999999999999999854
No 216
>PLN02580 trehalose-phosphatase
Probab=82.73 E-value=2.3 Score=40.72 Aligned_cols=35 Identities=9% Similarity=0.145 Sum_probs=25.7
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHH
Q 022360 98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSR 132 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~ 132 (298)
..+.|++.+.|+.|. .+++|+|+.+...+...+.-
T Consensus 140 A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 140 ALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred ccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 345567777777773 56999999988877776653
No 217
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=80.72 E-value=0.085 Score=47.65 Aligned_cols=48 Identities=17% Similarity=0.214 Sum_probs=37.3
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCC-CCccceeEee
Q 022360 98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGL-EDCFEGIICF 145 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l-~~~f~~i~~~ 145 (298)
+.-.|++.++|+... +.+++.|.+...+..+++..+.- ...|...+..
T Consensus 130 V~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR 180 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYR 180 (262)
T ss_pred EEcCCCHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecc
Confidence 456799999999987 67889999999999999998864 4444444433
No 218
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=80.02 E-value=2.6 Score=43.86 Aligned_cols=45 Identities=16% Similarity=0.114 Sum_probs=34.7
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360 209 ELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 209 ~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~ 253 (298)
|.--+.++..+.--..-++|.||+-||+-+.+.|..++++.+.+.
T Consensus 792 P~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 792 PKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred hhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCCh
Confidence 344455555555555679999999999999999999999886654
No 219
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=76.71 E-value=3.7 Score=43.17 Aligned_cols=73 Identities=11% Similarity=-0.001 Sum_probs=53.8
Q ss_pred CCCCHHHHHHHHHHc------CCCCCcEEEEcCCc-cchHHHHHcCCe------------------------------EE
Q 022360 205 CKPSELAIEKALKIA------SINPQRTLFFEDSV-RNIQAGKRVGLD------------------------------TV 247 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l------~i~p~~~i~iGDs~-~Di~~a~~aG~~------------------------------~v 247 (298)
+-.|..+++.+++++ +..++=++++||.. .|=.|++..+-. ++
T Consensus 676 gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (797)
T PLN03063 676 GVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYF 755 (797)
T ss_pred CCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceE
Confidence 467789999999976 33566799999975 476676655421 12
Q ss_pred EecCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360 248 LIGKSQRVKGADYAFESIHNIKEAIPELWE 277 (298)
Q Consensus 248 ~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~ 277 (298)
.+.-|.....|.|-+++..|+.++|..+..
T Consensus 756 ~v~VG~~~s~A~y~l~~~~eV~~lL~~l~~ 785 (797)
T PLN03063 756 SCAIGQARTKARYVLDSSNDVVSLLHKLAV 785 (797)
T ss_pred EEEECCCCccCeecCCCHHHHHHHHHHHhc
Confidence 333455678899999999999999988864
No 220
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=76.65 E-value=1.9 Score=46.57 Aligned_cols=67 Identities=19% Similarity=0.273 Sum_probs=42.9
Q ss_pred CCCCCCHHHHHHHHHHcC-CCCCcEEEEcCCccchHHHHHcCCeEEEecC--CCCCCCCCEEeCCHHHHH
Q 022360 203 IACKPSELAIEKALKIAS-INPQRTLFFEDSVRNIQAGKRVGLDTVLIGK--SQRVKGADYAFESIHNIK 269 (298)
Q Consensus 203 ~~~kp~~~~~~~~l~~l~-i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~--~~~~~~ad~i~~s~~~l~ 269 (298)
++|+..|.-...+.+... ..+.-+++|||+.||+.|.+.|.+++-..+. -.+...+|+.+.-+.=|.
T Consensus 773 iCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~ 842 (1151)
T KOG0206|consen 773 ICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLE 842 (1151)
T ss_pred EEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHh
Confidence 356666655555555542 3456799999999999999987655432222 234566777766555443
No 221
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=75.79 E-value=2.5 Score=37.47 Aligned_cols=29 Identities=17% Similarity=0.211 Sum_probs=18.6
Q ss_pred ccEEEEeCCCCccCCC-----ccHHHHHHHHHHH
Q 022360 14 YDCLLFDLDDTLYPYS-----SGIAAACGQNIKD 42 (298)
Q Consensus 14 ~k~viFDlDGTL~d~~-----~~~~~~~~~~~~~ 42 (298)
..+++||+||||++.. ........+.+.+
T Consensus 3 ~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~ 36 (244)
T TIGR00685 3 KRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQK 36 (244)
T ss_pred cEEEEEecCccccCCcCCCcccCCCHHHHHHHHH
Confidence 3689999999999732 1233445555555
No 222
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=75.02 E-value=3.9 Score=43.56 Aligned_cols=38 Identities=16% Similarity=0.295 Sum_probs=30.0
Q ss_pred CCCChhHHHHHHhCC----CcEEEEeCCChHHHHHHHHHhCC
Q 022360 98 LKPDPVLRSLLLSLP----LRKIIFTNADKVHAVKVLSRLGL 135 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~----~~~~ivS~~~~~~~~~~l~~l~l 135 (298)
..+.|++.++|+.|- ..++|+|+.+...++..+...++
T Consensus 621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L 662 (934)
T PLN03064 621 LRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDM 662 (934)
T ss_pred cCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCc
Confidence 456788888888873 56999999999999988876543
No 223
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=74.48 E-value=3.3 Score=36.45 Aligned_cols=60 Identities=15% Similarity=0.221 Sum_probs=31.5
Q ss_pred CCCCHHHHHHHHHHcCCC---CCcEEEEcCCccchHHHHHcCCe-----EEEecCCC---CCCCCCEEeCC
Q 022360 205 CKPSELAIEKALKIASIN---PQRTLFFEDSVRNIQAGKRVGLD-----TVLIGKSQ---RVKGADYAFES 264 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~---p~~~i~iGDs~~Di~~a~~aG~~-----~v~v~~~~---~~~~ad~i~~s 264 (298)
+..|..+++.++++++.. +.-++++||..+|-.|++.+.-. .+.+.... ....|.|-+++
T Consensus 163 ~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 163 GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 355789999999999876 77899999999999999987543 44444432 34556665554
No 224
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=72.36 E-value=18 Score=32.21 Aligned_cols=49 Identities=12% Similarity=0.209 Sum_probs=36.2
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeC---CChHHHHHHHHHhCCCCccceeEeec
Q 022360 98 LKPDPVLRSLLLSL---PLRKIIFTN---ADKVHAVKVLSRLGLEDCFEGIICFE 146 (298)
Q Consensus 98 ~~~~~g~~~~L~~l---~~~~~ivS~---~~~~~~~~~l~~l~l~~~f~~i~~~~ 146 (298)
-.+.|++.++|+.| +.+++++|| .....+...++.+|+....+.++++.
T Consensus 16 ~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~ 70 (249)
T TIGR01457 16 KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTAS 70 (249)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHH
Confidence 34567888888776 477999997 44666677888889876667787764
No 225
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=71.66 E-value=1.8 Score=30.23 Aligned_cols=25 Identities=20% Similarity=0.375 Sum_probs=16.6
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccchHHHH
Q 022360 212 IEKALKIASINPQRTLFFEDSVRNIQAGK 240 (298)
Q Consensus 212 ~~~~l~~l~i~p~~~i~iGDs~~Di~~a~ 240 (298)
.+.+++++|+ .|++||..+|++++.
T Consensus 7 VqQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHCCE----EEEeCChHHHHHHHH
Confidence 5778899998 899999999999875
No 226
>PLN03017 trehalose-phosphatase
Probab=71.30 E-value=3.5 Score=39.16 Aligned_cols=29 Identities=17% Similarity=0.211 Sum_probs=20.3
Q ss_pred ccEEEEeCCCCcc---C-CCc-cHHHHHHHHHHH
Q 022360 14 YDCLLFDLDDTLY---P-YSS-GIAAACGQNIKD 42 (298)
Q Consensus 14 ~k~viFDlDGTL~---d-~~~-~~~~~~~~~~~~ 42 (298)
--+|++|+||||+ + ... .+.....+.+++
T Consensus 111 ~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~ 144 (366)
T PLN03017 111 QIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKK 144 (366)
T ss_pred CeEEEEecCCcCcCCcCCcccccCCHHHHHHHHH
Confidence 3577779999999 3 233 566777776666
No 227
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=69.96 E-value=3.6 Score=42.65 Aligned_cols=30 Identities=23% Similarity=0.338 Sum_probs=20.2
Q ss_pred CccEEEEeCCCCccCCC-----ccHHHHHHHHHHH
Q 022360 13 KYDCLLFDLDDTLYPYS-----SGIAAACGQNIKD 42 (298)
Q Consensus 13 ~~k~viFDlDGTL~d~~-----~~~~~~~~~~~~~ 42 (298)
+.++|+||+||||++.. ........+.+.+
T Consensus 491 ~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~ 525 (726)
T PRK14501 491 SRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRR 525 (726)
T ss_pred cceEEEEecCccccCCCCCcccCCCCHHHHHHHHH
Confidence 45899999999999732 2234555555555
No 228
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=69.74 E-value=15 Score=33.05 Aligned_cols=52 Identities=12% Similarity=0.077 Sum_probs=33.2
Q ss_pred CCChhhHHHHhhcccCCCCCCCChhHHHHHHh---CCCcEEEEeCCChHHHHHHHHHhC
Q 022360 79 DFDYDDYHSFVHGRLPYENLKPDPVLRSLLLS---LPLRKIIFTNADKVHAVKVLSRLG 134 (298)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~---l~~~~~ivS~~~~~~~~~~l~~l~ 134 (298)
.++...+.+.+.+ ......+|..++... ..+++.|+|.+-...++.+.+...
T Consensus 122 ~f~k~~I~~~Va~----s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~ 176 (298)
T KOG3128|consen 122 GFSKNAIDDIVAE----SNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKL 176 (298)
T ss_pred CcCHHHHHHHHHH----hhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHh
Confidence 3445555555544 334445566655554 458999999998888887775543
No 229
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=67.82 E-value=5 Score=42.48 Aligned_cols=30 Identities=23% Similarity=0.325 Sum_probs=20.1
Q ss_pred CccEEEEeCCCCccCCCc---cHHHHHHHHHHH
Q 022360 13 KYDCLLFDLDDTLYPYSS---GIAAACGQNIKD 42 (298)
Q Consensus 13 ~~k~viFDlDGTL~d~~~---~~~~~~~~~~~~ 42 (298)
+.++|++|+||||++... .......+.+.+
T Consensus 595 ~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~ 627 (854)
T PLN02205 595 TTRAILLDYDGTLMPQASIDKSPSSKSIDILNT 627 (854)
T ss_pred cCeEEEEecCCcccCCccccCCCCHHHHHHHHH
Confidence 468999999999997542 233445555555
No 230
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=65.20 E-value=2.4 Score=34.66 Aligned_cols=27 Identities=30% Similarity=0.438 Sum_probs=22.0
Q ss_pred CCCCCCChhHHHHHHhCC--CcEEEEeCC
Q 022360 95 YENLKPDPVLRSLLLSLP--LRKIIFTNA 121 (298)
Q Consensus 95 ~~~~~~~~g~~~~L~~l~--~~~~ivS~~ 121 (298)
.+.+...|++.+++++|- +.++|+|..
T Consensus 64 FRnL~V~p~aq~v~keLt~~y~vYivtaa 92 (180)
T COG4502 64 FRNLGVQPFAQTVLKELTSIYNVYIVTAA 92 (180)
T ss_pred hhhcCccccHHHHHHHHHhhheEEEEEec
Confidence 356778899999999984 778999876
No 231
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=63.34 E-value=8.5 Score=33.46 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=24.7
Q ss_pred ccEEEEeCCCCccCCCccHHHHHHHHHHHHHHHH
Q 022360 14 YDCLLFDLDDTLYPYSSGIAAACGQNIKDYMVEK 47 (298)
Q Consensus 14 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~ 47 (298)
--+++||+||||......+.+.+...+++ +++.
T Consensus 11 ~~l~lfdvdgtLt~~r~~~~~e~~~~l~~-lr~~ 43 (252)
T KOG3189|consen 11 ETLCLFDVDGTLTPPRQKVTPEMLEFLQK-LRKK 43 (252)
T ss_pred ceEEEEecCCccccccccCCHHHHHHHHH-Hhhh
Confidence 35889999999998877777777766666 4433
No 232
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=61.91 E-value=9.2 Score=36.39 Aligned_cols=45 Identities=22% Similarity=0.316 Sum_probs=33.7
Q ss_pred CCHHHHHHHHHHc----CCCCCcEEEEcCCc-----cchHHHHHcCCeEEEecCCC
Q 022360 207 PSELAIEKALKIA----SINPQRTLFFEDSV-----RNIQAGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 207 p~~~~~~~~l~~l----~i~p~~~i~iGDs~-----~Di~~a~~aG~~~v~v~~~~ 253 (298)
.|..++..+.+-+ ++.|++|+.|||.. ||.. |+.+| .++|++.+.
T Consensus 349 dKs~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDfk-aR~a~-~t~WIasP~ 402 (408)
T PF06437_consen 349 DKSLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDFK-ARLAC-TTAWIASPQ 402 (408)
T ss_pred CcHHhHHHHHHHHHhccCCCccceeeehhhhhccCCcchh-hhhhc-eeeEecCHH
Confidence 3457777777777 89999999999975 7776 44444 678887654
No 233
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=60.23 E-value=4.5 Score=37.59 Aligned_cols=48 Identities=15% Similarity=0.250 Sum_probs=33.9
Q ss_pred CCCCHHHHHH-------HHHHcCC--CCCcEEEEcCCc-cchHHHH---------------HcCCeEEEecCC
Q 022360 205 CKPSELAIEK-------ALKIASI--NPQRTLFFEDSV-RNIQAGK---------------RVGLDTVLIGKS 252 (298)
Q Consensus 205 ~kp~~~~~~~-------~l~~l~i--~p~~~i~iGDs~-~Di~~a~---------------~aG~~~v~v~~~ 252 (298)
+||..--|++ ..++.+. +++...+|||+. .|+..|+ .-||-++++..|
T Consensus 270 GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TG 342 (389)
T KOG1618|consen 270 GKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTG 342 (389)
T ss_pred CCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeee
Confidence 7888644443 3333332 567789999998 9999997 668888888544
No 234
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=59.89 E-value=5.8 Score=32.96 Aligned_cols=16 Identities=38% Similarity=0.522 Sum_probs=13.6
Q ss_pred cEEEEeCCCCccCCCc
Q 022360 15 DCLLFDLDDTLYPYSS 30 (298)
Q Consensus 15 k~viFDlDGTL~d~~~ 30 (298)
+++++|+|+||+.+..
T Consensus 2 ~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 2 KTLVLDLDETLVHSTF 17 (162)
T ss_pred cEEEEcCCCCcCCCCC
Confidence 5899999999998643
No 235
>PLN02151 trehalose-phosphatase
Probab=59.52 E-value=8 Score=36.59 Aligned_cols=29 Identities=17% Similarity=0.270 Sum_probs=19.6
Q ss_pred ccEEEEeCCCCccC----CCc-cHHHHHHHHHHH
Q 022360 14 YDCLLFDLDDTLYP----YSS-GIAAACGQNIKD 42 (298)
Q Consensus 14 ~k~viFDlDGTL~d----~~~-~~~~~~~~~~~~ 42 (298)
-.++++|+||||.+ -.. .+......+++.
T Consensus 98 ~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~ 131 (354)
T PLN02151 98 QIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRK 131 (354)
T ss_pred ceEEEEecCccCCCCCCCcccccCCHHHHHHHHH
Confidence 35788899999993 222 456666666666
No 236
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=57.99 E-value=7.3 Score=32.26 Aligned_cols=17 Identities=35% Similarity=0.376 Sum_probs=14.3
Q ss_pred ccEEEEeCCCCccCCCc
Q 022360 14 YDCLLFDLDDTLYPYSS 30 (298)
Q Consensus 14 ~k~viFDlDGTL~d~~~ 30 (298)
..++++|+|.||+++..
T Consensus 6 kl~LVLDLDeTLihs~~ 22 (156)
T TIGR02250 6 KLHLVLDLDQTLIHTTK 22 (156)
T ss_pred ceEEEEeCCCCcccccc
Confidence 46899999999999654
No 237
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=56.28 E-value=18 Score=32.52 Aligned_cols=63 Identities=16% Similarity=0.254 Sum_probs=47.4
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCc------cchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhh
Q 022360 210 LAIEKALKIASINPQRTLFFEDSV------RNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW 276 (298)
Q Consensus 210 ~~~~~~l~~l~i~p~~~i~iGDs~------~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~ 276 (298)
+.=..+++++++ ++++-=||- .=+++|++.|++++++.++.. ..+..++.+++++.+.|++++
T Consensus 187 e~n~al~~~~~i---~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~-~~~~~~~~~~~el~~~l~~~~ 255 (256)
T TIGR00715 187 ELEKALLREYRI---DAVVTKASGEQGGELEKVKAAEALGINVIRIARPQT-IPGVAIFDDISQLNQFVARLL 255 (256)
T ss_pred HHHHHHHHHcCC---CEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCC-CCCCccCCCHHHHHHHHHHhc
Confidence 444667778887 356655553 448999999999999998864 344568899999999998764
No 238
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=56.16 E-value=73 Score=27.93 Aligned_cols=51 Identities=25% Similarity=0.214 Sum_probs=34.1
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCC---hHHHHHHHHH-hCCCCccceeEeec
Q 022360 96 ENLKPDPVLRSLLLSL---PLRKIIFTNAD---KVHAVKVLSR-LGLEDCFEGIICFE 146 (298)
Q Consensus 96 ~~~~~~~g~~~~L~~l---~~~~~ivS~~~---~~~~~~~l~~-l~l~~~f~~i~~~~ 146 (298)
....++|++.+.|+.+ +.++.++||.. .......+.. +|+.--.+.++++.
T Consensus 11 ~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~ 68 (236)
T TIGR01460 11 LGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSG 68 (236)
T ss_pred cCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHH
Confidence 3445688999999887 57899999754 3333344444 67765567777654
No 239
>PLN02382 probable sucrose-phosphatase
Probab=55.73 E-value=12 Score=36.13 Aligned_cols=34 Identities=15% Similarity=0.165 Sum_probs=21.9
Q ss_pred CCCHHHHHHHHHHcCCC----CCcEEEEcCCc-cchHHH
Q 022360 206 KPSELAIEKALKIASIN----PQRTLFFEDSV-RNIQAG 239 (298)
Q Consensus 206 kp~~~~~~~~l~~l~i~----p~~~i~iGDs~-~Di~~a 239 (298)
.+.+.++..+++++++- |..+.-+.+.. ++...+
T Consensus 246 ~~~~~GI~~al~~f~l~~~~~~~~~~~~~~~~~~~~~~~ 284 (413)
T PLN02382 246 ERCAAGIIQAIGHFNLGPNVSPRDVSDFLYGKLDNVNPA 284 (413)
T ss_pred CCCccHHHHHHHHhCCCCCCChhhcccccccccccCCcH
Confidence 55668888888888875 55665555553 444443
No 240
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=55.31 E-value=8.2 Score=33.96 Aligned_cols=55 Identities=11% Similarity=0.059 Sum_probs=37.8
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCc----cchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhh
Q 022360 206 KPSELAIEKALKIASINPQRTLFFEDSV----RNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW 276 (298)
Q Consensus 206 kp~~~~~~~~l~~l~i~p~~~i~iGDs~----~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~ 276 (298)
=.|.-.++++.+.. -+++++|||.. ||.+.....+...+ .+.+.+|-...|++++
T Consensus 161 wDKty~Lr~l~~~~---~~~I~FfGDkt~pGGNDyei~~~~rt~g~-------------~V~~p~DT~~~l~~l~ 219 (220)
T PF03332_consen 161 WDKTYCLRHLEDEG---FDEIHFFGDKTFPGGNDYEIFEDPRTIGH-------------TVTSPEDTIKQLKELF 219 (220)
T ss_dssp -SGGGGGGGTTTTT----SEEEEEESS-STTSTTHHHHHSTTSEEE-------------E-SSHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhcc---cceEEEEehhccCCCCCceeeecCCccEE-------------EeCCHHHHHHHHHHHh
Confidence 44555555554322 58999999987 99999998888777 6677777777777664
No 241
>PRK10444 UMP phosphatase; Provisional
Probab=55.24 E-value=38 Score=30.22 Aligned_cols=48 Identities=13% Similarity=0.038 Sum_probs=32.1
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHH---HHHHHhCCCCccceeEee
Q 022360 98 LKPDPVLRSLLLSL---PLRKIIFTNADKVHAV---KVLSRLGLEDCFEGIICF 145 (298)
Q Consensus 98 ~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~---~~l~~l~l~~~f~~i~~~ 145 (298)
..+.|++.++|+.| +.+++++||....... ..++.+|+.---+.++++
T Consensus 16 ~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts 69 (248)
T PRK10444 16 NVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTS 69 (248)
T ss_pred CeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecH
Confidence 36789999998876 4789999997665444 444556764334555554
No 242
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=52.39 E-value=19 Score=33.64 Aligned_cols=22 Identities=27% Similarity=0.327 Sum_probs=17.3
Q ss_pred cEEEEeCCCCccCCCccHHHHH
Q 022360 15 DCLLFDLDDTLYPYSSGIAAAC 36 (298)
Q Consensus 15 k~viFDlDGTL~d~~~~~~~~~ 36 (298)
=++.||+||+|+.....+..+.
T Consensus 36 fgfafDIDGVL~RG~~~i~~~~ 57 (389)
T KOG1618|consen 36 FGFAFDIDGVLFRGHRPIPGAL 57 (389)
T ss_pred eeEEEecccEEEecCCCCcchH
Confidence 3799999999999777665543
No 243
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=50.28 E-value=60 Score=34.34 Aligned_cols=39 Identities=18% Similarity=0.162 Sum_probs=30.4
Q ss_pred EEEEcCCccchHHHHHcCCeEEEe-cCCC-CCCCCCEEeCC
Q 022360 226 TLFFEDSVRNIQAGKRVGLDTVLI-GKSQ-RVKGADYAFES 264 (298)
Q Consensus 226 ~i~iGDs~~Di~~a~~aG~~~v~v-~~~~-~~~~ad~i~~s 264 (298)
+.+.||+.||-.+.+.+-++++|. +.+. .+..||.++-+
T Consensus 708 VaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLD 748 (1019)
T KOG0203|consen 708 VAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLD 748 (1019)
T ss_pred EEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEec
Confidence 557899999999999999999994 4433 46777776543
No 244
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=49.87 E-value=1.9e+02 Score=25.91 Aligned_cols=46 Identities=20% Similarity=0.283 Sum_probs=37.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCc--cchHHHHHcCCeEEEecCCC
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSV--RNIQAGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~--~Di~~a~~aG~~~v~v~~~~ 253 (298)
..|-|..-+.+++..|+ .||.|||.. .+-....+.|++.+.+....
T Consensus 72 a~PGP~~ARE~l~~~~i---P~IvI~D~p~~K~~d~l~~~g~GYIivk~Dp 119 (277)
T PRK00994 72 AAPGPKKAREILKAAGI---PCIVIGDAPGKKVKDAMEEQGLGYIIVKADP 119 (277)
T ss_pred CCCCchHHHHHHHhcCC---CEEEEcCCCccchHHHHHhcCCcEEEEecCc
Confidence 46667888888888888 499999998 56788999999998885543
No 245
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=49.55 E-value=13 Score=26.07 Aligned_cols=27 Identities=19% Similarity=0.342 Sum_probs=23.2
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCccchHHHHH
Q 022360 211 AIEKALKIASINPQRTLFFEDSVRNIQAGKR 241 (298)
Q Consensus 211 ~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~ 241 (298)
-.+.+++++|+ ++++||...||++.+.
T Consensus 6 DVqQlLK~~G~----ivyfg~r~~~iemm~~ 32 (68)
T COG4483 6 DVQQLLKKFGI----IVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHHCCe----eeecCCHHHHHHHHHH
Confidence 36788899998 8999999999998863
No 246
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=49.50 E-value=27 Score=31.27 Aligned_cols=49 Identities=22% Similarity=0.176 Sum_probs=35.3
Q ss_pred hcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCc
Q 022360 90 HGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDC 138 (298)
Q Consensus 90 ~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~ 138 (298)
++.+....-...+...+.|+.+ +++++++|+.....+...++.+++..+
T Consensus 12 DGTLl~~~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~ 63 (273)
T PRK00192 12 DGTLLDHHTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDP 63 (273)
T ss_pred cccCcCCCCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Confidence 3444432334456677777775 478999999999999999999998654
No 247
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=46.86 E-value=46 Score=29.70 Aligned_cols=47 Identities=19% Similarity=0.230 Sum_probs=31.2
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChH---HHHHHHHHhCCCCccceeEeec
Q 022360 100 PDPVLRSLLLSL---PLRKIIFTNADKV---HAVKVLSRLGLEDCFEGIICFE 146 (298)
Q Consensus 100 ~~~g~~~~L~~l---~~~~~ivS~~~~~---~~~~~l~~l~l~~~f~~i~~~~ 146 (298)
+.|++.++|+.+ +.+++++||.... .....++.+|+.--.+.++++.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts~ 74 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTPA 74 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHH
Confidence 456777776665 5889999985544 4566677778754445666653
No 248
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=46.84 E-value=22 Score=31.11 Aligned_cols=25 Identities=20% Similarity=0.272 Sum_probs=12.8
Q ss_pred EEeCCCCccCCCc-----cHHHHHHHHHHH
Q 022360 18 LFDLDDTLYPYSS-----GIAAACGQNIKD 42 (298)
Q Consensus 18 iFDlDGTL~d~~~-----~~~~~~~~~~~~ 42 (298)
+||+||||.+... .........+..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~ 30 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRA 30 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHH
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHH
Confidence 6899999996543 344555555555
No 249
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=46.72 E-value=11 Score=36.48 Aligned_cols=29 Identities=14% Similarity=0.131 Sum_probs=20.0
Q ss_pred HcCCCCCc-EEEEcCCccchHHHHHcCCeE
Q 022360 218 IASINPQR-TLFFEDSVRNIQAGKRVGLDT 246 (298)
Q Consensus 218 ~l~i~p~~-~i~iGDs~~Di~~a~~aG~~~ 246 (298)
.+.+.+.. ..-||...+|+.+-+++|++.
T Consensus 488 slf~e~~PFyAGFGNriTDvisY~~vgIp~ 517 (580)
T COG5083 488 SLFIEFDPFYAGFGNRITDVISYSNVGIPK 517 (580)
T ss_pred HhhCcCChhhccccccchhheeeccccCCh
Confidence 34444444 337888888888888888773
No 250
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=43.72 E-value=1e+02 Score=32.58 Aligned_cols=37 Identities=19% Similarity=0.226 Sum_probs=29.6
Q ss_pred CCCChhHHHHHHhC----CCcEEEEeCCChHHHHHHHHHhC
Q 022360 98 LKPDPVLRSLLLSL----PLRKIIFTNADKVHAVKVLSRLG 134 (298)
Q Consensus 98 ~~~~~g~~~~L~~l----~~~~~ivS~~~~~~~~~~l~~l~ 134 (298)
..+.|++.++|+.| +..++|+|+.+...++..+...+
T Consensus 531 a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 531 LGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred CCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 34678999999988 35699999999998888886543
No 251
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=43.68 E-value=42 Score=30.09 Aligned_cols=63 Identities=19% Similarity=0.285 Sum_probs=46.1
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCc-----cchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhh
Q 022360 210 LAIEKALKIASINPQRTLFFEDSV-----RNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW 276 (298)
Q Consensus 210 ~~~~~~l~~l~i~p~~~i~iGDs~-----~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~ 276 (298)
+.=..++++++++ +++-=||. .=+++|++.|++.+++.++... ....++.+++++.++|.+.+
T Consensus 180 e~n~aL~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~-~~~~~~~~~~e~~~~l~~~~ 247 (248)
T PRK08057 180 ELERALLRQHRID---VVVTKNSGGAGTEAKLEAARELGIPVVMIARPALP-YADREFEDVAELVAWLRHLL 247 (248)
T ss_pred HHHHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCC-CCCcccCCHHHHHHHHHHhh
Confidence 4456677788873 55554444 3489999999999999988753 23367899999999988754
No 252
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=43.49 E-value=54 Score=29.04 Aligned_cols=56 Identities=14% Similarity=0.145 Sum_probs=37.4
Q ss_pred cccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCccceeEeec
Q 022360 91 GRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFE 146 (298)
Q Consensus 91 ~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~ 146 (298)
+.+........+...+.|+++ +.+++++|+.+...+...++.+++....+.+++.+
T Consensus 12 GTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~N 70 (270)
T PRK10513 12 GTLLLPDHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNN 70 (270)
T ss_pred CcCcCCCCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcC
Confidence 344333334556667777765 47899999999999999999998754323344443
No 253
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=42.26 E-value=41 Score=28.75 Aligned_cols=48 Identities=13% Similarity=0.021 Sum_probs=35.4
Q ss_pred hcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCC
Q 022360 90 HGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLED 137 (298)
Q Consensus 90 ~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~ 137 (298)
++.+........|...+.|+++ +.+++++|+.....+..+.+.+++..
T Consensus 9 DGTLl~~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~ 59 (215)
T TIGR01487 9 DGTLTEPNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG 59 (215)
T ss_pred CCCcCCCCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence 3444434445667777777776 47899999999999999999888764
No 254
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=41.09 E-value=47 Score=28.44 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=27.6
Q ss_pred HHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCC
Q 022360 104 LRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLE 136 (298)
Q Consensus 104 ~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~ 136 (298)
..+.|+.+ +++++++|+.+...+...++.+++.
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 55666654 5889999999999999999999986
No 255
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=40.40 E-value=44 Score=29.99 Aligned_cols=60 Identities=17% Similarity=0.276 Sum_probs=44.2
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCc-----cchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhH
Q 022360 210 LAIEKALKIASINPQRTLFFEDSV-----RNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIP 273 (298)
Q Consensus 210 ~~~~~~l~~l~i~p~~~i~iGDs~-----~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~ 273 (298)
+.=..++++++++ +++-=||. .=+++|++.|++++++.++.... ....+.+++++.++|+
T Consensus 184 e~n~al~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~~-~~~~~~~~~e~l~~l~ 248 (249)
T PF02571_consen 184 ELNRALFRQYGID---VLVTKESGGSGFDEKIEAARELGIPVIVIKRPPEPY-GDPVVETIEELLDWLE 248 (249)
T ss_pred HHHHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCCC-CCcccCCHHHHHHHHh
Confidence 4556677888873 66655554 33899999999999999887543 3334789999988875
No 256
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=38.76 E-value=52 Score=28.23 Aligned_cols=48 Identities=10% Similarity=0.021 Sum_probs=34.7
Q ss_pred cccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCc
Q 022360 91 GRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDC 138 (298)
Q Consensus 91 ~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~ 138 (298)
+.+........|...+.|+++ +.+++++|+.+...+...++.+++..+
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 62 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGP 62 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCc
Confidence 344333334556777777775 478999999999999988888887643
No 257
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=36.96 E-value=74 Score=22.99 Aligned_cols=40 Identities=10% Similarity=0.120 Sum_probs=34.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCC
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGL 244 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~ 244 (298)
..|=...++.++|.+++++..+..|-+..-.|..++.+|-
T Consensus 25 ~aPftAvlkfaAEeFkv~~~TsAiiTndGvGINP~qtAGn 64 (82)
T cd01766 25 STPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGN 64 (82)
T ss_pred cCchHHHHHHHHHhcCCCccceeEEecCccccChhhcccc
Confidence 5677899999999999999988888877778888888773
No 258
>PRK02228 V-type ATP synthase subunit F; Provisional
Probab=35.63 E-value=87 Score=23.77 Aligned_cols=24 Identities=8% Similarity=0.004 Sum_probs=19.8
Q ss_pred cEEEEcCCccchHHHHHcCCeEEEe
Q 022360 225 RTLFFEDSVRNIQAGKRVGLDTVLI 249 (298)
Q Consensus 225 ~~i~iGDs~~Di~~a~~aG~~~v~v 249 (298)
++.+||| ..-+..++.+|+..+.+
T Consensus 2 kIaVIGD-~dtv~GFrLaGi~~~~~ 25 (100)
T PRK02228 2 EIAVIGS-PEFTTGFRLAGIRKVYE 25 (100)
T ss_pred EEEEEeC-HHHHHHHHHcCCceEEe
Confidence 4678999 77899999999986653
No 259
>cd06831 PLPDE_III_ODC_like_AZI Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase-like Antizyme Inhibitor. Antizyme inhibitor (AZI) is homologous to the fold type III PLP-dependent enzyme ODC but does not retain any decarboxylase activity. Like ODC, AZI is presumed to exist as a homodimer. Antizyme is a regulatory protein that binds directly to the ODC monomer to block its active site, leading to its degradation by the 26S proteasome. AZI binds to Antizyme with a higher affinity than ODC, preventing the formation of the Antizyme-ODC complex. Thus, AZI blocks the ability of Antizyme to promote ODC degradation, which leads to increased ODC enzymatic activity and polyamine levels. AZI also prevents the degradation of other proteins regulated by Antizyme, such as cyclin D1.
Probab=34.49 E-value=91 Score=29.86 Aligned_cols=44 Identities=11% Similarity=0.312 Sum_probs=35.8
Q ss_pred HHcCCCCCcEEEEcCCc--cchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhH
Q 022360 217 KIASINPQRTLFFEDSV--RNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIP 273 (298)
Q Consensus 217 ~~l~i~p~~~i~iGDs~--~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~ 273 (298)
.+.|++|+++++-|-.. .+++.|.+.|+..+ .++|+++|..+.+
T Consensus 74 l~~G~~~~~Iif~gp~K~~~~l~~a~~~Gv~~i-------------~vDS~~El~~i~~ 119 (394)
T cd06831 74 QELGVSPENIIYTNPCKQASQIKYAAKVGVNIM-------------TCDNEIELKKIAR 119 (394)
T ss_pred HhcCCCcCCEEEeCCCCCHHHHHHHHHCCCCEE-------------EECCHHHHHHHHH
Confidence 35799999999998876 78999999998776 7788888877543
No 260
>PF01990 ATP-synt_F: ATP synthase (F/14-kDa) subunit; InterPro: IPR008218 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. The V-ATPases (or V1V0-ATPase) and A-ATPases (or A1A0-ATPase) are each composed of two linked complexes: the V1 or A1 complex contains the catalytic core that hydrolyses/synthesizes ATP, and the V0 or A0 complex that forms the membrane-spanning pore. The V- and A-ATPases both contain rotary motors, one that drives proton translocation across the membrane and one that drives ATP synthesis/hydrolysis [, , ]. The V- and A-ATPases more closely resemble one another in subunit structure than they do the F-ATPases, although the function of A-ATPases is closer to that of F-ATPases. This entry represents subunit F found in the V1 complex of V-ATPases (both eukaryotic and bacterial), as well as in the A1 complex of A-ATPases. Subunit F is a 16 kDa protein that is required for the assembly and activity of V-ATPase, and has a potential role in the differential targeting and regulation of the enzyme for specific organelles. This subunit is not necessary for the rotation of the ATPase V1 rotor, but it does promote catalysis []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0046933 hydrogen ion transporting ATP synthase activity, rotational mechanism, 0046961 proton-transporting ATPase activity, rotational mechanism, 0015991 ATP hydrolysis coupled proton transport, 0033178 proton-transporting two-sector ATPase complex, catalytic domain; PDB: 2D00_E 3A5C_P 3J0J_H 3A5D_H 2OV6_A 2QAI_B 3AON_B 2I4R_A.
Probab=34.30 E-value=68 Score=23.88 Aligned_cols=24 Identities=13% Similarity=0.245 Sum_probs=19.1
Q ss_pred EEEEcCCccchHHHHHcCCeEEEec
Q 022360 226 TLFFEDSVRNIQAGKRVGLDTVLIG 250 (298)
Q Consensus 226 ~i~iGDs~~Di~~a~~aG~~~v~v~ 250 (298)
+.+|||. .-+.+++-+|+..+.+.
T Consensus 1 IavIGd~-~~v~gFrLaGv~~~~~~ 24 (95)
T PF01990_consen 1 IAVIGDR-DTVLGFRLAGVEGVYVN 24 (95)
T ss_dssp EEEEE-H-HHHHHHHHTTSEEEEES
T ss_pred CEEEeCH-HHHHHHHHcCCCCccCC
Confidence 4688998 77889999999999665
No 261
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=33.84 E-value=73 Score=27.97 Aligned_cols=46 Identities=22% Similarity=0.361 Sum_probs=33.4
Q ss_pred cccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCC
Q 022360 91 GRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLE 136 (298)
Q Consensus 91 ~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~ 136 (298)
+.+........+...+.|+++ +.+++++|+.....+...++.+++.
T Consensus 8 GTLl~~~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 8 GTLLNDDHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred CCCCCCCCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 334333334556677777765 5789999999999999999988875
No 262
>PRK13789 phosphoribosylamine--glycine ligase; Provisional
Probab=33.40 E-value=4.5e+02 Score=25.38 Aligned_cols=66 Identities=14% Similarity=0.029 Sum_probs=45.6
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccch-HHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhh
Q 022360 210 LAIEKALKIASINPQRTLFFEDSVRNI-QAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELW 276 (298)
Q Consensus 210 ~~~~~~l~~l~i~p~~~i~iGDs~~Di-~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~ 276 (298)
...+.+++++|++-.+...+-| ..++ ..++..|.+.+.=+.+.....--.++.+.+++.+.+.+++
T Consensus 110 ~~~K~~l~~~gIpt~~~~~~~~-~~ea~~~~~~~~~PvVVKp~~~~~gkGV~vv~~~eel~~a~~~~~ 176 (426)
T PRK13789 110 HFAKSLMKEAKIPTASYKTFTE-YSSSLSYLESEMLPIVIKADGLAAGKGVTVATEKKMAKRALKEIF 176 (426)
T ss_pred HHHHHHHHHcCCCCCCeEeeCC-HHHHHHHHHhcCCCEEEEeCCCCCCCcEEEECCHHHHHHHHHHHH
Confidence 5677788999997656566643 3333 3455678887755555444455678899999999998876
No 263
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=33.29 E-value=71 Score=29.56 Aligned_cols=40 Identities=15% Similarity=0.230 Sum_probs=31.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCc
Q 022360 99 KPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDC 138 (298)
Q Consensus 99 ~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~ 138 (298)
...+.+.+.|++| +++++++|+.....+..+.+.+++..+
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 3445566666665 588999999999999999999998653
No 264
>COG0019 LysA Diaminopimelate decarboxylase [Amino acid transport and metabolism]
Probab=32.92 E-value=75 Score=30.56 Aligned_cols=48 Identities=21% Similarity=0.353 Sum_probs=37.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCCc--cchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhH
Q 022360 212 IEKALKIASINPQRTLFFEDSV--RNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIP 273 (298)
Q Consensus 212 ~~~~l~~l~i~p~~~i~iGDs~--~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~ 273 (298)
++.+++ .|.+|+++++-|... .+|..|.+.|+..+ .++|+++|..+-+
T Consensus 86 l~~al~-aG~~~~~I~f~g~~ks~~ei~~a~e~gi~~i-------------~vdS~~El~~l~~ 135 (394)
T COG0019 86 LELALA-AGFPPERIVFSGPAKSEEEIAFALELGIKLI-------------NVDSEEELERLSA 135 (394)
T ss_pred HHHHHH-cCCChhhEEECCCCCCHHHHHHHHHcCCcEE-------------EeCCHHHHHHHHH
Confidence 334433 399999999999987 68999999998877 8899999876443
No 265
>PF02784 Orn_Arg_deC_N: Pyridoxal-dependent decarboxylase, pyridoxal binding domain; InterPro: IPR022644 These enzymes are collectively known as group IV decarboxylases []. Pyridoxal-dependent decarboxylases acting on ornithine, lysine, arginine and related substrates can be classified into two different families on the basis of sequence similarities [, ]. Members of this family while most probably evolutionary related, do not share extensive regions of sequence similarities. The proteins contain a conserved lysine residue which is known, in mouse ODC [], to be the site of attachment of the pyridoxal-phosphate group. The proteins also contain a stretch of three consecutive glycine residues and has been proposed to be part of a substrate- binding region [].; GO: 0003824 catalytic activity; PDB: 2OO0_A 2ON3_A 1D7K_B 3VAB_A 2J66_A 3C5Q_A 2QGH_A 1TWI_B 1TUF_A 3N2O_A ....
Probab=32.74 E-value=86 Score=27.65 Aligned_cols=44 Identities=16% Similarity=0.326 Sum_probs=35.7
Q ss_pred HHcCCCCCcEEEEcCCc--cchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhH
Q 022360 217 KIASINPQRTLFFEDSV--RNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIP 273 (298)
Q Consensus 217 ~~l~i~p~~~i~iGDs~--~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~ 273 (298)
.+.|++|+++++-|-.. .+|+.|...|...+ +++|+++|..+.+
T Consensus 58 ~~~g~~~~~Ii~~gp~k~~~~l~~a~~~~~~~i-------------~vDs~~el~~l~~ 103 (251)
T PF02784_consen 58 LKAGFPPDRIIFTGPGKSDEELEEAIENGVATI-------------NVDSLEELERLAE 103 (251)
T ss_dssp HHTTTTGGGEEEECSS--HHHHHHHHHHTESEE-------------EESSHHHHHHHHH
T ss_pred HhhhccccceeEecCcccHHHHHHHHhCCceEE-------------EeCCHHHHHHHhc
Confidence 44899999999999976 68999998887777 8899999886544
No 266
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=32.54 E-value=57 Score=33.36 Aligned_cols=50 Identities=18% Similarity=0.290 Sum_probs=40.0
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCC-Cccce-eEeecC
Q 022360 98 LKPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLE-DCFEG-IICFET 147 (298)
Q Consensus 98 ~~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~-~~f~~-i~~~~~ 147 (298)
+++.|++.++|+++. +.+.|+|-+...+++.+++.+.-. .||.. |++.++
T Consensus 200 vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde 253 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDE 253 (635)
T ss_pred EEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHHHhCCCCccccceEEEecC
Confidence 577899999999997 678999999999999999988653 46654 555543
No 267
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=31.94 E-value=27 Score=33.38 Aligned_cols=18 Identities=33% Similarity=0.445 Sum_probs=15.2
Q ss_pred CccEEEEeCCCCccCCCc
Q 022360 13 KYDCLLFDLDDTLYPYSS 30 (298)
Q Consensus 13 ~~k~viFDlDGTL~d~~~ 30 (298)
.-|.+.||+||||+++..
T Consensus 74 ~~K~i~FD~dgtlI~t~s 91 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKS 91 (422)
T ss_pred CcceEEEecCCceeecCC
Confidence 457999999999998664
No 268
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=31.92 E-value=1.1e+02 Score=26.06 Aligned_cols=47 Identities=15% Similarity=0.142 Sum_probs=33.2
Q ss_pred cccCCCCCCCChhHHHHHHh---CCCcEEEEeCCChHHHHHHHHHhCCCC
Q 022360 91 GRLPYENLKPDPVLRSLLLS---LPLRKIIFTNADKVHAVKVLSRLGLED 137 (298)
Q Consensus 91 ~~~~~~~~~~~~g~~~~L~~---l~~~~~ivS~~~~~~~~~~l~~l~l~~ 137 (298)
+.+....-...+...+.|++ .+++++++|+.+...+..+++.+++..
T Consensus 7 GTLl~~~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~ 56 (225)
T TIGR01482 7 GTLTDPNRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD 56 (225)
T ss_pred CccCCCCcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 33433333445666677777 568899999999998998988888543
No 269
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=31.39 E-value=1.6e+02 Score=27.78 Aligned_cols=37 Identities=8% Similarity=-0.073 Sum_probs=26.9
Q ss_pred CCCChhHHHHHHhC---C-CcEEEEeCCChHHHHHHHHHhC
Q 022360 98 LKPDPVLRSLLLSL---P-LRKIIFTNADKVHAVKVLSRLG 134 (298)
Q Consensus 98 ~~~~~g~~~~L~~l---~-~~~~ivS~~~~~~~~~~l~~l~ 134 (298)
-+++||+..+++.+ + ..++-+||++-+....+.+.++
T Consensus 195 r~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~ 235 (373)
T COG4850 195 RQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFIT 235 (373)
T ss_pred cCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHh
Confidence 36678888777765 3 5788999998887766666554
No 270
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=30.88 E-value=78 Score=27.95 Aligned_cols=48 Identities=23% Similarity=0.337 Sum_probs=37.5
Q ss_pred hcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCC
Q 022360 90 HGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLED 137 (298)
Q Consensus 90 ~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~ 137 (298)
++.+........+...+.|+.+ +.+++++|+.+...+..+++.+++..
T Consensus 11 DGTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 11 DGTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred CCCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 4444444455677788888755 58899999999999999999999876
No 271
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=30.84 E-value=80 Score=28.03 Aligned_cols=49 Identities=18% Similarity=0.172 Sum_probs=35.4
Q ss_pred hcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCCc
Q 022360 90 HGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLEDC 138 (298)
Q Consensus 90 ~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~~ 138 (298)
++.+........+...+.|+++ +.+++++|+.+...+...++.+++..+
T Consensus 10 DGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 61 (272)
T PRK15126 10 DGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAY 61 (272)
T ss_pred CCcCcCCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCc
Confidence 3444433344566677777776 478899999999999999999987643
No 272
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=29.45 E-value=87 Score=26.60 Aligned_cols=46 Identities=24% Similarity=0.303 Sum_probs=34.5
Q ss_pred cccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCC
Q 022360 91 GRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLE 136 (298)
Q Consensus 91 ~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~ 136 (298)
+.+......+.|...+.|+.+ +.+++++|+.....+..++..+++.
T Consensus 7 GTLl~~~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 7 GTLLNSDGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp TTTCSTTSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred CceecCCCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 334334444667777777765 5889999999999999999988876
No 273
>PRK01395 V-type ATP synthase subunit F; Provisional
Probab=29.18 E-value=1.2e+02 Score=23.26 Aligned_cols=28 Identities=21% Similarity=0.198 Sum_probs=23.1
Q ss_pred cEEEEcCCccchHHHHHcCCeEEEecCCC
Q 022360 225 RTLFFEDSVRNIQAGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 225 ~~i~iGDs~~Di~~a~~aG~~~v~v~~~~ 253 (298)
++.+||| ..-+..++.+|+..+.+....
T Consensus 5 kIaVIGD-~dtv~GFrLaGi~~~~v~~~e 32 (104)
T PRK01395 5 KIGVVGD-KDSILPFKALGIDVFPVIDEQ 32 (104)
T ss_pred eEEEEEC-HHHHHHHHHcCCeeEEecChH
Confidence 5889999 888999999999887765543
No 274
>PRK10976 putative hydrolase; Provisional
Probab=28.83 E-value=89 Score=27.57 Aligned_cols=48 Identities=17% Similarity=0.214 Sum_probs=34.3
Q ss_pred hcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCC
Q 022360 90 HGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLED 137 (298)
Q Consensus 90 ~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~ 137 (298)
++.+........+...+.|+++ +.+++++|+.....+...++.+++..
T Consensus 10 DGTLl~~~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (266)
T PRK10976 10 DGTLLSPDHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKS 60 (266)
T ss_pred CCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 3444433334556677777766 47899999999998989999888764
No 275
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=28.23 E-value=2.4e+02 Score=25.84 Aligned_cols=20 Identities=20% Similarity=0.097 Sum_probs=15.7
Q ss_pred CCCcEEEEcCCccchHHHHH
Q 022360 222 NPQRTLFFEDSVRNIQAGKR 241 (298)
Q Consensus 222 ~p~~~i~iGDs~~Di~~a~~ 241 (298)
..-.++.|||+-|.+-|.+-
T Consensus 174 ~gi~tigIGDGGNEiGMG~v 193 (291)
T PF14336_consen 174 PGIPTIGIGDGGNEIGMGNV 193 (291)
T ss_pred CCCCEEEECCCchhcccChH
Confidence 44469999999998877655
No 276
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=27.78 E-value=2.2e+02 Score=25.77 Aligned_cols=60 Identities=17% Similarity=0.296 Sum_probs=40.6
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccc------hHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHh
Q 022360 210 LAIEKALKIASINPQRTLFFEDSVRN------IQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPEL 275 (298)
Q Consensus 210 ~~~~~~l~~l~i~p~~~i~iGDs~~D------i~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~ 275 (298)
+.=..+++++++ +++.-=||-.. +++|++.|+.++++.++ ....-++.++.++.+.|.++
T Consensus 186 ~~n~all~q~~i---d~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~Rp---~~~~~~~~~v~~~~~~l~~~ 251 (257)
T COG2099 186 EDNKALLEQYRI---DVVVTKNSGGAGGTYEKIEAARELGIPVIMIERP---IDYPAGFGDVTDLDAALAQL 251 (257)
T ss_pred HHHHHHHHHhCC---CEEEEccCCcccCcHHHHHHHHHcCCcEEEEecC---CcCCcccchhhHHHHHHHHH
Confidence 344556677777 36666666544 99999999999999888 22223456667766666554
No 277
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=27.76 E-value=5.7e+02 Score=28.03 Aligned_cols=68 Identities=9% Similarity=-0.023 Sum_probs=46.7
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360 210 LAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWE 277 (298)
Q Consensus 210 ~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~ 277 (298)
..+..+++++|++--....+.+...-...+...|.+.+.=+........-.++.+.++|...+.+.+.
T Consensus 671 ~~~~~~L~~~GIp~P~~~~~~s~ee~~~~~~~igyPvvVKP~~~~Gg~Gv~iv~~~eeL~~~~~~a~~ 738 (1066)
T PRK05294 671 ERFSKLLEKLGIPQPPNGTATSVEEALEVAEEIGYPVLVRPSYVLGGRAMEIVYDEEELERYMREAVK 738 (1066)
T ss_pred HHHHHHHHHcCcCCCCeEEECCHHHHHHHHHhcCCCeEEEeCCCCCCCcEEEECCHHHHHHHHHHHHh
Confidence 56788999999977677777654333445677788766533322333445688999999998887654
No 278
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=26.78 E-value=94 Score=27.35 Aligned_cols=48 Identities=21% Similarity=0.148 Sum_probs=34.0
Q ss_pred hcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCC
Q 022360 90 HGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLED 137 (298)
Q Consensus 90 ~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~ 137 (298)
++.+........|...+.|+++ +.+++++|+.....+...++.+++..
T Consensus 11 DGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (272)
T PRK10530 11 DGTLLTPKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDT 61 (272)
T ss_pred CCceECCCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 3444433334556667777765 47889999999998899999888753
No 279
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=26.72 E-value=1.1e+02 Score=26.62 Aligned_cols=38 Identities=16% Similarity=0.164 Sum_probs=29.9
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCCC
Q 022360 100 PDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLED 137 (298)
Q Consensus 100 ~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~~ 137 (298)
..+...+.|+++ +++++++|+.....+...++.+++..
T Consensus 16 ~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 16 EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 345667777665 57899999999998999999999754
No 280
>PF01071 GARS_A: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; InterPro: IPR020561 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: ATP + 5-phosphoribosylamine + glycine = ADP + Pi + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART. This entry represents the A-domain of the enzyme, and is related to the ATP-grasp domain of biotin carboxylase/carbamoyl phosphate synthetase.; PDB: 1GSO_A 3LP8_A 2IP4_A 1VKZ_A 2QK4_A 2XD4_A 2XCL_A 3MJF_A 2YRW_A 2YS6_A ....
Probab=26.46 E-value=3.9e+02 Score=23.04 Aligned_cols=68 Identities=13% Similarity=0.091 Sum_probs=50.1
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeE-EEecCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360 210 LAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDT-VLIGKSQRVKGADYAFESIHNIKEAIPELWE 277 (298)
Q Consensus 210 ~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~-v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~ 277 (298)
..-+.+++++|++-.+.-.|-|-..-.+-.+..+... |.=+.+....+--+++.+.++..+.+++++.
T Consensus 4 ~faK~fm~~~~IPTa~~~~f~~~~~A~~~l~~~~~p~~ViKadGla~GKGV~i~~~~~eA~~~l~~~~~ 72 (194)
T PF01071_consen 4 SFAKEFMKRYGIPTAKYKVFTDYEEALEYLEEQGYPYVVIKADGLAAGKGVVIADDREEALEALREIFV 72 (194)
T ss_dssp HHHHHHHHHTT-SB--EEEESSHHHHHHHHHHHSSSEEEEEESSSCTTTSEEEESSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCeeEECCHHHHHHHHHhcCCCceEEccCCCCCCCEEEEeCCHHHHHHHHHHhcc
Confidence 4567889999998878888877555566667778877 4446676666677888999999999999985
No 281
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=26.29 E-value=1.5e+02 Score=26.42 Aligned_cols=47 Identities=17% Similarity=0.174 Sum_probs=33.5
Q ss_pred hcccCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCC
Q 022360 90 HGRLPYENLKPDPVLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLE 136 (298)
Q Consensus 90 ~~~~~~~~~~~~~g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~ 136 (298)
++.+........+...+.|+++ +++++++|+.+...+...++.++++
T Consensus 15 DGTLL~~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 15 DGTLLDSHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred ccCCcCCCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 3444433333445566666665 5889999999999999999999875
No 282
>cd06836 PLPDE_III_ODC_DapDC_like_1 Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Uncharacterized Proteins with similarity to Ornithine and Diaminopimelate Decarboxylases. This subfamily contains uncharacterized proteins with similarity to ornithine decarboxylase (ODC) and diaminopimelate decarboxylase (DapDC). ODC and DapDC are fold type III PLP-dependent enzymes that contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. ODC participates in the formation of putrescine by catalyzing the decarboxylation of ornithine, the first step in polyamine biosynthesis. DapDC participates in the last step of lysine biosynthesis, the conversion of meso-2,6-diaminoheptanedioate to L-lysine. Proteins in this subfamily may function as PLP-dependent decarbo
Probab=26.15 E-value=1.6e+02 Score=27.83 Aligned_cols=43 Identities=12% Similarity=0.322 Sum_probs=35.1
Q ss_pred HHcCCCCCcEEEEcCCc--cchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhH
Q 022360 217 KIASINPQRTLFFEDSV--RNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIP 273 (298)
Q Consensus 217 ~~l~i~p~~~i~iGDs~--~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~ 273 (298)
...|++|+++++-|-.. .+++.|.+.|+ .+ .++|+++|..+.+
T Consensus 65 l~~G~~~~~Ii~~gp~K~~~~L~~ai~~gv-~i-------------~iDS~~El~~i~~ 109 (379)
T cd06836 65 LAAGFPPERIVFDSPAKTRAELREALELGV-AI-------------NIDNFQELERIDA 109 (379)
T ss_pred HHcCCChhhEEEeCCCCCHHHHHHHHHCCC-EE-------------EECCHHHHHHHHH
Confidence 35899999999989887 68999999887 45 7899999876554
No 283
>smart00455 RBD Raf-like Ras-binding domain.
Probab=25.19 E-value=66 Score=22.77 Aligned_cols=25 Identities=32% Similarity=0.325 Sum_probs=22.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEE
Q 022360 205 CKPSELAIEKALKIASINPQRTLFF 229 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~i 229 (298)
+++-.+++..++++.|++|+.+..+
T Consensus 19 g~tl~e~L~~~~~kr~l~~~~~~v~ 43 (70)
T smart00455 19 GKTVRDALAKALKKRGLNPECCVVR 43 (70)
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEE
Confidence 5777899999999999999998766
No 284
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=25.06 E-value=82 Score=26.35 Aligned_cols=30 Identities=13% Similarity=0.102 Sum_probs=20.7
Q ss_pred cCccEEEEeCCCCccCCC-ccHHHHHHHHHH
Q 022360 12 AKYDCLLFDLDDTLYPYS-SGIAAACGQNIK 41 (298)
Q Consensus 12 ~~~k~viFDlDGTL~d~~-~~~~~~~~~~~~ 41 (298)
+.+|+|+||=|++|.--+ ..+++...+-++
T Consensus 41 ~~ikavVlDKDNcit~P~~~~Iwp~~l~~ie 71 (190)
T KOG2961|consen 41 KGIKAVVLDKDNCITAPYSLAIWPPLLPSIE 71 (190)
T ss_pred cCceEEEEcCCCeeeCCcccccCchhHHHHH
Confidence 468999999999998433 455555544333
No 285
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=24.51 E-value=2.1e+02 Score=27.10 Aligned_cols=68 Identities=16% Similarity=0.129 Sum_probs=47.6
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcC--CeEEEecCCCCCCCCCEEeCCHHHHH---HHhHHhhcc
Q 022360 210 LAIEKALKIASINPQRTLFFEDSVRNIQAGKRVG--LDTVLIGKSQRVKGADYAFESIHNIK---EAIPELWES 278 (298)
Q Consensus 210 ~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG--~~~v~v~~~~~~~~ad~i~~s~~~l~---~~l~~~~~~ 278 (298)
..+..++++.|++.+-.++=| +-+|-.++...| ++++.++.+..--...+-+-+++++. ++|..++..
T Consensus 273 ~~L~~~A~~~~Ip~Q~~v~~~-ggTDA~a~~~~g~gvpta~Igip~ry~Hs~~e~~~~~D~~~~~~Ll~~~i~~ 345 (355)
T COG1363 273 KFLLELAEKNNIPYQVDVSPG-GGTDAGAAHLTGGGVPTALIGIPTRYIHSPVEVAHLDDLEATVKLLVAYLES 345 (355)
T ss_pred HHHHHHHHHcCCCeEEEecCC-CCccHHHHHHcCCCCceEEEecccccccCcceeecHHHHHHHHHHHHHHHHh
Confidence 567777889999887666555 789999998886 77787777766555555666666655 455555443
No 286
>PF01993 MTD: methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase; InterPro: IPR002844 This archaeal enzyme family is involved in formation of methane from carbon dioxide 1.5.99.9 from EC. The enzyme requires coenzyme F420 [].; GO: 0008901 ferredoxin hydrogenase activity, 0015948 methanogenesis, 0055114 oxidation-reduction process; PDB: 1U6I_D 3IQF_G 1QV9_C 3IQE_F 1U6J_G 3IQZ_D 1U6K_B.
Probab=23.18 E-value=1.5e+02 Score=26.63 Aligned_cols=46 Identities=13% Similarity=0.245 Sum_probs=36.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCc--cchHHHHHcCCeEEEecCCC
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSV--RNIQAGKRVGLDTVLIGKSQ 253 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~--~Di~~a~~aG~~~v~v~~~~ 253 (298)
..|-|...+.++...++ .||+|||.. .+-....+.|++.+.+....
T Consensus 71 ~~PGP~~ARE~l~~~~i---P~IvI~D~p~~k~kd~l~~~g~GYIivk~Dp 118 (276)
T PF01993_consen 71 AAPGPTKAREMLSAKGI---PCIVISDAPTKKAKDALEEEGFGYIIVKADP 118 (276)
T ss_dssp TSHHHHHHHHHHHHSSS----EEEEEEGGGGGGHHHHHHTT-EEEEETTS-
T ss_pred CCCCcHHHHHHHHhCCC---CEEEEcCCCchhhHHHHHhcCCcEEEEecCc
Confidence 47778888988888887 499999998 56788889999999886554
No 287
>COG4071 Uncharacterized protein conserved in archaea [Function unknown]
Probab=23.11 E-value=1e+02 Score=27.06 Aligned_cols=46 Identities=17% Similarity=0.278 Sum_probs=32.8
Q ss_pred CchhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcc
Q 022360 179 PQIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVR 234 (298)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~ 234 (298)
.++-.++||++||.|.. | .+-..+.+..+.+++|.+- +++|+|+..
T Consensus 125 ~Dl~NVPGtya~plPen---p-----~~vA~el~~Ei~rr~GvDV--~v~v~DTDa 170 (278)
T COG4071 125 VDLTNVPGTYACPLPEN---P-----KKVAEELYKEIKRRLGVDV--VVMVADTDA 170 (278)
T ss_pred ccccCCCcceeccCCCC---h-----HHHHHHHHHHHHHHhCCce--EEEEecCch
Confidence 34556889999997761 1 1223467888999999954 889999874
No 288
>PRK03957 V-type ATP synthase subunit F; Provisional
Probab=23.02 E-value=1.9e+02 Score=21.97 Aligned_cols=22 Identities=18% Similarity=0.246 Sum_probs=17.9
Q ss_pred cEEEEcCCccchHHHHHcCCeEE
Q 022360 225 RTLFFEDSVRNIQAGKRVGLDTV 247 (298)
Q Consensus 225 ~~i~iGDs~~Di~~a~~aG~~~v 247 (298)
++.+||| ..-+..++-+|+..+
T Consensus 2 kIaVIgD-~dtv~GFrLaGi~~~ 23 (100)
T PRK03957 2 KIAVVGD-RDTVTGFRLAGLTEV 23 (100)
T ss_pred EEEEEeC-HHHHHHHHHcCCCce
Confidence 4678999 777899999999743
No 289
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=22.80 E-value=1.4e+02 Score=26.16 Aligned_cols=34 Identities=24% Similarity=0.231 Sum_probs=27.2
Q ss_pred hHHHHHHhC---CCcEEEEeCCChHHHHHHHHHhCCC
Q 022360 103 VLRSLLLSL---PLRKIIFTNADKVHAVKVLSRLGLE 136 (298)
Q Consensus 103 g~~~~L~~l---~~~~~ivS~~~~~~~~~~l~~l~l~ 136 (298)
...+.|+.+ +.+++++|+.....+...++.+++.
T Consensus 20 ~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 20 PAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 455666654 5789999999999999999999875
No 290
>PF08013 Tagatose_6_P_K: Tagatose 6 phosphate kinase; InterPro: IPR012062 Escherichia coli and other enteric bacteria contain two closely related D-tagatose 1,6-bisphosphate (TagBP)-specific aldolases involved in catabolism of galactitol (genes gatY gatZ) and of N-acetyl-galactosamine and D-galactosamine (genes kbaY, kbaZ, also called agaY, agaZ). The catalytic subunits GatY/KbaY alone are sufficient to show aldolase activity and contain most or all of the residues that have been identified as essential in substrate/product recognition and catalysis for class II aldolases [, ]. However, these aldolases differ from other Class II aldolases (which are homodimeric enzymes) in that they require subunits GatZ/KbaZ for full activity and for good in vivo and in vitro stability. The Z subunits alone do not show any aldolase activity []. It should be noted that the previous suggestion of a tagatose 6P-kinase function for AgaZ [] and other members of this family turned out to be erroneous [, ].; GO: 0019402 galactitol metabolic process; PDB: 2FIQ_A 3TXV_A.
Probab=22.75 E-value=1.8e+02 Score=28.32 Aligned_cols=92 Identities=14% Similarity=0.016 Sum_probs=49.1
Q ss_pred EEeCCChHHHHHHHHHhCCCC-ccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCCchhhhccccCCCCCCc
Q 022360 117 IFTNADKVHAVKVLSRLGLED-CFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGPQIFDIIGHFAQPNPSL 195 (298)
Q Consensus 117 ivS~~~~~~~~~~l~~l~l~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (298)
-+++..+..++..+++-.-.+ .+-..-+++.++..+|++-+..-++.
T Consensus 21 SVCsahp~VieAAl~~a~~~~~pvLiEAT~NQVnq~GGYTGmtP~dF~-------------------------------- 68 (424)
T PF08013_consen 21 SVCSAHPLVIEAALERAKEDDSPVLIEATSNQVNQFGGYTGMTPADFR-------------------------------- 68 (424)
T ss_dssp EE----HHHHHHHHHHCCCS-S-EEEEEETTTCSTT-TTTTB-HHHHH--------------------------------
T ss_pred EecCCCHHHHHHHHHHHHhcCCeEEEEeccccccccCCcCCCCHHHHH--------------------------------
Confidence 334555666777776543322 23334566777776665543333333
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc----cc--------------hHHHHHcCCeEEEecCCCC
Q 022360 196 VALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSV----RN--------------IQAGKRVGLDTVLIGKSQR 254 (298)
Q Consensus 196 ~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~----~D--------------i~~a~~aG~~~v~v~~~~~ 254 (298)
+....++++.|++.++++.-||.. |. |.+--.+|+..+++.++-.
T Consensus 69 --------------~~V~~iA~~~g~~~~~iiLGGDHLGP~~w~~lpaeeAM~~A~~li~ayv~AGF~KIHLD~Sm~ 131 (424)
T PF08013_consen 69 --------------DFVREIADEVGFPRDRIILGGDHLGPNPWQHLPAEEAMAKAKELIRAYVEAGFTKIHLDCSMD 131 (424)
T ss_dssp --------------HHHHHHHHHCT--GGGEEEEEEEESSCCCTTSBHHHHHHHHHHHHHHHHCTT--EEEE---C-
T ss_pred --------------HHHHHHHHHcCCchhhEEecCCCCCcccccCCCHHHHHHHHHHHHHHHHHcCCceEeecCCCC
Confidence 557888899999999999999986 21 2233457999999866543
No 291
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=21.72 E-value=2.2e+02 Score=27.22 Aligned_cols=49 Identities=12% Similarity=0.183 Sum_probs=40.2
Q ss_pred CCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHhCCCCccceeEeecC
Q 022360 99 KPDPVLRSLLLSLP--LRKIIFTNADKVHAVKVLSRLGLEDCFEGIICFET 147 (298)
Q Consensus 99 ~~~~g~~~~L~~l~--~~~~ivS~~~~~~~~~~l~~l~l~~~f~~i~~~~~ 147 (298)
.-.||+.-+|..+. +.++++|+...-.+.++++.++-..++..-+..+.
T Consensus 214 ~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~lDP~g~IsYkLfr~~ 264 (393)
T KOG2832|consen 214 KKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDALDPKGYISYKLFRGA 264 (393)
T ss_pred ccCchHHHHHHhhcccceEEEEecCCccchhhhHhhcCCcceEEEEEecCc
Confidence 35799999999997 67999999998989999999887777766665543
No 292
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=21.63 E-value=71 Score=30.59 Aligned_cols=20 Identities=30% Similarity=0.388 Sum_probs=16.5
Q ss_pred CccEEEEeCCCCccCCCccH
Q 022360 13 KYDCLLFDLDDTLYPYSSGI 32 (298)
Q Consensus 13 ~~k~viFDlDGTL~d~~~~~ 32 (298)
..++|.||=|+||+++...+
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl 165 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASL 165 (408)
T ss_pred CceEEEEcCCcccccCCCCC
Confidence 57999999999999765443
No 293
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=21.48 E-value=6.1e+02 Score=24.75 Aligned_cols=57 Identities=14% Similarity=0.222 Sum_probs=34.5
Q ss_pred EEEcCCccchHHHHHcCCeEEEecCCCCCCCCCEEeCCH-------HHHHHHhHHhhccCccccc
Q 022360 227 LFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGADYAFESI-------HNIKEAIPELWESDMKSEV 284 (298)
Q Consensus 227 i~iGDs~~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~-------~~l~~~l~~~~~~~~~~~~ 284 (298)
.+|.|+- |++-+.+-=+...+.++|...-.+||++-+- +++...|.+.-+.+.+++.
T Consensus 217 ~~vd~~~-d~~ia~~RI~~gk~~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFYG~n~~eS~ 280 (477)
T KOG2456|consen 217 CYVDKNC-DLKIAARRIAWGKWMNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFYGENPKESK 280 (477)
T ss_pred eeecCCc-CHHHHHHHHHHHhhccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHhCCCccccc
Confidence 4566665 6655444322333488899999999998773 3455555555555544443
No 294
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.42 E-value=1.5e+02 Score=23.79 Aligned_cols=38 Identities=18% Similarity=0.189 Sum_probs=32.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCc--cchHHHHHc
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSV--RNIQAGKRV 242 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~--~Di~~a~~a 242 (298)
+.|.......++++.|++.--+=+.|.+. .|++.++++
T Consensus 43 ~QP~~~~i~~aa~~aGl~y~~iPV~~~~iT~~dV~~f~~A 82 (130)
T COG3453 43 GQPGFAAIAAAAEAAGLTYTHIPVTGGGITEADVEAFQRA 82 (130)
T ss_pred CCCChHHHHHHHHhcCCceEEeecCCCCCCHHHHHHHHHH
Confidence 78889999999999999877677888887 788887765
No 295
>TIGR00877 purD phosphoribosylamine--glycine ligase. This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes.
Probab=21.32 E-value=7.1e+02 Score=23.60 Aligned_cols=67 Identities=13% Similarity=0.065 Sum_probs=44.6
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccch-HHHHHcCCe-EEEecCCCCCCCCCEEeCCHHHHHHHhHHhhc
Q 022360 210 LAIEKALKIASINPQRTLFFEDSVRNI-QAGKRVGLD-TVLIGKSQRVKGADYAFESIHNIKEAIPELWE 277 (298)
Q Consensus 210 ~~~~~~l~~l~i~p~~~i~iGDs~~Di-~~a~~aG~~-~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~ 277 (298)
...+.+++++|++......+.+ ..|+ +.+...|.+ .+.=+.......--.++.+.+++.+.+.++..
T Consensus 106 ~~~k~~l~~~gIp~p~~~~~~~-~~~~~~~~~~~g~P~~VvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~ 174 (423)
T TIGR00877 106 AFAKDFMKRYGIPTAEYEVFTD-PEEALSYIQEKGAPAIVVKADGLAAGKGVIVAKTNEEAIKAVEEILE 174 (423)
T ss_pred HHHHHHHHHCCCCCCCeEEECC-HHHHHHHHHhcCCCeEEEEECCCCCCCCEEEECCHHHHHHHHHHHHH
Confidence 5677888999998777766654 4443 445667887 55433333333345688999999888887754
No 296
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=21.02 E-value=1.4e+02 Score=27.66 Aligned_cols=38 Identities=13% Similarity=0.276 Sum_probs=29.5
Q ss_pred HHHHHHHHcC-CCCCcEEEEcCCccc-----hHHHHHcCCeEEEe
Q 022360 211 AIEKALKIAS-INPQRTLFFEDSVRN-----IQAGKRVGLDTVLI 249 (298)
Q Consensus 211 ~~~~~l~~l~-i~p~~~i~iGDs~~D-----i~~a~~aG~~~v~v 249 (298)
-+..+.|++| +..-.+.++||+ |+ +.++...|+....+
T Consensus 140 Dl~Ti~E~~g~l~g~k~a~vGDg-NNv~nSl~~~~a~~G~dv~ia 183 (310)
T COG0078 140 DLMTIKEHFGSLKGLKLAYVGDG-NNVANSLLLAAAKLGMDVRIA 183 (310)
T ss_pred HHHHHHHhcCcccCcEEEEEcCc-chHHHHHHHHHHHhCCeEEEE
Confidence 3566778888 688899999999 55 56777889987665
No 297
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=20.61 E-value=4.7e+02 Score=23.73 Aligned_cols=46 Identities=13% Similarity=0.236 Sum_probs=38.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCc---cchHHHHHcCCeEEEecCCCC
Q 022360 205 CKPSELAIEKALKIASINPQRTLFFEDSV---RNIQAGKRVGLDTVLIGKSQR 254 (298)
Q Consensus 205 ~kp~~~~~~~~l~~l~i~p~~~i~iGDs~---~Di~~a~~aG~~~v~v~~~~~ 254 (298)
+-.++..++.++++..+ -+++|-+. .|+..|.+.|...++++.+-.
T Consensus 174 Gl~n~~~l~~i~e~~~v----pVivdAGIgt~sDa~~AmElGaDgVL~nSaIa 222 (267)
T CHL00162 174 GLQNLLNLQIIIENAKI----PVIIDAGIGTPSEASQAMELGASGVLLNTAVA 222 (267)
T ss_pred CCCCHHHHHHHHHcCCC----cEEEeCCcCCHHHHHHHHHcCCCEEeecceee
Confidence 56778999999997665 35677665 899999999999999988775
No 298
>PF02786 CPSase_L_D2: Carbamoyl-phosphate synthase L chain, ATP binding domain; InterPro: IPR005479 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the ATP-binding domain found in the large subunit of carbamoyl phosphate synthase, as well as in related proteins.; GO: 0003824 catalytic activity, 0005524 ATP binding, 0008152 metabolic process; PDB: 3U9S_A 3U9T_A 2C00_B 2VQD_A 1W96_B 1W93_A 1M6V_C 1CS0_C 1C30_E 1C3O_G ....
Probab=20.51 E-value=2e+02 Score=24.97 Aligned_cols=85 Identities=12% Similarity=0.095 Sum_probs=49.1
Q ss_pred HHHHHHHHHcCCCCCcEEEE-cCCc-cchHHHHHcCCeEEEecCCCCCCCCCEEeCCHHHHHHHhHHhhccCcccccCCC
Q 022360 210 LAIEKALKIASINPQRTLFF-EDSV-RNIQAGKRVGLDTVLIGKSQRVKGADYAFESIHNIKEAIPELWESDMKSEVGYP 287 (298)
Q Consensus 210 ~~~~~~l~~l~i~p~~~i~i-GDs~-~Di~~a~~aG~~~v~v~~~~~~~~ad~i~~s~~~l~~~l~~~~~~~~~~~~~~~ 287 (298)
..++++++++|++.-.-.-. -++. .=++.|+..|.+.+.=+........-.++.+.++|.+.++........ .. ..
T Consensus 3 ~~~~~~~~~~gvp~~pg~~~~~~~~eea~~~a~~iGyPVliKas~ggGG~gm~iv~~~~eL~~~~~~~~~~s~~-~f-g~ 80 (211)
T PF02786_consen 3 IRFRKLAKKLGVPVPPGSTVPISSVEEALEFAEEIGYPVLIKASAGGGGRGMRIVHNEEELEEAFERAQRESPA-AF-GD 80 (211)
T ss_dssp HHHHHHHHHTT-BBSSBESSSBSSHHHHHHHHHHH-SSEEEEETTSSTTTSEEEESSHHHHHHHHHHHHHHHHH-HH-ST
T ss_pred HHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhcCCceEEeecccccccccccccchhhhhhhhhhccccCcc-cc-cc
Confidence 46788999999854322221 2344 557777888999664333333444556888999999998876543321 12 24
Q ss_pred ceeeeeecc
Q 022360 288 GQVAVETSV 296 (298)
Q Consensus 288 ~~~~~~~~~ 296 (298)
.++-+|+.+
T Consensus 81 ~~v~iek~i 89 (211)
T PF02786_consen 81 GPVLIEKFI 89 (211)
T ss_dssp S-EEEEE--
T ss_pred ceEEEeeeh
Confidence 556666655
No 299
>KOG0622 consensus Ornithine decarboxylase [Amino acid transport and metabolism]
Probab=20.41 E-value=6.5e+02 Score=24.54 Aligned_cols=34 Identities=12% Similarity=0.326 Sum_probs=27.0
Q ss_pred HHHHHcCCCCCcEEEEcCCc--cchHHHHHcCCeEE
Q 022360 214 KALKIASINPQRTLFFEDSV--RNIQAGKRVGLDTV 247 (298)
Q Consensus 214 ~~l~~l~i~p~~~i~iGDs~--~Di~~a~~aG~~~v 247 (298)
.++..+|++|+++||.+--. .+|.-|...|+..-
T Consensus 114 ~lvl~~gv~P~riIyanpcK~~s~IkyAa~~gV~~~ 149 (448)
T KOG0622|consen 114 DLVLSLGVSPERIIYANPCKQVSQIKYAAKHGVSVM 149 (448)
T ss_pred HHHHhcCCChHHeEecCCCccHHHHHHHHHcCCeEE
Confidence 34456899999999988776 78888888888766
No 300
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=20.36 E-value=1.1e+03 Score=26.03 Aligned_cols=131 Identities=9% Similarity=-0.010 Sum_probs=0.0
Q ss_pred hhHHHHHHhCCCcEEEEeCCChH--HHHHHHHHhCCCCccceeEeecCCCCCCCCCCCCChhhHHHHHhhhcccCCCCCC
Q 022360 102 PVLRSLLLSLPLRKIIFTNADKV--HAVKVLSRLGLEDCFEGIICFETLNPTHKNTVSDDEDDIAFVESAASTTTSANGP 179 (298)
Q Consensus 102 ~g~~~~L~~l~~~~~ivS~~~~~--~~~~~l~~l~l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (298)
+.+.++++..+...++.+.+... .+...++.+|+.-.-...-..+
T Consensus 620 e~vl~I~~~e~~dgVI~~~g~~~~~~la~~le~~Gi~ilG~s~e~i~--------------------------------- 666 (1068)
T PRK12815 620 EDVLNVAEAENIKGVIVQFGGQTAINLAKGLEEAGLTILGTSPDTID--------------------------------- 666 (1068)
T ss_pred HHHHHHHhhcCCCEEEEecCcHHHHHHHHHHHHCCCeEECCcHHHHH---------------------------------
Q ss_pred chhhhccccCCCCCCcccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccchHHHHHcCCeEEEecCCCCCCCCC
Q 022360 180 QIFDIIGHFAQPNPSLVALPKTPIACKPSELAIEKALKIASINPQRTLFFEDSVRNIQAGKRVGLDTVLIGKSQRVKGAD 259 (298)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~l~i~p~~~i~iGDs~~Di~~a~~aG~~~v~v~~~~~~~~ad 259 (298)
.--+...+..+++++|++.-+...+.+-..=...+...|.+++.=+........-
T Consensus 667 -------------------------~~~DK~~f~~ll~~~GIp~P~~~~~~s~ee~~~~~~~igyPvVVKP~~~~Gg~gv 721 (1068)
T PRK12815 667 -------------------------RLEDRDRFYQLLDELGLPHVPGLTATDEEEAFAFAKRIGYPVLIRPSYVIGGQGM 721 (1068)
T ss_pred -------------------------HHcCHHHHHHHHHHcCcCCCCeEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCCE
Q ss_pred EEeCCHHHHHHHhHHhhccCcccccCCCceeeeeecccC
Q 022360 260 YAFESIHNIKEAIPELWESDMKSEVGYPGQVAVETSVTA 298 (298)
Q Consensus 260 ~i~~s~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (298)
.++.+-++|...+.+. ....+++-+|.-+..
T Consensus 722 ~iv~~~eeL~~~l~~~--------~s~~~~vlIeefI~G 752 (1068)
T PRK12815 722 AVVYDEPALEAYLAEN--------ASQLYPILIDQFIDG 752 (1068)
T ss_pred EEECCHHHHHHHHHHh--------hcCCCCEEEEEeecC
Done!