Query 022363
Match_columns 298
No_of_seqs 50 out of 52
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 04:16:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022363.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022363hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3okp_A GDP-mannose-dependent a 98.8 1.3E-08 4.6E-13 89.2 8.4 184 72-283 2-211 (394)
2 3fro_A GLGA glycogen synthase; 98.8 4.2E-08 1.4E-12 87.0 10.9 193 73-283 1-265 (439)
3 3c48_A Predicted glycosyltrans 98.6 1E-07 3.5E-12 85.7 7.5 182 75-283 21-256 (438)
4 2x6q_A Trehalose-synthase TRET 98.4 5.9E-07 2E-11 80.7 8.6 191 70-283 36-244 (416)
5 2r60_A Glycosyl transferase, g 98.4 1.6E-07 5.6E-12 87.1 3.8 188 75-283 8-275 (499)
6 1rzu_A Glycogen synthase 1; gl 98.2 1.1E-06 3.6E-11 80.9 6.0 40 75-114 1-44 (485)
7 2iw1_A Lipopolysaccharide core 98.2 4.9E-07 1.7E-11 78.9 2.2 177 76-283 2-209 (374)
8 2qzs_A Glycogen synthase; glyc 98.2 4.6E-06 1.6E-10 76.7 8.3 40 75-114 1-44 (485)
9 2iuy_A Avigt4, glycosyltransfe 98.1 7.5E-06 2.6E-10 71.6 8.3 119 72-219 1-136 (342)
10 2gek_A Phosphatidylinositol ma 98.1 3.1E-05 1.1E-09 68.3 11.6 175 75-283 21-222 (406)
11 2jjm_A Glycosyl transferase, g 97.9 3.5E-05 1.2E-09 68.6 9.1 170 85-283 25-224 (394)
12 3oy2_A Glycosyltransferase B73 97.7 0.00063 2.1E-08 60.8 13.9 181 75-283 1-197 (413)
13 1f0k_A MURG, UDP-N-acetylgluco 97.3 0.0062 2.1E-07 53.2 13.9 39 75-115 7-45 (364)
14 1vgv_A UDP-N-acetylglucosamine 95.9 0.42 1.4E-05 41.9 16.1 187 75-280 1-216 (384)
15 2vsy_A XCC0866; transferase, g 95.2 0.039 1.3E-06 51.8 7.2 80 73-158 204-290 (568)
16 3beo_A UDP-N-acetylglucosamine 94.1 0.37 1.3E-05 42.0 10.3 38 73-113 7-46 (375)
17 3s2u_A UDP-N-acetylglucosamine 93.1 0.69 2.4E-05 42.1 10.7 40 72-115 1-41 (365)
18 3otg_A CALG1; calicheamicin, T 92.8 0.66 2.3E-05 41.2 9.9 52 75-138 21-72 (412)
19 3vue_A GBSS-I, granule-bound s 92.5 2.7 9.1E-05 40.9 14.6 38 74-111 9-50 (536)
20 3ia7_A CALG4; glycosysltransfe 92.3 1 3.5E-05 39.6 10.4 51 75-137 5-55 (402)
21 3e8x_A Putative NAD-dependent 92.2 0.32 1.1E-05 40.6 6.7 89 58-161 5-95 (236)
22 4fzr_A SSFS6; structural genom 92.2 0.6 2.1E-05 41.7 8.9 51 76-138 17-67 (398)
23 1v4v_A UDP-N-acetylglucosamine 91.6 1.4 4.8E-05 38.6 10.4 35 75-112 6-41 (376)
24 3tsa_A SPNG, NDP-rhamnosyltran 91.0 1.2 4E-05 39.5 9.4 53 75-139 2-54 (391)
25 2hy7_A Glucuronosyltransferase 90.9 0.7 2.4E-05 42.5 8.2 36 74-111 14-50 (406)
26 1qgu_B Protein (nitrogenase mo 90.3 1.3 4.5E-05 43.5 9.9 86 69-166 355-448 (519)
27 3s28_A Sucrose synthase 1; gly 90.0 0.21 7.1E-06 52.1 4.1 27 257-283 557-585 (816)
28 3oti_A CALG3; calicheamicin, T 89.4 1.7 5.8E-05 38.9 9.1 36 75-112 21-56 (398)
29 3klj_A NAD(FAD)-dependent dehy 88.6 0.79 2.7E-05 42.4 6.5 81 74-161 146-230 (385)
30 2bw0_A 10-FTHFDH, 10-formyltet 88.3 2.3 8E-05 39.5 9.5 79 70-157 18-106 (329)
31 3u7q_B Nitrogenase molybdenum- 87.8 2.3 8E-05 42.0 9.7 85 70-166 360-452 (523)
32 3aek_A Light-independent proto 86.9 1.6 5.6E-05 41.6 7.7 105 68-193 301-411 (437)
33 3lk7_A UDP-N-acetylmuramoylala 86.8 2.6 9E-05 39.9 9.1 88 72-173 7-97 (451)
34 3dfz_A SIRC, precorrin-2 dehyd 86.7 1.6 5.4E-05 38.8 7.1 72 72-160 29-101 (223)
35 3mcu_A Dipicolinate synthase, 86.6 2.4 8.3E-05 37.5 8.2 114 72-193 3-137 (207)
36 3rsc_A CALG2; TDP, enediyne, s 86.4 2.9 9.9E-05 37.3 8.7 52 75-138 21-72 (415)
37 3lqk_A Dipicolinate synthase s 86.3 2.6 9E-05 36.9 8.2 113 72-195 5-141 (201)
38 2xdq_A Light-independent proto 85.5 1.2 4E-05 42.4 6.0 109 69-193 312-428 (460)
39 3g1w_A Sugar ABC transporter; 85.5 4.3 0.00015 34.4 8.9 90 73-186 3-95 (305)
40 1mio_B Nitrogenase molybdenum 85.0 4 0.00014 39.1 9.5 86 70-166 308-399 (458)
41 3czc_A RMPB; alpha/beta sandwi 85.0 1.4 4.8E-05 34.5 5.2 73 81-161 2-78 (110)
42 3hn7_A UDP-N-acetylmuramate-L- 84.3 5.1 0.00018 38.9 10.0 89 70-173 15-105 (524)
43 3aek_B Light-independent proto 83.9 3.1 0.0001 40.9 8.3 79 70-159 276-358 (525)
44 3u7q_A Nitrogenase molybdenum- 82.8 3.1 0.00011 40.7 7.8 82 70-166 344-431 (492)
45 2p1z_A Phosphoribosyltransfera 80.9 3.1 0.00011 34.8 6.2 59 70-138 110-170 (180)
46 3lxd_A FAD-dependent pyridine 80.7 3.2 0.00011 37.9 6.6 81 74-161 152-250 (415)
47 3eag_A UDP-N-acetylmuramate:L- 80.7 5.9 0.0002 35.8 8.4 85 74-173 4-91 (326)
48 3pdi_A Nitrogenase MOFE cofact 80.5 1.7 5.9E-05 42.2 5.0 86 69-166 327-415 (483)
49 2wns_A Orotate phosphoribosylt 80.2 3.4 0.00012 35.3 6.3 59 70-139 107-168 (205)
50 3mjd_A Orotate phosphoribosylt 80.0 4.6 0.00016 36.1 7.3 65 71-139 133-201 (232)
51 2xdq_B Light-independent proto 79.5 4.3 0.00015 39.5 7.4 79 70-159 299-381 (511)
52 1xhc_A NADH oxidase /nitrite r 78.8 2.5 8.5E-05 38.5 5.2 82 73-161 142-233 (367)
53 1id1_A Putative potassium chan 77.6 2.7 9.3E-05 33.2 4.5 76 72-159 1-80 (153)
54 3ef6_A Toluene 1,2-dioxygenase 77.3 2.9 0.0001 38.4 5.3 89 73-168 142-249 (410)
55 4eqs_A Coenzyme A disulfide re 77.2 3.9 0.00013 38.2 6.2 80 74-160 147-238 (437)
56 2dy0_A APRT, adenine phosphori 76.7 4.4 0.00015 33.9 5.8 58 71-138 123-183 (190)
57 2iyf_A OLED, oleandomycin glyc 76.6 2.4 8.2E-05 38.1 4.4 40 72-113 5-44 (430)
58 3lad_A Dihydrolipoamide dehydr 76.6 3.9 0.00013 38.0 6.0 80 74-160 180-278 (476)
59 2aee_A OPRT, oprtase, orotate 76.6 5 0.00017 34.3 6.2 60 71-139 114-175 (211)
60 3ics_A Coenzyme A-disulfide re 76.6 4.3 0.00015 39.0 6.5 82 73-161 186-281 (588)
61 3fg2_P Putative rubredoxin red 76.5 4.4 0.00015 36.9 6.2 88 73-167 141-248 (404)
62 2x0d_A WSAF; GT4 family, trans 76.3 1.3 4.4E-05 41.2 2.6 141 73-220 45-212 (413)
63 3q0i_A Methionyl-tRNA formyltr 76.1 11 0.00038 34.9 8.8 79 72-157 5-92 (318)
64 3ntd_A FAD-dependent pyridine 76.0 4.5 0.00015 38.3 6.3 60 73-139 150-212 (565)
65 3l7i_A Teichoic acid biosynthe 75.9 6.2 0.00021 39.3 7.6 174 72-276 350-544 (729)
66 2lta_A De novo designed protei 77.2 0.59 2E-05 37.5 0.0 49 72-132 1-49 (110)
67 2yzk_A OPRT, oprtase, orotate 75.1 6.8 0.00023 32.6 6.5 58 72-139 104-163 (178)
68 2bc0_A NADH oxidase; flavoprot 75.1 8.4 0.00029 36.3 7.9 82 73-161 193-290 (490)
69 2ps1_A Orotate phosphoribosylt 74.9 5.8 0.0002 34.4 6.3 66 71-139 122-193 (226)
70 4hv4_A UDP-N-acetylmuramate--L 73.8 12 0.0004 36.0 8.7 84 73-173 21-106 (494)
71 4dzz_A Plasmid partitioning pr 73.5 27 0.00091 27.9 9.5 78 76-160 2-85 (206)
72 3slg_A PBGP3 protein; structur 73.4 7 0.00024 34.5 6.5 87 61-161 11-102 (372)
73 1lh0_A OMP synthase; loop clos 72.8 9.6 0.00033 32.8 7.1 64 71-139 115-181 (213)
74 1trb_A Thioredoxin reductase; 72.2 10 0.00036 32.2 7.2 61 72-139 143-204 (320)
75 1mvl_A PPC decarboxylase athal 71.5 6.5 0.00022 34.7 5.8 75 72-156 17-102 (209)
76 2ffh_A Protein (FFH); SRP54, s 71.4 27 0.00092 33.6 10.6 91 67-161 91-191 (425)
77 2q1w_A Putative nucleotide sug 71.3 6.6 0.00022 34.4 5.8 86 63-161 10-100 (333)
78 3c85_A Putative glutathione-re 71.3 5.7 0.0002 32.0 5.1 72 72-159 37-114 (183)
79 2cdu_A NADPH oxidase; flavoenz 71.1 14 0.00046 34.2 8.1 82 73-161 148-246 (452)
80 3i6i_A Putative leucoanthocyan 70.8 23 0.00079 31.1 9.3 81 72-160 8-93 (346)
81 2gqw_A Ferredoxin reductase; f 70.4 14 0.00047 33.9 8.0 89 73-168 144-247 (408)
82 3h4t_A Glycosyltransferase GTF 70.2 25 0.00086 31.8 9.6 50 76-137 2-51 (404)
83 1y0b_A Xanthine phosphoribosyl 70.0 9.9 0.00034 31.7 6.4 58 71-137 117-176 (197)
84 1vl8_A Gluconate 5-dehydrogena 69.9 17 0.00059 31.2 8.1 50 57-112 4-53 (267)
85 3m3h_A OPRT, oprtase, orotate 69.6 9.1 0.00031 34.1 6.4 60 70-139 133-195 (234)
86 3rhz_A GTF3, nucleotide sugar 69.4 37 0.0013 31.1 10.6 119 77-220 14-151 (339)
87 3l6u_A ABC-type sugar transpor 68.9 32 0.0011 28.7 9.3 89 73-186 7-98 (293)
88 3ezl_A Acetoacetyl-COA reducta 68.9 20 0.00067 30.1 8.0 87 65-161 4-102 (256)
89 3pdi_B Nitrogenase MOFE cofact 68.3 5.9 0.0002 38.2 5.2 79 70-166 309-389 (458)
90 1wd5_A Hypothetical protein TT 68.2 15 0.0005 31.1 7.2 39 70-111 116-154 (208)
91 1nhp_A NADH peroxidase; oxidor 68.1 14 0.00049 34.0 7.6 82 73-161 148-245 (447)
92 2gk4_A Conserved hypothetical 68.0 19 0.00065 32.3 8.1 60 92-161 31-95 (232)
93 2zbw_A Thioredoxin reductase; 67.2 14 0.00049 31.7 7.0 61 72-139 150-211 (335)
94 3qjg_A Epidermin biosynthesis 67.1 16 0.00054 31.3 7.2 75 74-157 5-83 (175)
95 2gn4_A FLAA1 protein, UDP-GLCN 66.9 10 0.00035 33.9 6.2 85 66-161 13-102 (344)
96 3av3_A Phosphoribosylglycinami 66.6 23 0.00079 30.7 8.2 74 88-167 12-102 (212)
97 1pjq_A CYSG, siroheme synthase 66.5 16 0.00054 35.0 7.8 73 72-161 10-83 (457)
98 1ebd_A E3BD, dihydrolipoamide 66.1 19 0.00066 33.2 8.1 59 74-139 170-231 (455)
99 3o0h_A Glutathione reductase; 66.1 8.5 0.00029 36.1 5.7 80 74-160 191-286 (484)
100 3dm5_A SRP54, signal recogniti 66.0 29 0.001 33.7 9.7 84 73-160 99-192 (443)
101 3dzc_A UDP-N-acetylglucosamine 65.8 81 0.0028 28.8 14.5 37 75-114 26-64 (396)
102 1q1r_A Putidaredoxin reductase 65.5 16 0.00056 33.8 7.5 88 73-167 148-257 (431)
103 3cgb_A Pyridine nucleotide-dis 65.4 15 0.00051 34.5 7.2 82 73-161 185-281 (480)
104 3m9w_A D-xylose-binding peripl 64.6 65 0.0022 27.3 10.6 40 73-112 1-40 (313)
105 3itj_A Thioredoxin reductase 1 64.5 18 0.00061 30.8 7.0 59 71-139 170-229 (338)
106 3dez_A OPRT, oprtase, orotate 64.4 15 0.00052 32.9 6.8 61 70-139 145-207 (243)
107 1zn8_A APRT, adenine phosphori 64.3 8.3 0.00028 31.7 4.7 35 71-108 117-151 (180)
108 1v59_A Dihydrolipoamide dehydr 64.3 18 0.00062 33.5 7.6 59 74-139 183-244 (478)
109 1jkx_A GART;, phosphoribosylgl 64.3 40 0.0014 29.3 9.3 81 75-167 2-99 (212)
110 3iwa_A FAD-dependent pyridine 64.2 8.8 0.0003 35.7 5.4 81 74-161 159-257 (472)
111 3jy6_A Transcriptional regulat 64.0 47 0.0016 27.6 9.5 41 73-113 6-46 (276)
112 3l49_A ABC sugar (ribose) tran 63.8 49 0.0017 27.5 9.5 41 73-113 4-44 (291)
113 3n2l_A OPRT, oprtase, orotate 63.7 18 0.00061 32.5 7.1 64 71-139 140-206 (238)
114 2v3a_A Rubredoxin reductase; a 63.7 22 0.00075 31.9 7.8 81 74-161 145-242 (384)
115 3fbs_A Oxidoreductase; structu 63.4 14 0.00048 30.8 6.0 76 72-160 139-224 (297)
116 1vch_A Phosphoribosyltransfera 63.3 8.3 0.00028 31.4 4.5 34 72-108 118-151 (175)
117 2ywr_A Phosphoribosylglycinami 63.2 32 0.0011 29.9 8.5 64 88-157 10-87 (216)
118 2eq6_A Pyruvate dehydrogenase 63.2 20 0.00068 33.5 7.6 59 74-139 169-230 (464)
119 1zmd_A Dihydrolipoyl dehydroge 63.1 20 0.00069 33.3 7.6 59 74-139 178-240 (474)
120 3ab1_A Ferredoxin--NADP reduct 62.8 15 0.00052 32.2 6.4 61 72-139 161-222 (360)
121 2hmt_A YUAA protein; RCK, KTN, 62.8 7.9 0.00027 29.0 4.0 72 73-160 5-80 (144)
122 1onf_A GR, grase, glutathione 62.7 20 0.00068 33.9 7.6 81 74-161 176-274 (500)
123 2a8x_A Dihydrolipoyl dehydroge 62.7 20 0.00067 33.2 7.4 59 74-139 171-232 (464)
124 3auf_A Glycinamide ribonucleot 62.5 29 0.00099 30.7 8.2 64 88-157 31-108 (229)
125 2p6p_A Glycosyl transferase; X 62.4 12 0.00041 33.0 5.7 36 76-113 2-37 (384)
126 3r9u_A Thioredoxin reductase; 62.4 19 0.00065 30.3 6.7 58 72-139 145-203 (315)
127 2r9z_A Glutathione amide reduc 62.3 20 0.00069 33.5 7.5 80 74-160 166-262 (463)
128 1hdo_A Biliverdin IX beta redu 62.1 12 0.00041 29.6 5.1 74 72-160 1-77 (206)
129 3k30_A Histamine dehydrogenase 62.1 12 0.0004 37.2 6.1 85 71-160 520-622 (690)
130 1ges_A Glutathione reductase; 62.1 20 0.00069 33.3 7.4 80 74-160 167-263 (450)
131 1d1q_A Tyrosine phosphatase (E 62.0 12 0.00042 30.9 5.4 92 73-168 6-105 (161)
132 3o74_A Fructose transport syst 61.7 41 0.0014 27.6 8.6 41 73-113 1-41 (272)
133 2iya_A OLEI, oleandomycin glyc 61.5 12 0.0004 33.7 5.5 40 72-113 10-49 (424)
134 2hq1_A Glucose/ribitol dehydro 61.3 35 0.0012 28.1 8.1 80 72-161 3-94 (247)
135 2px0_A Flagellar biosynthesis 61.2 53 0.0018 29.4 9.9 84 73-160 104-192 (296)
136 1vdm_A Purine phosphoribosyltr 61.0 9.6 0.00033 30.3 4.4 35 71-108 80-114 (153)
137 1l1q_A Adenine phosphoribosylt 60.9 11 0.00036 31.5 4.9 32 72-106 115-146 (186)
138 3n8i_A Low molecular weight ph 60.9 20 0.0007 29.7 6.5 94 72-169 3-103 (157)
139 3uug_A Multiple sugar-binding 60.8 70 0.0024 27.2 10.1 90 73-187 2-94 (330)
140 1j8m_F SRP54, signal recogniti 60.6 62 0.0021 29.1 10.2 85 73-161 97-191 (297)
141 2j37_W Signal recognition part 60.4 56 0.0019 32.1 10.6 86 73-162 100-195 (504)
142 3oc4_A Oxidoreductase, pyridin 60.4 24 0.00083 32.6 7.6 81 73-160 146-242 (452)
143 2xxa_A Signal recognition part 60.2 47 0.0016 31.7 9.8 89 68-160 92-193 (433)
144 4huj_A Uncharacterized protein 60.1 27 0.00093 29.4 7.3 83 68-170 17-99 (220)
145 3afn_B Carbonyl reductase; alp 60.0 47 0.0016 27.3 8.6 79 72-160 5-95 (258)
146 3dgz_A Thioredoxin reductase 2 59.8 23 0.0008 33.1 7.5 59 74-139 185-245 (488)
147 1vma_A Cell division protein F 59.8 73 0.0025 28.9 10.6 90 68-161 96-197 (306)
148 3tqq_A Methionyl-tRNA formyltr 59.7 26 0.00089 32.3 7.7 76 75-157 3-87 (314)
149 3dk9_A Grase, GR, glutathione 59.6 24 0.00082 32.8 7.5 59 74-139 187-248 (478)
150 3ek2_A Enoyl-(acyl-carrier-pro 59.6 20 0.00069 30.0 6.4 45 65-113 5-49 (271)
151 1lvl_A Dihydrolipoamide dehydr 59.1 19 0.00063 33.6 6.6 59 74-139 171-232 (458)
152 2hqm_A GR, grase, glutathione 59.1 24 0.00082 33.0 7.4 59 74-139 185-246 (479)
153 3ruf_A WBGU; rossmann fold, UD 59.0 50 0.0017 28.6 9.0 79 71-160 22-110 (351)
154 1mo9_A ORF3; nucleotide bindin 59.0 25 0.00087 33.4 7.7 59 74-139 214-275 (523)
155 2q0l_A TRXR, thioredoxin reduc 58.7 26 0.00088 29.8 6.9 58 72-139 141-199 (311)
156 1zu4_A FTSY; GTPase, signal re 58.4 49 0.0017 30.1 9.2 91 68-163 97-204 (320)
157 3kkl_A Probable chaperone prot 58.4 13 0.00045 32.8 5.3 42 74-115 3-53 (244)
158 1u7z_A Coenzyme A biosynthesis 58.3 16 0.00056 32.5 5.8 58 92-161 36-98 (226)
159 1xg5_A ARPG836; short chain de 58.1 39 0.0013 28.7 8.1 83 67-160 25-121 (279)
160 4amg_A Snogd; transferase, pol 57.9 6.6 0.00023 34.6 3.2 41 70-112 18-58 (400)
161 3fwz_A Inner membrane protein 57.9 38 0.0013 26.2 7.3 70 75-160 8-81 (140)
162 2l82_A Designed protein OR32; 57.8 74 0.0025 26.8 9.3 82 88-172 10-99 (162)
163 2c07_A 3-oxoacyl-(acyl-carrier 57.5 32 0.0011 29.6 7.4 83 68-161 38-132 (285)
164 1ls1_A Signal recognition part 57.2 87 0.003 27.9 10.5 89 67-159 91-189 (295)
165 2qae_A Lipoamide, dihydrolipoy 57.2 29 0.001 32.1 7.6 59 74-139 174-236 (468)
166 2pzm_A Putative nucleotide sug 57.1 41 0.0014 29.2 8.2 85 64-161 10-99 (330)
167 2x5o_A UDP-N-acetylmuramoylala 56.7 7.5 0.00026 36.5 3.5 72 73-161 4-75 (439)
168 2yqu_A 2-oxoglutarate dehydrog 56.7 30 0.001 31.9 7.5 81 74-161 167-263 (455)
169 1zk7_A HGII, reductase, mercur 56.7 30 0.001 32.0 7.6 80 74-160 176-269 (467)
170 1dxl_A Dihydrolipoamide dehydr 56.3 19 0.00065 33.2 6.1 59 74-139 177-238 (470)
171 3cty_A Thioredoxin reductase; 56.2 31 0.0011 29.5 7.1 58 72-139 153-210 (319)
172 2g1u_A Hypothetical protein TM 56.1 17 0.00057 28.7 5.0 74 71-160 16-94 (155)
173 1u9y_A RPPK;, ribose-phosphate 56.1 16 0.00053 33.2 5.4 38 71-111 202-239 (284)
174 4fk1_A Putative thioredoxin re 56.0 23 0.0008 30.4 6.3 57 72-139 144-200 (304)
175 3urh_A Dihydrolipoyl dehydroge 55.4 25 0.00085 32.9 6.8 59 74-139 198-259 (491)
176 3gem_A Short chain dehydrogena 55.3 40 0.0014 29.0 7.7 75 72-160 25-109 (260)
177 3rfo_A Methionyl-tRNA formyltr 55.0 24 0.00083 32.6 6.6 76 75-157 5-89 (317)
178 2wm3_A NMRA-like family domain 55.0 67 0.0023 27.3 9.0 74 74-160 5-82 (299)
179 3gbv_A Putative LACI-family tr 54.9 90 0.0031 25.9 9.6 39 73-111 7-47 (304)
180 3kd9_A Coenzyme A disulfide re 54.8 19 0.00065 33.2 5.9 81 73-161 147-243 (449)
181 3e61_A Putative transcriptiona 54.6 58 0.002 26.9 8.3 41 73-113 7-47 (277)
182 4hwg_A UDP-N-acetylglucosamine 54.4 1.3E+02 0.0045 27.6 12.7 59 208-278 152-212 (385)
183 2f00_A UDP-N-acetylmuramate--L 54.3 38 0.0013 32.2 8.1 72 73-161 18-89 (491)
184 3dgh_A TRXR-1, thioredoxin red 53.8 43 0.0015 31.2 8.2 59 74-139 187-247 (483)
185 4gi5_A Quinone reductase; prot 53.8 25 0.00086 32.0 6.4 104 68-173 16-143 (280)
186 1ojt_A Surface protein; redox- 53.7 21 0.00072 33.4 6.1 59 74-139 185-246 (482)
187 2x8g_A Thioredoxin glutathione 53.6 33 0.0011 33.0 7.5 59 74-139 286-346 (598)
188 2o23_A HADH2 protein; HSD17B10 53.6 80 0.0027 26.2 9.1 36 72-113 10-45 (265)
189 1fl2_A Alkyl hydroperoxide red 53.3 32 0.0011 29.1 6.7 57 73-139 143-200 (310)
190 1ja9_A 4HNR, 1,3,6,8-tetrahydr 53.2 22 0.00076 29.7 5.6 80 71-160 18-109 (274)
191 1g2q_A Adenine phosphoribosylt 53.1 16 0.00055 30.4 4.6 35 71-108 119-153 (187)
192 3pxx_A Carveol dehydrogenase; 53.1 1E+02 0.0035 26.0 10.6 88 68-161 4-110 (287)
193 2wpf_A Trypanothione reductase 52.9 32 0.0011 32.5 7.3 80 74-160 191-290 (495)
194 3f9i_A 3-oxoacyl-[acyl-carrier 52.8 32 0.0011 28.6 6.5 84 66-161 6-95 (249)
195 3tb6_A Arabinose metabolism tr 52.3 74 0.0025 26.3 8.7 40 74-113 15-54 (298)
196 3f8d_A Thioredoxin reductase ( 52.3 31 0.0011 28.9 6.4 60 70-139 150-210 (323)
197 3ctm_A Carbonyl reductase; alc 52.3 1.1E+02 0.0036 25.9 9.9 79 72-161 32-122 (279)
198 1yb1_A 17-beta-hydroxysteroid 52.3 1.1E+02 0.0037 26.0 10.0 79 71-160 28-118 (272)
199 3sho_A Transcriptional regulat 52.1 30 0.001 27.8 6.0 38 74-115 88-125 (187)
200 3rot_A ABC sugar transporter, 52.1 53 0.0018 27.7 7.9 93 72-187 1-96 (297)
201 3k31_A Enoyl-(acyl-carrier-pro 52.1 43 0.0015 29.2 7.5 49 61-113 17-65 (296)
202 2q7v_A Thioredoxin reductase; 52.0 35 0.0012 29.3 6.8 57 73-139 151-208 (325)
203 1p3d_A UDP-N-acetylmuramate--a 52.0 41 0.0014 31.9 7.8 72 73-161 17-88 (475)
204 2v3c_C SRP54, signal recogniti 51.5 40 0.0014 32.3 7.7 84 75-162 100-192 (432)
205 1jx7_A Hypothetical protein YC 51.3 47 0.0016 24.7 6.6 65 75-139 3-78 (117)
206 1j6u_A UDP-N-acetylmuramate-al 51.1 27 0.00092 33.3 6.4 65 94-169 26-92 (469)
207 1qb7_A APRT, adenine phosphori 51.0 18 0.00061 31.7 4.8 35 71-108 135-169 (236)
208 1mio_A Nitrogenase molybdenum 50.6 40 0.0014 33.3 7.7 39 69-114 330-368 (533)
209 2ew8_A (S)-1-phenylethanol deh 50.3 87 0.003 26.2 8.9 76 72-160 5-92 (249)
210 3gdg_A Probable NADP-dependent 50.0 34 0.0012 28.8 6.3 39 72-114 18-56 (267)
211 1dku_A Protein (phosphoribosyl 49.9 24 0.00081 32.6 5.6 42 71-115 214-255 (317)
212 4id9_A Short-chain dehydrogena 49.8 61 0.0021 28.0 8.0 74 66-160 11-87 (347)
213 3llv_A Exopolyphosphatase-rela 49.7 58 0.002 24.7 7.1 71 73-159 5-79 (141)
214 3gk3_A Acetoacetyl-COA reducta 49.5 29 0.001 29.5 5.9 43 66-114 17-59 (269)
215 3ijr_A Oxidoreductase, short c 49.3 1.2E+02 0.0041 26.3 9.9 82 70-161 43-136 (291)
216 2yjn_A ERYCIII, glycosyltransf 48.8 15 0.00052 33.4 4.2 38 74-113 20-57 (441)
217 3qfa_A Thioredoxin reductase 1 48.7 41 0.0014 32.0 7.3 59 74-139 210-270 (519)
218 4e4t_A Phosphoribosylaminoimid 48.6 38 0.0013 31.7 6.9 34 71-111 32-65 (419)
219 2wsb_A Galactitol dehydrogenas 48.5 65 0.0022 26.5 7.7 35 72-112 9-43 (254)
220 3o38_A Short chain dehydrogena 48.4 82 0.0028 26.5 8.4 81 68-160 16-111 (266)
221 1hgx_A HGXPRTASE, hypoxanthine 48.3 20 0.00068 29.6 4.4 35 71-108 92-126 (183)
222 4ds3_A Phosphoribosylglycinami 48.2 91 0.0031 27.2 8.9 74 72-157 5-93 (209)
223 1sny_A Sniffer CG10964-PA; alp 48.0 94 0.0032 25.8 8.7 42 66-113 13-57 (267)
224 2gas_A Isoflavone reductase; N 47.8 1E+02 0.0035 26.0 8.9 80 74-160 2-86 (307)
225 1lu9_A Methylene tetrahydromet 47.7 51 0.0017 28.8 7.2 79 72-161 117-199 (287)
226 4dna_A Probable glutathione re 47.4 52 0.0018 30.4 7.6 80 74-160 170-266 (463)
227 1meo_A Phosophoribosylglycinam 47.3 83 0.0028 27.3 8.5 81 75-167 2-99 (209)
228 3egc_A Putative ribose operon 47.3 86 0.0029 26.1 8.3 41 73-113 7-47 (291)
229 4etn_A LMPTP, low molecular we 47.3 39 0.0013 28.9 6.2 88 75-166 35-126 (184)
230 3awd_A GOX2181, putative polyo 47.2 1.2E+02 0.0041 25.0 9.9 79 72-161 11-101 (260)
231 3lrt_A Ribose-phosphate pyroph 47.2 26 0.00089 32.1 5.4 39 71-112 200-238 (286)
232 3kl4_A SRP54, signal recogniti 47.0 85 0.0029 30.3 9.2 85 73-161 96-190 (433)
233 3lzw_A Ferredoxin--NADP reduct 47.0 55 0.0019 27.6 7.1 59 71-139 151-209 (332)
234 4ep1_A Otcase, ornithine carba 46.8 65 0.0022 30.5 8.2 81 72-160 177-257 (340)
235 1vdc_A NTR, NADPH dependent th 46.7 38 0.0013 29.0 6.1 58 72-139 157-215 (333)
236 3sc4_A Short chain dehydrogena 46.6 1.4E+02 0.0048 25.7 9.8 83 72-161 7-104 (285)
237 2geb_A Hypoxanthine-guanine ph 46.4 22 0.00074 29.6 4.4 35 71-108 95-129 (185)
238 3dlo_A Universal stress protei 46.4 66 0.0023 25.1 7.1 93 66-159 16-126 (155)
239 3d1c_A Flavin-containing putat 46.2 50 0.0017 28.6 6.9 60 73-139 165-235 (369)
240 4iin_A 3-ketoacyl-acyl carrier 46.2 62 0.0021 27.5 7.4 80 72-161 27-118 (271)
241 2bln_A Protein YFBG; transfera 46.1 50 0.0017 30.2 7.1 67 90-156 9-81 (305)
242 1jzt_A Hypothetical 27.5 kDa p 45.8 32 0.0011 30.6 5.6 60 75-138 59-118 (246)
243 1yfz_A Hypoxanthine-guanine ph 45.7 22 0.00076 30.0 4.4 35 71-108 115-149 (205)
244 2ji4_A Phosphoribosyl pyrophos 45.7 25 0.00086 33.4 5.2 40 70-112 268-307 (379)
245 3h75_A Periplasmic sugar-bindi 45.3 86 0.003 27.2 8.3 41 72-112 1-42 (350)
246 4e3z_A Putative oxidoreductase 45.3 65 0.0022 27.3 7.4 66 92-161 38-115 (272)
247 3icc_A Putative 3-oxoacyl-(acy 45.0 70 0.0024 26.5 7.4 38 72-115 5-42 (255)
248 3loq_A Universal stress protei 44.8 1.3E+02 0.0045 25.5 9.3 85 73-159 169-260 (294)
249 1kyq_A Met8P, siroheme biosynt 44.8 15 0.00053 33.4 3.5 35 72-113 11-45 (274)
250 1xdi_A RV3303C-LPDA; reductase 44.7 46 0.0016 31.2 6.8 80 74-160 182-277 (499)
251 1a3c_A PYRR, pyrimidine operon 44.6 19 0.00064 29.5 3.7 32 72-106 96-128 (181)
252 2xbl_A Phosphoheptose isomeras 44.5 52 0.0018 26.6 6.3 39 73-115 116-154 (198)
253 3s5j_B Ribose-phosphate pyroph 44.5 33 0.0011 32.1 5.8 40 70-112 209-248 (326)
254 1fmc_A 7 alpha-hydroxysteroid 44.4 1.3E+02 0.0045 24.6 8.9 79 72-161 9-99 (255)
255 1tk9_A Phosphoheptose isomeras 44.3 40 0.0014 27.0 5.6 39 73-115 110-148 (188)
256 1cyd_A Carbonyl reductase; sho 44.2 96 0.0033 25.3 8.0 74 72-160 5-86 (244)
257 1xq6_A Unknown protein; struct 44.2 75 0.0026 25.7 7.3 74 72-161 2-80 (253)
258 1fec_A Trypanothione reductase 44.0 51 0.0017 31.0 7.1 80 74-160 187-286 (490)
259 3osu_A 3-oxoacyl-[acyl-carrier 43.8 75 0.0026 26.6 7.4 67 91-161 15-93 (246)
260 2q2v_A Beta-D-hydroxybutyrate 43.4 91 0.0031 26.1 7.9 76 72-160 2-89 (255)
261 1qyc_A Phenylcoumaran benzylic 43.1 98 0.0034 26.1 8.1 80 74-160 4-87 (308)
262 3l18_A Intracellular protease 43.1 47 0.0016 26.4 5.8 71 73-158 1-71 (168)
263 3d02_A Putative LACI-type tran 43.1 95 0.0033 25.9 8.0 39 73-111 3-41 (303)
264 1ufr_A TT1027, PYR mRNA-bindin 42.9 21 0.0007 29.4 3.7 30 72-104 94-123 (181)
265 2fep_A Catabolite control prot 42.8 1.5E+02 0.0051 24.9 9.3 40 73-112 15-54 (289)
266 2yvq_A Carbamoyl-phosphate syn 42.5 55 0.0019 26.5 6.2 64 77-156 27-102 (143)
267 1wv2_A Thiazole moeity, thiazo 42.4 35 0.0012 31.7 5.4 83 79-161 110-220 (265)
268 1jl3_A Arsenate reductase; alp 42.3 32 0.0011 27.5 4.7 78 72-158 1-82 (139)
269 2fvy_A D-galactose-binding per 42.2 1.5E+02 0.0051 24.7 9.5 40 73-112 1-41 (309)
270 1sb8_A WBPP; epimerase, 4-epim 41.5 1.4E+02 0.0049 25.9 9.1 83 72-161 25-113 (352)
271 3oid_A Enoyl-[acyl-carrier-pro 41.5 66 0.0023 27.4 6.8 65 92-160 16-92 (258)
272 3d3w_A L-xylulose reductase; u 41.2 1.2E+02 0.0042 24.7 8.3 74 72-160 5-86 (244)
273 1otf_A 4-oxalocrotonate tautom 41.1 32 0.0011 22.9 3.9 38 238-281 10-47 (62)
274 2bgk_A Rhizome secoisolaricire 41.1 96 0.0033 25.9 7.7 36 70-111 12-47 (278)
275 2fb6_A Conserved hypothetical 40.8 38 0.0013 26.8 4.9 68 74-142 8-80 (117)
276 3dah_A Ribose-phosphate pyroph 40.7 32 0.0011 32.1 5.0 39 71-112 213-251 (319)
277 2r6j_A Eugenol synthase 1; phe 40.7 78 0.0027 27.1 7.2 75 75-160 12-89 (318)
278 1uls_A Putative 3-oxoacyl-acyl 40.5 1.1E+02 0.0037 25.7 7.9 35 72-112 3-37 (245)
279 1gee_A Glucose 1-dehydrogenase 40.4 69 0.0024 26.6 6.6 80 72-161 5-96 (261)
280 3qw4_B UMP synthase; N-termina 40.4 44 0.0015 32.4 6.2 59 70-139 361-422 (453)
281 1rkx_A CDP-glucose-4,6-dehydra 40.2 73 0.0025 27.7 7.0 80 70-160 5-90 (357)
282 1o94_A Tmadh, trimethylamine d 39.9 58 0.002 32.7 7.1 64 73-142 527-594 (729)
283 4dmm_A 3-oxoacyl-[acyl-carrier 39.5 88 0.003 26.8 7.4 80 72-161 26-117 (269)
284 3h8l_A NADH oxidase; membrane 39.5 29 0.001 31.3 4.5 71 92-162 185-270 (409)
285 1f0k_A MURG, UDP-N-acetylgluco 39.5 1.4E+02 0.0048 25.5 8.6 85 76-168 185-271 (364)
286 2opa_A Probable tautomerase YW 39.4 35 0.0012 22.7 3.9 33 238-275 10-42 (61)
287 2uvd_A 3-oxoacyl-(acyl-carrier 39.1 69 0.0024 26.7 6.5 79 72-160 2-92 (246)
288 4gcm_A TRXR, thioredoxin reduc 38.9 72 0.0025 27.2 6.7 36 71-113 142-177 (312)
289 3u9l_A 3-oxoacyl-[acyl-carrier 38.9 1.6E+02 0.0056 26.2 9.3 83 72-160 3-97 (324)
290 1ea9_C Cyclomaltodextrinase; h 38.8 74 0.0025 31.1 7.5 47 93-139 174-238 (583)
291 1o5i_A 3-oxoacyl-(acyl carrier 38.8 1.3E+02 0.0045 25.3 8.2 41 66-112 11-51 (249)
292 3v2g_A 3-oxoacyl-[acyl-carrier 38.8 85 0.0029 27.0 7.2 79 72-160 29-119 (271)
293 3kke_A LACI family transcripti 38.8 1.7E+02 0.0057 24.8 8.9 41 73-113 14-54 (303)
294 1fmt_A Methionyl-tRNA FMet for 38.8 68 0.0023 29.4 6.9 68 90-157 12-88 (314)
295 3rag_A Uncharacterized protein 38.7 67 0.0023 29.1 6.7 64 73-139 9-74 (242)
296 3ouz_A Biotin carboxylase; str 38.7 52 0.0018 30.4 6.1 37 70-113 2-38 (446)
297 1p3y_1 MRSD protein; flavoprot 38.6 27 0.00093 30.2 4.0 74 72-156 6-87 (194)
298 1rrv_A Glycosyltransferase GTF 38.5 46 0.0016 29.8 5.6 36 76-113 2-37 (416)
299 2x5n_A SPRPN10, 26S proteasome 38.4 69 0.0024 27.0 6.4 34 77-112 110-143 (192)
300 1xgk_A Nitrogen metabolite rep 38.2 1.4E+02 0.0048 26.7 8.8 74 73-159 4-82 (352)
301 2yx6_A Hypothetical protein PH 38.2 45 0.0016 25.7 4.8 37 95-139 54-90 (121)
302 3tzq_B Short-chain type dehydr 38.1 1.5E+02 0.0052 25.2 8.6 36 72-113 9-44 (271)
303 4da9_A Short-chain dehydrogena 38.0 87 0.003 27.0 7.1 79 72-160 27-117 (280)
304 3r1i_A Short-chain type dehydr 37.5 1.6E+02 0.0054 25.4 8.7 78 72-160 30-119 (276)
305 3d8u_A PURR transcriptional re 37.5 1.2E+02 0.0039 25.0 7.5 40 73-112 2-41 (275)
306 3sju_A Keto reductase; short-c 37.4 2E+02 0.0067 24.7 9.5 84 67-161 17-112 (279)
307 3mc3_A DSRE/DSRF-like family p 37.4 70 0.0024 25.3 6.0 43 74-116 16-58 (134)
308 4evq_A Putative ABC transporte 37.3 1.1E+02 0.0036 26.4 7.5 82 92-173 138-231 (375)
309 2wan_A Pullulanase; hydrolase, 37.3 34 0.0012 35.9 5.1 26 201-229 597-623 (921)
310 3rkr_A Short chain oxidoreduct 37.3 1.9E+02 0.0063 24.4 9.1 83 67-160 22-116 (262)
311 1sby_A Alcohol dehydrogenase; 37.2 1.1E+02 0.0038 25.4 7.4 34 72-111 3-37 (254)
312 2bka_A CC3, TAT-interacting pr 37.1 79 0.0027 25.7 6.4 75 72-161 16-95 (242)
313 1w6u_A 2,4-dienoyl-COA reducta 37.0 51 0.0017 28.2 5.4 45 62-112 14-58 (302)
314 2a87_A TRXR, TR, thioredoxin r 37.0 69 0.0024 27.7 6.3 57 73-139 154-211 (335)
315 3l6e_A Oxidoreductase, short-c 37.0 1.2E+02 0.004 25.4 7.6 35 72-112 1-35 (235)
316 3bbl_A Regulatory protein of L 36.7 1.8E+02 0.0063 24.2 8.9 39 73-111 3-45 (287)
317 1o57_A PUR operon repressor; p 36.6 28 0.00095 31.7 3.9 35 71-108 193-227 (291)
318 3mlc_A FG41 malonate semialdeh 36.4 59 0.002 26.2 5.4 32 238-275 75-106 (136)
319 2rk3_A Protein DJ-1; parkinson 36.3 1.2E+02 0.0042 24.7 7.5 75 72-159 1-75 (197)
320 3hp4_A GDSL-esterase; psychrot 36.2 1.5E+02 0.005 22.8 8.3 43 73-115 1-48 (185)
321 3tjr_A Short chain dehydrogena 36.2 2.2E+02 0.0074 24.8 10.2 79 72-161 29-119 (301)
322 1z7g_A HGPRT, HGPRTASE, hypoxa 36.0 43 0.0015 28.8 4.8 37 69-108 121-157 (217)
323 1tc1_A Protein (hypoxanthine p 35.8 38 0.0013 29.5 4.4 35 71-108 100-134 (220)
324 1dbq_A Purine repressor; trans 35.8 1.8E+02 0.0063 23.9 8.7 39 73-111 6-44 (289)
325 4eyg_A Twin-arginine transloca 35.8 1.2E+02 0.004 26.1 7.5 81 92-172 126-218 (368)
326 3gpi_A NAD-dependent epimerase 35.7 22 0.00074 30.2 2.8 69 72-160 1-73 (286)
327 3grp_A 3-oxoacyl-(acyl carrier 35.7 1.6E+02 0.0054 25.2 8.4 36 71-112 24-59 (266)
328 1oao_A CODH, carbon monoxide d 35.6 53 0.0018 34.1 6.1 74 68-158 267-353 (674)
329 4ehi_A Bifunctional purine bio 35.5 66 0.0022 32.6 6.6 53 68-137 17-69 (534)
330 3idf_A USP-like protein; unive 35.4 1E+02 0.0035 22.8 6.3 23 93-115 17-41 (138)
331 3ry0_A Putative tautomerase; o 35.4 43 0.0015 23.0 3.9 38 238-281 10-47 (65)
332 4iiu_A 3-oxoacyl-[acyl-carrier 35.2 1.2E+02 0.004 25.6 7.4 80 72-161 24-115 (267)
333 3ucx_A Short chain dehydrogena 35.2 2E+02 0.007 24.2 9.5 80 70-160 7-98 (264)
334 3ksu_A 3-oxoacyl-acyl carrier 35.1 1.3E+02 0.0045 25.5 7.7 82 72-161 9-102 (262)
335 3trj_A Phosphoheptose isomeras 35.1 64 0.0022 27.0 5.6 39 74-116 115-153 (201)
336 3is3_A 17BETA-hydroxysteroid d 35.1 1.1E+02 0.0038 26.0 7.2 80 72-161 16-107 (270)
337 3p9x_A Phosphoribosylglycinami 34.9 1.2E+02 0.004 26.6 7.5 82 75-168 4-102 (211)
338 3tqr_A Phosphoribosylglycinami 34.7 1.6E+02 0.0053 25.8 8.2 71 75-157 7-90 (215)
339 3brs_A Periplasmic binding pro 34.6 82 0.0028 26.1 6.2 39 73-112 4-45 (289)
340 1g0o_A Trihydroxynaphthalene r 34.5 2.1E+02 0.0073 24.3 11.0 81 71-161 26-118 (283)
341 4e5v_A Putative THUA-like prot 34.5 87 0.003 28.3 6.8 39 73-112 3-42 (281)
342 3abf_A 4-oxalocrotonate tautom 34.2 56 0.0019 21.9 4.2 33 238-275 11-43 (64)
343 3ej9_A Alpha-subunit of trans- 34.2 64 0.0022 23.2 4.8 39 238-282 11-49 (76)
344 3m20_A 4-oxalocrotonate tautom 34.1 65 0.0022 22.1 4.6 39 238-282 9-47 (62)
345 2pln_A HP1043, response regula 33.9 67 0.0023 23.4 5.0 38 66-109 10-47 (137)
346 3o1i_D Periplasmic protein TOR 33.9 1.4E+02 0.0047 24.8 7.5 87 73-183 4-93 (304)
347 3s55_A Putative short-chain de 33.9 2.2E+02 0.0074 24.1 10.3 38 70-113 6-43 (281)
348 1jf8_A Arsenate reductase; ptp 33.8 54 0.0019 26.0 4.8 78 72-158 1-82 (131)
349 1pzm_A HGPRT, hypoxanthine-gua 33.8 43 0.0015 28.7 4.4 35 71-108 115-149 (211)
350 4e6p_A Probable sorbitol dehyd 33.7 1.5E+02 0.0051 24.9 7.8 34 72-111 6-39 (259)
351 3uve_A Carveol dehydrogenase ( 33.7 2.2E+02 0.0075 24.2 9.9 37 71-113 8-44 (286)
352 3rwb_A TPLDH, pyridoxal 4-dehy 33.7 1.3E+02 0.0045 25.2 7.4 34 72-111 4-37 (247)
353 1jeo_A MJ1247, hypothetical pr 33.4 78 0.0027 25.2 5.7 39 73-115 82-120 (180)
354 1zcz_A Bifunctional purine bio 33.4 35 0.0012 34.0 4.2 46 77-139 15-60 (464)
355 1qsg_A Enoyl-[acyl-carrier-pro 33.3 1.2E+02 0.0042 25.5 7.2 38 72-113 7-44 (265)
356 1iir_A Glycosyltransferase GTF 33.3 65 0.0022 28.9 5.7 36 76-113 2-37 (415)
357 3c3k_A Alanine racemase; struc 33.2 2.1E+02 0.0072 23.8 9.0 40 73-112 7-46 (285)
358 3uf0_A Short-chain dehydrogena 33.1 2.1E+02 0.0072 24.5 8.8 78 72-161 29-117 (273)
359 1qyd_A Pinoresinol-lariciresin 33.1 1.5E+02 0.0053 24.9 7.8 79 75-160 5-86 (313)
360 2i6u_A Otcase, ornithine carba 33.0 2.1E+02 0.0072 26.4 9.2 81 72-161 146-228 (307)
361 3hs3_A Ribose operon repressor 33.0 68 0.0023 26.8 5.5 39 73-111 9-48 (277)
362 3miz_A Putative transcriptiona 32.9 84 0.0029 26.5 6.0 40 73-112 12-52 (301)
363 4a8p_A Putrescine carbamoyltra 32.8 2E+02 0.0069 27.3 9.2 78 72-158 151-228 (355)
364 3vtz_A Glucose 1-dehydrogenase 32.7 33 0.0011 29.5 3.5 42 66-113 6-47 (269)
365 1zk4_A R-specific alcohol dehy 32.7 1.2E+02 0.0041 24.9 6.9 35 72-112 4-38 (251)
366 3enk_A UDP-glucose 4-epimerase 32.7 2.3E+02 0.0079 24.2 8.9 78 73-161 4-89 (341)
367 3ic5_A Putative saccharopine d 32.7 1.3E+02 0.0045 21.3 8.1 70 74-159 5-78 (118)
368 1lss_A TRK system potassium up 32.6 1.5E+02 0.005 21.8 7.3 70 74-159 4-78 (140)
369 3ic9_A Dihydrolipoamide dehydr 32.5 1.1E+02 0.0037 28.8 7.3 58 74-139 174-234 (492)
370 3m21_A Probable tautomerase HP 32.5 51 0.0018 22.8 3.9 32 238-274 13-44 (67)
371 3mb2_A 4-oxalocrotonate tautom 32.5 57 0.0019 23.0 4.2 38 238-281 11-48 (72)
372 3oj0_A Glutr, glutamyl-tRNA re 32.4 67 0.0023 24.8 5.0 69 74-160 21-90 (144)
373 3rft_A Uronate dehydrogenase; 32.3 1.1E+02 0.0036 25.9 6.6 71 72-160 1-74 (267)
374 1z45_A GAL10 bifunctional prot 32.3 2.3E+02 0.0079 27.6 9.8 84 70-161 7-95 (699)
375 1b93_A Protein (methylglyoxal 32.3 75 0.0025 26.9 5.5 67 74-156 11-88 (152)
376 3nrc_A Enoyl-[acyl-carrier-pro 32.2 66 0.0023 27.6 5.4 84 67-161 19-114 (280)
377 3rd5_A Mypaa.01249.C; ssgcid, 32.2 89 0.003 26.8 6.2 78 70-161 12-97 (291)
378 1vlv_A Otcase, ornithine carba 32.1 1.7E+02 0.0057 27.4 8.4 80 72-160 165-246 (325)
379 1iy8_A Levodione reductase; ox 32.0 2.3E+02 0.0078 23.8 9.8 39 68-112 7-45 (267)
380 1gyx_A YDCE, B1461, hypothetic 31.9 50 0.0017 23.6 3.9 41 238-284 10-51 (76)
381 3edm_A Short chain dehydrogena 31.9 1.3E+02 0.0045 25.4 7.2 79 72-160 6-96 (259)
382 3ecs_A Translation initiation 31.8 2.3E+02 0.0079 26.3 9.3 81 67-158 114-197 (315)
383 3n74_A 3-ketoacyl-(acyl-carrie 31.8 1.7E+02 0.0057 24.4 7.7 34 72-111 7-40 (261)
384 4a8t_A Putrescine carbamoyltra 31.7 2.1E+02 0.0074 26.9 9.2 78 72-158 173-250 (339)
385 2rjo_A Twin-arginine transloca 31.7 1.6E+02 0.0054 25.3 7.7 38 74-111 5-42 (332)
386 1y1p_A ARII, aldehyde reductas 31.6 88 0.003 26.6 6.0 82 69-161 6-94 (342)
387 3tpf_A Otcase, ornithine carba 31.5 1.7E+02 0.0058 27.1 8.3 80 72-159 143-223 (307)
388 3clk_A Transcription regulator 31.4 1.7E+02 0.0058 24.4 7.7 38 73-110 7-44 (290)
389 1ff9_A Saccharopine reductase; 31.4 58 0.002 31.0 5.3 73 72-160 1-78 (450)
390 3cg0_A Response regulator rece 31.3 1.2E+02 0.004 21.9 5.9 32 74-111 9-40 (140)
391 2yfk_A Aspartate/ornithine car 31.3 2.6E+02 0.009 27.1 9.9 87 72-161 186-274 (418)
392 3h7a_A Short chain dehydrogena 31.3 2.1E+02 0.0072 24.0 8.4 78 72-160 5-93 (252)
393 2ab0_A YAJL; DJ-1/THIJ superfa 31.3 1.4E+02 0.0048 24.7 7.1 74 74-159 2-75 (205)
394 3u5t_A 3-oxoacyl-[acyl-carrier 30.9 1.1E+02 0.0038 26.2 6.6 65 92-160 39-115 (267)
395 1fsg_A HGPRTASE, hypoxanthine- 30.9 62 0.0021 28.2 5.0 37 69-108 137-173 (233)
396 2z1n_A Dehydrogenase; reductas 30.7 1.8E+02 0.006 24.4 7.7 35 72-112 5-39 (260)
397 4imr_A 3-oxoacyl-(acyl-carrier 30.7 2.6E+02 0.0087 24.0 9.2 78 72-160 31-119 (275)
398 3jx9_A Putative phosphoheptose 30.7 50 0.0017 28.1 4.3 39 70-112 74-112 (170)
399 3k4h_A Putative transcriptiona 30.6 2.3E+02 0.0078 23.4 9.2 38 74-111 8-50 (292)
400 2z5l_A Tylkr1, tylactone synth 30.6 2.2E+02 0.0076 27.5 9.3 85 70-161 255-346 (511)
401 3kht_A Response regulator; PSI 30.5 1.4E+02 0.0047 21.9 6.3 34 72-111 3-36 (144)
402 1vb5_A Translation initiation 30.5 2.2E+02 0.0077 25.5 8.8 82 67-157 102-184 (276)
403 2ywl_A Thioredoxin reductase r 30.5 1.2E+02 0.0041 23.6 6.2 78 88-166 8-114 (180)
404 2iks_A DNA-binding transcripti 30.4 2.1E+02 0.0071 23.8 8.1 40 73-112 19-58 (293)
405 2xhz_A KDSD, YRBH, arabinose 5 30.4 75 0.0026 25.3 5.1 39 73-115 96-134 (183)
406 1o13_A Probable NIFB protein; 30.3 36 0.0012 27.4 3.1 37 95-139 67-103 (136)
407 3ttv_A Catalase HPII; heme ori 30.3 85 0.0029 33.0 6.6 74 70-158 596-669 (753)
408 2h3h_A Sugar ABC transporter, 30.2 1.9E+02 0.0065 24.4 7.9 17 262-279 202-218 (313)
409 1eo1_A Hypothetical protein MT 30.2 47 0.0016 25.7 3.7 37 95-139 56-92 (124)
410 1rdu_A Conserved hypothetical 30.1 40 0.0014 25.7 3.3 37 95-139 53-89 (116)
411 3tnl_A Shikimate dehydrogenase 30.1 2.5E+02 0.0084 25.8 9.1 80 72-160 152-236 (315)
412 3qlj_A Short chain dehydrogena 30.0 2.8E+02 0.0096 24.2 9.3 89 67-161 20-125 (322)
413 1xq1_A Putative tropinone redu 30.0 2.4E+02 0.0081 23.4 9.0 78 72-160 12-102 (266)
414 1z7e_A Protein aRNA; rossmann 30.0 1.3E+02 0.0046 29.3 7.7 74 75-156 2-81 (660)
415 1duv_G Octase-1, ornithine tra 30.0 1.3E+02 0.0044 28.3 7.3 81 72-161 153-235 (333)
416 4dad_A Putative pilus assembly 30.0 78 0.0027 23.3 4.8 37 69-111 15-52 (146)
417 3tpc_A Short chain alcohol deh 29.8 1.9E+02 0.0066 24.1 7.8 36 72-113 5-40 (257)
418 3i1j_A Oxidoreductase, short c 29.8 2.3E+02 0.0079 23.2 8.8 81 70-161 10-105 (247)
419 1sqs_A Conserved hypothetical 29.8 2E+02 0.0067 24.3 7.9 83 76-160 3-89 (242)
420 1s96_A Guanylate kinase, GMP k 29.7 1E+02 0.0034 26.3 6.1 70 74-159 108-183 (219)
421 3kcq_A Phosphoribosylglycinami 29.7 1.3E+02 0.0044 26.4 6.8 71 75-157 10-89 (215)
422 1xfi_A Unknown protein; struct 29.7 1.9E+02 0.0066 27.3 8.5 43 75-121 213-257 (367)
423 3kvo_A Hydroxysteroid dehydrog 29.6 3E+02 0.01 24.8 9.6 83 71-160 42-139 (346)
424 3grk_A Enoyl-(acyl-carrier-pro 29.4 96 0.0033 27.0 6.0 40 68-111 25-64 (293)
425 1pvv_A Otcase, ornithine carba 29.4 2.2E+02 0.0076 26.3 8.7 79 72-160 153-233 (315)
426 3zqu_A Probable aromatic acid 29.3 77 0.0026 27.8 5.3 40 73-115 3-42 (209)
427 3sxp_A ADP-L-glycero-D-mannohe 29.3 1.7E+02 0.0059 25.5 7.7 37 72-114 8-46 (362)
428 2z1k_A (NEO)pullulanase; hydro 29.2 1.8E+02 0.0062 27.0 8.2 47 93-139 52-116 (475)
429 2x4k_A 4-oxalocrotonate tautom 29.2 1.1E+02 0.0036 20.0 4.9 32 238-274 13-44 (63)
430 1dxh_A Ornithine carbamoyltran 29.1 2.1E+02 0.0073 26.8 8.6 81 72-161 153-235 (335)
431 4f82_A Thioredoxin reductase; 29.0 1.2E+02 0.0042 25.6 6.4 45 70-114 43-93 (176)
432 3ghy_A Ketopantoate reductase 28.8 71 0.0024 28.5 5.1 80 73-171 2-89 (335)
433 3fxa_A SIS domain protein; str 28.8 71 0.0024 26.1 4.8 38 74-115 93-130 (201)
434 2cwd_A Low molecular weight ph 28.7 1.5E+02 0.0052 24.2 6.8 89 74-166 4-99 (161)
435 3etn_A Putative phosphosugar i 28.6 1.2E+02 0.0041 25.6 6.3 39 73-115 106-146 (220)
436 3h2s_A Putative NADH-flavin re 28.6 91 0.0031 25.0 5.3 59 92-160 12-72 (224)
437 2fn9_A Ribose ABC transporter, 28.6 2.5E+02 0.0085 23.2 9.3 38 75-112 3-40 (290)
438 3zss_A Putative glucanohydrola 28.5 1.8E+02 0.0062 29.6 8.6 156 92-285 254-452 (695)
439 1w30_A PYRR bifunctional prote 28.4 52 0.0018 28.0 4.0 33 71-106 109-142 (201)
440 4e08_A DJ-1 beta; flavodoxin-l 28.4 1.7E+02 0.0056 23.8 7.0 71 74-158 5-75 (190)
441 2yva_A DNAA initiator-associat 28.4 66 0.0022 26.0 4.5 38 74-115 110-147 (196)
442 1wzl_A Alpha-amylase II; pullu 28.4 1.5E+02 0.0053 28.7 7.8 47 93-139 175-239 (585)
443 2jbh_A Phosphoribosyltransfera 28.4 77 0.0026 27.3 5.1 36 70-108 130-165 (225)
444 2qr3_A Two-component system re 28.3 82 0.0028 22.8 4.6 33 72-110 1-33 (140)
445 1uiz_A MIF, macrophage migrati 28.3 55 0.0019 24.8 3.8 32 239-275 68-99 (115)
446 3rht_A (gatase1)-like protein; 28.3 63 0.0021 29.1 4.7 35 75-113 5-39 (259)
447 1hdc_A 3-alpha, 20 beta-hydrox 28.2 1.8E+02 0.0062 24.4 7.4 35 72-112 3-37 (254)
448 1hfo_A Migration inhibitory fa 28.0 57 0.0019 24.6 3.8 32 239-275 67-98 (113)
449 3ak4_A NADH-dependent quinucli 27.9 2E+02 0.007 24.0 7.6 35 72-112 10-44 (263)
450 3l4b_C TRKA K+ channel protien 27.9 1.5E+02 0.0053 24.3 6.8 59 92-159 11-74 (218)
451 4hcj_A THIJ/PFPI domain protei 27.9 48 0.0017 27.7 3.7 55 91-157 22-76 (177)
452 1m3s_A Hypothetical protein YC 27.9 93 0.0032 24.9 5.3 39 73-115 79-117 (186)
453 3c1o_A Eugenol synthase; pheny 27.8 2.7E+02 0.0094 23.6 8.5 67 93-160 17-87 (321)
454 1tjy_A Sugar transport protein 27.6 1.9E+02 0.0064 24.8 7.5 31 148-183 58-91 (316)
455 3sx6_A Sulfide-quinone reducta 27.6 1.1E+02 0.0037 28.1 6.2 66 74-139 149-228 (437)
456 2d1y_A Hypothetical protein TT 27.6 1.9E+02 0.0065 24.2 7.4 36 72-113 4-39 (256)
457 1shu_X Anthrax toxin receptor 27.6 1.1E+02 0.0039 23.7 5.6 37 75-111 105-141 (182)
458 3hvu_A Hypoxanthine phosphorib 27.5 62 0.0021 28.0 4.4 35 71-108 113-147 (204)
459 1x92_A APC5045, phosphoheptose 27.4 70 0.0024 26.0 4.5 39 73-115 113-151 (199)
460 2gkg_A Response regulator homo 27.4 73 0.0025 22.4 4.1 32 72-109 3-34 (127)
461 3tfo_A Putative 3-oxoacyl-(acy 27.3 2.9E+02 0.01 23.6 8.8 78 72-160 2-91 (264)
462 3brq_A HTH-type transcriptiona 27.2 2.6E+02 0.0088 22.9 10.1 39 73-111 18-58 (296)
463 2hk9_A Shikimate dehydrogenase 27.1 42 0.0014 29.4 3.3 70 72-161 127-197 (275)
464 3m2p_A UDP-N-acetylglucosamine 27.1 2.7E+02 0.0092 23.6 8.3 68 74-160 2-72 (311)
465 3da8_A Probable 5'-phosphoribo 27.1 1.6E+02 0.0055 25.8 7.0 81 75-168 14-110 (215)
466 2q1s_A Putative nucleotide sug 26.9 91 0.0031 27.6 5.5 79 70-161 28-110 (377)
467 1m6i_A Programmed cell death p 26.6 1.2E+02 0.0041 28.5 6.5 88 74-168 180-290 (493)
468 4a5l_A Thioredoxin reductase; 26.6 1.4E+02 0.0048 25.0 6.4 35 72-113 150-184 (314)
469 2o8n_A APOA-I binding protein; 26.5 1.3E+02 0.0046 27.1 6.6 76 75-156 80-156 (265)
470 2lci_A Protein OR36; structura 26.5 1.3E+02 0.0046 24.6 5.9 57 75-140 52-108 (134)
471 3sx2_A Putative 3-ketoacyl-(ac 26.5 2.9E+02 0.0099 23.2 10.4 38 70-113 9-46 (278)
472 2qjw_A Uncharacterized protein 26.5 93 0.0032 23.2 4.7 38 74-111 3-40 (176)
473 4ekn_B Aspartate carbamoyltran 26.5 1.9E+02 0.0065 26.7 7.7 77 72-159 149-227 (306)
474 3t7c_A Carveol dehydrogenase; 26.5 3.1E+02 0.011 23.6 10.5 85 71-161 25-128 (299)
475 2g8l_A 287AA long hypothetical 26.4 2.9E+02 0.0099 25.3 8.9 81 74-161 160-256 (299)
476 2wc7_A Alpha amylase, catalyti 26.4 1.5E+02 0.0052 27.8 7.1 64 93-169 58-139 (488)
477 3l9w_A Glutathione-regulated p 26.3 1.5E+02 0.005 28.0 7.0 69 75-159 5-77 (413)
478 3tdn_A FLR symmetric alpha-bet 26.3 86 0.0029 26.7 5.0 78 91-169 35-122 (247)
479 2os5_A Acemif; macrophage migr 26.2 63 0.0021 24.8 3.8 32 239-275 68-99 (119)
480 2o20_A Catabolite control prot 26.2 3.1E+02 0.011 23.5 9.2 40 73-112 62-101 (332)
481 3ggo_A Prephenate dehydrogenas 26.2 1.1E+02 0.0037 27.6 5.9 67 75-161 34-105 (314)
482 1hyu_A AHPF, alkyl hydroperoxi 26.2 96 0.0033 29.5 5.8 58 72-139 353-411 (521)
483 2pd4_A Enoyl-[acyl-carrier-pro 26.2 2.5E+02 0.0086 23.7 8.0 38 72-113 4-41 (275)
484 4dim_A Phosphoribosylglycinami 26.2 1.6E+02 0.0054 26.4 7.0 34 72-112 5-38 (403)
485 3qk7_A Transcriptional regulat 26.0 2.9E+02 0.0099 23.1 9.7 22 92-113 28-49 (294)
486 1wyz_A Putative S-adenosylmeth 26.0 46 0.0016 28.8 3.3 34 74-111 83-119 (242)
487 2z1m_A GDP-D-mannose dehydrata 26.0 92 0.0031 26.5 5.1 36 72-113 1-36 (345)
488 3ohp_A Hypoxanthine phosphorib 26.0 73 0.0025 26.6 4.4 34 71-107 88-121 (177)
489 3cky_A 2-hydroxymethyl glutara 25.9 1.4E+02 0.0049 25.5 6.4 66 74-159 4-69 (301)
490 2jah_A Clavulanic acid dehydro 25.8 2.9E+02 0.0098 23.0 9.6 78 72-160 5-94 (247)
491 2j48_A Two-component sensor ki 25.7 1.2E+02 0.0041 20.7 4.9 30 74-109 1-30 (119)
492 3lou_A Formyltetrahydrofolate 25.6 3.1E+02 0.011 25.0 8.9 69 75-157 97-178 (292)
493 1edo_A Beta-keto acyl carrier 25.6 1E+02 0.0036 25.1 5.2 66 92-161 13-90 (244)
494 4eso_A Putative oxidoreductase 25.5 1.8E+02 0.0061 24.6 6.9 35 72-112 6-40 (255)
495 4dqx_A Probable oxidoreductase 25.5 2.3E+02 0.008 24.3 7.7 35 72-112 25-59 (277)
496 3b64_A Macrophage migration in 25.4 56 0.0019 24.7 3.3 32 239-275 68-99 (112)
497 1j0h_A Neopullulanase; beta-al 25.4 1.7E+02 0.0059 28.4 7.5 47 93-139 178-242 (588)
498 3fr7_A Putative ketol-acid red 25.3 57 0.0019 33.0 4.1 102 68-187 47-157 (525)
499 2dtx_A Glucose 1-dehydrogenase 25.2 3E+02 0.01 23.3 8.3 36 72-113 6-41 (264)
500 3zv4_A CIS-2,3-dihydrobiphenyl 25.2 2E+02 0.0068 24.7 7.2 34 72-111 3-36 (281)
No 1
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.78 E-value=1.3e-08 Score=89.18 Aligned_cols=184 Identities=13% Similarity=0.076 Sum_probs=118.6
Q ss_pred ccccEEEEEeccCC--CCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHH-HHcCCceeehhc-------
Q 022363 72 MKSKLVLLVSHELS--LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKM-WDRGVQVISAKG------- 141 (298)
Q Consensus 72 ~~~KkILLISHELS--~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kl-l~rgI~v~~~k~------- 141 (298)
|+.+||++|++... ..|+...+.++++.| .|++|.+++...+. . ..+.+ ...+++++.-..
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNA---E----EAHAYDKTLDYEVIRWPRSVMLPTP 72 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSH---H----HHHHHHTTCSSEEEEESSSSCCSCH
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCc---c----chhhhccccceEEEEccccccccch
Confidence 45678999999776 789999999999999 59999999966542 1 01222 344777765321
Q ss_pred --hhHHH---hhhccCEEEEechhchHHHHHHhhccCCCCCCceEEEeeeccccccc-----------cccccccccccc
Q 022363 142 --QETIN---TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK-----------LDYVKHLPLVAG 205 (298)
Q Consensus 142 --~~~i~---~A~~aDLVIaNT~v~g~wl~~l~~~~~p~~~~pVIWWIHE~r~~Yf~-----------l~~vkhLp~v~~ 205 (298)
...+. ...++|+|++++.....++..+.+.. ..+++|+++|...-.+.. +.+..++.++
T Consensus 73 ~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~---~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~-- 147 (394)
T 3okp_A 73 TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQA---GASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYI-- 147 (394)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHT---TCSEEEEECCSTHHHHTTSHHHHHHHHHHHHHCSEEEES--
T ss_pred hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhc---CCCcEEEEeccchhhhhhcchhhHHHHHHHHhCCEEEEc--
Confidence 11121 24589999998876555555443221 345699999975421111 2344555566
Q ss_pred cccccHHHHHHHHHhcccccccccCCceEEEecCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEEecccChhh
Q 022363 206 AMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSMNFLL 283 (298)
Q Consensus 206 ~~~~S~AtA~yw~~r~~~~~~Ikl~~~~vv~L~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~~~sv~~~~ 283 (298)
|+.+++++.+.+....++.+ ++-+...+... ... ...++.+|+++|++++..+|+.+..+++.|
T Consensus 148 ----s~~~~~~~~~~~~~~~~~~v-----i~ngv~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K 211 (394)
T 3okp_A 148 ----SQYTLRRFKSAFGSHPTFEH-----LPSGVDVKRFT----PAT-PEDKSATRKKLGFTDTTPVIACNSRLVPRK 211 (394)
T ss_dssp ----CHHHHHHHHHHHCSSSEEEE-----CCCCBCTTTSC----CCC-HHHHHHHHHHTTCCTTCCEEEEESCSCGGG
T ss_pred ----CHHHHHHHHHhcCCCCCeEE-----ecCCcCHHHcC----CCC-chhhHHHHHhcCCCcCceEEEEEecccccc
Confidence 99999999998864344443 44443332211 000 124677899999999999999999998766
No 2
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.76 E-value=4.2e-08 Score=87.02 Aligned_cols=193 Identities=14% Similarity=0.054 Sum_probs=111.4
Q ss_pred cccEEEEEecc---CCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhh-----------hHHHHHHcCCceee
Q 022363 73 KSKLVLLVSHE---LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYS-----------LEHKMWDRGVQVIS 138 (298)
Q Consensus 73 ~~KkILLISHE---LS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~-----------L~~kll~rgI~v~~ 138 (298)
|..|||+|+++ ....|+...+.+||+.|.+.|++|.+++...+...+..... +.++ ...|+++..
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gv~v~~ 79 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYE-ERGNLRIYR 79 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEE-EETTEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeec-cCCCceEEE
Confidence 34689999999 56689999999999999999999999995544321110000 0000 112444332
Q ss_pred hhc----------------h-----------hHHHh----hhccCEEEEechhchHHHHHHhh-ccCCCCCCceEEEeee
Q 022363 139 AKG----------------Q-----------ETINT----ALKADLIVLNTAVAGKWLDAVLK-EDVPRVLPNVLWWIHE 186 (298)
Q Consensus 139 ~k~----------------~-----------~~i~~----A~~aDLVIaNT~v~g~wl~~l~~-~~~p~~~~pVIWWIHE 186 (298)
-.. . +.++. ..++|+|++++...+-....+.+ .+. |+|+++|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~-----~~v~~~h~ 154 (439)
T 3fro_A 80 IGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKI-----PAVFTIHR 154 (439)
T ss_dssp EESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCC-----CEEEEESC
T ss_pred ecchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCC-----CEEEEecc
Confidence 100 0 01111 23899999998655322222211 233 99999999
Q ss_pred cccccc----------------c--------cccccccccccccccccHHHHHHHHHhcc-cccccccCCceEEEecCcH
Q 022363 187 MRGHYF----------------K--------LDYVKHLPLVAGAMIDSHVTAEYWKNRTR-ERLRIKMPDTYVVHLGNSK 241 (298)
Q Consensus 187 ~r~~Yf----------------~--------l~~vkhLp~v~~~~~~S~AtA~yw~~r~~-~~~~Ikl~~~~vv~L~~s~ 241 (298)
.....+ . +.+..++.++ |+..+++.....+ +..+|.+ ++-+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~------S~~~~~~~~~~~~~~~~~i~v-----i~ngvd~ 223 (439)
T 3fro_A 155 LNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTV------SRGYLIDEWGFFRNFEGKITY-----VFNGIDC 223 (439)
T ss_dssp CCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEES------CHHHHHHTHHHHGGGTTSEEE-----CCCCCCT
T ss_pred cccccCchHHhCccccccccccceeeHhhhhhhhccEEEec------CHHHHHHHhhhhhhcCCceee-----cCCCCCc
Confidence 853211 0 1233344555 9999998555443 3334443 5444433
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEEecccC-hhh
Q 022363 242 ELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSMN-FLL 283 (298)
Q Consensus 242 ~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~~~sv~-~~~ 283 (298)
+...-......+...++.+|+++|++++ .+|+.+..++ +.|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~K 265 (439)
T 3fro_A 224 SFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQK 265 (439)
T ss_dssp TTSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTB
T ss_pred hhcCcccccchhhhhHHHHHHHcCCCCC-cEEEEEcccccccc
Confidence 3221000000122367889999999988 9999999998 654
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.56 E-value=1e-07 Score=85.74 Aligned_cols=182 Identities=17% Similarity=0.165 Sum_probs=105.8
Q ss_pred cEEEEEeccCC---------CCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh-----
Q 022363 75 KLVLLVSHELS---------LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK----- 140 (298)
Q Consensus 75 KkILLISHELS---------~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k----- 140 (298)
+||++|+++.. ..|+...+.+|++.|.+.|++|.+++...+...... .....|+.+..-.
T Consensus 21 mkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~------~~~~~~v~v~~~~~~~~~ 94 (438)
T 3c48_A 21 MRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEI------VRVAENLRVINIAAGPYE 94 (438)
T ss_dssp CEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSE------EEEETTEEEEEECCSCSS
T ss_pred heeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCccc------ccccCCeEEEEecCCCcc
Confidence 58999999763 468899999999999999999999996543210000 0001233332110
Q ss_pred ---------chh----H-----HHhhhccCEEEEechhchHHHHHHhh-ccCCCCCCceEEEeeeccc---cccc-----
Q 022363 141 ---------GQE----T-----INTALKADLIVLNTAVAGKWLDAVLK-EDVPRVLPNVLWWIHEMRG---HYFK----- 193 (298)
Q Consensus 141 ---------~~~----~-----i~~A~~aDLVIaNT~v~g~wl~~l~~-~~~p~~~~pVIWWIHE~r~---~Yf~----- 193 (298)
... . ++...++|+|++++...+.+...+.+ .+. |+|+++|+... .+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~-----p~v~~~h~~~~~~~~~~~~~~~~ 169 (438)
T 3c48_A 95 GLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRI-----PLIHTAHTLAAVKNSYRDDSDTP 169 (438)
T ss_dssp SCCGGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTC-----CEEEECSSCHHHHSCC----CCH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCC-----CEEEEecCCcccccccccccCCc
Confidence 000 1 11112599999997543322211211 133 99999999741 1110
Q ss_pred ------------cccccccccccccccccHHHHHHHHHhcc-cccccccCCceEEEecCcHHHHHHHHHHHHHHHhhHHH
Q 022363 194 ------------LDYVKHLPLVAGAMIDSHVTAEYWKNRTR-ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHV 260 (298)
Q Consensus 194 ------------l~~vkhLp~v~~~~~~S~AtA~yw~~r~~-~~~~Ikl~~~~vv~L~~s~~L~~~a~~~va~~~lre~V 260 (298)
+++.+++ +..|+.+++++.+.++ +..+|.+ ++-+...+... ...+ ..++..
T Consensus 170 ~~~~~~~~~~~~~~~~d~i------i~~s~~~~~~~~~~~g~~~~k~~v-----i~ngvd~~~~~----~~~~-~~~~~~ 233 (438)
T 3c48_A 170 ESEARRICEQQLVDNADVL------AVNTQEEMQDLMHHYDADPDRISV-----VSPGADVELYS----PGND-RATERS 233 (438)
T ss_dssp HHHHHHHHHHHHHHHCSEE------EESSHHHHHHHHHHHCCCGGGEEE-----CCCCCCTTTSC----CC-----CHHH
T ss_pred chHHHHHHHHHHHhcCCEE------EEcCHHHHHHHHHHhCCChhheEE-----ecCCccccccC----Cccc-chhhhh
Confidence 1223334 4449999999998776 4445543 44443332211 0011 134558
Q ss_pred HHHhCCCCCCEEEEEecccChhh
Q 022363 261 RESLGVRNEDLLFAIINSMNFLL 283 (298)
Q Consensus 261 R~~lGl~~ddvlv~~~~sv~~~~ 283 (298)
|+++|++++..+|+.+..+.+.|
T Consensus 234 r~~~~~~~~~~~i~~~G~~~~~K 256 (438)
T 3c48_A 234 RRELGIPLHTKVVAFVGRLQPFK 256 (438)
T ss_dssp HHHTTCCSSSEEEEEESCBSGGG
T ss_pred HHhcCCCCCCcEEEEEeeecccC
Confidence 89999999999999999988865
No 4
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.42 E-value=5.9e-07 Score=80.71 Aligned_cols=191 Identities=12% Similarity=0.179 Sum_probs=103.1
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH--cCCcee--ehhchhH-
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD--RGVQVI--SAKGQET- 144 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~--rgI~v~--~~k~~~~- 144 (298)
.-|+++||++|++.....|+...+.+|++.|++.|++|.+++..+++ .. +.+.+.+.. .|.+.+ .......
T Consensus 36 ~~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (416)
T 2x6q_A 36 EKLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPT---EF-FNVTKTFHNALQGNESLKLTEEMKELY 111 (416)
T ss_dssp HTTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCH---HH-HHHHHHHHHHHTTCCSCCCCHHHHHHH
T ss_pred hhhhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCc---ch-hhhhcccceeecccccccccHHHHHHH
Confidence 34678899999999988899999999999999999999998855431 11 111222211 132121 1111111
Q ss_pred ------H-H--hhhccCEEEEechhchHHHHHHhhccCCCCCCceEEEeeeccccccc--cccccc-cccccccc-cccH
Q 022363 145 ------I-N--TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK--LDYVKH-LPLVAGAM-IDSH 211 (298)
Q Consensus 145 ------i-~--~A~~aDLVIaNT~v~g~wl~~l~~~~~p~~~~pVIWWIHE~r~~Yf~--l~~vkh-Lp~v~~~~-~~S~ 211 (298)
+ + ...++|+|++++.....+.. +. ... .|+|+++|+....+.. ....+. +.....++ ..|+
T Consensus 112 ~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~-~~----~~~-~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 185 (416)
T 2x6q_A 112 LNVNRENSKFIDLSSFDYVLVHDPQPAALIE-FY----EKK-SPWLWRCHIDLSSPNREFWEFLRRFVEKYDRYIFHLPE 185 (416)
T ss_dssp HHHHHHHHHSSCGGGSSEEEEESSTTGGGGG-GS----CCC-SCEEEECCSCCSSCCHHHHHHHHHHHTTSSEEEESSGG
T ss_pred HHHHHHHHHHHhhcCCCEEEEeccchhhHHH-HH----Hhc-CCEEEEEccccCCccHHHHHHHHHHHHhCCEEEEechH
Confidence 1 1 12389999999865544432 22 112 4999999986422111 000111 11111111 2254
Q ss_pred HHHHHHHHhcccccccccCCceEEEecCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEEecccChhh
Q 022363 212 VTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSMNFLL 283 (298)
Q Consensus 212 AtA~yw~~r~~~~~~Ikl~~~~vv~L~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~~~sv~~~~ 283 (298)
...++ .++ .+ ..|++-+....-.. ...... ..++.+|+++|+++++.+|+.+..++|.|
T Consensus 186 ~~~~~----~~~-~~-----~~vi~ngvd~~~~~--~~~~~~-~~~~~~r~~~~~~~~~~~i~~vGrl~~~K 244 (416)
T 2x6q_A 186 YVQPE----LDR-NK-----AVIMPPSIDPLSEK--NVELKQ-TEILRILERFDVDPEKPIITQVSRFDPWK 244 (416)
T ss_dssp GSCTT----SCT-TT-----EEECCCCBCTTSTT--TSCCCH-HHHHHHHHHTTCCTTSCEEEEECCCCTTS
T ss_pred HHHhh----CCc-cc-----eEEeCCCCChhhhc--ccccCh-hhHHHHHHHhCCCCCCcEEEEEecccccc
Confidence 43332 111 12 22344333221100 000001 13566889999999999999998888754
No 5
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.37 E-value=1.6e-07 Score=87.07 Aligned_cols=188 Identities=12% Similarity=0.115 Sum_probs=109.4
Q ss_pred cEEEEEeccC-------------CCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCc-hhhhhhhHHHH-HHcCCceeeh
Q 022363 75 KLVLLVSHEL-------------SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE-DEVIYSLEHKM-WDRGVQVISA 139 (298)
Q Consensus 75 KkILLISHEL-------------S~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~-g~v~~~L~~kl-l~rgI~v~~~ 139 (298)
+||++|++.. +..|+...+.+|++.|.+.|++|.+++...++.. ......++ ++ ...|+++..-
T Consensus 8 MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~gv~v~~~ 86 (499)
T 2r60_A 8 KHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEID-YYQETNKVRIVRI 86 (499)
T ss_dssp CEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEE-ECTTCSSEEEEEE
T ss_pred ceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHH-hccCCCCeEEEEe
Confidence 6899999864 5678899999999999999999999996543211 11000000 00 0235555421
Q ss_pred h--------------ch----hHH-Hhh----hccCEEEEechhchHHHHHHhh-ccCCCCCCceEEEeeecccccc---
Q 022363 140 K--------------GQ----ETI-NTA----LKADLIVLNTAVAGKWLDAVLK-EDVPRVLPNVLWWIHEMRGHYF--- 192 (298)
Q Consensus 140 k--------------~~----~~i-~~A----~~aDLVIaNT~v~g~wl~~l~~-~~~p~~~~pVIWWIHE~r~~Yf--- 192 (298)
. .. ..+ +.. .++|+|.+++...+.+...+.+ .++ |+|+++|+....+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~-----p~v~~~H~~~~~~~~~~ 161 (499)
T 2r60_A 87 PFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGL-----PFTFTGHSLGAQKMEKL 161 (499)
T ss_dssp CCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCC-----CEEEECSSCHHHHHHTT
T ss_pred cCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCC-----cEEEEccCcccccchhh
Confidence 0 00 111 111 3799999998653322221211 133 89999999641100
Q ss_pred -----------------------c--cccccccccccccccccHHHHHHHHHh--cc------cccccccCCceEEEecC
Q 022363 193 -----------------------K--LDYVKHLPLVAGAMIDSHVTAEYWKNR--TR------ERLRIKMPDTYVVHLGN 239 (298)
Q Consensus 193 -----------------------~--l~~vkhLp~v~~~~~~S~AtA~yw~~r--~~------~~~~Ikl~~~~vv~L~~ 239 (298)
. +++.+++.++ |+.+++++.+. ++ ++.++.+ ++-+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~------S~~~~~~~~~~~~~g~~~~~~~~~ki~v-----i~ngv 230 (499)
T 2r60_A 162 NVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVS------TSQERFGQYSHDLYRGAVNVEDDDKFSV-----IPPGV 230 (499)
T ss_dssp CCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEES------SHHHHHHTTTSGGGTTTCCTTCGGGEEE-----CCCCB
T ss_pred ccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEEC------CHHHHHHHHhhhcccccccccCCCCeEE-----ECCCc
Confidence 0 1223334444 99999998877 54 3334443 55444
Q ss_pred cHHHHHHHHHHHHHHHhhHHHHHHhC-----CCCCCEEEEEecccChhh
Q 022363 240 SKELMEVAEDNVAKRVLREHVRESLG-----VRNEDLLFAIINSMNFLL 283 (298)
Q Consensus 240 s~~L~~~a~~~va~~~lre~VR~~lG-----l~~ddvlv~~~~sv~~~~ 283 (298)
..+... ...+...|+.+|+++| ++++..+|+.+..+.|.|
T Consensus 231 d~~~~~----~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~K 275 (499)
T 2r60_A 231 NTRVFD----GEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKK 275 (499)
T ss_dssp CTTTSS----SCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGG
T ss_pred ChhhcC----ccchhhhHHHHHHHhcccccccCCCCcEEEEeecCcccc
Confidence 332211 0000113567889999 999999999999998865
No 6
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.24 E-value=1.1e-06 Score=80.89 Aligned_cols=40 Identities=23% Similarity=0.169 Sum_probs=35.1
Q ss_pred cEEEEEeccC----CCCCchHHHHHHHHHHHhCCCeEEEEeccC
Q 022363 75 KLVLLVSHEL----SLSGGPLLLMELAFLLRGVGTKVNWITIQK 114 (298)
Q Consensus 75 KkILLISHEL----S~TGAPLlLleLA~~Lkq~G~~V~vL~~~~ 114 (298)
+||++|+++. ...|+...+.+|++.|.+.|++|.+++...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 3799999988 357899999999999999999999999543
No 7
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.18 E-value=4.9e-07 Score=78.94 Aligned_cols=177 Identities=12% Similarity=0.034 Sum_probs=101.1
Q ss_pred EEEEEeccC-CCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh------------ch
Q 022363 76 LVLLVSHEL-SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK------------GQ 142 (298)
Q Consensus 76 kILLISHEL-S~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k------------~~ 142 (298)
||++|+++. ...|+...+.++++.|.+.|++|.+++...++. . ..|+++..-. ..
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~---~---------~~~~~v~~~~~~~~~~~~~~~~~~ 69 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGD---C---------PKAFELIQVPVKSHTNHGRNAEYY 69 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSC---C---------CTTCEEEECCCCCSSHHHHHHHHH
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCC---C---------CCCcEEEEEccCcccchhhHHHHH
Confidence 699999984 557889999999999999999999999553211 0 0133333110 00
Q ss_pred hHHH---hhhccCEEEEechhchHHHHHHhhccCCCCCCceEEEeeeccccccc--------------cccccccccccc
Q 022363 143 ETIN---TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK--------------LDYVKHLPLVAG 205 (298)
Q Consensus 143 ~~i~---~A~~aDLVIaNT~v~g~wl~~l~~~~~p~~~~pVIWWIHE~r~~Yf~--------------l~~vkhLp~v~~ 205 (298)
..+. ...++|+|+++....+..+... .... ..|.+++.|.....+.. ..+.+++.++
T Consensus 70 ~~l~~~i~~~~~Dvv~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~-- 143 (374)
T 2iw1_A 70 AWVQNHLKEHPADRVVGFNKMPGLDVYFA---ADVC-YAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMML-- 143 (374)
T ss_dssp HHHHHHHHHSCCSEEEESSCCTTCSEEEC---CSCC-HHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEES--
T ss_pred HHHHHHHhccCCCEEEEecCCCCceeeec---cccc-cceeeeecccchhhhcHHHHHHHHHHHHHhhccCCcEEEEc--
Confidence 1111 2348999998764221100000 0000 01333333432211110 1123445555
Q ss_pred cccccHHHHHHHHHhcc-cccccccCCceEEEecCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEEecccChhh
Q 022363 206 AMIDSHVTAEYWKNRTR-ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSMNFLL 283 (298)
Q Consensus 206 ~~~~S~AtA~yw~~r~~-~~~~Ikl~~~~vv~L~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~~~sv~~~~ 283 (298)
|+.+++++.+.++ +..++.+ ++-+...+... .......|+.+|+++|++++..+|+.+..+.+.|
T Consensus 144 ----s~~~~~~~~~~~~~~~~~~~v-----i~ngv~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K 209 (374)
T 2iw1_A 144 ----TDKQIADFQKHYQTEPERFQI-----LPPGIYPDRKY----SEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRK 209 (374)
T ss_dssp ----CHHHHHHHHHHHCCCGGGEEE-----CCCCCCGGGSG----GGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTT
T ss_pred ----CHHHHHHHHHHhCCChhheEE-----ecCCcCHHhcC----cccchhHHHHHHHHhCCCCCCeEEEEeccchhhc
Confidence 9999999998876 4444543 44443333222 1111124567899999999999999999988864
No 8
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.16 E-value=4.6e-06 Score=76.68 Aligned_cols=40 Identities=18% Similarity=0.050 Sum_probs=35.1
Q ss_pred cEEEEEeccC----CCCCchHHHHHHHHHHHhCCCeEEEEeccC
Q 022363 75 KLVLLVSHEL----SLSGGPLLLMELAFLLRGVGTKVNWITIQK 114 (298)
Q Consensus 75 KkILLISHEL----S~TGAPLlLleLA~~Lkq~G~~V~vL~~~~ 114 (298)
+||++|+++. ...|+...+.+|++.|.+.|++|.+++...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 3799999987 467889999999999999999999999543
No 9
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.11 E-value=7.5e-06 Score=71.61 Aligned_cols=119 Identities=15% Similarity=0.047 Sum_probs=81.1
Q ss_pred ccccEEEEEecc--------------CCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee
Q 022363 72 MKSKLVLLVSHE--------------LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI 137 (298)
Q Consensus 72 ~~~KkILLISHE--------------LS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~ 137 (298)
|+.+||++|++. ....|+...+.++++.|.+.|++|.+++...+... ..+++++
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~------------~~~~~~~ 68 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG------------RPGLTVV 68 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC------------STTEEEC
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC------------CCcceec
Confidence 566899999998 25578999999999999999999999996654321 1345554
Q ss_pred ehhchhHHH---hhhccCEEEEechhchHHHHHHhhccCCCCCCceEEEeeeccccccccccccccccccccccccHHHH
Q 022363 138 SAKGQETIN---TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLDYVKHLPLVAGAMIDSHVTA 214 (298)
Q Consensus 138 ~~k~~~~i~---~A~~aDLVIaNT~v~g~wl~~l~~~~~p~~~~pVIWWIHE~r~~Yf~l~~vkhLp~v~~~~~~S~AtA 214 (298)
.......+. ...++|+|++++...+-+. .. ....| |+++|+....|. +..++.++ |+.++
T Consensus 69 ~~~~~~~l~~~l~~~~~Dvi~~~~~~~~~~~--~~-----~~~~p-v~~~h~~~~~~~---~~d~ii~~------S~~~~ 131 (342)
T 2iuy_A 69 PAGEPEEIERWLRTADVDVVHDHSGGVIGPA--GL-----PPGTA-FISSHHFTTRPV---NPVGCTYS------SRAQR 131 (342)
T ss_dssp SCCSHHHHHHHHHHCCCSEEEECSSSSSCST--TC-----CTTCE-EEEEECSSSBCS---CCTTEEES------CHHHH
T ss_pred cCCcHHHHHHHHHhcCCCEEEECCchhhHHH--Hh-----hcCCC-EEEecCCCCCcc---cceEEEEc------CHHHH
Confidence 432222222 2348999999987644332 11 11238 999999865443 35667777 99999
Q ss_pred HHHHH
Q 022363 215 EYWKN 219 (298)
Q Consensus 215 ~yw~~ 219 (298)
+++.+
T Consensus 132 ~~~~~ 136 (342)
T 2iuy_A 132 AHCGG 136 (342)
T ss_dssp HHTTC
T ss_pred HHHhc
Confidence 99875
No 10
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.07 E-value=3.1e-05 Score=68.29 Aligned_cols=175 Identities=10% Similarity=0.036 Sum_probs=96.1
Q ss_pred cEEEEEeccCC--CCCchHHHHHHHHHHHhCCCeEEEEeccCCCC--c------hhhh-hhhHHHHHHcCCceeehhchh
Q 022363 75 KLVLLVSHELS--LSGGPLLLMELAFLLRGVGTKVNWITIQKPSE--E------DEVI-YSLEHKMWDRGVQVISAKGQE 143 (298)
Q Consensus 75 KkILLISHELS--~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~--~------g~v~-~~L~~kll~rgI~v~~~k~~~ 143 (298)
+||++|++... .+|+...+.++++.|.+.|++|.+++...++. . +.+. .+......+... ......
T Consensus 21 MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 97 (406)
T 2gek_A 21 MRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRF---GPATHR 97 (406)
T ss_dssp CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECCCCC------------C---CHHHHH
T ss_pred ceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCCcEEeccccCCcccccc---cHHHHH
Confidence 57999998753 36888999999999999999999999655431 0 0010 000000000000 000111
Q ss_pred HHH---hhhccCEEEEechhchHHHHHHhh-ccCCCCCCceEEEeeeccccccc-----------ccccccccccccccc
Q 022363 144 TIN---TALKADLIVLNTAVAGKWLDAVLK-EDVPRVLPNVLWWIHEMRGHYFK-----------LDYVKHLPLVAGAMI 208 (298)
Q Consensus 144 ~i~---~A~~aDLVIaNT~v~g~wl~~l~~-~~~p~~~~pVIWWIHE~r~~Yf~-----------l~~vkhLp~v~~~~~ 208 (298)
.+. ...++|+|+++......+...+.+ .+ .|+|+++|+....... +.+..++.++
T Consensus 98 ~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~-----~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~----- 167 (406)
T 2gek_A 98 KVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAE-----GPIVATFHTSTTKSLTLSVFQGILRPYHEKIIGRIAV----- 167 (406)
T ss_dssp HHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEE-----SSEEEEECCCCCSHHHHHHHHSTTHHHHTTCSEEEES-----
T ss_pred HHHHHHHhcCCCEEEECCccchHHHHHHHHhcC-----CCEEEEEcCcchhhhhHHHHHHHHHHHHhhCCEEEEC-----
Confidence 121 234899999998766544222221 13 3999999996422110 2334445555
Q ss_pred ccHHHHHHHHHhcccccccccCCceEEEecCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEEeccc-Chhh
Q 022363 209 DSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSM-NFLL 283 (298)
Q Consensus 209 ~S~AtA~yw~~r~~~~~~Ikl~~~~vv~L~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~~~sv-~~~~ 283 (298)
|+..++++.+.++. .++ + ++-+...+... . ..+..+++++...|+.+..+ .+.|
T Consensus 168 -s~~~~~~~~~~~~~-~~~-v-----i~~~v~~~~~~----------~---~~~~~~~~~~~~~i~~~G~~~~~~K 222 (406)
T 2gek_A 168 -SDLARRWQMEALGS-DAV-E-----IPNGVDVASFA----------D---APLLDGYPREGRTVLFLGRYDEPRK 222 (406)
T ss_dssp -SHHHHHHHHHHHSS-CEE-E-----CCCCBCHHHHH----------T---CCCCTTCSCSSCEEEEESCTTSGGG
T ss_pred -CHHHHHHHHHhcCC-CcE-E-----ecCCCChhhcC----------C---CchhhhccCCCeEEEEEeeeCcccc
Confidence 99999999887653 234 2 34333332222 0 01224555566677777777 5543
No 11
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=97.92 E-value=3.5e-05 Score=68.64 Aligned_cols=170 Identities=12% Similarity=0.085 Sum_probs=95.0
Q ss_pred CCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee----------h-----hchhHHH---
Q 022363 85 SLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS----------A-----KGQETIN--- 146 (298)
Q Consensus 85 S~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~----------~-----k~~~~i~--- 146 (298)
+..|+...+.+|++.|.+.|++|.+++...+.... ....|+.+.. . .....+.
T Consensus 25 ~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 95 (394)
T 2jjm_A 25 SVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN---------KVYPNIYFHEVTVNQYSVFQYPPYDLALASKMAEVA 95 (394)
T ss_dssp --CHHHHHHHHHHHHHHHTTCEEEEECSSCC-------------CCCTTEEEECCCCC----CCSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCccc---------ccCCceEEEecccccccccccccccHHHHHHHHHHH
Confidence 46789999999999999999999999965432100 0011211110 0 0011111
Q ss_pred hhhccCEEEEechhchHHHHHHhhccCCCCCCceEEEeeeccccccc------------cccccccccccccccccHHHH
Q 022363 147 TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK------------LDYVKHLPLVAGAMIDSHVTA 214 (298)
Q Consensus 147 ~A~~aDLVIaNT~v~g~wl~~l~~~~~p~~~~pVIWWIHE~r~~Yf~------------l~~vkhLp~v~~~~~~S~AtA 214 (298)
...++|+|++++.....+...+.+..... ..|+|+++|+..-.++. +++.+++.++ |+.++
T Consensus 96 ~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~-~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~------s~~~~ 168 (394)
T 2jjm_A 96 QRENLDILHVHYAIPHAICAYLAKQMIGE-RIKIVTTLHGTDITVLGSDPSLNNLIRFGIEQSDVVTAV------SHSLI 168 (394)
T ss_dssp HHHTCSEEEECSSTTHHHHHHHHHHHTTT-CSEEEEECCHHHHHTTTTCTTTHHHHHHHHHHSSEEEES------CHHHH
T ss_pred HHcCCCEEEEcchhHHHHHHHHHHHhhcC-CCCEEEEEecCcccccCCCHHHHHHHHHHHhhCCEEEEC------CHHHH
Confidence 24589999999754332222222111111 13999999995421111 2233444555 99999
Q ss_pred HHHHHhcccccccccCCceEEEecCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEEecccChhh
Q 022363 215 EYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSMNFLL 283 (298)
Q Consensus 215 ~yw~~r~~~~~~Ikl~~~~vv~L~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~~~sv~~~~ 283 (298)
+++.+....+.++.+ ++-+...+... . ..++..|+++|++++..+|+.+..+.+.|
T Consensus 169 ~~~~~~~~~~~~~~v-----i~ngv~~~~~~----~----~~~~~~~~~~~~~~~~~~i~~~G~~~~~K 224 (394)
T 2jjm_A 169 NETHELVKPNKDIQT-----VYNFIDERVYF----K----RDMTQLKKEYGISESEKILIHISNFRKVK 224 (394)
T ss_dssp HHHHHHTCCSSCEEE-----CCCCCCTTTCC----C----CCCHHHHHHTTCC---CEEEEECCCCGGG
T ss_pred HHHHHhhCCcccEEE-----ecCCccHHhcC----C----cchHHHHHHcCCCCCCeEEEEeecccccc
Confidence 999988764334443 44443322211 0 12456788999998888898888888765
No 12
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.72 E-value=0.00063 Score=60.79 Aligned_cols=181 Identities=16% Similarity=0.170 Sum_probs=101.0
Q ss_pred cEEEEEeccCCC-CCchHHHHHHHHHHHhCCCeEEEEeccCCC-Cc-hhhh-hhhHHHHHHcCCc--eeehh-chhHHHh
Q 022363 75 KLVLLVSHELSL-SGGPLLLMELAFLLRGVGTKVNWITIQKPS-EE-DEVI-YSLEHKMWDRGVQ--VISAK-GQETINT 147 (298)
Q Consensus 75 KkILLISHELS~-TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~-~~-g~v~-~~L~~kll~rgI~--v~~~k-~~~~i~~ 147 (298)
.||++|+..... +|+.....+|++.|.+. ++|.+++....+ .. .... ++.......+... -+... -.+.+ .
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~ 78 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSVHANIEEFDAQTAEHVRGLNEQGFYYSGLSEFI-D 78 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCSCSSSEEEEHHHHHHHTTCCSTTCCHHHHHHHH-H
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCcccccccccCCccccccccccccccchHHHHHHHH-H
Confidence 368999876654 57889999999999999 999999844331 00 0000 0001100111111 11111 11122 2
Q ss_pred hhccCEEEEechhc--hHHHHHHhhccCCCCCCceEEEeeeccccccc-----cccccccccccccccccHHHHHHHHHh
Q 022363 148 ALKADLIVLNTAVA--GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK-----LDYVKHLPLVAGAMIDSHVTAEYWKNR 220 (298)
Q Consensus 148 A~~aDLVIaNT~v~--g~wl~~l~~~~~p~~~~pVIWWIHE~r~~Yf~-----l~~vkhLp~v~~~~~~S~AtA~yw~~r 220 (298)
..++|+|+++.-.. +.++..+ .++|.. .+++.+.|.....+.. +++.. +.+++..|+.+++++++
T Consensus 79 ~~~~Div~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ii~~S~~~~~~~~~- 150 (413)
T 3oy2_A 79 VHKPDIVMIYNDPIVIGNYLLAM--GKCSHR-TKIVLYVDLVSKNIRENLWWIFSHPK----VVGVMAMSKCWISDICN- 150 (413)
T ss_dssp HHCCSEEEEEECHHHHHHHHHHG--GGCCSC-CEEEEEECCCSBSCCGGGGGGGGCTT----EEEEEESSTHHHHHHHH-
T ss_pred hcCCCEEEEcchHHHHHHHHHHh--ccCCCC-CceeeeccccchhhHHHHHHHHhccC----CceEEEcCHHHHHHHHH-
Confidence 56999999995432 2333333 234433 3778888876533322 22322 11344449999999998
Q ss_pred cccccccccCCceEEEecCcHHHHHHHHHHHHHHHhhHHHHHHhCCCC--CCEEEEEecccChhh
Q 022363 221 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRN--EDLLFAIINSMNFLL 283 (298)
Q Consensus 221 ~~~~~~Ikl~~~~vv~L~~s~~L~~~a~~~va~~~lre~VR~~lGl~~--ddvlv~~~~sv~~~~ 283 (298)
.+.+.++.+ ++-+...+.. +..|+++|+++ +..+|+.+..+.+.|
T Consensus 151 ~~~~~~~~v-----i~ngvd~~~~-------------~~~~~~~~~~~~~~~~~il~vGr~~~~K 197 (413)
T 3oy2_A 151 YGCKVPINI-----VSHFVDTKTI-------------YDARKLVGLSEYNDDVLFLNMNRNTARK 197 (413)
T ss_dssp TTCCSCEEE-----CCCCCCCCCC-------------TTHHHHTTCGGGTTSEEEECCSCSSGGG
T ss_pred cCCCCceEE-----eCCCCCHHHH-------------HHHHHhcCCCcccCceEEEEcCCCchhc
Confidence 432234433 4433332211 34677889988 889999888887765
No 13
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=97.26 E-value=0.0062 Score=53.24 Aligned_cols=39 Identities=18% Similarity=0.301 Sum_probs=31.9
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (298)
+||++++.. ..|.-...++|++.|++.|++|.+++..++
T Consensus 7 mkIl~~~~~--~gG~~~~~~~la~~L~~~G~~V~v~~~~~~ 45 (364)
T 1f0k_A 7 KRLMVMAGG--TGGHVFPGLAVAHHLMAQGWQVRWLGTADR 45 (364)
T ss_dssp CEEEEECCS--SHHHHHHHHHHHHHHHTTTCEEEEEECTTS
T ss_pred cEEEEEeCC--CccchhHHHHHHHHHHHcCCEEEEEecCCc
Confidence 689999843 337777788999999999999999996543
No 14
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=95.91 E-value=0.42 Score=41.90 Aligned_cols=187 Identities=11% Similarity=0.051 Sum_probs=85.2
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCC-eEEEEe-ccCCCCchhhhhhhHHHHHHcCCce-ee--hh---------
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGT-KVNWIT-IQKPSEEDEVIYSLEHKMWDRGVQV-IS--AK--------- 140 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~-~V~vL~-~~~G~~~g~v~~~L~~kll~rgI~v-~~--~k--------- 140 (298)
+||++++.+.+- -..+..|++.|++.|. ++.++. +..+ + . ..+.+...|+.. .+ -.
T Consensus 1 mkIl~v~~~~~~---~~~~~~l~~~L~~~g~~~~~v~~~~~~~---~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (384)
T 1vgv_A 1 MKVLTVFGTRPE---AIKMAPLVHALAKDPFFEAKVCVTAQHR---E-M---LDQVLKLFSIVPDYDLNIMQPGQGLTEI 70 (384)
T ss_dssp CEEEEEECSHHH---HHHHHHHHHHHHHSTTCEEEEEECCSSG---G-G---GHHHHHHHTCCCSEECCCCSTTSCHHHH
T ss_pred CeEEEEecccHH---HHHHHHHHHHHHhCCCCceEEEEcCCCH---H-H---HHHHHHHcCCCCCcceecCCCCccHHHH
Confidence 468888765322 2446789999999984 776655 3322 1 1 112222335433 11 00
Q ss_pred ---chhHHH---hhhccCEEEEechhchHHHHHHhhccCCCCCCceEEEeeeccc--ccccc--cccccc--cccccccc
Q 022363 141 ---GQETIN---TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRG--HYFKL--DYVKHL--PLVAGAMI 208 (298)
Q Consensus 141 ---~~~~i~---~A~~aDLVIaNT~v~g~wl~~l~~~~~p~~~~pVIWWIHE~r~--~Yf~l--~~vkhL--p~v~~~~~ 208 (298)
....+. ...++|+|++.+-....|...+... ... .|++++.|.... .|..+ ...+.+ .....+..
T Consensus 71 ~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~--~~~-ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 147 (384)
T 1vgv_A 71 TCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAF--YQR-IPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFS 147 (384)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHH--TTT-CCEEEESCCCCCSCTTSSTTHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHH--HHC-CCEEEEecccccccccCCCchHhhHHHHHhhccEEEc
Confidence 011111 2458999999753111122111101 111 289998887641 11000 000111 01222344
Q ss_pred ccHHHHHHHHHhcc-cccccccCCceEEEecCcHHHHHHHHHHHHHHHhhHHHHHHhC-CCC-CCEEEEEecccC
Q 022363 209 DSHVTAEYWKNRTR-ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLG-VRN-EDLLFAIINSMN 280 (298)
Q Consensus 209 ~S~AtA~yw~~r~~-~~~~Ikl~~~~vv~L~~s~~L~~~a~~~va~~~lre~VR~~lG-l~~-ddvlv~~~~sv~ 280 (298)
.|+..++++.+ .+ ++.+|.. ++-+..|...+.......+...++.+|+++| +++ +..++.......
T Consensus 148 ~s~~~~~~l~~-~g~~~~~i~v-----i~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~ 216 (384)
T 1vgv_A 148 PTETSRQNLLR-ENVADSRIFI-----TGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRE 216 (384)
T ss_dssp SSHHHHHHHHH-TTCCGGGEEE-----CCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBS
T ss_pred CcHHHHHHHHH-cCCChhhEEE-----eCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCcc
Confidence 49999998865 33 3233322 2222123322210000000012346889999 955 456666666544
No 15
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=95.18 E-value=0.039 Score=51.79 Aligned_cols=80 Identities=14% Similarity=0.080 Sum_probs=53.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHH--HHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh--chhHHH--
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFL--LRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK--GQETIN-- 146 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~--Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k--~~~~i~-- 146 (298)
+..||+++++++...|.--+++++++. |...|++|++++...+ ..+. +.+++...+ ....-. ....+.
T Consensus 204 ~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~-~~~~----~~~~~~~~~-~~~~~~~~~~~~l~~~ 277 (568)
T 2vsy_A 204 GPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATSGD-DGST----LRTRLAQAS-TLHDVTALGHLATAKH 277 (568)
T ss_dssp SCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCC-CSCH----HHHHHHHTS-EEEECTTCCHHHHHHH
T ss_pred CCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECCCC-CccH----HHHHHHhcC-eEEECCCCCHHHHHHH
Confidence 346899999999888888999999999 8888999999985422 1222 345555555 332211 112221
Q ss_pred -hhhccCEEEEec
Q 022363 147 -TALKADLIVLNT 158 (298)
Q Consensus 147 -~A~~aDLVIaNT 158 (298)
...++|+|+..+
T Consensus 278 i~~~~~Div~~~~ 290 (568)
T 2vsy_A 278 IRHHGIDLLFDLR 290 (568)
T ss_dssp HHHTTCSEEEECS
T ss_pred HHhCCCCEEEECC
Confidence 356899999754
No 16
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=94.10 E-value=0.37 Score=41.99 Aligned_cols=38 Identities=8% Similarity=-0.087 Sum_probs=25.8
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhC-C-CeEEEEecc
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGV-G-TKVNWITIQ 113 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~-G-~~V~vL~~~ 113 (298)
+.+||++++.+.+..| ....+++.|++. | +++++++..
T Consensus 7 ~~mkIl~v~~~~~~~~---~~~~l~~~L~~~~~~~~v~~~~~~ 46 (375)
T 3beo_A 7 ERLKVMTIFGTRPEAI---KMAPLVLELQKHPEKIESIVTVTA 46 (375)
T ss_dssp SCEEEEEEECSHHHHH---HHHHHHHHHTTCTTTEEEEEEECC
T ss_pred cCceEEEEecCcHHHH---HHHHHHHHHHhCCCCCCeEEEEcC
Confidence 3468999986644333 456788888886 4 777776643
No 17
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=93.08 E-value=0.69 Score=42.07 Aligned_cols=40 Identities=25% Similarity=0.426 Sum_probs=30.1
Q ss_pred ccccEEEEEeccCCCCCchHH-HHHHHHHHHhCCCeEEEEeccCC
Q 022363 72 MKSKLVLLVSHELSLSGGPLL-LMELAFLLRGVGTKVNWITIQKP 115 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLl-LleLA~~Lkq~G~~V~vL~~~~G 115 (298)
|+ |+||+. .+.||+=+. .+-+|+.|++.|++|.+++..+|
T Consensus 1 M~-~~i~i~---~GGTgGHi~palala~~L~~~g~~V~~vg~~~g 41 (365)
T 3s2u_A 1 MK-GNVLIM---AGGTGGHVFPALACAREFQARGYAVHWLGTPRG 41 (365)
T ss_dssp ---CEEEEE---CCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSS
T ss_pred CC-CcEEEE---cCCCHHHHHHHHHHHHHHHhCCCEEEEEECCch
Confidence 44 567776 467877654 67899999999999999986664
No 18
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=92.84 E-value=0.66 Score=41.19 Aligned_cols=52 Identities=23% Similarity=0.284 Sum_probs=37.0
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS 138 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~ 138 (298)
.||++++.. ..|.-.-++.||+.|++.|++|.+++... ..+.+.+.|+++..
T Consensus 21 MrIl~~~~~--~~Gh~~~~~~la~~L~~~GheV~v~~~~~----------~~~~~~~~g~~~~~ 72 (412)
T 3otg_A 21 MRVLFASLG--THGHTYPLLPLATAARAAGHEVTFATGEG----------FAGTLRKLGFEPVA 72 (412)
T ss_dssp CEEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEECGG----------GHHHHHHTTCEEEE
T ss_pred eEEEEEcCC--CcccHHHHHHHHHHHHHCCCEEEEEccHH----------HHHHHHhcCCceee
Confidence 479999843 33554557899999999999999998431 24555666776653
No 19
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=92.52 E-value=2.7 Score=40.90 Aligned_cols=38 Identities=26% Similarity=0.304 Sum_probs=31.0
Q ss_pred ccEEEEEeccCC---CCCc-hHHHHHHHHHHHhCCCeEEEEe
Q 022363 74 SKLVLLVSHELS---LSGG-PLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 74 ~KkILLISHELS---~TGA-PLlLleLA~~Lkq~G~~V~vL~ 111 (298)
-.|||+||-|.. -||+ ==+.-.|.+.|.+.|++|.+++
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~ 50 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVIS 50 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence 357999999964 3555 2368899999999999999997
No 20
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=92.32 E-value=1 Score=39.55 Aligned_cols=51 Identities=16% Similarity=0.270 Sum_probs=38.5
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI 137 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~ 137 (298)
++||+++.- ..|-=.-++.||+.|++.|++|.+++.. ...+.+...|+++.
T Consensus 5 ~~il~~~~~--~~Ghv~~~~~La~~L~~~GheV~v~~~~----------~~~~~~~~~G~~~~ 55 (402)
T 3ia7_A 5 RHILFANVQ--GHGHVYPSLGLVSELARRGHRITYVTTP----------LFADEVKAAGAEVV 55 (402)
T ss_dssp CEEEEECCS--SHHHHHHHHHHHHHHHHTTCEEEEEECH----------HHHHHHHHTTCEEE
T ss_pred CEEEEEeCC--CCcccccHHHHHHHHHhCCCEEEEEcCH----------HHHHHHHHcCCEEE
Confidence 589999864 3466677889999999999999999932 23455666677665
No 21
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.20 E-value=0.32 Score=40.63 Aligned_cols=89 Identities=15% Similarity=0.193 Sum_probs=47.0
Q ss_pred CccccccCCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCC-ce
Q 022363 58 SVPRIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGV-QV 136 (298)
Q Consensus 58 ~~~~~~~~~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI-~v 136 (298)
+++..++++.+..-++||+||++. -||. +=.++++.|.+.|++|.++..+.. . .+++.+.++ .+
T Consensus 5 ~~~~~~~~~~~~~~l~~~~ilVtG----atG~--iG~~l~~~L~~~G~~V~~~~R~~~----~-----~~~~~~~~~~~~ 69 (236)
T 3e8x_A 5 HHHHHHSSGRENLYFQGMRVLVVG----ANGK--VARYLLSELKNKGHEPVAMVRNEE----Q-----GPELRERGASDI 69 (236)
T ss_dssp ----------------CCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEESSGG----G-----HHHHHHTTCSEE
T ss_pred cccccccccccccCcCCCeEEEEC----CCCh--HHHHHHHHHHhCCCeEEEEECChH----H-----HHHHHhCCCceE
Confidence 444445555666678899988763 3333 667888999999999998884421 1 244555577 65
Q ss_pred eehhchhHHH-hhhccCEEEEechhc
Q 022363 137 ISAKGQETIN-TALKADLIVLNTAVA 161 (298)
Q Consensus 137 ~~~k~~~~i~-~A~~aDLVIaNT~v~ 161 (298)
+..--.+.+. ...++|.||.|....
T Consensus 70 ~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 70 VVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp EECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred EEcccHHHHHHHHcCCCEEEECCCCC
Confidence 5321113332 456899999887754
No 22
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=92.18 E-value=0.6 Score=41.72 Aligned_cols=51 Identities=18% Similarity=0.257 Sum_probs=36.5
Q ss_pred EEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee
Q 022363 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS 138 (298)
Q Consensus 76 kILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~ 138 (298)
||+|++.- ..|--.-++.|++.|++.|++|.+++.. ...+.+.+.|++++.
T Consensus 17 rIl~~~~~--~~gh~~~~~~La~~L~~~GheV~v~~~~----------~~~~~~~~~G~~~~~ 67 (398)
T 4fzr_A 17 RILVIAGC--SEGFVMPLVPLSWALRAAGHEVLVAASE----------NMGPTVTGAGLPFAP 67 (398)
T ss_dssp EEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEEEG----------GGHHHHHHTTCCEEE
T ss_pred EEEEEcCC--CcchHHHHHHHHHHHHHCCCEEEEEcCH----------HHHHHHHhCCCeeEe
Confidence 79999853 3354455789999999999999999842 234556666666553
No 23
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=91.57 E-value=1.4 Score=38.63 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=25.5
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhC-CCeEEEEec
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITI 112 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~-G~~V~vL~~ 112 (298)
+||++++.+.+-.| ....+++.|++. |++++++..
T Consensus 6 mkIl~v~~~~~~~~---~~~~l~~~L~~~~g~~v~~~~~ 41 (376)
T 1v4v_A 6 KRVVLAFGTRPEAT---KMAPVYLALRGIPGLKPLVLLT 41 (376)
T ss_dssp EEEEEEECSHHHHH---HHHHHHHHHHTSTTEEEEEEEC
T ss_pred eEEEEEEeccHHHH---HHHHHHHHHHhCCCCceEEEEc
Confidence 57999997654333 356789999998 798877763
No 24
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=90.99 E-value=1.2 Score=39.49 Aligned_cols=53 Identities=17% Similarity=0.213 Sum_probs=38.3
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
.||+|++.. ..|--.-+..|++.|++.|++|.+++.. ...+.+...|++++.-
T Consensus 2 MrIl~~~~~--~~gh~~~~~~la~~L~~~GheV~v~~~~----------~~~~~~~~~g~~~~~~ 54 (391)
T 3tsa_A 2 MRVLVVPLP--YPTHLMAMVPLCWALQASGHEVLIAAPP----------ELQATAHGAGLTTAGI 54 (391)
T ss_dssp CEEEEECCS--CHHHHHTTHHHHHHHHHTTCEEEEEECH----------HHHHHHHHBTCEEEEC
T ss_pred cEEEEEcCC--CcchhhhHHHHHHHHHHCCCEEEEecCh----------hhHHHHHhCCCceeee
Confidence 479998864 4455555788999999999999999832 2345666677766654
No 25
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=90.95 E-value=0.7 Score=42.45 Aligned_cols=36 Identities=11% Similarity=0.069 Sum_probs=27.2
Q ss_pred ccEEEEEecc-CCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 74 SKLVLLVSHE-LSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 74 ~KkILLISHE-LS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
.+||++|++. .- .|.+-.-..+++.|.+.| +|.+++
T Consensus 14 ~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~ 50 (406)
T 2hy7_A 14 RPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFS 50 (406)
T ss_dssp CSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEE
T ss_pred CceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEE
Confidence 4679999998 44 444445566788888889 999995
No 26
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=90.30 E-value=1.3 Score=43.48 Aligned_cols=86 Identities=20% Similarity=0.273 Sum_probs=57.7
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-----CCceeehhchh
Q 022363 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-----GVQVISAKGQE 143 (298)
Q Consensus 69 ~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~r-----gI~v~~~k~~~ 143 (298)
..+.+||+|.+. |.|-.+..|++.|.+.|.+++.+....++ .+.-..+ +++++. +..++......
T Consensus 355 ~~~l~Gkrv~i~-------gd~~~~~~la~~L~ElGm~vv~v~~~~~~--~~~~~~~-~~ll~~~~~~~~~~v~~~~d~~ 424 (519)
T 1qgu_B 355 HTWLHGKKFGLY-------GDPDFVMGLTRFLLELGCEPTVILSHNAN--KRWQKAM-NKMLDASPYGRDSEVFINCDLW 424 (519)
T ss_dssp HHHHTTCEEEEE-------SCHHHHHHHHHHHHHTTCEEEEEEETTCC--HHHHHHH-HHHHHHSTTCTTCEEEESCCHH
T ss_pred HHHcCCCEEEEE-------CCchHHHHHHHHHHHCCCEEEEEEeCCCC--HHHHHHH-HHHHHhcCCCCCCEEEECCCHH
Confidence 367899999987 46889999999999999999877755542 2221222 333332 46677654444
Q ss_pred HHH---hhhccCEEEEechhchHHHH
Q 022363 144 TIN---TALKADLIVLNTAVAGKWLD 166 (298)
Q Consensus 144 ~i~---~A~~aDLVIaNT~v~g~wl~ 166 (298)
.+. ...++||+|.|+- ++++.
T Consensus 425 ~l~~~i~~~~pDLiig~~~--~~~~a 448 (519)
T 1qgu_B 425 HFRSLMFTRQPDFMIGNSY--GKFIQ 448 (519)
T ss_dssp HHHHHHHHHCCSEEEECGG--GHHHH
T ss_pred HHHHHHhhcCCCEEEECcc--hHHHH
Confidence 333 2457999999986 35554
No 27
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=89.96 E-value=0.21 Score=52.06 Aligned_cols=27 Identities=11% Similarity=0.160 Sum_probs=22.5
Q ss_pred hHHHHHHhCC--CCCCEEEEEecccChhh
Q 022363 257 REHVRESLGV--RNEDLLFAIINSMNFLL 283 (298)
Q Consensus 257 re~VR~~lGl--~~ddvlv~~~~sv~~~~ 283 (298)
.+..|+.+|+ +++..+|+.+..+.|.|
T Consensus 557 p~~~r~~lg~l~~~~~~vIl~vGRl~~~K 585 (816)
T 3s28_A 557 DVENKEHLCVLKDKKKPILFTMARLDRVK 585 (816)
T ss_dssp SCCBTTEESCBSCTTSCEEEEECCCCTTT
T ss_pred hhhHHHHhcccCCCCCeEEEEEccCcccC
Confidence 3467889999 88899999999998865
No 28
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=89.44 E-value=1.7 Score=38.88 Aligned_cols=36 Identities=31% Similarity=0.283 Sum_probs=28.8
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
.||+|++.. ..|--.-++.||+.|++.|++|.+++.
T Consensus 21 MrIl~~~~~--~~Ghv~~~~~La~~L~~~GheV~v~~~ 56 (398)
T 3oti_A 21 MRVLFVSSP--GIGHLFPLIQLAWGFRTAGHDVLIAVA 56 (398)
T ss_dssp CEEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcCC--CcchHhHHHHHHHHHHHCCCEEEEecc
Confidence 479999863 334444578999999999999999986
No 29
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=88.61 E-value=0.79 Score=42.39 Aligned_cols=81 Identities=17% Similarity=0.240 Sum_probs=59.3
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhHHHhhh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQETINTAL 149 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~ 149 (298)
+|+|++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++|+.+........+....
T Consensus 146 ~~~vvVI-------GgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ig~~~ 218 (385)
T 3klj_A 146 KGKAFII-------GGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEMGDLI 218 (385)
T ss_dssp HSCEEEE-------CCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGCHHHH
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEcCeEE
Confidence 7889998 44456789999999999999998743322 234555567788888899999775544433345
Q ss_pred ccCEEEEechhc
Q 022363 150 KADLIVLNTAVA 161 (298)
Q Consensus 150 ~aDLVIaNT~v~ 161 (298)
.+|+||..|-..
T Consensus 219 ~~D~vv~a~G~~ 230 (385)
T 3klj_A 219 RSSCVITAVGVK 230 (385)
T ss_dssp HHSEEEECCCEE
T ss_pred ecCeEEECcCcc
Confidence 799999987654
No 30
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=88.25 E-value=2.3 Score=39.53 Aligned_cols=79 Identities=23% Similarity=0.247 Sum_probs=49.2
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc--------
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG-------- 141 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~-------- 141 (298)
.||+.+||+|. |.|=+-....+.|.+.|++|+.+..+-..... -.+..+..++.|||++.-..
T Consensus 18 ~~~~~mrIvf~-------G~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~--~~~v~~~A~~~gIpv~~~~~~~~~~~~~ 88 (329)
T 2bw0_A 18 LYFQSMKIAVI-------GQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGK--ADPLGLEAEKDGVPVFKYSRWRAKGQAL 88 (329)
T ss_dssp ---CCCEEEEE-------CCHHHHHHHHHHHHHTTCEEEEEEECCCCSSC--CCHHHHHHHHHTCCEEECSCCEETTEEC
T ss_pred ccCCCCEEEEE-------cCcHHHHHHHHHHHHCCCeEEEEEeCCCcCCC--CCHHHHHHHHcCCCEEecCccccccccc
Confidence 45666788888 56766667777888889998877753211111 12456777888999985321
Q ss_pred hhHHH--hhhccCEEEEe
Q 022363 142 QETIN--TALKADLIVLN 157 (298)
Q Consensus 142 ~~~i~--~A~~aDLVIaN 157 (298)
.+.++ ...++|+||+-
T Consensus 89 ~~~~~~l~~~~~Dliv~a 106 (329)
T 2bw0_A 89 PDVVAKYQALGAELNVLP 106 (329)
T ss_dssp HHHHHHHHTTCCSEEEES
T ss_pred HHHHHHHHhcCCCEEEEe
Confidence 22222 25689999874
No 31
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=87.81 E-value=2.3 Score=41.97 Aligned_cols=85 Identities=19% Similarity=0.265 Sum_probs=55.8
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-----CCceeehhchhH
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-----GVQVISAKGQET 144 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~r-----gI~v~~~k~~~~ 144 (298)
.+..||+|.+. |.|-....+++.|.+.|.+++.+....+. .+.-.-+. ++++. +..++.+.....
T Consensus 360 ~~l~GKrvaI~-------gd~~~~~~la~fL~elGm~vv~v~~~~~~--~~~~~~~~-~~l~~~~~~~~~~v~~~~D~~~ 429 (523)
T 3u7q_B 360 TWLHGKRFALW-------GDPDFVMGLVKFLLELGCEPVHILCHNGN--KRWKKAVD-AILAASPYGKNATVYIGKDLWH 429 (523)
T ss_dssp HHHTTCEEEEE-------CSHHHHHHHHHHHHHTTCEEEEEEETTCC--HHHHHHHH-HHHHTSGGGTTCEEEESCCHHH
T ss_pred HhcCCCEEEEE-------CCchHHHHHHHHHHHcCCEEEEEEeCCCC--HHHHHHHH-HHHhhccCCCCcEEEECCCHHH
Confidence 56889999986 67889999999999999998888755442 22211222 33332 345665433333
Q ss_pred HH---hhhccCEEEEechhchHHHH
Q 022363 145 IN---TALKADLIVLNTAVAGKWLD 166 (298)
Q Consensus 145 i~---~A~~aDLVIaNT~v~g~wl~ 166 (298)
+. ...++||||.|+= ++++.
T Consensus 430 l~~~i~~~~pDLlig~s~--~k~~a 452 (523)
T 3u7q_B 430 LRSLVFTDKPDFMIGNSY--GKFIQ 452 (523)
T ss_dssp HHHHHHHTCCSEEEECTT--HHHHH
T ss_pred HHHHHHhcCCCEEEECcc--HHHHH
Confidence 33 3568999999985 34444
No 32
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=86.86 E-value=1.6 Score=41.58 Aligned_cols=105 Identities=17% Similarity=0.157 Sum_probs=62.9
Q ss_pred ccccccccEEEEEeccCCCCCchHHHHHHHHHH-HhCCCeEEEEeccCCCCchhhhhhhHHHHHH--cCCceeehhchhH
Q 022363 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLL-RGVGTKVNWITIQKPSEEDEVIYSLEHKMWD--RGVQVISAKGQET 144 (298)
Q Consensus 68 ~~~f~~~KkILLISHELS~TGAPLlLleLA~~L-kq~G~~V~vL~~~~G~~~g~v~~~L~~kll~--rgI~v~~~k~~~~ 144 (298)
-..+.+||++.+. |.|-....+++.| ++.|.+|+.+....... + ..++.+.. .+..+..+.....
T Consensus 301 ~~~~l~Gkrv~i~-------g~~~~~~~l~~~L~~elG~~vv~~~~~~~~~--~---~~~~~l~~l~~~~~v~~~~d~~e 368 (437)
T 3aek_A 301 HLETLTGKSLFMF-------PDSQLEIPLARFLARECGMKTTEIATPFLHK--A---IMAPDLALLPSNTALTEGQDLEA 368 (437)
T ss_dssp THHHHTTCEEEEC-------SSSSCHHHHHHHHHHTTCCEEEEEEESCCCH--H---HHHHHHTTSBTTCEEEEECCHHH
T ss_pred HHHHhCCCEEEEE-------cCchHHHHHHHHHHHHcCCEEEEEEecCCCH--H---HHHHHHHhcCCCCEEEeCCCHHH
Confidence 3457889999986 3455788999999 99999999988644321 1 11222322 2566664432322
Q ss_pred H-H--hhhccCEEEEechhchHHHHHHhhccCCCCCCceEEEeeeccccccc
Q 022363 145 I-N--TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK 193 (298)
Q Consensus 145 i-~--~A~~aDLVIaNT~v~g~wl~~l~~~~~p~~~~pVIWWIHE~r~~Yf~ 193 (298)
+ + ...++||+|.|+.....+ .+..+ |+.|-++.-++-|..
T Consensus 369 ~~~~i~~~~pDliig~~~~~~p~----~~~G~-----P~~d~~~~~~~p~~G 411 (437)
T 3aek_A 369 QLDRHEAINPDLTVCGLGLANPL----EAKGH-----ATKWAIELVFTPVHF 411 (437)
T ss_dssp HHHHHHHHCCSEEEECHHHHHHH----HTTTC-----CEEEGGGGTSSCCSS
T ss_pred HHHHHhccCCCEEEeCCccccHH----HHCCC-----CEEeecCCCcCCcch
Confidence 2 2 356899999998753332 22344 777655443333443
No 33
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=86.84 E-value=2.6 Score=39.87 Aligned_cols=88 Identities=16% Similarity=0.178 Sum_probs=57.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhc-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALK- 150 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~- 150 (298)
++||+|++|.- +.+| |.+|++|++.|++|.+.=.+.. ...+..+++.+.||++........ ...+
T Consensus 7 ~~~k~v~viG~--G~sG-----~s~A~~l~~~G~~V~~~D~~~~-----~~~~~~~~L~~~gi~~~~g~~~~~--~~~~~ 72 (451)
T 3lk7_A 7 FENKKVLVLGL--ARSG-----EAAARLLAKLGAIVTVNDGKPF-----DENPTAQSLLEEGIKVVCGSHPLE--LLDED 72 (451)
T ss_dssp TTTCEEEEECC--TTTH-----HHHHHHHHHTTCEEEEEESSCG-----GGCHHHHHHHHTTCEEEESCCCGG--GGGSC
T ss_pred cCCCEEEEEee--CHHH-----HHHHHHHHhCCCEEEEEeCCcc-----cCChHHHHHHhCCCEEEECCChHH--hhcCC
Confidence 47899999974 4444 3569999999999987643211 012446778888999885533221 2345
Q ss_pred cCEEEEechhc--hHHHHHHhhccC
Q 022363 151 ADLIVLNTAVA--GKWLDAVLKEDV 173 (298)
Q Consensus 151 aDLVIaNT~v~--g~wl~~l~~~~~ 173 (298)
+|+||..+.+. .+.+.+..+...
T Consensus 73 ~d~vv~spgi~~~~p~~~~a~~~gi 97 (451)
T 3lk7_A 73 FCYMIKNPGIPYNNPMVKKALEKQI 97 (451)
T ss_dssp EEEEEECTTSCTTSHHHHHHHHTTC
T ss_pred CCEEEECCcCCCCChhHHHHHHCCC
Confidence 99999999884 344444443333
No 34
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=86.69 E-value=1.6 Score=38.77 Aligned_cols=72 Identities=21% Similarity=0.213 Sum_probs=48.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCceeehhchhHHHhhhc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVISAKGQETINTALK 150 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~r-gI~v~~~k~~~~i~~A~~ 150 (298)
++||+||+| |+--+-...++.|.+.|++|.++..+- ..++ .++.+. ++..+...+... .+.+
T Consensus 29 L~gk~VLVV-------GgG~va~~ka~~Ll~~GA~VtVvap~~---~~~l-----~~l~~~~~i~~i~~~~~~~--dL~~ 91 (223)
T 3dfz_A 29 LKGRSVLVV-------GGGTIATRRIKGFLQEGAAITVVAPTV---SAEI-----NEWEAKGQLRVKRKKVGEE--DLLN 91 (223)
T ss_dssp CTTCCEEEE-------CCSHHHHHHHHHHGGGCCCEEEECSSC---CHHH-----HHHHHTTSCEEECSCCCGG--GSSS
T ss_pred cCCCEEEEE-------CCCHHHHHHHHHHHHCCCEEEEECCCC---CHHH-----HHHHHcCCcEEEECCCCHh--HhCC
Confidence 678999998 333467788899999999999998432 2222 333333 566665433322 3578
Q ss_pred cCEEEEechh
Q 022363 151 ADLIVLNTAV 160 (298)
Q Consensus 151 aDLVIaNT~v 160 (298)
+|+||+.|-.
T Consensus 92 adLVIaAT~d 101 (223)
T 3dfz_A 92 VFFIVVATND 101 (223)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999854
No 35
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=86.65 E-value=2.4 Score=37.46 Aligned_cols=114 Identities=15% Similarity=0.071 Sum_probs=65.8
Q ss_pred ccccEEEEEeccCCCCCchHH-HHHHHHHHHhCCCeEEEEeccCCCCch-hhhhh--hHHHHHHc-CCceeehhch-hHH
Q 022363 72 MKSKLVLLVSHELSLSGGPLL-LMELAFLLRGVGTKVNWITIQKPSEED-EVIYS--LEHKMWDR-GVQVISAKGQ-ETI 145 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLl-LleLA~~Lkq~G~~V~vL~~~~G~~~g-~v~~~--L~~kll~r-gI~v~~~k~~-~~i 145 (298)
+++|+|++- .+.++|.+- ..++++.|++.|++|.++..+.+...- .++.+ ....+... |-+++.+... +-+
T Consensus 3 l~~k~Illg---iTGsiaayk~~~~ll~~L~~~g~eV~vv~T~~A~~vl~~f~~~~~~~~~l~~ltg~~v~~~~~~~~hi 79 (207)
T 3mcu_A 3 LKGKRIGFG---FTGSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTNTRFGEGAEWIKKIEEITGFKAINSIVGAEPL 79 (207)
T ss_dssp CTTCEEEEE---ECSCGGGGTTSHHHHHHHHHTTCEEEEEECC------------CHHHHHHHHHSSSCCBCSHHHHGGG
T ss_pred CCCCEEEEE---EEChHHHHHHHHHHHHHHHhCCCEEEEEEehHHHHHHHHhcCchhHHHHHHHHhCCceEeecCccccc
Confidence 567888764 234556554 679999999999999999977653100 11111 00222222 5666655321 224
Q ss_pred HhhhccCEEEE-----echhc----------hHHHHHHhhccCCCCCCceEEEeeeccccccc
Q 022363 146 NTALKADLIVL-----NTAVA----------GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK 193 (298)
Q Consensus 146 ~~A~~aDLVIa-----NT~v~----------g~wl~~l~~~~~p~~~~pVIWWIHE~r~~Yf~ 193 (298)
.....+|++++ ||+.. ....+..++++. |++--.=|+...|-.
T Consensus 80 ~ls~~aD~mvIaPaTanTlAKiA~GiaDnLlt~aa~~~L~~~~-----plvlaPamn~~m~~h 137 (207)
T 3mcu_A 80 GPKIPLDCMVIAPLTGNSMSKFANAMTDSPVLMAAKATLRNGK-----PVVLAVSTNDALGLN 137 (207)
T ss_dssp TTTSCCSEEEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTC-----CEEEEEEETTTTTTT
T ss_pred ccchhcCEEEEecCCHHHHHHHHccccCcHHHHHHHHHHhcCC-----CEEEEECCChhHHHH
Confidence 44678999885 55432 233445566766 888888887777764
No 36
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=86.42 E-value=2.9 Score=37.27 Aligned_cols=52 Identities=19% Similarity=0.264 Sum_probs=37.6
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS 138 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~ 138 (298)
++|+|++.- ..|-=.-++.||+.|++.|++|.+++.. ...+.+.+.|+++..
T Consensus 21 ~rIl~~~~~--~~GHv~p~l~La~~L~~~Gh~V~v~~~~----------~~~~~~~~~G~~~~~ 72 (415)
T 3rsc_A 21 AHLLIVNVA--SHGLILPTLTVVTELVRRGHRVSYVTAG----------GFAEPVRAAGATVVP 72 (415)
T ss_dssp CEEEEECCS--CHHHHGGGHHHHHHHHHTTCEEEEEECG----------GGHHHHHHTTCEEEE
T ss_pred CEEEEEeCC--CccccccHHHHHHHHHHCCCEEEEEeCH----------HHHHHHHhcCCEEEe
Confidence 589999863 3455556789999999999999999932 234556666776653
No 37
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=86.26 E-value=2.6 Score=36.89 Aligned_cols=113 Identities=15% Similarity=0.019 Sum_probs=70.5
Q ss_pred ccccEEEEEeccCCCCCchH-HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhh------HHHHHHc-CCceeehhc-h
Q 022363 72 MKSKLVLLVSHELSLSGGPL-LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSL------EHKMWDR-GVQVISAKG-Q 142 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPL-lLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L------~~kll~r-gI~v~~~k~-~ 142 (298)
+++|+|++- .+.++|-+ -..++++.|++.|++|+++..+.+. +++.+. .+.+... |-++..+.. .
T Consensus 5 l~~k~I~lg---iTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~---~~i~~~~~~~~~~~~l~~l~g~~v~~~~~~~ 78 (201)
T 3lqk_A 5 FAGKHVGFG---LTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQ---TTDTKFGESSEWINKIKQITEEPIVDSMVKA 78 (201)
T ss_dssp CTTCEEEEE---CCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSC---CTTCCTTCSCHHHHHHHHHCCSCCBCSHHHH
T ss_pred cCCCEEEEE---EEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHH---HHHHHhhchhHHHHHHHHHhCCCeEeecCcc
Confidence 578888764 34455666 6789999999999999999977654 111111 2223222 455554421 1
Q ss_pred hHHHhhhccCEEEE-----echhc----------hHHHHHHhhccCCCCCCceEEEeeeccccccccc
Q 022363 143 ETINTALKADLIVL-----NTAVA----------GKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFKLD 195 (298)
Q Consensus 143 ~~i~~A~~aDLVIa-----NT~v~----------g~wl~~l~~~~~p~~~~pVIWWIHE~r~~Yf~l~ 195 (298)
.-+.....+|++++ ||+.. ....+..++++. |+|--.-|+...|-++.
T Consensus 79 ~hi~~s~~aD~mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~-----plvl~Pamn~~m~~h~~ 141 (201)
T 3lqk_A 79 EPFGPKTPLDCMVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGK-----PVVVGISTNDALGLNGI 141 (201)
T ss_dssp GGGTTTSCCSEEEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTC-----CEEEEEEETTTTTTTHH
T ss_pred cccccccccCEEEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCC-----CEEEEECCChhHHHhHH
Confidence 22334568999885 55532 233444456666 88888888888887644
No 38
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=85.52 E-value=1.2 Score=42.39 Aligned_cols=109 Identities=19% Similarity=0.216 Sum_probs=61.1
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC--CchhhhhhhHHHHHHc---CCceeehhchh
Q 022363 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS--EEDEVIYSLEHKMWDR---GVQVISAKGQE 143 (298)
Q Consensus 69 ~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~--~~g~v~~~L~~kll~r---gI~v~~~k~~~ 143 (298)
..+.+||+|.+. |.|.....+++.|++.|.+|+.+.....+ ++..+..-+++...+. +..++.+....
T Consensus 312 ~~~l~GKrv~i~-------g~~~~~~~la~~L~elGm~vv~~gt~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~d~~ 384 (460)
T 2xdq_A 312 LELVRGKSVFFM-------GDNLLEISLARFLIRCGMRVLEIGIPYMDKRYQAAELALLSQTCAEMGHPLPTIVEKPDNY 384 (460)
T ss_dssp HHHHTTCEEEEC-------CCSSCHHHHHHHHHHTTCEEEEEEESCCCHHHHHHHHHHHHHHHHHTTCCCCEEEESCCHH
T ss_pred HHHhcCCEEEEE-------CCchHHHHHHHHHHHCCCEEEEeCCCCCChhHHHHHHHHHHHHHHhhCCCCcEEEECCCHH
Confidence 357899999985 34567788999999999999986643111 1111111122211222 34566543333
Q ss_pred HHH---hhhccCEEEEechhchHHHHHHhhccCCCCCCceEEEeeeccccccc
Q 022363 144 TIN---TALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYFK 193 (298)
Q Consensus 144 ~i~---~A~~aDLVIaNT~v~g~wl~~l~~~~~p~~~~pVIWWIHE~r~~Yf~ 193 (298)
.+. ...++||+|.|+--... +.+..+ |+.|-+++.+.-|..
T Consensus 385 el~~~i~~~~pDL~ig~~~~~~~----~~r~G~-----P~~d~~~~~~~p~~G 428 (460)
T 2xdq_A 385 NQLQRIKALQPDLVITGMAHANP----LEARGI-----STKWSVEFTFAQIHG 428 (460)
T ss_dssp HHHHHHHHHCCSEEEECHHHHHH----HHTBTC-----CEEETTHHHHSCCBS
T ss_pred HHHHHHhccCCCEEEeCcccCce----eeeccC-----cEEEecCceecCccc
Confidence 332 34699999988443322 222344 777655554445554
No 39
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=85.50 E-value=4.3 Score=34.43 Aligned_cols=90 Identities=4% Similarity=0.077 Sum_probs=50.8
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhccC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~aD 152 (298)
++|+|.+|.++.+..=-.-++-.+-..+++.|+++.+.....++.+.+. ...+.+ ...++|
T Consensus 3 ~~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~--~~i~~l-----------------~~~~vd 63 (305)
T 3g1w_A 3 LNETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRGAAQYDIQEQI--TVLEQA-----------------IAKNPA 63 (305)
T ss_dssp --CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEECSSSCHHHHH--HHHHHH-----------------HHHCCS
T ss_pred CCceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeCCCcCCHHHHH--HHHHHH-----------------HHhCCC
Confidence 5789999999876654444555666788888999988653322210000 111111 245788
Q ss_pred EEEEechhc---hHHHHHHhhccCCCCCCceEEEeee
Q 022363 153 LIVLNTAVA---GKWLDAVLKEDVPRVLPNVLWWIHE 186 (298)
Q Consensus 153 LVIaNT~v~---g~wl~~l~~~~~p~~~~pVIWWIHE 186 (298)
.||+...-. ...++++.+.++ |+|.+=.+
T Consensus 64 giIi~~~~~~~~~~~~~~~~~~~i-----PvV~~~~~ 95 (305)
T 3g1w_A 64 GIAISAIDPVELTDTINKAVDAGI-----PIVLFDSG 95 (305)
T ss_dssp EEEECCSSTTTTHHHHHHHHHTTC-----CEEEESSC
T ss_pred EEEEcCCCHHHHHHHHHHHHHCCC-----cEEEECCC
Confidence 877765432 356666655555 66665443
No 40
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=85.05 E-value=4 Score=39.08 Aligned_cols=86 Identities=17% Similarity=0.313 Sum_probs=55.7
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcC---CceeehhchhHHH
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRG---VQVISAKGQETIN 146 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rg---I~v~~~k~~~~i~ 146 (298)
.+.+||++.+.. .|-....+++.|++.|.+++.+....++ .+.-.-+++.+.+.+ ..++.......+.
T Consensus 308 ~~l~gkrv~i~~-------~~~~~~~l~~~L~elG~~vv~v~~~~~~--~~~~~~~~~ll~~~~~~~~~v~~~~d~~~l~ 378 (458)
T 1mio_B 308 QYLQGKKVALLG-------DPDEIIALSKFIIELGAIPKYVVTGTPG--MKFQKEIDAMLAEAGIEGSKVKVEGDFFDVH 378 (458)
T ss_dssp HHHTTCEEEEEE-------CHHHHHHHHHHHHTTTCEEEEEEESSCC--HHHHHHHHHHHHTTTCCSCEEEESCBHHHHH
T ss_pred HHcCCCEEEEEc-------CchHHHHHHHHHHHCCCEEEEEEeCCCC--HHHHHHHHHHHHhcCCCCCEEEECCCHHHHH
Confidence 467899998764 5778999999999999999887755542 222112222233323 3566554444443
Q ss_pred ---hhhccCEEEEechhchHHHH
Q 022363 147 ---TALKADLIVLNTAVAGKWLD 166 (298)
Q Consensus 147 ---~A~~aDLVIaNT~v~g~wl~ 166 (298)
...++|++|.|+- ++++.
T Consensus 379 ~~i~~~~pDl~ig~~~--~~~~a 399 (458)
T 1mio_B 379 QWIKNEGVDLLISNTY--GKFIA 399 (458)
T ss_dssp HHHHHSCCSEEEESGG--GHHHH
T ss_pred HHHHhcCCCEEEeCcc--hHHHH
Confidence 2458999999986 45554
No 41
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=84.96 E-value=1.4 Score=34.49 Aligned_cols=73 Identities=21% Similarity=0.214 Sum_probs=32.2
Q ss_pred eccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhh-hhHHHHHHcCCc-e-eehhchhHHH-hhhccCEEEE
Q 022363 81 SHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIY-SLEHKMWDRGVQ-V-ISAKGQETIN-TALKADLIVL 156 (298)
Q Consensus 81 SHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~-~L~~kll~rgI~-v-~~~k~~~~i~-~A~~aDLVIa 156 (298)
||-+||||++.+ +--+ -..+. ++|..|-.+..+.. -+++.+.++|++ + +.......+. ...++|+||.
T Consensus 2 ~~~~~~~~~~~~--~~~~-----~~kIl-vvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~~~~~~~~~~~~~DlIi~ 73 (110)
T 3czc_A 2 SHMASMTGGQQM--GRGS-----MVKVL-TACGNGMGSSMVIKMKVENALRQLGVSDIESASCSVGEAKGLASNYDIVVA 73 (110)
T ss_dssp -----------------------CEEEE-EECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECHHHHHHHGGGCSEEEE
T ss_pred cchhhccccccc--cccC-----CcEEE-EECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEeeHHHHhhccCCCcEEEE
Confidence 799999988762 1111 12344 44555543444444 555667677887 4 4443444443 3568999998
Q ss_pred echhc
Q 022363 157 NTAVA 161 (298)
Q Consensus 157 NT~v~ 161 (298)
-.-+.
T Consensus 74 t~~l~ 78 (110)
T 3czc_A 74 SNHLI 78 (110)
T ss_dssp ETTTG
T ss_pred CCchH
Confidence 87653
No 42
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=84.27 E-value=5.1 Score=38.91 Aligned_cols=89 Identities=16% Similarity=0.236 Sum_probs=56.7
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhh
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTAL 149 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~ 149 (298)
-|.++|+|.||+ ..|. -|--+|++|++.|++|...=.+.. .+..+++.+.||++..-..... ...
T Consensus 15 ~~~~~~~i~~iG----iGg~--Gms~lA~~l~~~G~~V~~sD~~~~-------~~~~~~L~~~gi~~~~G~~~~~--~~~ 79 (524)
T 3hn7_A 15 LYFQGMHIHILG----ICGT--FMGSLALLARALGHTVTGSDANIY-------PPMSTQLEQAGVTIEEGYLIAH--LQP 79 (524)
T ss_dssp ----CCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEESCCC-------TTHHHHHHHTTCEEEESCCGGG--GCS
T ss_pred eeecCCEEEEEE----ecHh--hHHHHHHHHHhCCCEEEEECCCCC-------cHHHHHHHHCCCEEECCCCHHH--cCC
Confidence 467889999885 2332 344589999999999876543321 1346778888999986432222 235
Q ss_pred ccCEEEEechhc--hHHHHHHhhccC
Q 022363 150 KADLIVLNTAVA--GKWLDAVLKEDV 173 (298)
Q Consensus 150 ~aDLVIaNT~v~--g~wl~~l~~~~~ 173 (298)
++|+||...++. .+.+.+..+..+
T Consensus 80 ~~d~vV~Spgi~~~~p~l~~a~~~gi 105 (524)
T 3hn7_A 80 APDLVVVGNAMKRGMDVIEYMLDTGL 105 (524)
T ss_dssp CCSEEEECTTCCTTSHHHHHHHHHTC
T ss_pred CCCEEEECCCcCCCCHHHHHHHHCCC
Confidence 799999999885 455665554444
No 43
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=83.90 E-value=3.1 Score=40.92 Aligned_cols=79 Identities=15% Similarity=0.217 Sum_probs=49.9
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHH-HhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHH--
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLL-RGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN-- 146 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~L-kq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~-- 146 (298)
.+..||+|.+. |.|.....+++.| ++.|.+|+.+........+ .+++.+.+.+..+........+.
T Consensus 276 ~~l~GKrv~i~-------gd~~~~~~la~~L~~ElGm~vv~~gt~~~~~~~----~~~~~~~~~~~~v~i~~D~~el~~~ 344 (525)
T 3aek_B 276 TYLTGKRVFIF-------GDGTHVIAAARIAAKEVGFEVVGMGCYNREMAR----PLRTAAAEYGLEALITDDYLEVEKA 344 (525)
T ss_dssp GGGTTCEEEEC-------SSHHHHHHHHHHHHHTTCCEEEEEEESCGGGHH----HHHHHHHHTTCCCEECSCHHHHHHH
T ss_pred hhcCCCEEEEE-------cCchHHHHHHHHHHHHcCCeeEEEecCchhHHH----HHHHHHHhcCCcEEEeCCHHHHHHH
Confidence 68899999863 6788899999999 8999999776654322111 22333333343333211122222
Q ss_pred -hhhccCEEEEech
Q 022363 147 -TALKADLIVLNTA 159 (298)
Q Consensus 147 -~A~~aDLVIaNT~ 159 (298)
...++||+|.|+-
T Consensus 345 i~~~~pDL~ig~~~ 358 (525)
T 3aek_B 345 IEAAAPELILGTQM 358 (525)
T ss_dssp HHHHCCSEEEECHH
T ss_pred HhhcCCCEEEecch
Confidence 3458999999985
No 44
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=82.83 E-value=3.1 Score=40.66 Aligned_cols=82 Identities=16% Similarity=0.113 Sum_probs=53.9
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc---CCceeehhchhHHH
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR---GVQVISAKGQETIN 146 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~r---gI~v~~~k~~~~i~ 146 (298)
.+.+||+|.+ .|.|...+.+++.|++.|.+|+.+....+. ..+ .+++.+. +..++++.....+.
T Consensus 344 ~~l~GKrv~i-------~g~~~~~~~la~~L~ElGm~vv~~gt~~~~-~~d-----~~~l~~~~~~~~~i~~~~d~~el~ 410 (492)
T 3u7q_A 344 PRLEGKRVML-------YIGGLRPRHVIGAYEDLGMEVVGTGYEFAH-NDD-----YDRTMKEMGDSTLLYDDVTGYEFE 410 (492)
T ss_dssp HHHTTCEEEE-------CBSSSHHHHTHHHHHTTTCEEEEEEESSCC-HHH-----HHHHHTTSCTTCEEEESCBHHHHH
T ss_pred HHhCCCEEEE-------ECCCchHHHHHHHHHHCCCEEEEEeCCCCC-HHH-----HHHHHHhCCCCcEEEcCCCHHHHH
Confidence 5789999987 345567889999999999999987755442 111 2344332 45556553333333
Q ss_pred ---hhhccCEEEEechhchHHHH
Q 022363 147 ---TALKADLIVLNTAVAGKWLD 166 (298)
Q Consensus 147 ---~A~~aDLVIaNT~v~g~wl~ 166 (298)
...++||+|.|+- ++++.
T Consensus 411 ~~i~~~~pDL~ig~~~--~~~ia 431 (492)
T 3u7q_A 411 EFVKRIKPDLIGSGIK--EKFIF 431 (492)
T ss_dssp HHHHHHCCSEEEECHH--HHHHH
T ss_pred HHHHhcCCcEEEeCcc--hhHHH
Confidence 2568999999986 35544
No 45
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=80.93 E-value=3.1 Score=34.80 Aligned_cols=59 Identities=17% Similarity=0.229 Sum_probs=40.5
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe--ccCCCCchhhhhhhHHHHHHcCCceee
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT--IQKPSEEDEVIYSLEHKMWDRGVQVIS 138 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~--~~~G~~~g~v~~~L~~kll~rgI~v~~ 138 (298)
.|.+||+||+| .|.=.||+ -+.+.++.|++.|..++-+. ..+++ .+ .+++.+.|+++..
T Consensus 110 ~~~~gk~VllV-DDvitTG~--Tl~~~~~~L~~~Ga~~v~~~~l~~~~~-~g------~~~l~~~g~~~~s 170 (180)
T 2p1z_A 110 PDVVGKKVLVV-EDTTTTGN--SPLTAVKALREAGAEVVGVATVVDRAT-GA------ADVIAAEGLEYRY 170 (180)
T ss_dssp SCCTTCEEEEE-EEECSSSH--HHHHHHHHHHHHTCEEEEEEEEEC-CC-CH------HHHHHTTTCCEEE
T ss_pred CCCCcCEEEEE-EeccCCcH--HHHHHHHHHHHcCCeEEEEEEEEEcCc-ch------HHHHHhcCCeEEE
Confidence 36899999888 77777898 56788999999998744222 33332 11 3456667888764
No 46
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=80.72 E-value=3.2 Score=37.88 Aligned_cols=81 Identities=15% Similarity=0.308 Sum_probs=57.1
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhH-----
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQET----- 144 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~g~v~~~L~~kll~rgI~v~~~k~~~~----- 144 (298)
+|++++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++|+.+........
T Consensus 152 ~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~ 224 (415)
T 3lxd_A 152 AKNAVVI-------GGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG 224 (415)
T ss_dssp CCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecC
Confidence 8899988 45557789999999999999998744322 2455666677888888999885421111
Q ss_pred -----HH----hhhccCEEEEechhc
Q 022363 145 -----IN----TALKADLIVLNTAVA 161 (298)
Q Consensus 145 -----i~----~A~~aDLVIaNT~v~ 161 (298)
+. ....+|+||..|-..
T Consensus 225 ~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 225 TKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp SBEEEEEESSSCEEECSEEEECSCCE
T ss_pred CcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 11 134689999987654
No 47
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=80.69 E-value=5.9 Score=35.79 Aligned_cols=85 Identities=15% Similarity=0.206 Sum_probs=53.9
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhh-hccC
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTA-LKAD 152 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A-~~aD 152 (298)
.|+|.||. +..+ =|--+|++|++.|++|.+.=.+.. .+..+++.+.|+++........ .. .++|
T Consensus 4 ~~~i~~iG--iGg~----Gms~~A~~L~~~G~~V~~~D~~~~-------~~~~~~L~~~gi~v~~g~~~~~--l~~~~~d 68 (326)
T 3eag_A 4 MKHIHIIG--IGGT----FMGGLAAIAKEAGFEVSGCDAKMY-------PPMSTQLEALGIDVYEGFDAAQ--LDEFKAD 68 (326)
T ss_dssp CCEEEEES--CCSH----HHHHHHHHHHHTTCEEEEEESSCC-------TTHHHHHHHTTCEEEESCCGGG--GGSCCCS
T ss_pred CcEEEEEE--ECHH----HHHHHHHHHHhCCCEEEEEcCCCC-------cHHHHHHHhCCCEEECCCCHHH--cCCCCCC
Confidence 36777774 1222 233489999999999987543321 1345778888999985422221 22 4799
Q ss_pred EEEEechhc--hHHHHHHhhccC
Q 022363 153 LIVLNTAVA--GKWLDAVLKEDV 173 (298)
Q Consensus 153 LVIaNT~v~--g~wl~~l~~~~~ 173 (298)
+||....+. .+.+.+..+...
T Consensus 69 ~vV~Spgi~~~~p~~~~a~~~gi 91 (326)
T 3eag_A 69 VYVIGNVAKRGMDVVEAILNLGL 91 (326)
T ss_dssp EEEECTTCCTTCHHHHHHHHTTC
T ss_pred EEEECCCcCCCCHHHHHHHHcCC
Confidence 999999885 455665553344
No 48
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=80.54 E-value=1.7 Score=42.23 Aligned_cols=86 Identities=16% Similarity=0.231 Sum_probs=53.1
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHH--
Q 022363 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN-- 146 (298)
Q Consensus 69 ~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~-- 146 (298)
..+..||+|.+. |.|.....+++.|++.|.+|+.+....+. .+....+ .+++..+..++.+.....+.
T Consensus 327 ~~~l~GKrv~i~-------~~~~~~~~l~~~L~ElGmevv~~gt~~~~--~~d~~~~-~~~l~~~~~i~~d~d~~el~~~ 396 (483)
T 3pdi_A 327 RARLEGKRVLLY-------TGGVKSWSVVSALQDLGMKVVATGTKKST--EEDKARI-RELMGDDVKMLDEGNARVLLKT 396 (483)
T ss_dssp HHHHTTCEEEEE-------CSSSCHHHHHHHHHHHTCEEEEECBSSSC--HHHHHHH-HHHSCSSCCBCCSCSHHHHHHH
T ss_pred HHHhcCCEEEEE-------CCCchHHHHHHHHHHCCCEEEEEecCCCC--HHHHHHH-HHhcCCCCEEEeCCCHHHHHHH
Confidence 356889999874 33445678899999999999987655442 1110111 22223355566553333332
Q ss_pred -hhhccCEEEEechhchHHHH
Q 022363 147 -TALKADLIVLNTAVAGKWLD 166 (298)
Q Consensus 147 -~A~~aDLVIaNT~v~g~wl~ 166 (298)
...++||+|.|+- ++++.
T Consensus 397 i~~~~pDL~ig~~~--~~~~a 415 (483)
T 3pdi_A 397 VDEYQADILIAGGR--NMYTA 415 (483)
T ss_dssp HHHTTCSEEECCGG--GHHHH
T ss_pred HHhcCCCEEEECCc--hhHHH
Confidence 2568999999986 55554
No 49
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=80.25 E-value=3.4 Score=35.35 Aligned_cols=59 Identities=19% Similarity=0.291 Sum_probs=41.9
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE---EEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN---WITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~---vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
.|.+||+||+| .|.-.||+ -+.+.++.|++.|..++ ++..+.. +-.+++.+.|+++..-
T Consensus 107 ~~~~gk~VliV-DDvitTG~--Tl~~a~~~L~~~Ga~~v~~~~l~~~~~--------~~~~~l~~~g~~v~sl 168 (205)
T 2wns_A 107 TINPGETCLII-EDVVTSGS--SVLETVEVLQKEGLKVTDAIVLLDREQ--------GGKDKLQAHGIRLHSV 168 (205)
T ss_dssp CCCTTCBEEEE-EEEESSSH--HHHHHHHHHHHTTCBCCEEEEEEECCS--------SHHHHHHTTTCEEEEE
T ss_pred CCCCCCEEEEE-EEeccccH--HHHHHHHHHHHCCCEEEEEEEEEEcCc--------chHHHHHHcCCeEEEE
Confidence 35689999888 77778898 67789999999998743 3344421 1135677778888754
No 50
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=80.04 E-value=4.6 Score=36.05 Aligned_cols=65 Identities=18% Similarity=0.200 Sum_probs=43.5
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEE---EeccCCCCc-hhhhhhhHHHHHHcCCceeeh
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNW---ITIQKPSEE-DEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~v---L~~~~G~~~-g~v~~~L~~kll~rgI~v~~~ 139 (298)
+.+||+||+| .|.=.||. -+.+.++.|++.|.+++- +..+..... +. .+...+.+.+.|+++..-
T Consensus 133 ~~~Gk~VLIV-DDVitTG~--Tl~~a~~~L~~~Ga~vv~v~vlvdr~e~g~~~~-~~a~~~~~~~~gv~v~sL 201 (232)
T 3mjd_A 133 DMTNKKVLLI-DDVMTAGT--AFYESYNKLKIINAKIAGVVLSIDRQEKAKDSD-ISATKKISQDFNIPVLAV 201 (232)
T ss_dssp CCTTCEEEEE-CSCCSSSH--HHHHHHHHHHTTTCEEEEEEEEEECCBCCTTSS-SCHHHHHHHHHCCCEEEE
T ss_pred CCCCCEEEEE-EeeccccH--HHHHHHHHHHHCCCEEEEEEEEEECCcCCcccc-chhHHHHHHHcCCcEEEE
Confidence 5689999888 56667777 578999999999998653 333221101 11 234456667789998854
No 51
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=79.50 E-value=4.3 Score=39.49 Aligned_cols=79 Identities=13% Similarity=0.175 Sum_probs=51.2
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHH-HhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHH--
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLL-RGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN-- 146 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~L-kq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~-- 146 (298)
.+..||+|.+. |.|.....+++.| ++.|.+|+......+.+.+ .+.+.+.+.+-.+........+.
T Consensus 299 ~~l~Gkrv~i~-------gd~~~~~~l~~~L~~elGm~vv~~gt~~~~~~~----~~~~~l~~~~~~v~~~~D~~el~~~ 367 (511)
T 2xdq_B 299 QNLTGKKAVVF-------GDNTHAAAMTKILSREMGIHVVWAGTYCKYDAD----WFRAEVAGFCDEVLITDDHTVVGDA 367 (511)
T ss_dssp HTTTTCEEEEE-------ECHHHHHHHHHHHHHHHCCEEEEEEESCGGGHH----HHHHHHTTTSSEEEECCCHHHHHHH
T ss_pred HhccCCEEEEE-------cCChHHHHHHHHHHHhCCCEEEEeecCCCCchH----HHHHHHHhcCCcEEEeCCHHHHHHH
Confidence 57899999886 4677899999999 8999999876644332111 22334444443444322232332
Q ss_pred -hhhccCEEEEech
Q 022363 147 -TALKADLIVLNTA 159 (298)
Q Consensus 147 -~A~~aDLVIaNT~ 159 (298)
...++|++|.|+-
T Consensus 368 i~~~~pDl~ig~~~ 381 (511)
T 2xdq_B 368 IARVEPAAIFGTQM 381 (511)
T ss_dssp HHHHCCSEEEECHH
T ss_pred HHhcCCCEEEeccc
Confidence 3458999999986
No 52
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=78.79 E-value=2.5 Score=38.50 Aligned_cols=82 Identities=18% Similarity=0.235 Sum_probs=56.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC--CchhhhhhhHHHHHHcCCceeehhchhHHH----
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS--EEDEVIYSLEHKMWDRGVQVISAKGQETIN---- 146 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~--~~g~v~~~L~~kll~rgI~v~~~k~~~~i~---- 146 (298)
.+|++++| |+-..-+|+|..|++.|.+|.++...... .+.++...+++.+.++||++........+.
T Consensus 142 ~~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~v 214 (367)
T 1xhc_A 142 NSGEAIII-------GGGFIGLELAGNLAEAGYHVKLIHRGAMFLGLDEELSNMIKDMLEETGVKFFLNSELLEANEEGV 214 (367)
T ss_dssp HHSEEEEE-------ECSHHHHHHHHHHHHTTCEEEEECSSSCCTTCCHHHHHHHHHHHHHTTEEEECSCCEEEECSSEE
T ss_pred cCCcEEEE-------CCCHHHHHHHHHHHhCCCEEEEEeCCCeeccCCHHHHHHHHHHHHHCCCEEEcCCEEEEEEeeEE
Confidence 46889888 44457899999999999999998743221 334565677888888899988653222211
Q ss_pred -hh---hccCEEEEechhc
Q 022363 147 -TA---LKADLIVLNTAVA 161 (298)
Q Consensus 147 -~A---~~aDLVIaNT~v~ 161 (298)
.. ..+|+||..|-..
T Consensus 215 ~~~~g~i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 215 LTNSGFIEGKVKICAIGIV 233 (367)
T ss_dssp EETTEEEECSCEEEECCEE
T ss_pred EECCCEEEcCEEEECcCCC
Confidence 11 4789999866543
No 53
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=77.63 E-value=2.7 Score=33.16 Aligned_cols=76 Identities=13% Similarity=0.169 Sum_probs=46.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHHh--
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETINT-- 147 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~~-- 147 (298)
|.+++|++++ .+..| .++++.|.+.|++|.++..... +....+ .+....|+.++.- .....+..
T Consensus 1 ~~~~~vlI~G--~G~vG-----~~la~~L~~~g~~V~vid~~~~----~~~~~~-~~~~~~~~~~i~gd~~~~~~l~~a~ 68 (153)
T 1id1_A 1 HRKDHFIVCG--HSILA-----INTILQLNQRGQNVTVISNLPE----DDIKQL-EQRLGDNADVIPGDSNDSSVLKKAG 68 (153)
T ss_dssp CCCSCEEEEC--CSHHH-----HHHHHHHHHTTCCEEEEECCCH----HHHHHH-HHHHCTTCEEEESCTTSHHHHHHHT
T ss_pred CCCCcEEEEC--CCHHH-----HHHHHHHHHCCCCEEEEECCCh----HHHHHH-HHhhcCCCeEEEcCCCCHHHHHHcC
Confidence 5677888886 34444 6788999999999999874311 110011 1223447777743 22334442
Q ss_pred hhccCEEEEech
Q 022363 148 ALKADLIVLNTA 159 (298)
Q Consensus 148 A~~aDLVIaNT~ 159 (298)
..++|.||+-|-
T Consensus 69 i~~ad~vi~~~~ 80 (153)
T 1id1_A 69 IDRCRAILALSD 80 (153)
T ss_dssp TTTCSEEEECSS
T ss_pred hhhCCEEEEecC
Confidence 569999998764
No 54
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=77.31 E-value=2.9 Score=38.36 Aligned_cols=89 Identities=20% Similarity=0.191 Sum_probs=59.0
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhH----
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQET---- 144 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~g~v~~~L~~kll~rgI~v~~~k~~~~---- 144 (298)
.+|++++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++|+.+.......+
T Consensus 142 ~~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 214 (410)
T 3ef6_A 142 SATRLLIV-------GGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGE 214 (410)
T ss_dssp TTCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECS
T ss_pred cCCeEEEE-------CCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEecc
Confidence 38899988 45557789999999999999988744322 2344555677778888998875422111
Q ss_pred -----HH----hhhccCEEEEechhch--HHHHHH
Q 022363 145 -----IN----TALKADLIVLNTAVAG--KWLDAV 168 (298)
Q Consensus 145 -----i~----~A~~aDLVIaNT~v~g--~wl~~l 168 (298)
+. ....+|+||..|-... .+++.+
T Consensus 215 ~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~ 249 (410)
T 3ef6_A 215 GQLEQVMASDGRSFVADSALICVGAEPADQLARQA 249 (410)
T ss_dssp SSCCEEEETTSCEEECSEEEECSCEEECCHHHHHT
T ss_pred CcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhC
Confidence 11 1246899999876543 355443
No 55
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=77.17 E-value=3.9 Score=38.21 Aligned_cols=80 Identities=16% Similarity=0.150 Sum_probs=57.0
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchhHHH----
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQETIN---- 146 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~---- 146 (298)
.+++++| |+-..-+|+|..|++.|.+|.++..... ..+.++...+++.+.++||++......+.++
T Consensus 147 ~~~vvVi-------GgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~v 219 (437)
T 4eqs_A 147 VDKVLVV-------GAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEI 219 (437)
T ss_dssp CCEEEEE-------CCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEETTEE
T ss_pred CcEEEEE-------CCccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEEEecCCee
Confidence 5678887 4445678999999999999999874322 2456677788999999999998663322222
Q ss_pred -----hhhccCEEEEechh
Q 022363 147 -----TALKADLIVLNTAV 160 (298)
Q Consensus 147 -----~A~~aDLVIaNT~v 160 (298)
....+|+|+..+-.
T Consensus 220 ~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 220 TFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp EETTSCEEECSEEEECCCE
T ss_pred eecCCeEEeeeeEEEEece
Confidence 23478999986543
No 56
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=76.71 E-value=4.4 Score=33.93 Aligned_cols=58 Identities=24% Similarity=0.327 Sum_probs=40.3
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE---EEeccCCCCchhhhhhhHHHHHHcCCceee
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN---WITIQKPSEEDEVIYSLEHKMWDRGVQVIS 138 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~---vL~~~~G~~~g~v~~~L~~kll~rgI~v~~ 138 (298)
..+||+||+| .|.-.||+ -|.+.++.|++.|..++ ++..+ +.. +=.+++.+.|+++..
T Consensus 123 ~~~gk~VLlV-DDvitTG~--Tl~~a~~~L~~~Ga~~V~~~~l~~~-~~~------~~~~~l~~~g~~v~s 183 (190)
T 2dy0_A 123 IKPGDKVLVV-DDLLATGG--TIEATVKLIRRLGGEVADAAFIINL-FDL------GGEQRLEKQGITSYS 183 (190)
T ss_dssp CCTTCEEEEE-EEEESSCH--HHHHHHHHHHHTTCEEEEEEEEEEE-GGG------CHHHHHHTTTCEEEE
T ss_pred cCCcCEEEEE-EccccchH--HHHHHHHHHHHcCCEEEEEEEEEEc-cCc------chHHHHhhCCCcEEE
Confidence 3589999888 77888999 66899999999998854 23333 210 114567667888763
No 57
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=76.63 E-value=2.4 Score=38.10 Aligned_cols=40 Identities=15% Similarity=0.109 Sum_probs=30.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
|.-++|++++. ...|.-..++.|++.|++.|++|.+++..
T Consensus 5 m~m~kIl~~~~--~~~Gh~~p~~~la~~L~~~G~~V~~~~~~ 44 (430)
T 2iyf_A 5 TTPAHIAMFSI--AAHGHVNPSLEVIRELVARGHRVTYAIPP 44 (430)
T ss_dssp ---CEEEEECC--SCHHHHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred cccceEEEEeC--CCCccccchHHHHHHHHHCCCeEEEEeCH
Confidence 44468999875 23466667899999999999999999844
No 58
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=76.60 E-value=3.9 Score=38.02 Aligned_cols=80 Identities=10% Similarity=0.203 Sum_probs=54.9
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchhHHH----
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQETIN---- 146 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~---- 146 (298)
+|++++| |+-..-+|+|..|.+.|.+|.++..... ....++...+.+.+.++||++........+.
T Consensus 180 ~~~v~Vi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~ 252 (476)
T 3lad_A 180 PGKLGVI-------GAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNK 252 (476)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCC
Confidence 5778887 4445678999999999999998874432 2345666777888888899887552211111
Q ss_pred ------------hhhccCEEEEechh
Q 022363 147 ------------TALKADLIVLNTAV 160 (298)
Q Consensus 147 ------------~A~~aDLVIaNT~v 160 (298)
....+|.||..|-.
T Consensus 253 ~~~v~~~~~~g~~~~~~D~vi~a~G~ 278 (476)
T 3lad_A 253 QVTVKFVDAEGEKSQAFDKLIVAVGR 278 (476)
T ss_dssp CEEEEEESSSEEEEEEESEEEECSCE
T ss_pred EEEEEEEeCCCcEEEECCEEEEeeCC
Confidence 12357888887764
No 59
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=76.56 E-value=5 Score=34.26 Aligned_cols=60 Identities=15% Similarity=0.279 Sum_probs=41.6
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE--EEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN--WITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~--vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+.+||+||+| .|.-.||+ -+.+.++.|++.|..++ +.+..++. + .-.+++.+.|++++.-
T Consensus 114 ~~~gk~VliV-DDvitTG~--Tl~~a~~~L~~~Ga~~v~v~~l~~~~~--~----~~~~~l~~~~~~~~~l 175 (211)
T 2aee_A 114 VLKGQKMVII-EDLISTGG--SVLDAAAAASREGADVLGVVAIFTYEL--P----KASQNFKEAGIKLITL 175 (211)
T ss_dssp CCTTCEEEEE-EEEESSCH--HHHHHHHHHHHTTCEEEEEEEEEECCC--H----HHHHHHHHHTCCEEES
T ss_pred CCCcCEEEEE-eecccchH--HHHHHHHHHHHCCCcEEEEEEEEeccc--c----cHHHHHHhCCCCEEEE
Confidence 6899998887 67777898 67789999999999863 33333331 1 1245666667777644
No 60
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=76.55 E-value=4.3 Score=39.00 Aligned_cols=82 Identities=18% Similarity=0.384 Sum_probs=56.8
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchhHH----
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQETI---- 145 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~g~v~~~L~~kll~rgI~v~~~k~~~~i---- 145 (298)
.+|++++| |+-..-+|+|..|.+.|.+|.++..... ....++...+.+.+.++|+.+........+
T Consensus 186 ~~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~ 258 (588)
T 3ics_A 186 KPRHATVI-------GGGFIGVEMVENLRERGIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENG 258 (588)
T ss_dssp CCSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG
T ss_pred CCCeEEEE-------CCCHHHHHHHHHHHhCCCeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCC
Confidence 47888888 4445678999999999999998874322 134566667888888889998754221111
Q ss_pred ---H----hhhccCEEEEechhc
Q 022363 146 ---N----TALKADLIVLNTAVA 161 (298)
Q Consensus 146 ---~----~A~~aDLVIaNT~v~ 161 (298)
. ....+|.||..|-..
T Consensus 259 ~~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 259 AVVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp TEEEETTSCEEECSEEEECSCEE
T ss_pred CEEEECCCCEEEcCEEEEccCCC
Confidence 1 124689999887653
No 61
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=76.55 E-value=4.4 Score=36.90 Aligned_cols=88 Identities=18% Similarity=0.260 Sum_probs=59.4
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhH----
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQET---- 144 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~g~v~~~L~~kll~rgI~v~~~k~~~~---- 144 (298)
.+|++++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++|+.+.......+
T Consensus 141 ~~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 213 (404)
T 3fg2_P 141 DKKHVVVI-------GAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAE 213 (404)
T ss_dssp GCSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEE
T ss_pred cCCeEEEE-------CCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEec
Confidence 57889888 45567789999999999999988744321 2455666677888888998875421111
Q ss_pred ------HH----hhhccCEEEEechhc--hHHHHH
Q 022363 145 ------IN----TALKADLIVLNTAVA--GKWLDA 167 (298)
Q Consensus 145 ------i~----~A~~aDLVIaNT~v~--g~wl~~ 167 (298)
+. ....+|+||..|-.. ..+++.
T Consensus 214 ~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~ 248 (404)
T 3fg2_P 214 GDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAA 248 (404)
T ss_dssp TTEEEEEEETTSCEEECSEEEECCCEEECCHHHHH
T ss_pred CCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHh
Confidence 11 134689999988653 235543
No 62
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=76.28 E-value=1.3 Score=41.25 Aligned_cols=141 Identities=11% Similarity=0.104 Sum_probs=76.8
Q ss_pred cccEEEEEeccCCCC---CchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee------------
Q 022363 73 KSKLVLLVSHELSLS---GGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI------------ 137 (298)
Q Consensus 73 ~~KkILLISHELS~T---GAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~------------ 137 (298)
.++||++++...+-. |+.-...++|+.|.+.|++|.+++....+. .+. ...+. +.+..
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~~~~-~~~----~~~~~--~~~~~~~~~~~~~~~~i 117 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDATPN-PKD----LQSFK--SFKYVMPEEDKDFALQI 117 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSCCCC-HHH----HGGGT--TSEECCTTCCCCCSEEE
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecCCCC-hHH----HHhhh--ccceeeccCCcccccee
Confidence 568999999998853 777778999999999999999999653221 110 01111 11110
Q ss_pred ehhc--hhHHHhhhccCEEEEechhchHHHHHHhhc---cCCCCCCceEEEeeeccccccccccccc-----cccc--cc
Q 022363 138 SAKG--QETINTALKADLIVLNTAVAGKWLDAVLKE---DVPRVLPNVLWWIHEMRGHYFKLDYVKH-----LPLV--AG 205 (298)
Q Consensus 138 ~~k~--~~~i~~A~~aDLVIaNT~v~g~wl~~l~~~---~~p~~~~pVIWWIHE~r~~Yf~l~~vkh-----Lp~v--~~ 205 (298)
.... ........++|+|++.....+.+...+.+. .......|.++.+|+....|........ .-.. ..
T Consensus 118 ~~~~~~~~~~~~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (413)
T 2x0d_A 118 VPFNDRYNRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEPGFYQWSSQYVLAESTYKYRGPQI 197 (413)
T ss_dssp EECSCCTTCCEEECTTEEEEECSHHHHHHHHHHHHHHHHHHTCCCCCEEEEECSCGGGGSCSSHHHHHHHHTTSCCSCEE
T ss_pred eeccccccccccCCCCCEEEEehHHHHHHHHHhhhhhhhhcccccCcEEEEEeechhhcCccChHHHHHHHHhccCCceE
Confidence 0000 000001347999999876655555444110 0011122788888886543322110000 0000 01
Q ss_pred cccccHHHHHHHHHh
Q 022363 206 AMIDSHVTAEYWKNR 220 (298)
Q Consensus 206 ~~~~S~AtA~yw~~r 220 (298)
++..|+..+++.++.
T Consensus 198 vi~~S~~~~~~l~~~ 212 (413)
T 2x0d_A 198 AVFNSELLKQYFNNK 212 (413)
T ss_dssp EEEESHHHHHHHHHH
T ss_pred EEEcCHHHHHHHHHc
Confidence 334599999999865
No 63
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=76.09 E-value=11 Score=34.95 Aligned_cols=79 Identities=19% Similarity=0.226 Sum_probs=50.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC--CCC--chhhhhhhHHHHHHcCCceeehhc---hhH
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK--PSE--EDEVIYSLEHKMWDRGVQVISAKG---QET 144 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~--G~~--~g~v~~~L~~kll~rgI~v~~~k~---~~~ 144 (298)
|+..||+|. |.|=+...-.+.|.+.|++|+.+..+. +.. ......++.+..++.|||++.-.. .+.
T Consensus 5 ~~~mrivf~-------Gt~~fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~ 77 (318)
T 3q0i_A 5 SQSLRIVFA-------GTPDFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPENFKSDES 77 (318)
T ss_dssp --CCEEEEE-------CCSHHHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHTTCCEECCSCSCSHHH
T ss_pred ccCCEEEEE-------ecCHHHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEccCcCCCHHH
Confidence 455678886 677777777788888899998887642 111 111224667888889999985422 222
Q ss_pred HH--hhhccCEEEEe
Q 022363 145 IN--TALKADLIVLN 157 (298)
Q Consensus 145 i~--~A~~aDLVIaN 157 (298)
++ ...++|+||+-
T Consensus 78 ~~~l~~~~~Dliv~~ 92 (318)
T 3q0i_A 78 KQQLAALNADLMVVV 92 (318)
T ss_dssp HHHHHTTCCSEEEES
T ss_pred HHHHHhcCCCEEEEe
Confidence 22 35689999974
No 64
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=75.98 E-value=4.5 Score=38.31 Aligned_cols=60 Identities=18% Similarity=0.280 Sum_probs=44.9
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeeh
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
.+|+|++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++|+++...
T Consensus 150 ~~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~ 212 (565)
T 3ntd_A 150 NVEHATVV-------GGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLG 212 (565)
T ss_dssp TCSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEET
T ss_pred CCCEEEEE-------CCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeC
Confidence 36789988 44557789999999999999998744321 33556666778888889988754
No 65
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=75.95 E-value=6.2 Score=39.30 Aligned_cols=174 Identities=12% Similarity=0.122 Sum_probs=99.3
Q ss_pred ccccEEEEEecc-CCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhc
Q 022363 72 MKSKLVLLVSHE-LSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALK 150 (298)
Q Consensus 72 ~~~KkILLISHE-LS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~ 150 (298)
++.+.|+|.|.. -+.+|.|-.+++.+.... .+.+++|++.+.- . .....|+.++.....+.+..+..
T Consensus 350 ~~~~~ivf~s~~g~~~~~n~~~i~~~l~~~~-~~~~~~w~~~~~~---~--------~~~~~~~~~v~~~s~~~~~~l~~ 417 (729)
T 3l7i_A 350 VKPKTIVFESFGGKNYSDSPKYIYEYMQKYY-PNYRYIWSFKNPD---K--------NVVPGSAEKVKRNSAEYYQAYSE 417 (729)
T ss_dssp CEEEEEEEEBGGGTBSCHHHHHHHHHHHHHC-TTSEEEEEESSGG---G--------CCCCSSCEEEETTSHHHHHHHHH
T ss_pred CcCCEEEEEECCCCCCCCCHHHHHHHHHHhC-CCceEEEEEcCcc---c--------ccCCCCcEEEEECCHHHHHHHhc
Confidence 578899999976 557899999987665432 2689999995431 0 01234677776655666667778
Q ss_pred cCEEEEechhchHHHHHHhhccCCCC-CCceEEEeeecc--ccccccccccccccc----------------cccccccH
Q 022363 151 ADLIVLNTAVAGKWLDAVLKEDVPRV-LPNVLWWIHEMR--GHYFKLDYVKHLPLV----------------AGAMIDSH 211 (298)
Q Consensus 151 aDLVIaNT~v~g~wl~~l~~~~~p~~-~~pVIWWIHE~r--~~Yf~l~~vkhLp~v----------------~~~~~~S~ 211 (298)
++.+|.|+-.-. |+ ++- ...+|.-=|=.. ...++.+.. ++|.. --+...|+
T Consensus 418 a~~~v~n~~~~~-~~--------~k~~~~~~iq~wHG~~lK~~g~d~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~s~ 487 (729)
T 3l7i_A 418 ASHWVSNARTPL-YL--------NKKENQTYIQTWHGTPLKRLANDMKVV-RMPGTTTPKYKRNFNRETSRWDYLISPNR 487 (729)
T ss_dssp EEEEEESSCCCT-TS--------CCCTTCEEEECCSSCCSBCCGGGCSCC-CCTTCCHHHHHHHHHHHHTTCSEEEESSH
T ss_pred CcEEEECCCCcc-cc--------ccCCCcEEEECCCCCchhhcccccccc-ccccccCHHHHHHHHHhhccCCEEEeCCH
Confidence 899999886532 11 111 113343334321 000110000 00100 01345688
Q ss_pred HHHHHHHHhcc-cccccccCCceEEEecCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEEe
Q 022363 212 VTAEYWKNRTR-ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 276 (298)
Q Consensus 212 AtA~yw~~r~~-~~~~Ikl~~~~vv~L~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~~ 276 (298)
.+.+.|++-++ ++.+|-. .-.-.+|.+.. .-.+...++.+++.+|++++.-+|---
T Consensus 488 ~~~~~~~~~f~~~~~~i~~-----~G~PR~D~l~~----~~~~~~~~~~~~~~~~~~~~kk~ILya 544 (729)
T 3l7i_A 488 YSTEIFRSAFWMDEERILE-----IGYPRNDVLVN----RANDQEYLDEIRTHLNLPSDKKVIMYA 544 (729)
T ss_dssp HHHHHHHHHTCCCGGGEEE-----SCCGGGHHHHH----STTCHHHHHHHHHHTTCCSSCEEEEEC
T ss_pred HHHHHHHHHhCCCcceEEE-----cCCCchHHHhc----ccchHHHHHHHHHHhCCCCCCeEEEEe
Confidence 88888887776 3233322 34556777764 111122567789999999887766544
No 66
>2lta_A De novo designed protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=77.17 E-value=0.59 Score=37.51 Aligned_cols=49 Identities=29% Similarity=0.365 Sum_probs=36.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR 132 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~r 132 (298)
|-||.|++||-|-. -|-|||+..+..|.+|.+|+..+.+. -|++++.+.
T Consensus 1 mgskiiviissddt------tleelarkikdeglevyillkdkdek------rleekiqkl 49 (110)
T 2lta_A 1 MGSKIIVIISSDDT------TLEELARKIKDEGLEVYILLKDKDEK------RLEEKIQKL 49 (110)
Confidence 45788888887643 47799999999999999999665431 456665544
No 67
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=75.13 E-value=6.8 Score=32.61 Aligned_cols=58 Identities=17% Similarity=0.231 Sum_probs=40.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe--ccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT--IQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~--~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
++||+||+| .|.-.||+ -|.+.++.|++.|..++-++ ..+++ +-.+++.+.|+++..-
T Consensus 104 ~~gk~VllV-DDvitTG~--Tl~~~~~~L~~~Ga~~v~~~~l~~r~~-------~~~~~l~~~g~~~~sl 163 (178)
T 2yzk_A 104 PPKGRVVVV-DDVATTGT--SIAKSIEVLRSNGYTVGTALVLVDRGE-------GAGELLARMGVRLVSV 163 (178)
T ss_dssp CCSSEEEEE-EEEESSSH--HHHHHHHHHHHTTCEEEEEEEEEECCS-------SHHHHHHTTTCEEEEE
T ss_pred CCCCEEEEE-EeccCCcH--HHHHHHHHHHHcCCeEEEEEEEEEcCc-------CHHHHHHHcCCcEEEE
Confidence 499999888 77778898 56799999999999854333 23321 1145676678887743
No 68
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=75.05 E-value=8.4 Score=36.26 Aligned_cols=82 Identities=18% Similarity=0.273 Sum_probs=57.5
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC----CCchhhhhhhHHHHHHcCCceeehhchhHH---
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP----SEEDEVIYSLEHKMWDRGVQVISAKGQETI--- 145 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G----~~~g~v~~~L~~kll~rgI~v~~~k~~~~i--- 145 (298)
.+|+|++| |+-..-+|+|..|++.|.+|.++..... ..+.++...+.+.+.++||++.......++
T Consensus 193 ~~~~vvVI-------GgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 265 (490)
T 2bc0_A 193 DIKRVAVV-------GAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGN 265 (490)
T ss_dssp TCCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECS
T ss_pred CCceEEEE-------CCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcC
Confidence 57888888 6667889999999999999999984432 134556667788888889988755211111
Q ss_pred ------H---hhhccCEEEEechhc
Q 022363 146 ------N---TALKADLIVLNTAVA 161 (298)
Q Consensus 146 ------~---~A~~aDLVIaNT~v~ 161 (298)
. ....+|+||..|-..
T Consensus 266 ~~v~~v~~~g~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 266 GKVEKIITDKNEYDVDMVILAVGFR 290 (490)
T ss_dssp SSCCEEEESSCEEECSEEEECCCEE
T ss_pred CcEEEEEECCcEEECCEEEECCCCC
Confidence 1 124689999887643
No 69
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=74.89 E-value=5.8 Score=34.41 Aligned_cols=66 Identities=12% Similarity=0.164 Sum_probs=42.4
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe--ccCCCCchh----hhhhhHHHHHHcCCceeeh
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT--IQKPSEEDE----VIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~--~~~G~~~g~----v~~~L~~kll~rgI~v~~~ 139 (298)
..+||+||+| .|.=.||+ -+.+.++.|++.|.+++-++ ..++..+.+ -.+...+.+...|+++..-
T Consensus 122 ~i~Gk~VlIV-DDvitTG~--Tl~~a~~~L~~~Ga~~v~v~~l~dr~~~g~~~~~~~~~~~~~~~~~~g~~v~sl 193 (226)
T 2ps1_A 122 ALENKRILII-DDVMTAGT--AINEAFEIISNAKGQVVGSIIALDRQEVVSTDDKEGLSATQTVSKKYGIPVLSI 193 (226)
T ss_dssp CCTTCEEEEE-EEEESSSH--HHHHHHHHHHHTTCEEEEEEEEEECCBBSCTTCSSCCBHHHHHHHHHTCCEEEE
T ss_pred CCCcCEEEEE-EecccChH--HHHHHHHHHHHcCCeEEEEEEEEEccCcccccccccchHHHHHHHhcCCeEEEE
Confidence 3589999887 77778898 67799999999999855322 222221111 1122344455568888855
No 70
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=73.82 E-value=12 Score=36.05 Aligned_cols=84 Identities=18% Similarity=0.241 Sum_probs=55.0
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhccC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~aD 152 (298)
+.|+|++|. +..+|- --+|++|++.|++|...=.+.. +..+++.+.|+++..-...+ ...++|
T Consensus 21 ~~~~v~viG--iG~sG~----s~~A~~l~~~G~~V~~~D~~~~--------~~~~~l~~~gi~~~~g~~~~---~~~~~d 83 (494)
T 4hv4_A 21 RVRHIHFVG--IGGAGM----GGIAEVLANEGYQISGSDLAPN--------SVTQHLTALGAQIYFHHRPE---NVLDAS 83 (494)
T ss_dssp -CCEEEEET--TTSTTH----HHHHHHHHHTTCEEEEECSSCC--------HHHHHHHHTTCEEESSCCGG---GGTTCS
T ss_pred cCCEEEEEE--EcHhhH----HHHHHHHHhCCCeEEEEECCCC--------HHHHHHHHCCCEEECCCCHH---HcCCCC
Confidence 358899987 455552 1269999999999986532211 34567888899998642222 245799
Q ss_pred EEEEechhch--HHHHHHhhccC
Q 022363 153 LIVLNTAVAG--KWLDAVLKEDV 173 (298)
Q Consensus 153 LVIaNT~v~g--~wl~~l~~~~~ 173 (298)
+||....+.- +.+.+..+..+
T Consensus 84 ~vV~Spgi~~~~p~~~~a~~~gi 106 (494)
T 4hv4_A 84 VVVVSTAISADNPEIVAAREARI 106 (494)
T ss_dssp EEEECTTSCTTCHHHHHHHHTTC
T ss_pred EEEECCCCCCCCHHHHHHHHCCC
Confidence 9999998853 55555543333
No 71
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=73.51 E-value=27 Score=27.88 Aligned_cols=78 Identities=17% Similarity=0.141 Sum_probs=52.6
Q ss_pred EEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc--CCceeehhch---hHHH-hhh
Q 022363 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR--GVQVISAKGQ---ETIN-TAL 149 (298)
Q Consensus 76 kILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~r--gI~v~~~k~~---~~i~-~A~ 149 (298)
+++.|..--+..|--.+..+||..|.+.|..|.++=... .+ ++..-+... +.+++..... +.+. ...
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~---~~----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 74 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDP---QM----SLTNWSKAGKAAFDVFTAASEKDVYGIRKDLA 74 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT---TC----HHHHHHTTSCCSSEEEECCSHHHHHTHHHHTT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCC---CC----CHHHHHhcCCCCCcEEecCcHHHHHHHHHhcC
Confidence 577788788899999999999999999999998887432 12 222322222 5566654321 1222 345
Q ss_pred ccCEEEEechh
Q 022363 150 KADLIVLNTAV 160 (298)
Q Consensus 150 ~aDLVIaNT~v 160 (298)
++|+||.-|.-
T Consensus 75 ~yD~viiD~~~ 85 (206)
T 4dzz_A 75 DYDFAIVDGAG 85 (206)
T ss_dssp TSSEEEEECCS
T ss_pred CCCEEEEECCC
Confidence 79999999864
No 72
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=73.37 E-value=7 Score=34.52 Aligned_cols=87 Identities=18% Similarity=0.196 Sum_probs=45.1
Q ss_pred ccccCCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhC-CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 61 RIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 61 ~~~~~~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~-G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
...+.+++...|++|+||+++ -||. +=-++++.|.+. |++|..+...... +.+.....++.++..
T Consensus 11 ~~~~~~~~~~~m~~~~vlVtG----atG~--iG~~l~~~L~~~~g~~V~~~~r~~~~--------~~~~~~~~~v~~~~~ 76 (372)
T 3slg_A 11 TLEAQTQGPGSMKAKKVLILG----VNGF--IGHHLSKRILETTDWEVFGMDMQTDR--------LGDLVKHERMHFFEG 76 (372)
T ss_dssp ------------CCCEEEEES----CSSH--HHHHHHHHHHHHSSCEEEEEESCCTT--------TGGGGGSTTEEEEEC
T ss_pred chhhhhcCCcccCCCEEEEEC----CCCh--HHHHHHHHHHhCCCCEEEEEeCChhh--------hhhhccCCCeEEEeC
Confidence 334456677889999988753 2332 556788888887 9999999854331 111111235555532
Q ss_pred --h-chhHHH-hhhccCEEEEechhc
Q 022363 140 --K-GQETIN-TALKADLIVLNTAVA 161 (298)
Q Consensus 140 --k-~~~~i~-~A~~aDLVIaNT~v~ 161 (298)
. ....+. ...++|.||-+....
T Consensus 77 Dl~~d~~~~~~~~~~~d~Vih~A~~~ 102 (372)
T 3slg_A 77 DITINKEWVEYHVKKCDVILPLVAIA 102 (372)
T ss_dssp CTTTCHHHHHHHHHHCSEEEECBCCC
T ss_pred ccCCCHHHHHHHhccCCEEEEcCccc
Confidence 2 234444 456899999766543
No 73
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=72.76 E-value=9.6 Score=32.80 Aligned_cols=64 Identities=19% Similarity=0.247 Sum_probs=41.4
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE---EEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN---WITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~---vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+.+| +||+| .|.=.||+ -+.+.++.|++.|.+++ ++..+. ..+.+-.+..++.+.+.|+++..-
T Consensus 115 ~~~g-~VliV-DDvitTG~--Tl~~a~~~l~~~Ga~~v~v~~l~dr~-~~g~~~l~~~~~~~~~~g~~v~sl 181 (213)
T 1lh0_A 115 ALQG-RVMLV-DDVITAGT--AIRESMEIIQAHGATLAGVLISLDRQ-ERGRGEISAIQEVERDYGCKVISI 181 (213)
T ss_dssp CCCS-EEEEE-CSCCSSSC--HHHHHHHHHHHTTCEEEEEEEEEECC-BBCSSSSBHHHHHHHHHCCEEEEE
T ss_pred CCCC-CEEEE-EecccchH--HHHHHHHHHHHCCCeEEEEEEEEEcc-cCcccchhhHHHHHHHcCCCeEEE
Confidence 5689 88877 77778888 67789999999999854 333332 211111122344455578888754
No 74
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=72.20 E-value=10 Score=32.24 Aligned_cols=61 Identities=20% Similarity=0.261 Sum_probs=43.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC-CchhhhhhhHHHHHHcCCceeeh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS-EEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~-~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
..+|+|++| |+-..-+|+|..|.+.|.+|.++...... ....+...+.+.+.++||++...
T Consensus 143 ~~~~~v~Vi-------G~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~ 204 (320)
T 1trb_A 143 YRNQKVAVI-------GGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTN 204 (320)
T ss_dssp GTTSEEEEE-------CSSHHHHHHHHHHTTTSSEEEEECSSSSCCCCHHHHHHHHHHHHTSSEEEECS
T ss_pred cCCCeEEEE-------CCCHHHHHHHHHHHhcCCeEEEEEeCCccccCHHHHHHHHHhcccCCeEEEcC
Confidence 357889888 34456789999999999999999844322 22344445666677789888755
No 75
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=71.53 E-value=6.5 Score=34.68 Aligned_cols=75 Identities=17% Similarity=0.158 Sum_probs=45.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc----------
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG---------- 141 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~---------- 141 (298)
+++|+|++.- +.+.|-+-..+|++.|++.| +|.++..+... .++.+.. ++.+.++..+..
T Consensus 17 l~~k~Illgv---TGsiaa~k~~~ll~~L~~~g-~V~vv~T~~A~---~fv~~~~---~~~~~~v~~d~~~~~~~~~~~~ 86 (209)
T 1mvl_A 17 PRKPRVLLAA---SGSVAAIKFGNLCHCFTEWA-EVRAVVTKSSL---HFLDKLS---LPQEVTLYTDEDEWSSWNKIGD 86 (209)
T ss_dssp --CCEEEEEE---CSSGGGGGHHHHHHHHHTTS-EEEEEECTGGG---GTCCGGG---SCTTCEEECTTHHHHHCSSTTS
T ss_pred cCCCEEEEEE---eCcHHHHHHHHHHHHHhcCC-CEEEEEcchHH---HhcCHHH---hhcCCeEEeCccccccccccCC
Confidence 5678887753 22222345789999999999 99999966542 3322222 225667776631
Q ss_pred -hhHHHhhhccCEEEE
Q 022363 142 -QETINTALKADLIVL 156 (298)
Q Consensus 142 -~~~i~~A~~aDLVIa 156 (298)
...++.+..+|++++
T Consensus 87 ~i~hi~l~~~aD~mvI 102 (209)
T 1mvl_A 87 PVLHIELRRWADVLVI 102 (209)
T ss_dssp CCHHHHHHHHCSEEEE
T ss_pred CccchhhcccCCEEEE
Confidence 123445678998885
No 76
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=71.38 E-value=27 Score=33.60 Aligned_cols=91 Identities=22% Similarity=0.200 Sum_probs=58.3
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc-----
Q 022363 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG----- 141 (298)
Q Consensus 67 ~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~----- 141 (298)
++++|-+++.|.+++ .+.+|---++..||.+|+..|..|.++...-. ..-....|...-...|++++....
T Consensus 91 ~~i~l~~~~vi~i~G--~~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~--r~aa~~qL~~~~~~~gv~v~~~~~~~~p~ 166 (425)
T 2ffh_A 91 RLPVLKDRNLWFLVG--LQGSGKTTTAAKLALYYKGKGRRPLLVAADTQ--RPAAREQLRLLGEKVGVPVLEVMDGESPE 166 (425)
T ss_dssp CCCCCCSSEEEEEEC--CTTSSHHHHHHHHHHHHHTTTCCEEEEECCSS--CHHHHHHHHHHHHHHTCCEEECCTTCCHH
T ss_pred ccccCCCCeEEEEEC--CCCCCHHHHHHHHHHHHHHcCCeEEEeecccc--CchhHHHHHHhcccCCccEEecCCCCCHH
Confidence 355555566666665 48899999999999999999999988874321 111111122222234888886421
Q ss_pred ---hhHHHhh--hccCEEEEechhc
Q 022363 142 ---QETINTA--LKADLIVLNTAVA 161 (298)
Q Consensus 142 ---~~~i~~A--~~aDLVIaNT~v~ 161 (298)
.+.+..+ .++|+||+-|+-.
T Consensus 167 ~i~~~~l~~~~~~~~DvVIIDTaG~ 191 (425)
T 2ffh_A 167 SIRRRVEEKARLEARDLILVDTAGR 191 (425)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCC
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCc
Confidence 1233333 6899999999743
No 77
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=71.34 E-value=6.6 Score=34.41 Aligned_cols=86 Identities=19% Similarity=0.134 Sum_probs=41.9
Q ss_pred ccCCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee-h-h
Q 022363 63 ATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-A-K 140 (298)
Q Consensus 63 ~~~~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~-~-k 140 (298)
+++.+|..++++|+||+.. -||. +=-++++.|.+.|++|..+....... .+. +.+ + .++.++. | .
T Consensus 10 ~~~~~~~~~~~~~~vlVTG----atG~--iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~---l~~-~--~~~~~~~~Dl~ 76 (333)
T 2q1w_A 10 HSSGLVPRGSHMKKVFITG----ICGQ--IGSHIAELLLERGDKVVGIDNFATGR-REH---LKD-H--PNLTFVEGSIA 76 (333)
T ss_dssp -----------CCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEECCSSCC-GGG---SCC-C--TTEEEEECCTT
T ss_pred ccCceeeecCCCCEEEEeC----CccH--HHHHHHHHHHHCCCEEEEEECCCccc-hhh---Hhh-c--CCceEEEEeCC
Confidence 3456888999999887753 2333 55688889999999999887543211 110 100 0 2333332 1 2
Q ss_pred chhHHH-hhhc--cCEEEEechhc
Q 022363 141 GQETIN-TALK--ADLIVLNTAVA 161 (298)
Q Consensus 141 ~~~~i~-~A~~--aDLVIaNT~v~ 161 (298)
...++. ...+ +|.||-|....
T Consensus 77 d~~~~~~~~~~~~~D~vih~A~~~ 100 (333)
T 2q1w_A 77 DHALVNQLIGDLQPDAVVHTAASY 100 (333)
T ss_dssp CHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CHHHHHHHHhccCCcEEEECceec
Confidence 233443 2334 99999887643
No 78
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=71.32 E-value=5.7 Score=32.01 Aligned_cols=72 Identities=19% Similarity=0.169 Sum_probs=46.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhC-CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee-h-hchhHHHh-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-A-KGQETINT- 147 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~-G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~-~-k~~~~i~~- 147 (298)
+.+++|++++ ++..|. .+|+.|++. |++|.++-.. + .-.+++.+.|+.++. + .....+..
T Consensus 37 ~~~~~v~IiG--~G~~G~-----~~a~~L~~~~g~~V~vid~~-~--------~~~~~~~~~g~~~~~gd~~~~~~l~~~ 100 (183)
T 3c85_A 37 PGHAQVLILG--MGRIGT-----GAYDELRARYGKISLGIEIR-E--------EAAQQHRSEGRNVISGDATDPDFWERI 100 (183)
T ss_dssp CTTCSEEEEC--CSHHHH-----HHHHHHHHHHCSCEEEEESC-H--------HHHHHHHHTTCCEEECCTTCHHHHHTB
T ss_pred CCCCcEEEEC--CCHHHH-----HHHHHHHhccCCeEEEEECC-H--------HHHHHHHHCCCCEEEcCCCCHHHHHhc
Confidence 4577899996 455554 567888888 9998887632 1 113456667888763 2 22333433
Q ss_pred --hhccCEEEEech
Q 022363 148 --ALKADLIVLNTA 159 (298)
Q Consensus 148 --A~~aDLVIaNT~ 159 (298)
..++|.||+.|-
T Consensus 101 ~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 101 LDTGHVKLVLLAMP 114 (183)
T ss_dssp CSCCCCCEEEECCS
T ss_pred cCCCCCCEEEEeCC
Confidence 358999998654
No 79
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=71.13 E-value=14 Score=34.22 Aligned_cols=82 Identities=20% Similarity=0.231 Sum_probs=57.0
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC----CCchhhhhhhHHHHHHcCCceeehhchhHH---
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP----SEEDEVIYSLEHKMWDRGVQVISAKGQETI--- 145 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G----~~~g~v~~~L~~kll~rgI~v~~~k~~~~i--- 145 (298)
.+|++++| |+-..-+|+|..|++.|.+|.++..... ..+.++...+.+.+.++|+.+.....-.++
T Consensus 148 ~~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~ 220 (452)
T 2cdu_A 148 KAKTITII-------GSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEV 220 (452)
T ss_dssp GCSEEEEE-------CCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEE
T ss_pred cCCeEEEE-------CcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcC
Confidence 47888887 5666789999999999999999884432 234566667888888899988754211111
Q ss_pred -------H---hhhccCEEEEechhc
Q 022363 146 -------N---TALKADLIVLNTAVA 161 (298)
Q Consensus 146 -------~---~A~~aDLVIaNT~v~ 161 (298)
. ....+|.||..|-..
T Consensus 221 ~~~v~~v~~~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 221 DDEIITKTLDGKEIKSDIAILCIGFR 246 (452)
T ss_dssp TTEEEEEETTSCEEEESEEEECCCEE
T ss_pred CCeEEEEEeCCCEEECCEEEECcCCC
Confidence 1 123689999877643
No 80
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=70.82 E-value=23 Score=31.06 Aligned_cols=81 Identities=14% Similarity=0.133 Sum_probs=48.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-hh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TA 148 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~-~A 148 (298)
|..|+||+++ -||. +=-++++.|.+.|++|.++........... ...+.+...|+.++.. ....++. .+
T Consensus 8 M~~~~IlVtG----atG~--iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--~~~~~l~~~~v~~~~~Dl~d~~~l~~~~ 79 (346)
T 3i6i_A 8 SPKGRVLIAG----ATGF--IGQFVATASLDAHRPTYILARPGPRSPSKA--KIFKALEDKGAIIVYGLINEQEAMEKIL 79 (346)
T ss_dssp ---CCEEEEC----TTSH--HHHHHHHHHHHTTCCEEEEECSSCCCHHHH--HHHHHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred CCCCeEEEEC----CCcH--HHHHHHHHHHHCCCCEEEEECCCCCChhHH--HHHHHHHhCCcEEEEeecCCHHHHHHHH
Confidence 6677788764 3332 445778888889999998885542211111 2234556678888743 2334444 44
Q ss_pred h--ccCEEEEechh
Q 022363 149 L--KADLIVLNTAV 160 (298)
Q Consensus 149 ~--~aDLVIaNT~v 160 (298)
. ++|.||.+...
T Consensus 80 ~~~~~d~Vi~~a~~ 93 (346)
T 3i6i_A 80 KEHEIDIVVSTVGG 93 (346)
T ss_dssp HHTTCCEEEECCCG
T ss_pred hhCCCCEEEECCch
Confidence 5 89999987764
No 81
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=70.41 E-value=14 Score=33.90 Aligned_cols=89 Identities=21% Similarity=0.243 Sum_probs=61.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhHH---
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQETI--- 145 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~g~v~~~L~~kll~rgI~v~~~k~~~~i--- 145 (298)
.+|+|++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++||++.......++
T Consensus 144 ~~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 216 (408)
T 2gqw_A 144 PQSRLLIV-------GGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDG 216 (408)
T ss_dssp TTCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEETT
T ss_pred cCCeEEEE-------CCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEECC
Confidence 37888888 55567899999999999999998854321 23456667788888889998765222111
Q ss_pred --H----hhhccCEEEEechhc--hHHHHHH
Q 022363 146 --N----TALKADLIVLNTAVA--GKWLDAV 168 (298)
Q Consensus 146 --~----~A~~aDLVIaNT~v~--g~wl~~l 168 (298)
. ....+|+||..|-.. ..+++++
T Consensus 217 ~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~ 247 (408)
T 2gqw_A 217 VVLLDDGTRIAADMVVVGIGVLANDALARAA 247 (408)
T ss_dssp EEEETTSCEEECSEEEECSCEEECCHHHHHH
T ss_pred EEEECCCCEEEcCEEEECcCCCccHHHHHhC
Confidence 1 124789999877654 2466654
No 82
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=70.17 E-value=25 Score=31.80 Aligned_cols=50 Identities=22% Similarity=0.235 Sum_probs=34.2
Q ss_pred EEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee
Q 022363 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI 137 (298)
Q Consensus 76 kILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~ 137 (298)
||+|+++.. .|-=.=++.||+.|++.|++|.+++.. ...+.+.+.|++.+
T Consensus 2 rIli~~~gt--~Ghv~p~~~La~~L~~~Gh~V~v~~~~----------~~~~~v~~~g~~~~ 51 (404)
T 3h4t_A 2 GVLITGCGS--RGDTEPLVALAARLRELGADARMCLPP----------DYVERCAEVGVPMV 51 (404)
T ss_dssp CEEEEEESS--HHHHHHHHHHHHHHHHTTCCEEEEECG----------GGHHHHHHTTCCEE
T ss_pred eEEEEeCCC--CccHHHHHHHHHHHHHCCCeEEEEeCH----------HHHHHHHHcCCcee
Confidence 688888642 243334788999999999999999832 12445555666655
No 83
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=70.03 E-value=9.9 Score=31.72 Aligned_cols=58 Identities=17% Similarity=0.269 Sum_probs=39.1
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEE-e-ccCCCCchhhhhhhHHHHHHcCCcee
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWI-T-IQKPSEEDEVIYSLEHKMWDRGVQVI 137 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL-~-~~~G~~~g~v~~~L~~kll~rgI~v~ 137 (298)
..+||+||+| .|.-.||+ -|.+.++.|++.|...+-+ + ..++.. +-.+++.+.|+++.
T Consensus 117 ~~~gk~VllV-DDvitTG~--Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~------~~~~~l~~~~~~~~ 176 (197)
T 1y0b_A 117 LSDQDHVLII-DDFLANGQ--AAHGLVSIVKQAGASIAGIGIVIEKSFQ------PGRDELVKLGYRVE 176 (197)
T ss_dssp CCTTCEEEEE-EEEESSCH--HHHHHHHHHHHTTCEEEEEEEEEEETTS------THHHHHHHTTCCEE
T ss_pred cCCcCEEEEE-EcccccCH--HHHHHHHHHHHCCCEEEEEEEEEEeccc------chhhhHHhcCCcEE
Confidence 3589999887 78888999 6679999999999885422 2 333211 11355655666655
No 84
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=69.88 E-value=17 Score=31.21 Aligned_cols=50 Identities=16% Similarity=0.123 Sum_probs=27.0
Q ss_pred cCccccccCCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 57 QSVPRIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 57 ~~~~~~~~~~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
.+.+....+++|..-+++|++|+.. -+|+ +=.++|+.|.+.|++|.++..
T Consensus 4 ~~~~~~~~~~~~~~~l~~k~~lVTG----as~g--IG~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 4 DKIHHHHHHMKEVFDLRGRVALVTG----GSRG--LGFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp -------------CCCTTCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred cccCCCCCCCCCCcCCCCCEEEEEC----CCCH--HHHHHHHHHHHCCCEEEEEeC
Confidence 3444445556777778888776653 2332 556889999999999887763
No 85
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=69.59 E-value=9.1 Score=34.10 Aligned_cols=60 Identities=23% Similarity=0.176 Sum_probs=43.2
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe---ccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT---IQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~---~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
.+.+||+||+| .|.=.||+ -+.+.++.|++.|.+++-++ .+.. .+-.+++.+.|+++..-
T Consensus 133 ~~~~Gk~VLIV-DDvitTG~--Tl~~a~~~L~~~Ga~vv~v~~l~~~~~-------~~~~e~l~~~gi~v~sL 195 (234)
T 3m3h_A 133 KAEKGQKVVVV-EDLISTGG--SAITCVEALREAGCEVLGIVSIFTYEL-------EAGKEKLEAANVASYSL 195 (234)
T ss_dssp CCCTTCEEEEE-EEEESSSH--HHHHHHHHHHHTTCEEEEEEEEEECCC-------HHHHHHHHHTTCCEEES
T ss_pred ccCCCCEEEEE-ecccchhH--HHHHHHHHHHHCCCEEEEEEEEEECcC-------chHHHHHHhcCCCEEEE
Confidence 35689999888 56667787 56799999999999865333 3321 13357888889998855
No 86
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=69.40 E-value=37 Score=31.09 Aligned_cols=119 Identities=12% Similarity=0.123 Sum_probs=70.1
Q ss_pred EEEEeccCC-CCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhccCEEE
Q 022363 77 VLLVSHELS-LSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIV 155 (298)
Q Consensus 77 ILLISHELS-~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~aDLVI 155 (298)
.+.-..+.+ .++|+..--..+..+++.|++-.-+..... ..+....+...+.. .+....+.|.||
T Consensus 14 ~i~~~~~~~~~~a~~ka~~dv~~i~~~~G~~~l~~~~~~~--~~~~~~~~~~~~~~------------~~~~~~~~DvIi 79 (339)
T 3rhz_A 14 YITNINGQSIQSTAQLCQNTVTDVAVSLGYRELGIYCYQI--HTDSESELSKRLDG------------IVAGLRHGDVVI 79 (339)
T ss_dssp EEEEEESSCTTCHHHHHHHHHHHHHHHTTCEEEEEECCCG--GGSCHHHHHHHHHH------------HTTTCCTTCEEE
T ss_pred eeecccCccccchHHHHHHHHHHHHHHCCCeEEEeecccc--ccccHHHHHHHHHH------------HHhcCCCCCEEE
Confidence 444445533 458888888999999999999766652211 01111112222210 122477999999
Q ss_pred Eechh------chHHHHHHhhccCCCCCCceEEEeeecccc------ccc------cccccccccccccccccHHHHHHH
Q 022363 156 LNTAV------AGKWLDAVLKEDVPRVLPNVLWWIHEMRGH------YFK------LDYVKHLPLVAGAMIDSHVTAEYW 217 (298)
Q Consensus 156 aNT~v------~g~wl~~l~~~~~p~~~~pVIWWIHE~r~~------Yf~------l~~vkhLp~v~~~~~~S~AtA~yw 217 (298)
.-+=. .+.++..+.+.+. |++-+|||.... |+. .++..+++.. |+..+++.
T Consensus 80 ~q~P~~~~~~~~~~~~~~lk~~~~-----k~i~~ihDl~pl~~~~~~~~~~~E~~~y~~aD~Ii~~------S~~~~~~l 148 (339)
T 3rhz_A 80 FQTPTWNTTEFDEKLMNKLKLYDI-----KIVLFIHDVVPLMFSGNFYLMDRTIAYYNKADVVVAP------SQKMIDKL 148 (339)
T ss_dssp EEECCSSCHHHHHHHHHHHTTSSC-----EEEEEESCCHHHHCGGGGGGHHHHHHHHTTCSEEEES------CHHHHHHH
T ss_pred EeCCCcchhhHHHHHHHHHHhcCC-----EEEEEecccHHhhCccchhhHHHHHHHHHHCCEEEEC------CHHHHHHH
Confidence 85432 2455665543333 999999998721 111 2344445555 99999998
Q ss_pred HHh
Q 022363 218 KNR 220 (298)
Q Consensus 218 ~~r 220 (298)
+++
T Consensus 149 ~~~ 151 (339)
T 3rhz_A 149 RDF 151 (339)
T ss_dssp HHT
T ss_pred HHc
Confidence 774
No 87
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=68.91 E-value=32 Score=28.70 Aligned_cols=89 Identities=15% Similarity=-0.003 Sum_probs=50.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhccC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~aD 152 (298)
++++|-+|..+.+..=-.-++-.+-..+++.|+++.+...... .+- +.+. .+.+ ...++|
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~---~~~----~~~~------------~~~l-~~~~vd 66 (293)
T 3l6u_A 7 KRNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQNS---RIS----EREQ------------ILEF-VHLKVD 66 (293)
T ss_dssp --CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSC---HHH----HHHH------------HHHH-HHTTCS
T ss_pred CCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCC---HHH----HHHH------------HHHH-HHcCCC
Confidence 4567888887765432333455566778888998887764322 111 0011 1111 246889
Q ss_pred EEEEechhch---HHHHHHhhccCCCCCCceEEEeee
Q 022363 153 LIVLNTAVAG---KWLDAVLKEDVPRVLPNVLWWIHE 186 (298)
Q Consensus 153 LVIaNT~v~g---~wl~~l~~~~~p~~~~pVIWWIHE 186 (298)
.||+...... ..++.+.+.++ |+|.+=.+
T Consensus 67 giI~~~~~~~~~~~~~~~~~~~~i-----PvV~~~~~ 98 (293)
T 3l6u_A 67 AIFITTLDDVYIGSAIEEAKKAGI-----PVFAIDRM 98 (293)
T ss_dssp EEEEECSCTTTTHHHHHHHHHTTC-----CEEEESSC
T ss_pred EEEEecCChHHHHHHHHHHHHcCC-----CEEEecCC
Confidence 8888655333 66777765566 67766443
No 88
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=68.86 E-value=20 Score=30.09 Aligned_cols=87 Identities=10% Similarity=0.043 Sum_probs=44.5
Q ss_pred CCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee----hh
Q 022363 65 KSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS----AK 140 (298)
Q Consensus 65 ~~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~----~k 140 (298)
++.|....++|+||+.. |+-=+=.++|+.|.+.|+.|.++..+..+... .+.+++...+..+.. -.
T Consensus 4 ~~~~~~~~~~k~vlITG------as~giG~~ia~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~Dv~ 73 (256)
T 3ezl_A 4 HHHHHMVMSQRIAYVTG------GMGGIGTSICQRLHKDGFRVVAGCGPNSPRRV----KWLEDQKALGFDFYASEGNVG 73 (256)
T ss_dssp ---------CEEEEETT------TTSHHHHHHHHHHHHTTEEEEEEECTTCSSHH----HHHHHHHHTTCCCEEEECCTT
T ss_pred CCCCCCCCCCCEEEEEC------CCChHHHHHHHHHHHCCCEEEEEeCCCHHHHH----HHHHHHHhcCCeeEEEecCCC
Confidence 35677778888777632 22235578999999999999887744432211 223445444544321 12
Q ss_pred chhHHH--------hhhccCEEEEechhc
Q 022363 141 GQETIN--------TALKADLIVLNTAVA 161 (298)
Q Consensus 141 ~~~~i~--------~A~~aDLVIaNT~v~ 161 (298)
..++++ ....+|.+|.|..+.
T Consensus 74 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~~ 102 (256)
T 3ezl_A 74 DWDSTKQAFDKVKAEVGEIDVLVNNAGIT 102 (256)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 222222 223789999887653
No 89
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=68.31 E-value=5.9 Score=38.22 Aligned_cols=79 Identities=18% Similarity=0.130 Sum_probs=49.2
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee-ehh-chhHHHh
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI-SAK-GQETINT 147 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~-~~k-~~~~i~~ 147 (298)
.+.+||++.+. |.|-....+++.|++.|.+++.+....+++ +. + +.. . -.++ .|- ..++.-.
T Consensus 309 ~~l~Gkrv~i~-------~~~~~~~~l~~~L~elGm~vv~~~~~~~~~--~~----~-~~~-~-~~v~~~D~~~le~~i~ 372 (458)
T 3pdi_B 309 FMLSSARTAIA-------ADPDLLLGFDALLRSMGAHTVAAVVPARAA--AL----V-DSP-L-PSVRVGDLEDLEHAAR 372 (458)
T ss_dssp HHHTTCEEEEE-------CCHHHHHHHHHHHHTTTCEEEEEEESSCCS--CC----T-TTT-S-SCEEESHHHHHHHHHH
T ss_pred HhcCCCEEEEE-------CCcHHHHHHHHHHHHCCCEEEEEEECCCCh--hh----h-hCc-c-CcEEeCCHHHHHHHHH
Confidence 57889999984 567788999999999999999888544321 10 0 000 0 1223 221 1122113
Q ss_pred hhccCEEEEechhchHHHH
Q 022363 148 ALKADLIVLNTAVAGKWLD 166 (298)
Q Consensus 148 A~~aDLVIaNT~v~g~wl~ 166 (298)
..++||+|.|+- ++++.
T Consensus 373 ~~~pDllig~~~--~~~~a 389 (458)
T 3pdi_B 373 AGQAQLVIGNSH--ALASA 389 (458)
T ss_dssp HHTCSEEEECTT--HHHHH
T ss_pred hcCCCEEEEChh--HHHHH
Confidence 568999999987 44443
No 90
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=68.16 E-value=15 Score=31.15 Aligned_cols=39 Identities=15% Similarity=0.125 Sum_probs=30.9
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
.-++||+||+| .|.=.||+ -|.++++.|++.|...+.++
T Consensus 116 ~~~~gk~VllV-DDvi~TG~--Tl~~a~~~L~~~ga~~V~v~ 154 (208)
T 1wd5_A 116 AARKGRDVVLV-DDGVATGA--SMEAALSVVFQEGPRRVVVA 154 (208)
T ss_dssp CCCTTSEEEEE-CSCBSSCH--HHHHHHHHHHTTCCSEEEEE
T ss_pred CCCCCCEEEEE-CCCccHHH--HHHHHHHHHHHcCCCEEEEE
Confidence 34789998887 78888999 67789999999998744433
No 91
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=68.08 E-value=14 Score=34.02 Aligned_cols=82 Identities=23% Similarity=0.302 Sum_probs=56.5
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhH----
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQET---- 144 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~g~v~~~L~~kll~rgI~v~~~k~~~~---- 144 (298)
.+|++++| |+-..-+|+|..|++.|.+|.++...... .+.++...+.+.+.++|+++........
T Consensus 148 ~~~~vvIi-------G~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~ 220 (447)
T 1nhp_A 148 EVNNVVVI-------GSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGD 220 (447)
T ss_dssp TCCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECS
T ss_pred CCCeEEEE-------CCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc
Confidence 57888887 56667899999999999999998844321 3455666777888888988875421111
Q ss_pred -----HH---hhhccCEEEEechhc
Q 022363 145 -----IN---TALKADLIVLNTAVA 161 (298)
Q Consensus 145 -----i~---~A~~aDLVIaNT~v~ 161 (298)
+. ....+|.||..|-..
T Consensus 221 ~~v~~v~~~~~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 221 GRVQKVVTDKNAYDADLVVVAVGVR 245 (447)
T ss_dssp SBCCEEEESSCEEECSEEEECSCEE
T ss_pred CcEEEEEECCCEEECCEEEECcCCC
Confidence 11 123689999887653
No 92
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=68.04 E-value=19 Score=32.25 Aligned_cols=60 Identities=13% Similarity=0.128 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc-hhHHH----hhhccCEEEEechhc
Q 022363 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG-QETIN----TALKADLIVLNTAVA 161 (298)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~-~~~i~----~A~~aDLVIaNT~v~ 161 (298)
.=..+|+.+.+.|++|.++.+..... . + ...|+.+++... ++.+. .+.++|.+|.|.+|+
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~~~~~-~----~-----~~~~~~~~~v~s~~em~~~v~~~~~~~Dili~aAAvs 95 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTKRALK-P----E-----PHPNLSIREITNTKDLLIEMQERVQDYQVLIHSMAVS 95 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTSCC-C----C-----CCTTEEEEECCSHHHHHHHHHHHGGGCSEEEECSBCC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCcccc-c----c-----CCCCeEEEEHhHHHHHHHHHHHhcCCCCEEEEcCccc
Confidence 44578999999999999998543211 0 0 012455554422 22222 456899999999875
No 93
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=67.20 E-value=14 Score=31.71 Aligned_cols=61 Identities=18% Similarity=0.256 Sum_probs=42.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC-CchhhhhhhHHHHHHcCCceeeh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS-EEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~-~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
.++|+|++| |+-..-+|+|..|.+.|.+|.++.....- ...+...-|++.+.++||++...
T Consensus 150 ~~~~~v~vi-------G~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~~~~~~~l~~~l~~~gv~v~~~ 211 (335)
T 2zbw_A 150 FQGKRVLIV-------GGGDSAVDWALNLLDTARRITLIHRRPQFRAHEASVKELMKAHEEGRLEVLTP 211 (335)
T ss_dssp GTTCEEEEE-------CSSHHHHHHHHHTTTTSSEEEEECSSSSCCSCHHHHHHHHHHHHTTSSEEETT
T ss_pred cCCCEEEEE-------CCCHHHHHHHHHHHhhCCEEEEEEcCCccCccHHHHHHHHhccccCCeEEecC
Confidence 367888887 44457889999999999999998744321 22344445666666669988755
No 94
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=67.14 E-value=16 Score=31.31 Aligned_cols=75 Identities=17% Similarity=0.099 Sum_probs=45.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCceeehhc---hhHHHhhh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVISAKG---QETINTAL 149 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~r-gI~v~~~k~---~~~i~~A~ 149 (298)
+|+|++. .+.+.|-+-..++++.|++.|++|+++..+... .++.+. .+... | +|+.+.. ..-+....
T Consensus 5 ~k~Illg---vTGs~aa~k~~~ll~~L~~~g~~V~vv~T~~A~---~fi~~~--~l~~l~~-~v~~~~~~~~~~hi~l~~ 75 (175)
T 3qjg_A 5 GENVLIC---LCGSVNSINISHYIIELKSKFDEVNVIASTNGR---KFINGE--ILKQFCD-NYYDEFEDPFLNHVDIAN 75 (175)
T ss_dssp CCEEEEE---ECSSGGGGGHHHHHHHHTTTCSEEEEEECTGGG---GGSCHH--HHHHHCS-CEECTTTCTTCCHHHHHH
T ss_pred CCEEEEE---EeCHHHHHHHHHHHHHHHHCCCEEEEEECcCHH---HHhhHH--HHHHhcC-CEEecCCCCccccccccc
Confidence 3666654 223323335789999999999999999977552 332222 12222 5 7776642 11344567
Q ss_pred ccCEEEEe
Q 022363 150 KADLIVLN 157 (298)
Q Consensus 150 ~aDLVIaN 157 (298)
.+|++++=
T Consensus 76 ~aD~~vVa 83 (175)
T 3qjg_A 76 KHDKIIIL 83 (175)
T ss_dssp TCSEEEEE
T ss_pred hhCEEEEe
Confidence 89998863
No 95
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=66.92 E-value=10 Score=33.94 Aligned_cols=85 Identities=9% Similarity=0.121 Sum_probs=48.1
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhC-CC-eEEEEeccCCCCchhhhhhhHHHHHHcCCceee--hhc
Q 022363 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGV-GT-KVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--AKG 141 (298)
Q Consensus 66 ~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~-G~-~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~--~k~ 141 (298)
+.--++|++|+||+.+ -||. +=.++++.|.+. |. +|.++... .. . ...+.+++...++..+. -..
T Consensus 13 ~~~~~~~~~k~vlVTG----atG~--iG~~l~~~L~~~~g~~~V~~~~r~-~~---~-~~~~~~~~~~~~v~~~~~Dl~d 81 (344)
T 2gn4_A 13 PNHQNMLDNQTILITG----GTGS--FGKCFVRKVLDTTNAKKIIVYSRD-EL---K-QSEMAMEFNDPRMRFFIGDVRD 81 (344)
T ss_dssp ---CCTTTTCEEEEET----TTSH--HHHHHHHHHHHHCCCSEEEEEESC-HH---H-HHHHHHHHCCTTEEEEECCTTC
T ss_pred ccHHHhhCCCEEEEEC----CCcH--HHHHHHHHHHhhCCCCEEEEEECC-hh---h-HHHHHHHhcCCCEEEEECCCCC
Confidence 3445678899887763 2333 556788888888 97 77777632 21 1 11222333223454442 133
Q ss_pred hhHHH-hhhccCEEEEechhc
Q 022363 142 QETIN-TALKADLIVLNTAVA 161 (298)
Q Consensus 142 ~~~i~-~A~~aDLVIaNT~v~ 161 (298)
..++. ...++|.||-|.+..
T Consensus 82 ~~~l~~~~~~~D~Vih~Aa~~ 102 (344)
T 2gn4_A 82 LERLNYALEGVDICIHAAALK 102 (344)
T ss_dssp HHHHHHHTTTCSEEEECCCCC
T ss_pred HHHHHHHHhcCCEEEECCCCC
Confidence 44454 455899999988654
No 96
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=66.60 E-value=23 Score=30.74 Aligned_cols=74 Identities=15% Similarity=0.193 Sum_probs=46.9
Q ss_pred CchHHHHHHHHHHHhC--CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee--hhc-------hhHH-H--hhhccCE
Q 022363 88 GGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--AKG-------QETI-N--TALKADL 153 (298)
Q Consensus 88 GAPLlLleLA~~Lkq~--G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~--~k~-------~~~i-~--~A~~aDL 153 (298)
|.|-.+..+.+.|.+. +++++.+..++++. +..+...+.|||++. .+. .+++ + ...++|+
T Consensus 12 G~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~------~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dl 85 (212)
T 3av3_A 12 GSGTNFQAIVDAAKRGDLPARVALLVCDRPGA------KVIERAARENVPAFVFSPKDYPSKAAFESEILRELKGRQIDW 85 (212)
T ss_dssp SSCHHHHHHHHHHHTTCCCEEEEEEEESSTTC------HHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCE
T ss_pred CCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCc------HHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHHhcCCCE
Confidence 4455788888888877 68888777665431 456778888999983 211 1122 2 3558999
Q ss_pred EEEec---hhchHHHHH
Q 022363 154 IVLNT---AVAGKWLDA 167 (298)
Q Consensus 154 VIaNT---~v~g~wl~~ 167 (298)
|++-. ++....++.
T Consensus 86 iv~a~y~~il~~~~l~~ 102 (212)
T 3av3_A 86 IALAGYMRLIGPTLLSA 102 (212)
T ss_dssp EEESSCCSCCCHHHHHH
T ss_pred EEEchhhhhCCHHHHhh
Confidence 99743 444445553
No 97
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=66.52 E-value=16 Score=34.96 Aligned_cols=73 Identities=16% Similarity=0.109 Sum_probs=48.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeehhchhHHHhhhc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISAKGQETINTALK 150 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~-rgI~v~~~k~~~~i~~A~~ 150 (298)
++||+||+|. |+ -+-...++.|.+.|++|.++..+- ..++ .++.+ .++..+...+... .+.+
T Consensus 10 l~~~~vlVvG------gG-~va~~k~~~L~~~ga~V~vi~~~~---~~~~-----~~l~~~~~i~~~~~~~~~~--~l~~ 72 (457)
T 1pjq_A 10 LRDRDCLIVG------GG-DVAERKARLLLEAGARLTVNALTF---IPQF-----TVWANEGMLTLVEGPFDET--LLDS 72 (457)
T ss_dssp CBTCEEEEEC------CS-HHHHHHHHHHHHTTBEEEEEESSC---CHHH-----HHHHTTTSCEEEESSCCGG--GGTT
T ss_pred CCCCEEEEEC------CC-HHHHHHHHHHHhCcCEEEEEcCCC---CHHH-----HHHHhcCCEEEEECCCCcc--ccCC
Confidence 4789999883 33 367788899999999999998432 2222 33333 4677766544332 2468
Q ss_pred cCEEEEechhc
Q 022363 151 ADLIVLNTAVA 161 (298)
Q Consensus 151 aDLVIaNT~v~ 161 (298)
+|+||+.|-..
T Consensus 73 ~~lVi~at~~~ 83 (457)
T 1pjq_A 73 CWLAIAATDDD 83 (457)
T ss_dssp CSEEEECCSCH
T ss_pred ccEEEEcCCCH
Confidence 99999988653
No 98
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=66.09 E-value=19 Score=33.20 Aligned_cols=59 Identities=22% Similarity=0.363 Sum_probs=44.1
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+|+|++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++|+++...
T Consensus 170 ~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 231 (455)
T 1ebd_A 170 PKSLVVI-------GGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTN 231 (455)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEES
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeC
Confidence 5778887 44456789999999999999998844321 34556666788888889988764
No 99
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=66.08 E-value=8.5 Score=36.07 Aligned_cols=80 Identities=21% Similarity=0.349 Sum_probs=55.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC---CCCchhhhhhhHHHHHHcCCceeehhchhHH-----
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK---PSEEDEVIYSLEHKMWDRGVQVISAKGQETI----- 145 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~---G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i----- 145 (298)
+|++++| |+-..-+|+|..|++.|.+|.++.... +..+.++...+.+.+.++|+++........+
T Consensus 191 ~~~v~Vi-------GgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~ 263 (484)
T 3o0h_A 191 PKSIVIV-------GGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTEN 263 (484)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSS
T ss_pred CCcEEEE-------CcCHHHHHHHHHHHHcCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCC
Confidence 6788888 444567899999999999999887443 1234566677888888889998864211111
Q ss_pred ----H----hhhccCEEEEechh
Q 022363 146 ----N----TALKADLIVLNTAV 160 (298)
Q Consensus 146 ----~----~A~~aDLVIaNT~v 160 (298)
. ....+|.||..|-.
T Consensus 264 ~v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 264 CYNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp SEEEEETTSCEEEESEEEECCCE
T ss_pred EEEEEECCCcEEEcCEEEEeeCC
Confidence 1 12368999987764
No 100
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=66.05 E-value=29 Score=33.71 Aligned_cols=84 Identities=20% Similarity=0.211 Sum_probs=56.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc--------hhH
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--------QET 144 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~--------~~~ 144 (298)
+.+.|++++. +.+|=--+...||.+|++.|..|.++.+.-.- ...+.-|..--...|++++.... ...
T Consensus 99 ~p~vIlivG~--~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R--~aa~eqL~~~~~~~gvpv~~~~~~~dp~~i~~~a 174 (443)
T 3dm5_A 99 KPTILLMVGI--QGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR--PGAYHQLRQLLDRYHIEVFGNPQEKDAIKLAKEG 174 (443)
T ss_dssp SSEEEEEECC--TTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS--THHHHHHHHHHGGGTCEEECCTTCCCHHHHHHHH
T ss_pred CCeEEEEECc--CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc--hhHHHHHHHHHHhcCCcEEecCCCCCHHHHHHHH
Confidence 3567777776 88999999999999999999999998844221 11112233333344888885311 123
Q ss_pred HHhhh--ccCEEEEechh
Q 022363 145 INTAL--KADLIVLNTAV 160 (298)
Q Consensus 145 i~~A~--~aDLVIaNT~v 160 (298)
+..+. ++|+||+-|+-
T Consensus 175 l~~a~~~~~DvVIIDTaG 192 (443)
T 3dm5_A 175 VDYFKSKGVDIIIVDTAG 192 (443)
T ss_dssp HHHHHHTTCSEEEEECCC
T ss_pred HHHHHhCCCCEEEEECCC
Confidence 33343 49999999984
No 101
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=65.80 E-value=81 Score=28.82 Aligned_cols=37 Identities=19% Similarity=-0.002 Sum_probs=25.3
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhC-CCeEEEEe-ccC
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWIT-IQK 114 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~-G~~V~vL~-~~~ 114 (298)
|||++|+=+- +|. +.+..+.+.|++. |++++++. +++
T Consensus 26 ~ki~~v~Gtr--~~~-~~~a~li~~l~~~~~~~~~~~~tG~h 64 (396)
T 3dzc_A 26 KKVLIVFGTR--PEA-IKMAPLVQQLCQDNRFVAKVCVTGQH 64 (396)
T ss_dssp EEEEEEECSH--HHH-HHHHHHHHHHHHCTTEEEEEEECCSS
T ss_pred CeEEEEEecc--HhH-HHHHHHHHHHHhCCCCcEEEEEeccc
Confidence 6899988443 344 4567788888886 78886554 444
No 102
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=65.47 E-value=16 Score=33.76 Aligned_cols=88 Identities=18% Similarity=0.217 Sum_probs=58.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchh-----
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQE----- 143 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~g~v~~~L~~kll~rgI~v~~~k~~~----- 143 (298)
.+|+|++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++|+++.......
T Consensus 148 ~~~~vvVi-------GgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 220 (431)
T 1q1r_A 148 ADNRLVVI-------GGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMS 220 (431)
T ss_dssp TTCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEC
T ss_pred cCCeEEEE-------CCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEec
Confidence 47888888 44456789999999999999988744322 234555667788888899887541111
Q ss_pred -------HHH----hhhccCEEEEechhc--hHHHHH
Q 022363 144 -------TIN----TALKADLIVLNTAVA--GKWLDA 167 (298)
Q Consensus 144 -------~i~----~A~~aDLVIaNT~v~--g~wl~~ 167 (298)
.+. ....+|+||..|-.. ..++++
T Consensus 221 ~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~ 257 (431)
T 1q1r_A 221 TDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASA 257 (431)
T ss_dssp TTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHH
T ss_pred cCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhc
Confidence 111 124689999877543 245554
No 103
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=65.43 E-value=15 Score=34.48 Aligned_cols=82 Identities=18% Similarity=0.291 Sum_probs=57.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchhHH----
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQETI---- 145 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~g~v~~~L~~kll~rgI~v~~~k~~~~i---- 145 (298)
.+|+|++| |+-..-+|+|..|++.|.+|.++..... ....++...+.+.+.++|+++........+
T Consensus 185 ~~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~ 257 (480)
T 3cgb_A 185 KVEDVTII-------GGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNE 257 (480)
T ss_dssp CCCEEEEE-------CCHHHHHHHHHHHHHTTCEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESS
T ss_pred CCCeEEEE-------CCCHHHHHHHHHHHhcCCeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCC
Confidence 68888888 6677899999999999999998874321 134566667788888889988754211111
Q ss_pred -----H---hhhccCEEEEechhc
Q 022363 146 -----N---TALKADLIVLNTAVA 161 (298)
Q Consensus 146 -----~---~A~~aDLVIaNT~v~ 161 (298)
. ....+|.||..|-..
T Consensus 258 ~v~~v~~~~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 258 RVEAVETDKGTYKADLVLVSVGVK 281 (480)
T ss_dssp BEEEEEETTEEEECSEEEECSCEE
T ss_pred cEEEEEECCCEEEcCEEEECcCCC
Confidence 1 123689998877653
No 104
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=64.61 E-value=65 Score=27.33 Aligned_cols=40 Identities=15% Similarity=-0.028 Sum_probs=28.0
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
|.++|-+|..+++..--.-++-.+...+++.|+++.+...
T Consensus 1 k~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 40 (313)
T 3m9w_A 1 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA 40 (313)
T ss_dssp --CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECC
Confidence 3466777777776665555667777888888988887764
No 105
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=64.54 E-value=18 Score=30.76 Aligned_cols=59 Identities=15% Similarity=0.205 Sum_probs=43.1
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCceeeh
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVISA 139 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~r-gI~v~~~ 139 (298)
..++|+|++| |+-..-+|+|..|.+.|.+|.++........ ...+.+++.++ ||++...
T Consensus 170 ~~~~~~v~vv-------G~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~---~~~~~~~l~~~~gv~i~~~ 229 (338)
T 3itj_A 170 IFRNKPLAVI-------GGGDSACEEAQFLTKYGSKVFMLVRKDHLRA---STIMQKRAEKNEKIEILYN 229 (338)
T ss_dssp GGTTSEEEEE-------CSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHHHHHHHHCTTEEEECS
T ss_pred hcCCCEEEEE-------CCCHHHHHHHHHHHhcCCEEEEEEcCCccCC---CHHHHHHHHhcCCeEEeec
Confidence 4578999998 4555789999999999999999884432211 23456777776 8888754
No 106
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=64.35 E-value=15 Score=32.91 Aligned_cols=61 Identities=11% Similarity=0.190 Sum_probs=43.1
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe--ccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT--IQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~--~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
.+.+||+||+| .|.=.||+ -+.+.++.|++.|.+++-++ -..+. .+-.+++.+.|+++..-
T Consensus 145 ~~~~Gk~VLIV-DDvitTG~--Tl~~a~~~L~~~Ga~vv~v~~l~d~~~------~~a~e~l~~~gi~~~sL 207 (243)
T 3dez_A 145 RVTKGQKMVII-EDLISTGG--SVLDAVAAAQREGADVLGVVAIFTYEL------PKATANFEKASVKLVTL 207 (243)
T ss_dssp CCCTTCEEEEE-EEEESSSH--HHHHHHHHHHHTTCEEEEEEEEEECCC------HHHHHHHHHHTCCEEES
T ss_pred ccCCCCEEEEE-EeeccccH--HHHHHHHHHHHCCCEEEEEEEEEECCC------chHHHHHHhcCCCEEEE
Confidence 35789999888 56777787 57789999999999865433 22221 13357777889988855
No 107
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=64.32 E-value=8.3 Score=31.73 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=29.6
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~ 108 (298)
+.+||+||+| .|.-.||+ -|.+.++.|++.|..++
T Consensus 117 ~~~gk~VllV-DDvitTG~--Tl~~~~~~L~~~Ga~~v 151 (180)
T 1zn8_A 117 LEPGQRVVVV-DDLLATGG--TMNAACELLGRLQAEVL 151 (180)
T ss_dssp SCTTCEEEEE-EEEESSSH--HHHHHHHHHHHTTCEEE
T ss_pred cCCCCEEEEE-cCCcccHH--HHHHHHHHHHHcCCEEE
Confidence 4789998887 78888999 67789999999998854
No 108
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=64.29 E-value=18 Score=33.52 Aligned_cols=59 Identities=19% Similarity=0.329 Sum_probs=44.3
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+|++++| |+-..-+|+|..|++.|.+|.++...... .+.++...+.+.+.++||++...
T Consensus 183 ~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 244 (478)
T 1v59_A 183 PKRLTII-------GGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLS 244 (478)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECS
T ss_pred CceEEEE-------CCCHHHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeC
Confidence 5778777 44457889999999999999998743321 34556667888888889988754
No 109
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=64.29 E-value=40 Score=29.33 Aligned_cols=81 Identities=14% Similarity=0.147 Sum_probs=48.6
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhC--CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh---h--c----hh
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA---K--G----QE 143 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~--G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~---k--~----~~ 143 (298)
|-++|+|..-+ -|-.|...+++. +++++.+..+.++. +..+...+.|||++.- + . .+
T Consensus 2 ri~vl~Sg~gs------nl~ali~~~~~~~~~~~i~~Vis~~~~~------~~~~~A~~~gIp~~~~~~~~~~~r~~~~~ 69 (212)
T 1jkx_A 2 NIVVLISGNGS------NLQAIIDACKTNKIKGTVRAVFSNKADA------FGLERARQAGIATHTLIASAFDSREAYDR 69 (212)
T ss_dssp EEEEEESSCCH------HHHHHHHHHHTTSSSSEEEEEEESCTTC------HHHHHHHHTTCEEEECCGGGCSSHHHHHH
T ss_pred EEEEEEECCcH------HHHHHHHHHHcCCCCceEEEEEeCCCch------HHHHHHHHcCCcEEEeCcccccchhhccH
Confidence 45677776554 355666666665 57887777665432 3356778889999852 1 1 12
Q ss_pred HH-H--hhhccCEEEEec---hhchHHHHH
Q 022363 144 TI-N--TALKADLIVLNT---AVAGKWLDA 167 (298)
Q Consensus 144 ~i-~--~A~~aDLVIaNT---~v~g~wl~~ 167 (298)
++ + ...++|+|++-. +.....++.
T Consensus 70 ~~~~~l~~~~~Dliv~agy~~il~~~~l~~ 99 (212)
T 1jkx_A 70 ELIHEIDMYAPDVVVLAGFMRILSPAFVSH 99 (212)
T ss_dssp HHHHHHGGGCCSEEEESSCCSCCCHHHHHH
T ss_pred HHHHHHHhcCCCEEEEeChhhhCCHHHHhh
Confidence 22 2 355899999753 334444443
No 110
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=64.20 E-value=8.8 Score=35.68 Aligned_cols=81 Identities=21% Similarity=0.335 Sum_probs=56.0
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhC-CCeEEEEeccCC----CCchhhhhhhHHHHHHcCCceeehhchhHH---
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKP----SEEDEVIYSLEHKMWDRGVQVISAKGQETI--- 145 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~-G~~V~vL~~~~G----~~~g~v~~~L~~kll~rgI~v~~~k~~~~i--- 145 (298)
+|++++| |+-..-+|+|..|.+. |.+|.++..... ....++...+.+.+.++|+++........+
T Consensus 159 ~~~vvVi-------GgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 231 (472)
T 3iwa_A 159 VSKAVIV-------GGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGE 231 (472)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEES
T ss_pred CCEEEEE-------CCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEcc
Confidence 6788887 4445678999999999 999998874332 234566667888888889988754211111
Q ss_pred ------H----hhhccCEEEEechhc
Q 022363 146 ------N----TALKADLIVLNTAVA 161 (298)
Q Consensus 146 ------~----~A~~aDLVIaNT~v~ 161 (298)
. ....+|.||..|-..
T Consensus 232 ~~~v~v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 232 NGKVARVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp SSBEEEEEESSCEEECSEEEECSCEE
T ss_pred CCeEEEEEeCCCEEEcCEEEECCCCC
Confidence 1 124689999877654
No 111
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=64.01 E-value=47 Score=27.61 Aligned_cols=41 Identities=15% Similarity=0.109 Sum_probs=28.4
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
++++|-+|..+++..--.-++-.+-+.+++.|+++.+....
T Consensus 6 ~s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~ 46 (276)
T 3jy6_A 6 SSKLIAVIVANIDDYFSTELFKGISSILESRGYIGVLFDAN 46 (276)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CCcEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45678888777654434445666778888889998887644
No 112
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=63.83 E-value=49 Score=27.53 Aligned_cols=41 Identities=5% Similarity=-0.101 Sum_probs=28.9
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
++++|-+|..+.+..--.-++-.+...+++.|+++.+....
T Consensus 4 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 44 (291)
T 3l49_A 4 EGKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAG 44 (291)
T ss_dssp TTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 56788888887653322335566778899999999888643
No 113
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=63.72 E-value=18 Score=32.49 Aligned_cols=64 Identities=19% Similarity=0.251 Sum_probs=40.7
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe--ccCCCCchhhhhhhHHHH-HHcCCceeeh
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT--IQKPSEEDEVIYSLEHKM-WDRGVQVISA 139 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~--~~~G~~~g~v~~~L~~kl-l~rgI~v~~~ 139 (298)
+.+| +||+| .|.=.||+ -+.+.++.|++.|.+|+-+. -.+++.+.+.... .+++ .+.|+++..-
T Consensus 140 ~~~G-~VliV-DDvitTG~--T~~~a~~~l~~~Ga~vv~v~vlvdr~egG~~~l~a-~~~~~~~~Gv~v~SL 206 (238)
T 3n2l_A 140 KLEG-RVMLV-DDVITAGT--AIRESMELIQANKADLAGVLVAIDRQEKGKGELSA-IQEVERDFGCAVISI 206 (238)
T ss_dssp CCCS-EEEEE-CSCCSSSH--HHHHHHHHHHHTTCEEEEEEEEEECCCBCSSSSBH-HHHHHHHHCCEEEEE
T ss_pred ccCC-cEEEE-eeeecccH--HHHHHHHHHHHcCCEEEEEEEEEEcccCccchhhH-HHHHHHHcCCCEEEE
Confidence 5689 87766 67778888 57888999999999865322 2222111111122 3455 6779998854
No 114
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=63.65 E-value=22 Score=31.93 Aligned_cols=81 Identities=17% Similarity=0.196 Sum_probs=55.8
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhHH----
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQETI---- 145 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~g~v~~~L~~kll~rgI~v~~~k~~~~i---- 145 (298)
+|++++| |+-..-+|+|..|.+.|.+|.++...... ...++...+.+.+.++|+.+........+
T Consensus 145 ~~~v~Vi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~ 217 (384)
T 2v3a_A 145 KRRVLLL-------GAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG 217 (384)
T ss_dssp CCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEET
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC
Confidence 7888887 55567789999999999999988744321 13455667788888889988754211111
Q ss_pred -----H----hhhccCEEEEechhc
Q 022363 146 -----N----TALKADLIVLNTAVA 161 (298)
Q Consensus 146 -----~----~A~~aDLVIaNT~v~ 161 (298)
. ....+|.||..|-..
T Consensus 218 ~~~~v~~~~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 218 EGLEAHLSDGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp TEEEEEETTSCEEEESEEEECSCEE
T ss_pred CEEEEEECCCCEEECCEEEECcCCC
Confidence 1 123689999887654
No 115
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=63.40 E-value=14 Score=30.76 Aligned_cols=76 Identities=13% Similarity=0.149 Sum_probs=50.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHH-----
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN----- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~----- 146 (298)
.++|+|++| |+-..-+|+|..|.+.| +|.++..... .+...+.+.+.++||++... ..+++.
T Consensus 139 ~~~~~v~vv-------G~G~~~~e~a~~l~~~g-~v~~v~~~~~----~~~~~~~~~l~~~gv~i~~~-~v~~i~~~~~v 205 (297)
T 3fbs_A 139 LDQGKIGVI-------AASPMAIHHALMLPDWG-ETTFFTNGIV----EPDADQHALLAARGVRVETT-RIREIAGHADV 205 (297)
T ss_dssp GTTCEEEEE-------CCSTTHHHHHHHGGGTS-EEEEECTTTC----CCCHHHHHHHHHTTCEEECS-CEEEEETTEEE
T ss_pred hcCCEEEEE-------ecCccHHHHHHHhhhcC-cEEEEECCCC----CCCHHHHHHHHHCCcEEEcc-eeeeeecCCeE
Confidence 468999998 34446789999999999 9988874433 23345678888889988752 111111
Q ss_pred -----hhhccCEEEEechh
Q 022363 147 -----TALKADLIVLNTAV 160 (298)
Q Consensus 147 -----~A~~aDLVIaNT~v 160 (298)
....+|+||..|-.
T Consensus 206 ~~~~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 206 VLADGRSIALAGLFTQPKL 224 (297)
T ss_dssp EETTSCEEEESEEEECCEE
T ss_pred EeCCCCEEEEEEEEEccCc
Confidence 12357888877654
No 116
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=63.25 E-value=8.3 Score=31.42 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=29.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~ 108 (298)
.+||+||+| .|.-.||+ -|.+.++.|++.|...+
T Consensus 118 v~gk~VllV-DDvitTG~--Tl~~~~~~L~~~Ga~~V 151 (175)
T 1vch_A 118 LLNQRVVLV-SDVVASGE--TMRAMEKMVLRAGGHVV 151 (175)
T ss_dssp HTTCEEEEE-EEEESSSH--HHHHHHHHHHHTTCEEE
T ss_pred cCCCEEEEE-eccccchH--HHHHHHHHHHHcCCeEE
Confidence 589999888 78888999 67789999999998854
No 117
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=63.25 E-value=32 Score=29.88 Aligned_cols=64 Identities=14% Similarity=0.144 Sum_probs=41.3
Q ss_pred CchHHHHHHHHHHHhCCC--eEEEEeccCCCCchhhhhhhHHHHHHcCCceee--hhc-------hhHH-H--hhhccCE
Q 022363 88 GGPLLLMELAFLLRGVGT--KVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--AKG-------QETI-N--TALKADL 153 (298)
Q Consensus 88 GAPLlLleLA~~Lkq~G~--~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~--~k~-------~~~i-~--~A~~aDL 153 (298)
|.+-.+..+...|.+.++ +++.+..+.++. ...+...+.|||++. .+. .+++ + ...++|+
T Consensus 10 G~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~------~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~Dl 83 (216)
T 2ywr_A 10 GRGSNLQAIIDAIESGKVNASIELVISDNPKA------YAIERCKKHNVECKVIQRKEFPSKKEFEERMALELKKKGVEL 83 (216)
T ss_dssp SCCHHHHHHHHHHHTTSSCEEEEEEEESCTTC------HHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCE
T ss_pred CCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCh------HHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHhcCCCE
Confidence 445578888888888777 776666554321 346777888999983 211 1222 2 2458999
Q ss_pred EEEe
Q 022363 154 IVLN 157 (298)
Q Consensus 154 VIaN 157 (298)
|++-
T Consensus 84 iv~a 87 (216)
T 2ywr_A 84 VVLA 87 (216)
T ss_dssp EEES
T ss_pred EEEe
Confidence 9864
No 118
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=63.18 E-value=20 Score=33.46 Aligned_cols=59 Identities=24% Similarity=0.371 Sum_probs=43.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+|+|++| |+-..-+|+|..|++.|.+|.++..... ....++...+.+.+.++||++...
T Consensus 169 ~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~ 230 (464)
T 2eq6_A 169 PKRLLVI-------GGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTK 230 (464)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCEEEEE-------CCCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcC
Confidence 5788887 4445678999999999999999874321 134556667788888889988754
No 119
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=63.06 E-value=20 Score=33.27 Aligned_cols=59 Identities=12% Similarity=0.235 Sum_probs=44.1
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC----CCchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP----SEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G----~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+|+|++| |+=..-+|+|..|++.|.+|.++..... ..+.++...+.+.+.++||++...
T Consensus 178 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~ 240 (474)
T 1zmd_A 178 PEKMVVI-------GAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLN 240 (474)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECS
T ss_pred CceEEEE-------CCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeC
Confidence 5778887 4445678999999999999999874432 234556667888888889988754
No 120
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=62.85 E-value=15 Score=32.16 Aligned_cols=61 Identities=16% Similarity=0.141 Sum_probs=44.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC-CchhhhhhhHHHHHHcCCceeeh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS-EEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~-~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
.++|+|++| |+-..-+|+|..|++.|.+|.++...... ..++....|.+.+.++||++...
T Consensus 161 ~~~~~vvVv-------G~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~ 222 (360)
T 3ab1_A 161 FKGKRVVIV-------GGGDSALDWTVGLIKNAASVTLVHRGHEFQGHGKTAHEVERARANGTIDVYLE 222 (360)
T ss_dssp GTTCEEEEE-------CSSHHHHHHHHHTTTTSSEEEEECSSSSCSSCSHHHHSSHHHHHHTSEEEESS
T ss_pred cCCCcEEEE-------CCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCCHHHHHHHHHHhhcCceEEEcC
Confidence 367888887 55567889999999999999998744321 22345556777777778887754
No 121
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=62.76 E-value=7.9 Score=28.99 Aligned_cols=72 Identities=11% Similarity=0.167 Sum_probs=42.0
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee-h-hchhHHHh--h
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-A-KGQETINT--A 148 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~-~-k~~~~i~~--A 148 (298)
++|+|++++ ++..| ..+++.|.+.|++|.++... + .. .+++.+.|..++. + ...+.+.. .
T Consensus 5 ~~~~v~I~G--~G~iG-----~~~a~~l~~~g~~v~~~d~~-~---~~-----~~~~~~~~~~~~~~d~~~~~~l~~~~~ 68 (144)
T 2hmt_A 5 KNKQFAVIG--LGRFG-----GSIVKELHRMGHEVLAVDIN-E---EK-----VNAYASYATHAVIANATEENELLSLGI 68 (144)
T ss_dssp -CCSEEEEC--CSHHH-----HHHHHHHHHTTCCCEEEESC-H---HH-----HHTTTTTCSEEEECCTTCHHHHHTTTG
T ss_pred cCCcEEEEC--CCHHH-----HHHHHHHHHCCCEEEEEeCC-H---HH-----HHHHHHhCCEEEEeCCCCHHHHHhcCC
Confidence 467788886 23334 45678889999998776532 1 11 1233444665542 2 22233432 4
Q ss_pred hccCEEEEechh
Q 022363 149 LKADLIVLNTAV 160 (298)
Q Consensus 149 ~~aDLVIaNT~v 160 (298)
.++|.||.+|-.
T Consensus 69 ~~~d~vi~~~~~ 80 (144)
T 2hmt_A 69 RNFEYVIVAIGA 80 (144)
T ss_dssp GGCSEEEECCCS
T ss_pred CCCCEEEECCCC
Confidence 689999988764
No 122
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=62.73 E-value=20 Score=33.88 Aligned_cols=81 Identities=17% Similarity=0.251 Sum_probs=55.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchh-------
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQE------- 143 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~g~v~~~L~~kll~rgI~v~~~k~~~------- 143 (298)
+|++++| |+-..-+|+|..|.+.|.+|.++..... ..+.++...+.+.+.++||++.......
T Consensus 176 ~~~vvVi-------GgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~ 248 (500)
T 1onf_A 176 SKKIGIV-------GSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSD 248 (500)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHTTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESST
T ss_pred CCeEEEE-------CChHHHHHHHHHHHHcCCeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCC
Confidence 5778877 4555789999999999999999974322 1345666677888888999887542111
Q ss_pred ---HHH----hh-hccCEEEEechhc
Q 022363 144 ---TIN----TA-LKADLIVLNTAVA 161 (298)
Q Consensus 144 ---~i~----~A-~~aDLVIaNT~v~ 161 (298)
.+. .. ..+|+||.-|-..
T Consensus 249 ~~~~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 249 KNLSIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp TCEEEEETTSCEEEEESEEEECCCBC
T ss_pred ceEEEEECCCcEEEECCEEEECCCCC
Confidence 111 11 4689999876543
No 123
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=62.70 E-value=20 Score=33.25 Aligned_cols=59 Identities=22% Similarity=0.456 Sum_probs=44.2
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+|++++| |+-..-+|+|..|.+.|.+|.++...... .+.++...+.+.+.++||++...
T Consensus 171 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 232 (464)
T 2a8x_A 171 PKSIIIA-------GAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTA 232 (464)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECS
T ss_pred CCeEEEE-------CCcHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeC
Confidence 5777777 45567889999999999999998744321 34556666788888889988754
No 124
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=62.53 E-value=29 Score=30.68 Aligned_cols=64 Identities=16% Similarity=0.149 Sum_probs=41.4
Q ss_pred CchHHHHHHHHHHHhC--CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee--h-h--c----hhHH-H--hhhccCE
Q 022363 88 GGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--A-K--G----QETI-N--TALKADL 153 (298)
Q Consensus 88 GAPLlLleLA~~Lkq~--G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~--~-k--~----~~~i-~--~A~~aDL 153 (298)
|.|-.+..+.+.|.+. +++++.+..++++. +..+...+.|||++. . + . .+++ + ...++|+
T Consensus 31 G~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~------~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~Dl 104 (229)
T 3auf_A 31 GSGTNLQAILDGCREGRIPGRVAVVISDRADA------YGLERARRAGVDALHMDPAAYPSRTAFDAALAERLQAYGVDL 104 (229)
T ss_dssp SCCHHHHHHHHHHHTTSSSEEEEEEEESSTTC------HHHHHHHHTTCEEEECCGGGSSSHHHHHHHHHHHHHHTTCSE
T ss_pred CCcHHHHHHHHHHHhCCCCCeEEEEEcCCCch------HHHHHHHHcCCCEEEECcccccchhhccHHHHHHHHhcCCCE
Confidence 4455788888888876 57887777664421 345677888999973 2 1 1 1222 2 2558999
Q ss_pred EEEe
Q 022363 154 IVLN 157 (298)
Q Consensus 154 VIaN 157 (298)
||+-
T Consensus 105 iv~a 108 (229)
T 3auf_A 105 VCLA 108 (229)
T ss_dssp EEES
T ss_pred EEEc
Confidence 9874
No 125
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=62.40 E-value=12 Score=32.99 Aligned_cols=36 Identities=25% Similarity=0.235 Sum_probs=28.3
Q ss_pred EEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 76 kILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
+||+++. ...|-=.-++.|++.|++.|++|.+++..
T Consensus 2 rIl~~~~--~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~ 37 (384)
T 2p6p_A 2 RILFVAA--GSPATVFALAPLATAARNAGHQVVMAANQ 37 (384)
T ss_dssp EEEEECC--SSHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred EEEEEeC--CccchHhHHHHHHHHHHHCCCEEEEEeCH
Confidence 6888865 22366567889999999999999999843
No 126
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=62.36 E-value=19 Score=30.26 Aligned_cols=58 Identities=22% Similarity=0.282 Sum_probs=39.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHH-HHcCCceeeh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKM-WDRGVQVISA 139 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kl-l~rgI~v~~~ 139 (298)
.++|++++| |+-..-+|+|..|++.|.+|.++........++ .+.+++ .++|+++...
T Consensus 145 ~~~~~v~vi-------G~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~~~---~~~~~~~~~~gv~~~~~ 203 (315)
T 3r9u_A 145 YKNKEVAVL-------GGGDTALEEALYLANICSKIYLIHRRDEFRAAP---STVEKVKKNEKIELITS 203 (315)
T ss_dssp GTTSEEEEE-------CCBHHHHHHHHHHHTTSSEEEEECSSSSCBSCH---HHHHHHHHCTTEEEECS
T ss_pred cCcCEEEEE-------CCCHHHHHHHHHHHhhCCEEEEEEeCCCCCCCH---HHHHHHHhcCCeEEEeC
Confidence 468899998 555678999999999999999887443321111 223444 4568888754
No 127
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=62.27 E-value=20 Score=33.46 Aligned_cols=80 Identities=21% Similarity=0.270 Sum_probs=55.2
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchh-------
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQE------- 143 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~g~v~~~L~~kll~rgI~v~~~k~~~------- 143 (298)
+|+|++| |+-..-+|+|..|++.|.+|.++..... ..+.++...+.+.+.++|+++.......
T Consensus 166 ~~~vvVv-------GgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~ 238 (463)
T 2r9z_A 166 PKRVAII-------GAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQ 238 (463)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETT
T ss_pred CCEEEEE-------CCCHHHHHHHHHHHhcCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC
Confidence 5778887 5666889999999999999999885432 1334566677888888899887542111
Q ss_pred --HHH----h-hhccCEEEEechh
Q 022363 144 --TIN----T-ALKADLIVLNTAV 160 (298)
Q Consensus 144 --~i~----~-A~~aDLVIaNT~v 160 (298)
.+. . ...+|+||..|-.
T Consensus 239 ~~~v~~~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 239 GTTLVAQDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp EEEEEETTCCEEEEESEEEECSCE
T ss_pred eEEEEEeCCcEEEEcCEEEECCCC
Confidence 111 1 2468999887654
No 128
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=62.09 E-value=12 Score=29.60 Aligned_cols=74 Identities=14% Similarity=0.126 Sum_probs=43.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-hh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TA 148 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~-~A 148 (298)
|.+|+||++ +-||. +=-++++.|.+.|++|.++..+... +. +....++.++.. ....++. ..
T Consensus 1 M~~~~ilVt----GatG~--iG~~l~~~l~~~g~~V~~~~r~~~~--------~~-~~~~~~~~~~~~D~~~~~~~~~~~ 65 (206)
T 1hdo_A 1 MAVKKIAIF----GATGQ--TGLTTLAQAVQAGYEVTVLVRDSSR--------LP-SEGPRPAHVVVGDVLQAADVDKTV 65 (206)
T ss_dssp CCCCEEEEE----STTSH--HHHHHHHHHHHTTCEEEEEESCGGG--------SC-SSSCCCSEEEESCTTSHHHHHHHH
T ss_pred CCCCEEEEE----cCCcH--HHHHHHHHHHHCCCeEEEEEeChhh--------cc-cccCCceEEEEecCCCHHHHHHHH
Confidence 445677664 23333 5678889999999999988743221 00 111234544422 2334443 45
Q ss_pred hccCEEEEechh
Q 022363 149 LKADLIVLNTAV 160 (298)
Q Consensus 149 ~~aDLVIaNT~v 160 (298)
.++|.||.|...
T Consensus 66 ~~~d~vi~~a~~ 77 (206)
T 1hdo_A 66 AGQDAVIVLLGT 77 (206)
T ss_dssp TTCSEEEECCCC
T ss_pred cCCCEEEECccC
Confidence 689999988764
No 129
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=62.08 E-value=12 Score=37.23 Aligned_cols=85 Identities=19% Similarity=0.209 Sum_probs=55.2
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCc----hhhhhhhHHHHHHcCCceeehhchhHHH
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE----DEVIYSLEHKMWDRGVQVISAKGQETIN 146 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~----g~v~~~L~~kll~rgI~v~~~k~~~~i~ 146 (298)
.-+||+|++|. .|+-..-+|+|..|.+.|.+|.++........ ......+.+.+.++|+++........+.
T Consensus 520 ~~~g~~VvViG-----~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~ 594 (690)
T 3k30_A 520 LPDGKKVVVYD-----DDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVG 594 (690)
T ss_dssp CCSSSEEEEEE-----CSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEE
T ss_pred CCCCCEEEEEc-----CCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEE
Confidence 34678899985 23444568999999999999999984432111 2223456788888899988653222221
Q ss_pred --------------hhhccCEEEEechh
Q 022363 147 --------------TALKADLIVLNTAV 160 (298)
Q Consensus 147 --------------~A~~aDLVIaNT~v 160 (298)
....+|.||..|-.
T Consensus 595 ~~~~~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 595 AGGVTVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp TTEEEEEETTTCCEEEEECSEEEEESCE
T ss_pred CCeEEEEEccCCeEEEEECCEEEECCCC
Confidence 12358888877654
No 130
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=62.08 E-value=20 Score=33.26 Aligned_cols=80 Identities=19% Similarity=0.230 Sum_probs=54.8
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchh-------
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQE------- 143 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~g~v~~~L~~kll~rgI~v~~~k~~~------- 143 (298)
+|++++| |+-..-+|+|..|.+.|.+|.++..... ..+.++...+.+.+.++|+++.......
T Consensus 167 ~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~ 239 (450)
T 1ges_A 167 PERVAVV-------GAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTD 239 (450)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTT
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHhcCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC
Confidence 5788888 5556789999999999999999874322 1344566677888888899887542111
Q ss_pred ---HHHh----hhccCEEEEechh
Q 022363 144 ---TINT----ALKADLIVLNTAV 160 (298)
Q Consensus 144 ---~i~~----A~~aDLVIaNT~v 160 (298)
.+.. ...+|+||..|-.
T Consensus 240 ~~~~v~~~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 240 GSLTLELEDGRSETVDCLIWAIGR 263 (450)
T ss_dssp SCEEEEETTSCEEEESEEEECSCE
T ss_pred cEEEEEECCCcEEEcCEEEECCCC
Confidence 1111 2368999887654
No 131
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=62.03 E-value=12 Score=30.85 Aligned_cols=92 Identities=10% Similarity=-0.043 Sum_probs=51.1
Q ss_pred cccEEEEE-eccCCCCCchHHHHHHHHHHHhCCCe---EEEEe-ccCCC-CchhhhhhhHHHHHHcCCceeehhchhHHH
Q 022363 73 KSKLVLLV-SHELSLSGGPLLLMELAFLLRGVGTK---VNWIT-IQKPS-EEDEVIYSLEHKMWDRGVQVISAKGQETIN 146 (298)
Q Consensus 73 ~~KkILLI-SHELS~TGAPLlLleLA~~Lkq~G~~---V~vL~-~~~G~-~~g~v~~~L~~kll~rgI~v~~~k~~~~i~ 146 (298)
+.++|||| +++--|+ |+.=-=+-.++.+.|.. +.+-+ +-.+. .+..+-+.-.+-+.++||..- . .-+++.
T Consensus 6 ~~~~VLFVCtgN~cRS--pmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~~~Gid~s-~-~ar~l~ 81 (161)
T 1d1q_A 6 PKISVAFIALGNFCRS--PMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKIN-H-KGKQIK 81 (161)
T ss_dssp CCEEEEEEESSSSSHH--HHHHHHHHHHHHHTTCGGGEEEEEEEESSCTTBTCCCCHHHHHHHHHTTCCCC-C-CBCBCC
T ss_pred CCCEEEEEcCCcHHHH--HHHHHHHHHHHHHcCCCCCeEEEEeccccCCcCCCCCCHHHHHHHHHcCcCCC-c-eEeECC
Confidence 44689999 4555444 44433334555666754 65555 33221 122333444567777799885 2 223332
Q ss_pred --hhhccCEEEEechhchHHHHHH
Q 022363 147 --TALKADLIVLNTAVAGKWLDAV 168 (298)
Q Consensus 147 --~A~~aDLVIaNT~v~g~wl~~l 168 (298)
....||+||+=+--..+.|.+.
T Consensus 82 ~~~~~~~DlIl~M~~~~~~~l~~~ 105 (161)
T 1d1q_A 82 TKHFDEYDYIIGMDESNINNLKKI 105 (161)
T ss_dssp GGGGGTCSEEEESSHHHHHHHHHH
T ss_pred HHHHhhCCEEEEeCHHHHHHHHHH
Confidence 3568999998665545555443
No 132
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=61.75 E-value=41 Score=27.56 Aligned_cols=41 Identities=10% Similarity=0.047 Sum_probs=28.9
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
++++|-+|..+.+..--.-++-.+-+.+++.|+++.+....
T Consensus 1 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 41 (272)
T 3o74_A 1 HTRTLGFILPDLENPSYARIAKQLEQGARARGYQLLIASSD 41 (272)
T ss_dssp CCCEEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CceEEEEEeCCCcChhHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46778888877654433445566668888899998887644
No 133
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=61.47 E-value=12 Score=33.74 Aligned_cols=40 Identities=10% Similarity=0.101 Sum_probs=31.3
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
|.-++|++++.- ..|-=.-++.||+.|++.|++|.+++..
T Consensus 10 m~~~~Il~~~~~--~~GHv~p~l~la~~L~~~Gh~V~~~~~~ 49 (424)
T 2iya_A 10 VTPRHISFFNIP--GHGHVNPSLGIVQELVARGHRVSYAITD 49 (424)
T ss_dssp -CCCEEEEECCS--CHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred cccceEEEEeCC--CCcccchHHHHHHHHHHCCCeEEEEeCH
Confidence 444689998653 3377778899999999999999999843
No 134
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=61.25 E-value=35 Score=28.09 Aligned_cols=80 Identities=18% Similarity=0.265 Sum_probs=42.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
+++|+||+.. -+| -+=.++++.|.+.|++|.++..+..+ .. ..+.+++.+.+.++. +-....+++
T Consensus 3 l~~~~vlItG----asg--giG~~~a~~l~~~G~~V~~~~~r~~~---~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 72 (247)
T 2hq1_A 3 LKGKTAIVTG----SSR--GLGKAIAWKLGNMGANIVLNGSPAST---SL-DATAEEFKAAGINVVVAKGDVKNPEDVEN 72 (247)
T ss_dssp TTTCEEEESS----CSS--HHHHHHHHHHHHTTCEEEEEECTTCS---HH-HHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred CCCcEEEEEC----CCc--hHHHHHHHHHHHCCCEEEEEcCcCHH---HH-HHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 4577665532 222 25568899999999999888544332 11 123344444443332 112222332
Q ss_pred -------hhhccCEEEEechhc
Q 022363 147 -------TALKADLIVLNTAVA 161 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v~ 161 (298)
....+|.||.|..+.
T Consensus 73 ~~~~~~~~~~~~d~vi~~Ag~~ 94 (247)
T 2hq1_A 73 MVKTAMDAFGRIDILVNNAGIT 94 (247)
T ss_dssp HHHHHHHHHSCCCEEEECC---
T ss_pred HHHHHHHhcCCCCEEEECCCCC
Confidence 123799999998654
No 135
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=61.18 E-value=53 Score=29.44 Aligned_cols=84 Identities=17% Similarity=0.084 Sum_probs=54.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHh-CCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhch----hHHHh
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQ----ETINT 147 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq-~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~----~~i~~ 147 (298)
+|+.|.+++. +.+|---++..||..++. .|..|.++...-. .......|.......|+++...... ..+..
T Consensus 104 ~g~vi~lvG~--~GsGKTTl~~~LA~~l~~~~G~~V~lv~~D~~--r~~a~eqL~~~~~~~gl~~~~~~~~~~l~~al~~ 179 (296)
T 2px0_A 104 HSKYIVLFGS--TGAGKTTTLAKLAAISMLEKHKKIAFITTDTY--RIAAVEQLKTYAELLQAPLEVCYTKEEFQQAKEL 179 (296)
T ss_dssp CSSEEEEEES--TTSSHHHHHHHHHHHHHHTTCCCEEEEECCCS--STTHHHHHHHHHTTTTCCCCBCSSHHHHHHHHHH
T ss_pred CCcEEEEECC--CCCCHHHHHHHHHHHHHHhcCCEEEEEecCcc--cchHHHHHHHHHHhcCCCeEecCCHHHHHHHHHH
Confidence 5788889987 689999999999999985 8999988874321 1111111222222236766543221 22334
Q ss_pred hhccCEEEEechh
Q 022363 148 ALKADLIVLNTAV 160 (298)
Q Consensus 148 A~~aDLVIaNT~v 160 (298)
+.++|+||+-|.-
T Consensus 180 ~~~~dlvIiDT~G 192 (296)
T 2px0_A 180 FSEYDHVFVDTAG 192 (296)
T ss_dssp GGGSSEEEEECCC
T ss_pred hcCCCEEEEeCCC
Confidence 6799999999873
No 136
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=61.04 E-value=9.6 Score=30.28 Aligned_cols=35 Identities=26% Similarity=0.273 Sum_probs=28.9
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~ 108 (298)
..+||+||+| .|.-.||+ -|.+.++.|++.|...+
T Consensus 80 ~~~gk~VllV-DDvitTG~--Tl~~a~~~L~~~ga~~v 114 (153)
T 1vdm_A 80 DLKDKRVVIV-DDVSDTGK--TLEVVIEEVKKLGAKEI 114 (153)
T ss_dssp CCBTCEEEEE-EEEESSCH--HHHHHHHHHHTTTBSEE
T ss_pred CCCCCEEEEE-ecccCChH--HHHHHHHHHHHcCCCEE
Confidence 4689998887 78888998 67789999999998744
No 137
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=60.92 E-value=11 Score=31.54 Aligned_cols=32 Identities=28% Similarity=0.366 Sum_probs=28.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCe
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTK 106 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~ 106 (298)
.+||+||+| .|.-.||+ -|.+.++.|++.|..
T Consensus 115 ~~gk~VLLV-DDVitTG~--Tl~aa~~~L~~~Ga~ 146 (186)
T 1l1q_A 115 GPHDVVLLH-DDVLATGG--TLLAAIELCETAGVK 146 (186)
T ss_dssp CTTCCEEEE-EEEESSSH--HHHHHHHHHHHTTCC
T ss_pred CCcCEEEEE-ecccccHH--HHHHHHHHHHHcCCC
Confidence 589999887 78888999 677899999999988
No 138
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=60.88 E-value=20 Score=29.71 Aligned_cols=94 Identities=15% Similarity=0.058 Sum_probs=52.1
Q ss_pred ccccEEEEEe-ccCCCCCchHHHHHHHHHHHhCCCe--EEEEe-ccCCC-CchhhhhhhHHHHHHcCCceeehhchhHHH
Q 022363 72 MKSKLVLLVS-HELSLSGGPLLLMELAFLLRGVGTK--VNWIT-IQKPS-EEDEVIYSLEHKMWDRGVQVISAKGQETIN 146 (298)
Q Consensus 72 ~~~KkILLIS-HELS~TGAPLlLleLA~~Lkq~G~~--V~vL~-~~~G~-~~g~v~~~L~~kll~rgI~v~~~k~~~~i~ 146 (298)
|+.++||||. ++--| .|+.=-=+-.++.+.|.. +.+-+ +-.+. .+..+-+.-.+-+.++||+. ..+. +++.
T Consensus 3 ~~~~~vLFVC~gN~cR--SpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~-~~~a-r~l~ 78 (157)
T 3n8i_A 3 QATKSVLFVCLGNICR--SPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPM-SHVA-RQIT 78 (157)
T ss_dssp -CCEEEEEEESSSSSH--HHHHHHHHHHHHHHTTCGGGEEEEEEESSSTTTTCCCCHHHHHHHHHTTCCC-CCCC-CBCC
T ss_pred CCCCEEEEECCCchhH--HHHHHHHHHHHHHHcCCCCcEEEEeeecCccccCCCCCHHHHHHHHHcCcCC-CCce-eECC
Confidence 4567899995 44444 354433334556666753 55555 32221 11233334556777789997 4322 2232
Q ss_pred --hhhccCEEEEechhchHHHHHHh
Q 022363 147 --TALKADLIVLNTAVAGKWLDAVL 169 (298)
Q Consensus 147 --~A~~aDLVIaNT~v~g~wl~~l~ 169 (298)
....||+||+=+--....+.+..
T Consensus 79 ~~~~~~~DlIi~M~~~n~~~l~~~~ 103 (157)
T 3n8i_A 79 KEDFATFDYILCMDESNLRDLNRKS 103 (157)
T ss_dssp HHHHHHCSEEEESSHHHHHHHHHHH
T ss_pred HHHcCCCCEEEEeCcHHHHHHHHHC
Confidence 46789999987665555555543
No 139
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=60.82 E-value=70 Score=27.17 Aligned_cols=90 Identities=10% Similarity=-0.022 Sum_probs=52.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhccC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~aD 152 (298)
++++|-+|..+++..=-.-++-.+-..+++.|+++.+...... .+- +.+. .+.+ ...++|
T Consensus 2 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~---~~~----~~~~------------i~~~-~~~~vd 61 (330)
T 3uug_A 2 DKGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDD---IPN----QLSQ------------IENM-VTKGVK 61 (330)
T ss_dssp CCCEEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEEEEECTTC---HHH----HHHH------------HHHH-HHHTCS
T ss_pred CCcEEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEEEeeCCCC---HHH----HHHH------------HHHH-HHcCCC
Confidence 5678888888776553334555566788888998887763321 111 0011 1111 246789
Q ss_pred EEEEechh---chHHHHHHhhccCCCCCCceEEEeeec
Q 022363 153 LIVLNTAV---AGKWLDAVLKEDVPRVLPNVLWWIHEM 187 (298)
Q Consensus 153 LVIaNT~v---~g~wl~~l~~~~~p~~~~pVIWWIHE~ 187 (298)
.||+...- ....++.+.+.++ |||..=.+.
T Consensus 62 giIi~~~~~~~~~~~~~~~~~~gi-----PvV~~~~~~ 94 (330)
T 3uug_A 62 VLVIASIDGTTLSDVLKQAGEQGI-----KVIAYDRLI 94 (330)
T ss_dssp EEEECCSSGGGGHHHHHHHHHTTC-----EEEEESSCC
T ss_pred EEEEEcCCchhHHHHHHHHHHCCC-----CEEEECCCC
Confidence 88887654 3445676665565 666654433
No 140
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=60.62 E-value=62 Score=29.08 Aligned_cols=85 Identities=20% Similarity=0.267 Sum_probs=54.9
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc--------hhH
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--------QET 144 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~--------~~~ 144 (298)
+++.|.+++ .+.+|---++..||..+.+.|..|.++...-. .......|.....+.|++++.... .+.
T Consensus 97 ~~~vi~i~G--~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~--r~~a~~ql~~~~~~~~v~v~~~~~~~~p~~~~~~~ 172 (297)
T 1j8m_F 97 IPYVIMLVG--VQGTGKTTTAGKLAYFYKKKGFKVGLVGADVY--RPAALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRG 172 (297)
T ss_dssp SSEEEEEEC--SSCSSTTHHHHHHHHHHHHTTCCEEEEECCCS--SSHHHHHHHHHHHHHTCCEECCTTCCCHHHHHHHH
T ss_pred CCeEEEEEC--CCCCCHHHHHHHHHHHHHHCCCeEEEEecCCC--CHHHHHHHHHHhccCCeEEEecCCCCCHHHHHHHH
Confidence 356666665 48889999999999999999999988874321 111111222223345888876421 123
Q ss_pred HHhh--hccCEEEEechhc
Q 022363 145 INTA--LKADLIVLNTAVA 161 (298)
Q Consensus 145 i~~A--~~aDLVIaNT~v~ 161 (298)
+..+ .++|+||.-|.-.
T Consensus 173 l~~~~~~~~D~ViIDTpg~ 191 (297)
T 1j8m_F 173 VEKFLSEKMEIIIVDTAGR 191 (297)
T ss_dssp HHHHHHTTCSEEEEECCCS
T ss_pred HHHHHhCCCCEEEEeCCCC
Confidence 3333 6899999999743
No 141
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=60.44 E-value=56 Score=32.09 Aligned_cols=86 Identities=15% Similarity=0.176 Sum_probs=56.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh-c-------hhH
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK-G-------QET 144 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k-~-------~~~ 144 (298)
+.+.|+++++ ..+|=--+...||.+|++.|..|.++...-- ..-.+..|...-.+.|++++... . .+.
T Consensus 100 ~~~vI~ivG~--~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~--r~aa~~qL~~~~~~~~i~v~~~~~~~dp~~i~~~a 175 (504)
T 2j37_W 100 KQNVIMFVGL--QGSGKTTTCSKLAYYYQRKGWKTCLICADTF--RAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEG 175 (504)
T ss_dssp --EEEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEEECCS--SSHHHHHHHHHHHHHTCCEEECCCCSCHHHHHHHH
T ss_pred CCeEEEEECC--CCCCHHHHHHHHHHHHHhCCCeEEEEecccc--chhHHHHHHHHhhccCceEEccCCCCCHHHHHHHH
Confidence 3567888888 6889999999999999999999999985321 11111223333344588877631 1 123
Q ss_pred HHhh--hccCEEEEechhch
Q 022363 145 INTA--LKADLIVLNTAVAG 162 (298)
Q Consensus 145 i~~A--~~aDLVIaNT~v~g 162 (298)
+..+ .++|+||+-|+-..
T Consensus 176 l~~~~~~~~DvvIIDTpG~~ 195 (504)
T 2j37_W 176 VEKFKNENFEIIIVDTSGRH 195 (504)
T ss_dssp HHHHHHTTCCEEEEEECCCC
T ss_pred HHHHHHCCCcEEEEeCCCCc
Confidence 3333 68999999998543
No 142
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=60.40 E-value=24 Score=32.57 Aligned_cols=81 Identities=15% Similarity=0.128 Sum_probs=56.7
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhHHH--
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQETIN-- 146 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~g~v~~~L~~kll~rgI~v~~~k~~~~i~-- 146 (298)
.+|++++| |+-..-+|+|..|.+.|.+|.++...... .+.++...+.+.+.++|+.+.....-.++.
T Consensus 146 ~~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 218 (452)
T 3oc4_A 146 NSQTVAVI-------GAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEET 218 (452)
T ss_dssp TCSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEEC
T ss_pred cCCEEEEE-------CCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEcc
Confidence 46788887 55567889999999999999998844321 346666778888888899888642222221
Q ss_pred -------h---hhccCEEEEechh
Q 022363 147 -------T---ALKADLIVLNTAV 160 (298)
Q Consensus 147 -------~---A~~aDLVIaNT~v 160 (298)
+ ...+|.||.-|-.
T Consensus 219 ~~~v~v~~~~g~i~aD~Vv~A~G~ 242 (452)
T 3oc4_A 219 ANGIVLETSEQEISCDSGIFALNL 242 (452)
T ss_dssp SSCEEEEESSCEEEESEEEECSCC
T ss_pred CCeEEEEECCCEEEeCEEEECcCC
Confidence 0 2367888887654
No 143
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=60.17 E-value=47 Score=31.74 Aligned_cols=89 Identities=21% Similarity=0.218 Sum_probs=56.5
Q ss_pred cccccc--ccEEEEEeccCCCCCchHHHHHHHHHHHhC-CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc---
Q 022363 68 PLSFMK--SKLVLLVSHELSLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--- 141 (298)
Q Consensus 68 ~~~f~~--~KkILLISHELS~TGAPLlLleLA~~Lkq~-G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~--- 141 (298)
|+.+-+ .+.|++++ .+.+|=--+...||..|.+. |..|.++.+.-.. ...+..|...-...|++++....
T Consensus 92 ~~~~~~~~~~vI~ivG--~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r--~~a~~ql~~~~~~~~l~v~~~~~~~d 167 (433)
T 2xxa_A 92 TLNLAAQPPAVVLMAG--LQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR--PAAIKQLETLAEQVGVDFFPSDVGQK 167 (433)
T ss_dssp CCCCCSSSSEEEEEEC--STTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS--TTHHHHHHHHHHHHTCEECCCCSSSC
T ss_pred cccccCCCCeEEEEEC--CCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC--ccHHHHHHhhcccCCeeEEeCCCCCC
Confidence 455532 34566666 48899999999999999999 9999988844211 11111222223345888886421
Q ss_pred -----hhHHHhh--hccCEEEEechh
Q 022363 142 -----QETINTA--LKADLIVLNTAV 160 (298)
Q Consensus 142 -----~~~i~~A--~~aDLVIaNT~v 160 (298)
.+.+..+ .++|+||+-|.-
T Consensus 168 p~~i~~~~l~~~~~~~~D~VIIDTpG 193 (433)
T 2xxa_A 168 PVDIVNAALKEAKLKFYDVLLVDTAG 193 (433)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 1233333 589999999963
No 144
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=60.09 E-value=27 Score=29.38 Aligned_cols=83 Identities=18% Similarity=0.181 Sum_probs=51.2
Q ss_pred ccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHh
Q 022363 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINT 147 (298)
Q Consensus 68 ~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~ 147 (298)
-+-||+-++|.+|. ++.-|. .+|..|.+.|++|.++..+..+ .++....+.|+....+.. ..
T Consensus 17 ~~~~m~mmkI~IIG--~G~mG~-----~la~~l~~~g~~V~~v~~r~~~-------~~~~l~~~~g~~~~~~~~----~~ 78 (220)
T 4huj_A 17 NLYFQSMTTYAIIG--AGAIGS-----ALAERFTAAQIPAIIANSRGPA-------SLSSVTDRFGASVKAVEL----KD 78 (220)
T ss_dssp CTTGGGSCCEEEEE--CHHHHH-----HHHHHHHHTTCCEEEECTTCGG-------GGHHHHHHHTTTEEECCH----HH
T ss_pred chhhhcCCEEEEEC--CCHHHH-----HHHHHHHhCCCEEEEEECCCHH-------HHHHHHHHhCCCcccChH----HH
Confidence 45567778899997 444343 5677888899999886655432 122222334766654321 23
Q ss_pred hhccCEEEEechhchHHHHHHhh
Q 022363 148 ALKADLIVLNTAVAGKWLDAVLK 170 (298)
Q Consensus 148 A~~aDLVIaNT~v~g~wl~~l~~ 170 (298)
+.++|+||..+- ...+.++++
T Consensus 79 ~~~aDvVilavp--~~~~~~v~~ 99 (220)
T 4huj_A 79 ALQADVVILAVP--YDSIADIVT 99 (220)
T ss_dssp HTTSSEEEEESC--GGGHHHHHT
T ss_pred HhcCCEEEEeCC--hHHHHHHHH
Confidence 578999999875 444555553
No 145
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=60.02 E-value=47 Score=27.34 Aligned_cols=79 Identities=20% Similarity=0.156 Sum_probs=44.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--e--ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--I--SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v--~--~~k~~~~i~- 146 (298)
|++|+||+. +-+| -+=.++++.|.+.|++|.++.....+.. ..+.+++...+..+ + +-...++++
T Consensus 5 l~~k~vlVT----Gasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 74 (258)
T 3afn_B 5 LKGKRVLIT----GSSQ--GIGLATARLFARAGAKVGLHGRKAPANI----DETIASMRADGGDAAFFAADLATSEACQQ 74 (258)
T ss_dssp GTTCEEEET----TCSS--HHHHHHHHHHHHTTCEEEEEESSCCTTH----HHHHHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEe----CCCC--hHHHHHHHHHHHCCCEEEEECCCchhhH----HHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 567876653 2222 3556899999999999888764422211 12334444444332 2 112223332
Q ss_pred -------hhhccCEEEEechh
Q 022363 147 -------TALKADLIVLNTAV 160 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v 160 (298)
....+|.||.|..+
T Consensus 75 ~~~~~~~~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 75 LVDEFVAKFGGIDVLINNAGG 95 (258)
T ss_dssp HHHHHHHHHSSCSEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 12379999999875
No 146
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=59.81 E-value=23 Score=33.13 Aligned_cols=59 Identities=19% Similarity=0.266 Sum_probs=44.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC--CCCchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK--PSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~--G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
.|++++| |+-..-+|+|..|++.|.+|.++.... +..+.++...+.+.+.++||++...
T Consensus 185 ~~~vvVi-------GgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~gv~~~~~ 245 (488)
T 3dgz_A 185 PGKTLVV-------GASYVALECAGFLTGIGLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKG 245 (488)
T ss_dssp CCSEEEE-------CCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEET
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCceEEEEcCcccccCCHHHHHHHHHHHHHCCCEEEeC
Confidence 4567777 566678899999999999999997432 1234566677888888899998754
No 147
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=59.75 E-value=73 Score=28.90 Aligned_cols=90 Identities=19% Similarity=0.157 Sum_probs=58.9
Q ss_pred cccc--ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh--ch-
Q 022363 68 PLSF--MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK--GQ- 142 (298)
Q Consensus 68 ~~~f--~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k--~~- 142 (298)
|++| -+++.|++++. +.+|---++..||..++..|..|.++...- ........|..-..+.|++++... ++
T Consensus 96 ~~~~~~~~~~vi~ivG~--~GsGKTTl~~~LA~~l~~~g~kV~lv~~D~--~r~~a~eqL~~~~~~~gl~~~~~~s~~~~ 171 (306)
T 1vma_A 96 KLNVPPEPPFVIMVVGV--NGTGKTTSCGKLAKMFVDEGKSVVLAAADT--FRAAAIEQLKIWGERVGATVISHSEGADP 171 (306)
T ss_dssp CCCCCSSSCEEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEECT--TCHHHHHHHHHHHHHHTCEEECCSTTCCH
T ss_pred CCcccCCCCeEEEEEcC--CCChHHHHHHHHHHHHHhcCCEEEEEcccc--ccHHHHHHHHHHHHHcCCcEEecCCccCH
Confidence 4554 34677888885 899999999999999999999998877432 111122223333445588887541 11
Q ss_pred --h---HHH--hhhccCEEEEechhc
Q 022363 143 --E---TIN--TALKADLIVLNTAVA 161 (298)
Q Consensus 143 --~---~i~--~A~~aDLVIaNT~v~ 161 (298)
. .+. ...++|+||+-|.-.
T Consensus 172 ~~v~~~al~~a~~~~~dvvIiDtpg~ 197 (306)
T 1vma_A 172 AAVAFDAVAHALARNKDVVIIDTAGR 197 (306)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCc
Confidence 1 222 356899999999843
No 148
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=59.70 E-value=26 Score=32.30 Aligned_cols=76 Identities=13% Similarity=0.148 Sum_probs=46.8
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCC----chhhhhhhHHHHHHcCCceeehhc---hhHHH-
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSE----EDEVIYSLEHKMWDRGVQVISAKG---QETIN- 146 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~----~g~v~~~L~~kll~rgI~v~~~k~---~~~i~- 146 (298)
.||+|. |.|=+...-.+.|.+.|++|+.+..+.... .....+++.+..++.||+++.-.. .+.++
T Consensus 3 mrivf~-------Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~ 75 (314)
T 3tqq_A 3 LKIVFA-------GTPQFAVPTLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQPFSLRDEVEQEK 75 (314)
T ss_dssp CEEEEE-------ECSGGGHHHHHHHHHSSSEEEEEECCCC----------CCHHHHHHHHTTCCEECCSCSSSHHHHHH
T ss_pred cEEEEE-------CCCHHHHHHHHHHHHCCCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEECcccCCCHHHHHH
Confidence 456665 455555566677778899998887642111 111234677888889999985422 22222
Q ss_pred -hhhccCEEEEe
Q 022363 147 -TALKADLIVLN 157 (298)
Q Consensus 147 -~A~~aDLVIaN 157 (298)
...++|+||+-
T Consensus 76 l~~~~~Dliv~~ 87 (314)
T 3tqq_A 76 LIAMNADVMVVV 87 (314)
T ss_dssp HHTTCCSEEEEE
T ss_pred HHhcCCCEEEEc
Confidence 35699999974
No 149
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=59.64 E-value=24 Score=32.79 Aligned_cols=59 Identities=19% Similarity=0.299 Sum_probs=44.6
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC---CCCchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK---PSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~---G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+|+|++| |+-..-+|+|..|.+.|.+|.++.... +..+.++...+.+.+.++||++...
T Consensus 187 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~ 248 (478)
T 3dk9_A 187 PGRSVIV-------GAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKF 248 (478)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETT
T ss_pred CccEEEE-------CCCHHHHHHHHHHHHcCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeC
Confidence 5788888 455567899999999999999987432 1234566667788888889988754
No 150
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=59.57 E-value=20 Score=30.00 Aligned_cols=45 Identities=13% Similarity=0.219 Sum_probs=29.2
Q ss_pred CCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 65 KSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 65 ~~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
++.+....++|+||+..=-.+ .=+=.++|+.|.+.|+.|.++...
T Consensus 5 ~~~~~~~~~~k~vlITGa~~~----~giG~~ia~~l~~~G~~V~~~~r~ 49 (271)
T 3ek2_A 5 HHHHMGFLDGKRILLTGLLSN----RSIAYGIAKACKREGAELAFTYVG 49 (271)
T ss_dssp ----CCTTTTCEEEECCCCST----TSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCccccCCCEEEEeCCCCC----CcHHHHHHHHHHHcCCCEEEEecc
Confidence 356778889998887531100 225568999999999998887643
No 151
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=59.13 E-value=19 Score=33.59 Aligned_cols=59 Identities=17% Similarity=0.331 Sum_probs=43.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+|+|++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++||++...
T Consensus 171 ~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 232 (458)
T 1lvl_A 171 PQHLVVV-------GGGYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLG 232 (458)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETT
T ss_pred CCeEEEE-------CcCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEEC
Confidence 5778887 45557889999999999999988743221 23455566778888889988754
No 152
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=59.09 E-value=24 Score=33.05 Aligned_cols=59 Identities=19% Similarity=0.331 Sum_probs=44.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+|++++| |+-..-+|+|..|.+.|.+|.++..... ..+.++...+.+.+.++||++...
T Consensus 185 ~~~vvVi-------GgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~ 246 (479)
T 2hqm_A 185 PKKVVVV-------GAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKL 246 (479)
T ss_dssp CSEEEEE-------CSSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeC
Confidence 5788888 4445779999999999999999874421 234556667788888889988754
No 153
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=59.02 E-value=50 Score=28.61 Aligned_cols=79 Identities=13% Similarity=0.075 Sum_probs=47.1
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-------cCCceeeh--hc
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-------RGVQVISA--KG 141 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~-------rgI~v~~~--k~ 141 (298)
.|++|+||+++ -|| .+=-++++.|.+.|++|..+....... .+. .+.+.+ .++.++.. ..
T Consensus 22 ~~~~~~vlVtG----atG--~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~Dl~d 90 (351)
T 3ruf_A 22 IFSPKTWLITG----VAG--FIGSNLLEKLLKLNQVVIGLDNFSTGH-QYN----LDEVKTLVSTEQWSRFCFIEGDIRD 90 (351)
T ss_dssp HHSCCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEECCSSCC-HHH----HHHHHHTSCHHHHTTEEEEECCTTC
T ss_pred CCCCCeEEEEC----CCc--HHHHHHHHHHHHCCCEEEEEeCCCCCc-hhh----hhhhhhccccccCCceEEEEccCCC
Confidence 35678887753 333 255688899999999999988543321 111 223332 35555422 23
Q ss_pred hhHHH-hhhccCEEEEechh
Q 022363 142 QETIN-TALKADLIVLNTAV 160 (298)
Q Consensus 142 ~~~i~-~A~~aDLVIaNT~v 160 (298)
..++. ...++|.||-+...
T Consensus 91 ~~~~~~~~~~~d~Vih~A~~ 110 (351)
T 3ruf_A 91 LTTCEQVMKGVDHVLHQAAL 110 (351)
T ss_dssp HHHHHHHTTTCSEEEECCCC
T ss_pred HHHHHHHhcCCCEEEECCcc
Confidence 33443 45589999988764
No 154
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=58.96 E-value=25 Score=33.41 Aligned_cols=59 Identities=20% Similarity=0.404 Sum_probs=44.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+|++++| |+-..-+|+|..|.+.|.+|.++...... ...++...+.+.+.++|+.+...
T Consensus 214 g~~vvVi-------GgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~ 275 (523)
T 1mo9_A 214 GSTVVVV-------GGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISG 275 (523)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEEC
Confidence 4788887 55567889999999999999988744321 24566667888888899988744
No 155
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=58.71 E-value=26 Score=29.75 Aligned_cols=58 Identities=19% Similarity=0.141 Sum_probs=40.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeeh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISA 139 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~-rgI~v~~~ 139 (298)
.++|+|++| |+-..-+|+|..|.+.|.+|.++........ ...+.+++.+ +||++...
T Consensus 141 ~~~~~v~Vv-------G~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~~~~~l~~~~gv~v~~~ 199 (311)
T 2q0l_A 141 YKNKEVAVL-------GGGDTAVEEAIYLANICKKVYLIHRRDGFRC---APITLEHAKNNDKIEFLTP 199 (311)
T ss_dssp GTTSEEEEE-------CCSHHHHHHHHHHHTTSSEEEEECSSSSCCS---CHHHHHHHHTCTTEEEETT
T ss_pred cCCCEEEEE-------CCCHHHHHHHHHHHhcCCEEEEEeeCCccCC---CHHHHHHHhhCCCeEEEeC
Confidence 367899988 5556889999999999999998874432111 1234566664 68887754
No 156
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=58.41 E-value=49 Score=30.13 Aligned_cols=91 Identities=20% Similarity=0.235 Sum_probs=56.7
Q ss_pred cccc--ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHH----HcCCcee-ehh
Q 022363 68 PLSF--MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW----DRGVQVI-SAK 140 (298)
Q Consensus 68 ~~~f--~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll----~rgI~v~-~~k 140 (298)
+++| -+++.|.+++. +.+|---++..||..|.+.|..|.++...-- .......|. .+. +.|++++ ...
T Consensus 97 ~l~~~~~~~~vI~ivG~--~G~GKTT~~~~LA~~l~~~g~kVllid~D~~--r~~a~~ql~-~~~~~~~~~~l~vip~~~ 171 (320)
T 1zu4_A 97 RIDFKENRLNIFMLVGV--NGTGKTTSLAKMANYYAELGYKVLIAAADTF--RAGATQQLE-EWIKTRLNNKVDLVKANK 171 (320)
T ss_dssp CCCCCTTSCEEEEEESS--TTSSHHHHHHHHHHHHHHTTCCEEEEECCCS--CHHHHHHHH-HHHTTTSCTTEEEECCSS
T ss_pred CccccCCCCeEEEEECC--CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc--chhHHHHHH-HHHhccccCCceEEeCCC
Confidence 4555 24566777763 9999999999999999999999988763321 111111111 222 4577777 221
Q ss_pred --------chhHHH--hhhccCEEEEechhchH
Q 022363 141 --------GQETIN--TALKADLIVLNTAVAGK 163 (298)
Q Consensus 141 --------~~~~i~--~A~~aDLVIaNT~v~g~ 163 (298)
..+.+. ...++|+||.-|.-...
T Consensus 172 ~~~~p~~~~~~~l~~~~~~~yD~VIIDTpg~l~ 204 (320)
T 1zu4_A 172 LNADPASVVFDAIKKAKEQNYDLLLIDTAGRLQ 204 (320)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCSEEEEECCCCGG
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcCCCccc
Confidence 112222 24689999999886544
No 157
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=58.41 E-value=13 Score=32.75 Aligned_cols=42 Identities=12% Similarity=0.131 Sum_probs=28.6
Q ss_pred ccEEEEEeccC----CCCCch-----HHHHHHHHHHHhCCCeEEEEeccCC
Q 022363 74 SKLVLLVSHEL----SLSGGP-----LLLMELAFLLRGVGTKVNWITIQKP 115 (298)
Q Consensus 74 ~KkILLISHEL----S~TGAP-----LlLleLA~~Lkq~G~~V~vL~~~~G 115 (298)
.||||+|--+. .-+|-| .=+..-...|++.|++|.+.+.+++
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g~ 53 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGG 53 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSSC
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 46777764332 223444 5566667899999999999996554
No 158
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=58.33 E-value=16 Score=32.46 Aligned_cols=58 Identities=12% Similarity=0.047 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchh-HHH----hhhccCEEEEechhc
Q 022363 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQE-TIN----TALKADLIVLNTAVA 161 (298)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~-~i~----~A~~aDLVIaNT~v~ 161 (298)
.=..+|+.|.+.|++|.++.+..... . ..|+.+.+-...+ .+. ....+|.+|.|.+++
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~~~l~---~---------~~g~~~~dv~~~~~~~~~v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGPVSLP---T---------PPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSCCCC---C---------CTTEEEEECCSHHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred HHHHHHHHHHHCCCEEEEEECCcccc---c---------CCCCeEEccCcHHHHHHHHHHhcCCCCEEEECCccc
Confidence 55788999999999999887432110 0 1133444332222 222 356899999998875
No 159
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=58.06 E-value=39 Score=28.75 Aligned_cols=83 Identities=20% Similarity=0.182 Sum_probs=47.1
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCC----cee--ehh
Q 022363 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGV----QVI--SAK 140 (298)
Q Consensus 67 ~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI----~v~--~~k 140 (298)
.+..-+++|++|+.. -+|+ +=.++++.|.+.|++|.++... . .. ...+.+++.+.|. ..+ +-.
T Consensus 25 ~~m~~l~~k~vlVTG----asgg--IG~~la~~l~~~G~~V~~~~r~-~---~~-~~~~~~~~~~~~~~~~~~~~~~Dl~ 93 (279)
T 1xg5_A 25 PGMERWRDRLALVTG----ASGG--IGAAVARALVQQGLKVVGCART-V---GN-IEELAAECKSAGYPGTLIPYRCDLS 93 (279)
T ss_dssp TTCGGGTTCEEEEES----TTSH--HHHHHHHHHHHTTCEEEEEESC-H---HH-HHHHHHHHHHTTCSSEEEEEECCTT
T ss_pred ccccccCCCEEEEEC----CCch--HHHHHHHHHHHCCCEEEEEECC-h---HH-HHHHHHHHHhcCCCceEEEEEecCC
Confidence 344557888777653 3333 5578899999999998877632 2 11 1233445555442 122 112
Q ss_pred chhHHH--------hhhccCEEEEechh
Q 022363 141 GQETIN--------TALKADLIVLNTAV 160 (298)
Q Consensus 141 ~~~~i~--------~A~~aDLVIaNT~v 160 (298)
..++++ ....+|.||.|..+
T Consensus 94 ~~~~v~~~~~~~~~~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 94 NEEDILSMFSAIRSQHSGVDICINNAGL 121 (279)
T ss_dssp CHHHHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCC
Confidence 222332 12379999988764
No 160
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=57.86 E-value=6.6 Score=34.55 Aligned_cols=41 Identities=24% Similarity=0.263 Sum_probs=30.7
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
-|.++.||||++.= ..|==.=++.||+.|++.|++|.+++.
T Consensus 18 ~~~~~MRIL~~~~p--~~GHv~P~l~LA~~L~~rGh~Vt~~t~ 58 (400)
T 4amg_A 18 LYFQSMRALFITSP--GLSHILPTVPLAQALRALGHEVRYATG 58 (400)
T ss_dssp ---CCCEEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCCeEEEECCC--chhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 35677899999743 335555688999999999999999984
No 161
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=57.86 E-value=38 Score=26.22 Aligned_cols=70 Identities=19% Similarity=0.196 Sum_probs=46.2
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHHh--hhc
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETINT--ALK 150 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~~--A~~ 150 (298)
++|++++- ++.| ..+|+.|++.|++|.++-... .-.+++.+.|++++.. ...+.+.. ..+
T Consensus 8 ~~viIiG~--G~~G-----~~la~~L~~~g~~v~vid~~~---------~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ 71 (140)
T 3fwz_A 8 NHALLVGY--GRVG-----SLLGEKLLASDIPLVVIETSR---------TRVDELRERGVRAVLGNAANEEIMQLAHLEC 71 (140)
T ss_dssp SCEEEECC--SHHH-----HHHHHHHHHTTCCEEEEESCH---------HHHHHHHHTTCEEEESCTTSHHHHHHTTGGG
T ss_pred CCEEEECc--CHHH-----HHHHHHHHHCCCCEEEEECCH---------HHHHHHHHcCCCEEECCCCCHHHHHhcCccc
Confidence 45888862 4434 577899999999999887432 1235666779987743 33333442 468
Q ss_pred cCEEEEechh
Q 022363 151 ADLIVLNTAV 160 (298)
Q Consensus 151 aDLVIaNT~v 160 (298)
+|.||+.|--
T Consensus 72 ad~vi~~~~~ 81 (140)
T 3fwz_A 72 AKWLILTIPN 81 (140)
T ss_dssp CSEEEECCSC
T ss_pred CCEEEEECCC
Confidence 9999986653
No 162
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=57.75 E-value=74 Score=26.76 Aligned_cols=82 Identities=17% Similarity=0.299 Sum_probs=58.7
Q ss_pred CchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHH--------hhhccCEEEEech
Q 022363 88 GGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN--------TALKADLIVLNTA 159 (298)
Q Consensus 88 GAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~--------~A~~aDLVIaNT~ 159 (298)
..|=.|-|+.+..|..|..|++|-+...+ ..- .--.++|.+.|+.+-.....+-|+ .--+.|.|+.-|-
T Consensus 10 sdpeilkeivreikrqgvrvvllysdqde--krr-rerleefekqgvdvrtvedkedfrenireiwerypqldvvvivtt 86 (162)
T 2l82_A 10 SDPEILKEIVREIKRQGVRVVLLYSDQDE--KRR-RERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVVVIVTT 86 (162)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECCSCH--HHH-HHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHCTTCCEEEEEEC
T ss_pred CCHHHHHHHHHHHHhCCeEEEEEecCchH--HHH-HHHHHHHHHcCCceeeeccHHHHHHHHHHHHHhCCCCcEEEEEec
Confidence 45889999999999999999999855432 111 112356778899887553333232 4568899999888
Q ss_pred hchHHHHHHhhcc
Q 022363 160 VAGKWLDAVLKED 172 (298)
Q Consensus 160 v~g~wl~~l~~~~ 172 (298)
---.|+..++.+.
T Consensus 87 ddkewikdfieea 99 (162)
T 2l82_A 87 DDKEWIKDFIEEA 99 (162)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 8899999887553
No 163
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=57.52 E-value=32 Score=29.60 Aligned_cols=83 Identities=18% Similarity=0.199 Sum_probs=46.1
Q ss_pred ccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchh
Q 022363 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQE 143 (298)
Q Consensus 68 ~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~ 143 (298)
+...+++|+||+.. -+|+ +=.++++.|.+.|++|.++. +..+ .. ..+.+++.+.|.++. +-...+
T Consensus 38 ~~~~l~~k~vlITG----asgg--IG~~la~~L~~~G~~V~~~~-r~~~---~~-~~~~~~l~~~~~~~~~~~~Dl~d~~ 106 (285)
T 2c07_A 38 YYYCGENKVALVTG----AGRG--IGREIAKMLAKSVSHVICIS-RTQK---SC-DSVVDEIKSFGYESSGYAGDVSKKE 106 (285)
T ss_dssp CCCCCSSCEEEEES----TTSH--HHHHHHHHHTTTSSEEEEEE-SSHH---HH-HHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred ccccCCCCEEEEEC----CCcH--HHHHHHHHHHHcCCEEEEEc-CCHH---HH-HHHHHHHHhcCCceeEEECCCCCHH
Confidence 44557788776653 2333 55688999999999988844 3221 11 123344444343332 112233
Q ss_pred HHHh--------hhccCEEEEechhc
Q 022363 144 TINT--------ALKADLIVLNTAVA 161 (298)
Q Consensus 144 ~i~~--------A~~aDLVIaNT~v~ 161 (298)
+++. ...+|.||.|..+.
T Consensus 107 ~v~~~~~~~~~~~~~id~li~~Ag~~ 132 (285)
T 2c07_A 107 EISEVINKILTEHKNVDILVNNAGIT 132 (285)
T ss_dssp HHHHHHHHHHHHCSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 3331 24789999997653
No 164
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=57.19 E-value=87 Score=27.89 Aligned_cols=89 Identities=22% Similarity=0.220 Sum_probs=56.6
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh---c--
Q 022363 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK---G-- 141 (298)
Q Consensus 67 ~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k---~-- 141 (298)
++++|-+++.|.+++ -+.+|---++..||..+.+.|..|.++...-. .......+.......|++++... .
T Consensus 91 ~~i~~~~~~~i~i~g--~~G~GKTT~~~~la~~~~~~~~~v~l~~~d~~--~~~~~~ql~~~~~~~~l~~~~~~~~~~p~ 166 (295)
T 1ls1_A 91 RLPVLKDRNLWFLVG--LQGSGKTTTAAKLALYYKGKGRRPLLVAADTQ--RPAAREQLRLLGEKVGVPVLEVMDGESPE 166 (295)
T ss_dssp CCCCCCSSEEEEEEC--CTTTTHHHHHHHHHHHHHHTTCCEEEEECCSS--CHHHHHHHHHHHHHHTCCEEECCTTCCHH
T ss_pred ceeecCCCeEEEEEC--CCCCCHHHHHHHHHHHHHHcCCeEEEecCCcc--cHhHHHHHHHhcccCCeEEEEcCCCCCHH
Confidence 344554667666665 48899999999999999999999988773211 11111112222233488888531 1
Q ss_pred ---hhHHHhh--hccCEEEEech
Q 022363 142 ---QETINTA--LKADLIVLNTA 159 (298)
Q Consensus 142 ---~~~i~~A--~~aDLVIaNT~ 159 (298)
...+..+ .++|+||.-|.
T Consensus 167 ~l~~~~l~~~~~~~~D~viiDtp 189 (295)
T 1ls1_A 167 SIRRRVEEKARLEARDLILVDTA 189 (295)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHHHhCCCCEEEEeCC
Confidence 1233333 68999999998
No 165
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=57.16 E-value=29 Score=32.10 Aligned_cols=59 Identities=15% Similarity=0.347 Sum_probs=43.9
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHH-HHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKM-WDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~g~v~~~L~~kl-l~rgI~v~~~ 139 (298)
+|++++| |+-..-+|+|..|.+.|.+|.++...... .+.++...+.+.+ .++||++...
T Consensus 174 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~ 236 (468)
T 2qae_A 174 PKTMVVI-------GGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTS 236 (468)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECS
T ss_pred CceEEEE-------CCCHHHHHHHHHHHHhCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeC
Confidence 5788887 55567889999999999999988744221 3445566778888 8889988754
No 166
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=57.13 E-value=41 Score=29.21 Aligned_cols=85 Identities=18% Similarity=0.117 Sum_probs=46.7
Q ss_pred cCCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee-h-hc
Q 022363 64 TKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-A-KG 141 (298)
Q Consensus 64 ~~~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~-~-k~ 141 (298)
..+++...+++|+||+.. -|| -+=-++++.|.+.|++|.++....... .+.. +.+ .++..+. | ..
T Consensus 10 ~~~~~~~~~~~~~vlVTG----asG--~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~----~~l--~~v~~~~~Dl~d 76 (330)
T 2pzm_A 10 HSSGLVPRGSHMRILITG----GAG--CLGSNLIEHWLPQGHEILVIDNFATGK-REVL----PPV--AGLSVIEGSVTD 76 (330)
T ss_dssp ----CCSTTTCCEEEEET----TTS--HHHHHHHHHHGGGTCEEEEEECCSSSC-GGGS----CSC--TTEEEEECCTTC
T ss_pred cccCCcccCCCCEEEEEC----CCC--HHHHHHHHHHHHCCCEEEEEECCCccc-hhhh----hcc--CCceEEEeeCCC
Confidence 335667778889877652 223 355788999999999999887533211 1110 111 2333331 1 22
Q ss_pred hhHHH-hhh--ccCEEEEechhc
Q 022363 142 QETIN-TAL--KADLIVLNTAVA 161 (298)
Q Consensus 142 ~~~i~-~A~--~aDLVIaNT~v~ 161 (298)
..++. ... ++|.||-|....
T Consensus 77 ~~~~~~~~~~~~~D~vih~A~~~ 99 (330)
T 2pzm_A 77 AGLLERAFDSFKPTHVVHSAAAY 99 (330)
T ss_dssp HHHHHHHHHHHCCSEEEECCCCC
T ss_pred HHHHHHHHhhcCCCEEEECCccC
Confidence 33343 233 899999887643
No 167
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=56.71 E-value=7.5 Score=36.52 Aligned_cols=72 Identities=19% Similarity=0.264 Sum_probs=45.5
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhccC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~aD 152 (298)
++|+|++|. ++.+| |..|++|.+.|++|...=.+..++ + ...+. +|+++....... +...++|
T Consensus 4 ~~~~v~viG--~G~~G-----~~~a~~l~~~G~~v~~~D~~~~~~-~------~~~l~-~G~~~~~g~~~~--~~~~~~d 66 (439)
T 2x5o_A 4 QGKNVVIIG--LGLTG-----LSCVDFFLARGVTPRVMDTRMTPP-G------LDKLP-EAVERHTGSLND--EWLMAAD 66 (439)
T ss_dssp TTCCEEEEC--CHHHH-----HHHHHHHHTTTCCCEEEESSSSCT-T------GGGSC-TTSCEEESSCCH--HHHHTCS
T ss_pred CCCEEEEEe--ecHHH-----HHHHHHHHhCCCEEEEEECCCCcc-h------hHHhh-CCCEEEECCCcH--HHhccCC
Confidence 678898886 33333 556899999999998755433221 1 13345 799887443211 1223799
Q ss_pred EEEEechhc
Q 022363 153 LIVLNTAVA 161 (298)
Q Consensus 153 LVIaNT~v~ 161 (298)
+||+.+.+.
T Consensus 67 ~vV~s~gi~ 75 (439)
T 2x5o_A 67 LIVASPGIA 75 (439)
T ss_dssp EEEECTTSC
T ss_pred EEEeCCCCC
Confidence 999998763
No 168
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=56.71 E-value=30 Score=31.95 Aligned_cols=81 Identities=19% Similarity=0.304 Sum_probs=54.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchhH------
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQET------ 144 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~g~v~~~L~~kll~rgI~v~~~k~~~~------ 144 (298)
+|+|++| |+-..-+|+|..|++.|.+|.++..... ....++...+.+.+.++|+++.....-..
T Consensus 167 ~~~vvIi-------GgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~ 239 (455)
T 2yqu_A 167 PKRLIVV-------GGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAK 239 (455)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC
Confidence 5777777 4556788999999999999998874321 13455666778888888998875421111
Q ss_pred ---HH----hhhccCEEEEechhc
Q 022363 145 ---IN----TALKADLIVLNTAVA 161 (298)
Q Consensus 145 ---i~----~A~~aDLVIaNT~v~ 161 (298)
+. ....+|.||..|-..
T Consensus 240 ~v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 240 GARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp EEEEEETTSCEEEESEEEECSCEE
T ss_pred EEEEEECCCeEEEcCEEEECcCCC
Confidence 11 123689999877653
No 169
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=56.70 E-value=30 Score=32.01 Aligned_cols=80 Identities=18% Similarity=0.317 Sum_probs=54.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC--CchhhhhhhHHHHHHcCCceeehhchhHH------
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS--EEDEVIYSLEHKMWDRGVQVISAKGQETI------ 145 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~--~~g~v~~~L~~kll~rgI~v~~~k~~~~i------ 145 (298)
+|++++| |+-..-+|+|..|.+.|.+|.++...... .+.++...+.+.+.++|+++........+
T Consensus 176 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~ 248 (467)
T 1zk7_A 176 PERLAVI-------GSSVVALELAQAFARLGSKVTVLARNTLFFREDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGE 248 (467)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSCTTTTSCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTE
T ss_pred CCEEEEE-------CCCHHHHHHHHHHHHcCCEEEEEEECCccCCCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE
Confidence 5788888 44456799999999999999998743321 34566667888888889988754211111
Q ss_pred ---H---hhhccCEEEEechh
Q 022363 146 ---N---TALKADLIVLNTAV 160 (298)
Q Consensus 146 ---~---~A~~aDLVIaNT~v 160 (298)
. ....+|.||..|-.
T Consensus 249 ~~v~~~~~~i~aD~Vv~a~G~ 269 (467)
T 1zk7_A 249 FVLTTTHGELRADKLLVATGR 269 (467)
T ss_dssp EEEEETTEEEEESEEEECSCE
T ss_pred EEEEECCcEEEcCEEEECCCC
Confidence 1 12368999887654
No 170
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=56.25 E-value=19 Score=33.24 Aligned_cols=59 Identities=12% Similarity=0.273 Sum_probs=43.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+|+|++| |+-..-+|+|..|++.|.+|.++...... ...++...+.+.+.++||++...
T Consensus 177 ~~~vvVi-------GgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 238 (470)
T 1dxl_A 177 PKKLVVI-------GAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLK 238 (470)
T ss_dssp CSEEEES-------CCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeC
Confidence 5677776 44457789999999999999988744321 34556667788888889988754
No 171
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=56.20 E-value=31 Score=29.53 Aligned_cols=58 Identities=17% Similarity=0.075 Sum_probs=41.5
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
..+|+|++| |+-..-+|+|..|.+.|.+|.++.....-.. ...+.+++.++||++...
T Consensus 153 ~~~~~v~vi-------G~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~---~~~l~~~l~~~gv~i~~~ 210 (319)
T 3cty_A 153 FKGKRVVTI-------GGGNSGAIAAISMSEYVKNVTIIEYMPKYMC---ENAYVQEIKKRNIPYIMN 210 (319)
T ss_dssp GBTSEEEEE-------CCSHHHHHHHHHHTTTBSEEEEECSSSSCCS---CHHHHHHHHHTTCCEECS
T ss_pred cCCCeEEEE-------CCCHHHHHHHHHHHhhCCcEEEEEcCCccCC---CHHHHHHHhcCCcEEEcC
Confidence 457888888 4444678999999999999999874432111 124677888889988754
No 172
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=56.08 E-value=17 Score=28.67 Aligned_cols=74 Identities=20% Similarity=0.125 Sum_probs=43.8
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHH-HcCCceeeh--hchhHHHh
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW-DRGVQVISA--KGQETINT 147 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll-~rgI~v~~~--k~~~~i~~ 147 (298)
...+++|++++ ++. +=..++..|++.|++|.++... ++ . .+++. +.|+.++.. .....+..
T Consensus 16 ~~~~~~v~IiG--~G~-----iG~~la~~L~~~g~~V~vid~~-~~---~-----~~~~~~~~g~~~~~~d~~~~~~l~~ 79 (155)
T 2g1u_A 16 KQKSKYIVIFG--CGR-----LGSLIANLASSSGHSVVVVDKN-EY---A-----FHRLNSEFSGFTVVGDAAEFETLKE 79 (155)
T ss_dssp -CCCCEEEEEC--CSH-----HHHHHHHHHHHTTCEEEEEESC-GG---G-----GGGSCTTCCSEEEESCTTSHHHHHT
T ss_pred ccCCCcEEEEC--CCH-----HHHHHHHHHHhCCCeEEEEECC-HH---H-----HHHHHhcCCCcEEEecCCCHHHHHH
Confidence 44578899985 233 3345788999999998877632 11 1 12333 456665532 12223332
Q ss_pred --hhccCEEEEechh
Q 022363 148 --ALKADLIVLNTAV 160 (298)
Q Consensus 148 --A~~aDLVIaNT~v 160 (298)
..++|+||..|-.
T Consensus 80 ~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 80 CGMEKADMVFAFTND 94 (155)
T ss_dssp TTGGGCSEEEECSSC
T ss_pred cCcccCCEEEEEeCC
Confidence 4689999998764
No 173
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=56.05 E-value=16 Score=33.16 Aligned_cols=38 Identities=24% Similarity=0.301 Sum_probs=30.2
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
-++||+||+| .|.=.||+ -|.+.++.|++.|...+.+.
T Consensus 202 ~v~Gk~VlIV-DDii~TG~--Tl~~aa~~Lk~~Ga~~V~~~ 239 (284)
T 1u9y_A 202 DAKDRDVFIV-DDIISTGG--TMATAVKLLKEQGAKKIIAA 239 (284)
T ss_dssp CCTTCCEEEE-EEECSSSH--HHHHHHHHHHHTTCCSEEEE
T ss_pred cCCCCEEEEE-ecccCchH--HHHHHHHHHHHCCCcEEEEE
Confidence 4789998887 67777898 67899999999998744433
No 174
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=55.98 E-value=23 Score=30.42 Aligned_cols=57 Identities=12% Similarity=0.198 Sum_probs=42.5
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
.++|++++| .|++...+|+|..+++.|.+|.++..... +...+.+++.++|+++...
T Consensus 144 ~~~~~~~VI------ggG~~~~~e~a~~~~~~~~~v~i~~~~~~-----~~~~~~~~l~~~g~~~~~~ 200 (304)
T 4fk1_A 144 LKDQPLIII------SENEDHTLHMTKLVYNWSTDLVIATNGNE-----LSQTIMDELSNKNIPVITE 200 (304)
T ss_dssp GTTSCEEEE------CCSHHHHHHHHHHHTTTCSCEEEECSSCC-----CCHHHHHHHHTTTCCEECS
T ss_pred hcCCceeee------cCCCchhhhHHHHHHhCCceEEEEecccc-----chhhhhhhhhccceeEeee
Confidence 466777777 47888899999999999999987763322 2234577888888888754
No 175
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=55.36 E-value=25 Score=32.87 Aligned_cols=59 Identities=20% Similarity=0.352 Sum_probs=44.2
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+|+|++| |+-..-+|+|..|.+.|.+|.++..... ....++...+.+.+.++||++...
T Consensus 198 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~ 259 (491)
T 3urh_A 198 PASMIVV-------GGGVIGLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLG 259 (491)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEEC
Confidence 6778887 4455678999999999999998863321 134566667888888889988754
No 176
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=55.30 E-value=40 Score=28.95 Aligned_cols=75 Identities=13% Similarity=0.109 Sum_probs=44.3
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH---
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN--- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~--- 146 (298)
++||++|+.. |+-=+=.++|+.|.+.|++|.++..... .+.+.+.+.++..+.. ...++++
T Consensus 25 l~~k~vlVTG------as~gIG~aia~~l~~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 90 (260)
T 3gem_A 25 LSSAPILITG------ASQRVGLHCALRLLEHGHRVIISYRTEH--------ASVTELRQAGAVALYGDFSCETGIMAFI 90 (260)
T ss_dssp --CCCEEESS------TTSHHHHHHHHHHHHTTCCEEEEESSCC--------HHHHHHHHHTCEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEEC------CCCHHHHHHHHHHHHCCCEEEEEeCChH--------HHHHHHHhcCCeEEECCCCCHHHHHHHH
Confidence 5677666532 2223567899999999999887764432 2345565556555421 2222222
Q ss_pred -----hhhccCEEEEechh
Q 022363 147 -----TALKADLIVLNTAV 160 (298)
Q Consensus 147 -----~A~~aDLVIaNT~v 160 (298)
.....|.+|.|..+
T Consensus 91 ~~~~~~~g~iD~lv~nAg~ 109 (260)
T 3gem_A 91 DLLKTQTSSLRAVVHNASE 109 (260)
T ss_dssp HHHHHHCSCCSEEEECCCC
T ss_pred HHHHHhcCCCCEEEECCCc
Confidence 12478999998764
No 177
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=55.01 E-value=24 Score=32.62 Aligned_cols=76 Identities=20% Similarity=0.182 Sum_probs=49.5
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCch----hhhhhhHHHHHHcCCceeehh---chhHHH-
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEED----EVIYSLEHKMWDRGVQVISAK---GQETIN- 146 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g----~v~~~L~~kll~rgI~v~~~k---~~~~i~- 146 (298)
.||+|. |-|=+-..-.+.|.+.|++|+.+..+.....| ...+++.+..++.||+++.-. ..+.++
T Consensus 5 mrIvf~-------Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~~~~~~~~~~~~~ 77 (317)
T 3rfo_A 5 IKVVFM-------GTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQPLRIREKDEYEK 77 (317)
T ss_dssp SEEEEE-------CCSTTHHHHHHHHHHTTCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEECCSCTTSHHHHHH
T ss_pred eEEEEE-------eCCHHHHHHHHHHHHCCCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEccccCCCHHHHHH
Confidence 467765 56656666677777889999888765322111 123467888889999998542 222333
Q ss_pred -hhhccCEEEEe
Q 022363 147 -TALKADLIVLN 157 (298)
Q Consensus 147 -~A~~aDLVIaN 157 (298)
...++|+||+-
T Consensus 78 l~~~~~Dliv~~ 89 (317)
T 3rfo_A 78 VLALEPDLIVTA 89 (317)
T ss_dssp HHHHCCSEEEES
T ss_pred HHhcCCCEEEEc
Confidence 35699999975
No 178
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=54.96 E-value=67 Score=27.28 Aligned_cols=74 Identities=20% Similarity=0.152 Sum_probs=44.0
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCC-CeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-hhh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVG-TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TAL 149 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G-~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~-~A~ 149 (298)
+|+||++. -||. +=-++++.|.+.| ++|..+...... . -.+.+...|+.++.. ....++. ...
T Consensus 5 ~~~ilVtG----atG~--iG~~l~~~L~~~g~~~V~~~~R~~~~--~-----~~~~l~~~~~~~~~~D~~d~~~l~~~~~ 71 (299)
T 2wm3_A 5 KKLVVVFG----GTGA--QGGSVARTLLEDGTFKVRVVTRNPRK--K-----AAKELRLQGAEVVQGDQDDQVIMELALN 71 (299)
T ss_dssp CCEEEEET----TTSH--HHHHHHHHHHHHCSSEEEEEESCTTS--H-----HHHHHHHTTCEEEECCTTCHHHHHHHHT
T ss_pred CCEEEEEC----CCch--HHHHHHHHHHhcCCceEEEEEcCCCC--H-----HHHHHHHCCCEEEEecCCCHHHHHHHHh
Confidence 35555542 3343 4456778888878 999988754221 1 123455567777632 2334454 456
Q ss_pred ccCEEEEechh
Q 022363 150 KADLIVLNTAV 160 (298)
Q Consensus 150 ~aDLVIaNT~v 160 (298)
++|.||.|+..
T Consensus 72 ~~d~vi~~a~~ 82 (299)
T 2wm3_A 72 GAYATFIVTNY 82 (299)
T ss_dssp TCSEEEECCCH
T ss_pred cCCEEEEeCCC
Confidence 89999988753
No 179
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=54.91 E-value=90 Score=25.87 Aligned_cols=39 Identities=3% Similarity=-0.257 Sum_probs=20.4
Q ss_pred cccEEEEEeccC-CCCCchHHHHHHHHHHHhC-CCeEEEEe
Q 022363 73 KSKLVLLVSHEL-SLSGGPLLLMELAFLLRGV-GTKVNWIT 111 (298)
Q Consensus 73 ~~KkILLISHEL-S~TGAPLlLleLA~~Lkq~-G~~V~vL~ 111 (298)
++++|-+|.++. +..--.-++-.+-..+++. |+.+.+..
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~ 47 (304)
T 3gbv_A 7 KKYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANI 47 (304)
T ss_dssp CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEE
T ss_pred CcceEEEEecCCCCchHHHHHHHHHHHHHHHHHhCCeEEEE
Confidence 345666666665 3332233344444556666 66666554
No 180
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=54.77 E-value=19 Score=33.16 Aligned_cols=81 Identities=26% Similarity=0.326 Sum_probs=53.0
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhHHH--
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQETIN-- 146 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----~~g~v~~~L~~kll~rgI~v~~~k~~~~i~-- 146 (298)
++|++++| |+-..-+|+|..|++.|.+|.++...... .+.++...+.+.+.++ +.+........+.
T Consensus 147 ~~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~ 218 (449)
T 3kd9_A 147 KVENVVII-------GGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGE 218 (449)
T ss_dssp CCCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECS
T ss_pred CCCeEEEE-------CCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEecc
Confidence 57899998 44456789999999999999998743221 3445555666667666 7776442111110
Q ss_pred ----------hhhccCEEEEechhc
Q 022363 147 ----------TALKADLIVLNTAVA 161 (298)
Q Consensus 147 ----------~A~~aDLVIaNT~v~ 161 (298)
....+|.||.-|-..
T Consensus 219 ~~v~~v~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 219 ERVEKVVTDAGEYKAELVILATGIK 243 (449)
T ss_dssp SSCCEEEETTEEEECSEEEECSCEE
T ss_pred CcEEEEEeCCCEEECCEEEEeeCCc
Confidence 124689999877553
No 181
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=54.57 E-value=58 Score=26.91 Aligned_cols=41 Identities=22% Similarity=0.050 Sum_probs=24.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
++++|-+|..+++..--.-++-.+...+++.|+++.+....
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~ 47 (277)
T 3e61_A 7 KSKLIGLLLPDMSNPFFTLIARGVEDVALAHGYQVLIGNSD 47 (277)
T ss_dssp ---CEEEEESCTTSHHHHHHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35567777766554333334555667788888888776543
No 182
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=54.41 E-value=1.3e+02 Score=27.63 Aligned_cols=59 Identities=8% Similarity=0.120 Sum_probs=34.1
Q ss_pred cccHHHHHHHHHhcccccccccCCceEEEecCc--HHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEEecc
Q 022363 208 IDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNS--KELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 278 (298)
Q Consensus 208 ~~S~AtA~yw~~r~~~~~~Ikl~~~~vv~L~~s--~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~~~s 278 (298)
..|+..++++.+.--++.+| +-.||. |.+.+ ... ...++.+|+++|++++..++....+
T Consensus 152 ~~te~~~~~l~~~G~~~~~I-------~vtGnp~~D~~~~----~~~-~~~~~~~~~~lgl~~~~~iLvt~hr 212 (385)
T 4hwg_A 152 TLTEHARRYLIAEGLPAELT-------FKSGSHMPEVLDR----FMP-KILKSDILDKLSLTPKQYFLISSHR 212 (385)
T ss_dssp ESSHHHHHHHHHTTCCGGGE-------EECCCSHHHHHHH----HHH-HHHHCCHHHHTTCCTTSEEEEEECC
T ss_pred cCCHHHHHHHHHcCCCcCcE-------EEECCchHHHHHH----hhh-hcchhHHHHHcCCCcCCEEEEEeCC
Confidence 45777777776532233333 334553 33332 111 2256789999999988877766653
No 183
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=54.29 E-value=38 Score=32.24 Aligned_cols=72 Identities=14% Similarity=0.286 Sum_probs=47.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhccC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~aD 152 (298)
+.|+|++|. +..+| |--+|++|++.|++|...=.+.. +..+++.+.|+++..-.... ...++|
T Consensus 18 ~~~~v~viG--iG~sG----~s~~A~~l~~~G~~V~~~D~~~~--------~~~~~l~~~gi~~~~g~~~~---~~~~a~ 80 (491)
T 2f00_A 18 RVRHIHFVG--IGGAG----MGGIAEVLANEGYQISGSDLAPN--------PVTQQLMNLGATIYFNHRPE---NVRDAS 80 (491)
T ss_dssp TCCEEEEET--TTSTT----HHHHHHHHHHTTCEEEEECSSCC--------HHHHHHHHTTCEEESSCCGG---GGTTCS
T ss_pred cCCEEEEEE--cCHHH----HHHHHHHHHhCCCeEEEECCCCC--------HHHHHHHHCCCEEECCCCHH---HcCCCC
Confidence 357888875 34444 22378999999999886433221 23457777899997432222 235799
Q ss_pred EEEEechhc
Q 022363 153 LIVLNTAVA 161 (298)
Q Consensus 153 LVIaNT~v~ 161 (298)
+||....+.
T Consensus 81 ~vv~s~~i~ 89 (491)
T 2f00_A 81 VVVVSSAIS 89 (491)
T ss_dssp EEEECTTCC
T ss_pred EEEECCCCC
Confidence 999998763
No 184
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=53.83 E-value=43 Score=31.19 Aligned_cols=59 Identities=19% Similarity=0.267 Sum_probs=44.3
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC--CCCchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK--PSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~--G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
.|++++| |+-..-+|+|..|.+.|.+|.++.... +..+.++...+.+.+.++||.+...
T Consensus 187 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~ 247 (483)
T 3dgh_A 187 PGKTLVV-------GAGYIGLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRK 247 (483)
T ss_dssp CCEEEEE-------CCSHHHHHHHHHHHHTTCEEEEEESSCSSTTSCHHHHHHHHHHHHHTTCCEEET
T ss_pred CCcEEEE-------CCCHHHHHHHHHHHHcCCEEEEEeCCCCCcccCHHHHHHHHHHHHhCCCEEEeC
Confidence 4678887 455577899999999999999997421 1134566667788888899998754
No 185
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=53.75 E-value=25 Score=32.01 Aligned_cols=104 Identities=21% Similarity=0.136 Sum_probs=51.9
Q ss_pred ccccccccEEEEEe-c--cCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCC-------------chhhhhhhHHHHHH
Q 022363 68 PLSFMKSKLVLLVS-H--ELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSE-------------EDEVIYSLEHKMWD 131 (298)
Q Consensus 68 ~~~f~~~KkILLIS-H--ELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~-------------~g~v~~~L~~kll~ 131 (298)
..-||++.|||+|. | +-|.+.+ ++=..++.|++.|++|.++=...-.. .++...+..+.-..
T Consensus 16 ~~~~m~~MKiLII~aHP~~~S~n~a--L~~~~~~~l~~~G~eV~v~DLy~~~f~p~l~~~~~~~~~~~~~~~~~~~~~~~ 93 (280)
T 4gi5_A 16 ENLYFQSMKVLLIYAHPEPRSLNGA--LKNFAIRHLQQAGHEVQVSDLYAMRWKAGYDADDSGAPPVGEFWRPTLDSKQA 93 (280)
T ss_dssp ------CCEEEEEECCSCTTSHHHH--HHHHHHHHHHHTTCEEEEEETTTTTCCCSCCGGGSSSSCSSSSCCHHHHHHHH
T ss_pred CcchhhCCeEEEEEeCCCCccHHHH--HHHHHHHHHHHCCCeEEEEEccccCCCCcCCHHHhcccccccccChhhHHHHH
Confidence 34688888888885 3 2233333 45567789999999999886432110 00011111111111
Q ss_pred cCCceeehhchhHHHhhhccCEEEEec--------hhchHHHHHHhhccC
Q 022363 132 RGVQVISAKGQETINTALKADLIVLNT--------AVAGKWLDAVLKEDV 173 (298)
Q Consensus 132 rgI~v~~~k~~~~i~~A~~aDLVIaNT--------~v~g~wl~~l~~~~~ 173 (298)
.+-....+--.+..+....+|.||.-+ +..=.|+|.+..+.+
T Consensus 94 ~~~~~~~~dv~~~~~~l~~aD~iv~~~P~~w~~~Pa~lK~~iDrv~~~g~ 143 (280)
T 4gi5_A 94 FAQGTQSADIVAEQEKLLWADTVIFQFPLWWFSMPAIMKGWIDRVYAWGF 143 (280)
T ss_dssp HHHTCSCHHHHHHHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHHSCBTT
T ss_pred hhcCCCcHHHHHHHHHHHhCCEEEEEeccccccCcHHHHHHHHHhcccCc
Confidence 111112221222334567899999875 344678888875444
No 186
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=53.70 E-value=21 Score=33.36 Aligned_cols=59 Identities=10% Similarity=0.283 Sum_probs=43.8
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+|++++| |+-..-+|+|..|++.|.+|.++..... ..+.++...+.+.+.++||.+...
T Consensus 185 ~~~vvVi-------GgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~ 246 (482)
T 1ojt_A 185 PGKLLII-------GGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVN 246 (482)
T ss_dssp CSEEEEE-------SCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEEC
Confidence 5777777 5556789999999999999999874322 134556667778888888887754
No 187
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=53.64 E-value=33 Score=33.05 Aligned_cols=59 Identities=17% Similarity=0.229 Sum_probs=43.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC--CCCchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK--PSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~--G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+|++++| |+-..-+|+|..|.+.|.+|.++.... +..+.++...+.+.+.++||++...
T Consensus 286 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~ 346 (598)
T 2x8g_A 286 PGKTLVI-------GASYVALECAGFLASLGGDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKL 346 (598)
T ss_dssp CCSEEEE-------CCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEET
T ss_pred CCEEEEE-------CCCHHHHHHHHHHHHcCCEEEEEECCcCcCcCCHHHHHHHHHHHHhCCCEEEEC
Confidence 5677777 566678999999999999999998431 1123456566777888889988743
No 188
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=53.59 E-value=80 Score=26.19 Aligned_cols=36 Identities=19% Similarity=0.262 Sum_probs=25.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
+++|+||+.. -+|+ +=.++++.|.+.|++|.++..+
T Consensus 10 ~~~k~vlVTG----asgg--iG~~~a~~l~~~G~~V~~~~r~ 45 (265)
T 2o23_A 10 VKGLVAVITG----GASG--LGLATAERLVGQGASAVLLDLP 45 (265)
T ss_dssp CTTCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCEEEEEC----CCCh--HHHHHHHHHHHCCCEEEEEeCC
Confidence 5788776653 2332 5578999999999998887744
No 189
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=53.31 E-value=32 Score=29.12 Aligned_cols=57 Identities=26% Similarity=0.341 Sum_probs=40.5
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeeh
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISA 139 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~-rgI~v~~~ 139 (298)
++|+|++| |+-..-+|+|..|.+.|.+|.++........+ ..+.+++.+ +|+++...
T Consensus 143 ~~~~v~Vv-------G~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~---~~~~~~l~~~~gv~v~~~ 200 (310)
T 1fl2_A 143 KGKRVAVI-------GGGNSGVEAAIDLAGIVEHVTLLEFAPEMKAD---QVLQDKLRSLKNVDIILN 200 (310)
T ss_dssp BTCEEEEE-------CCSHHHHHHHHHHHTTBSEEEEECSSSSCCSC---HHHHHHHHTCTTEEEESS
T ss_pred CCCEEEEE-------CCCHHHHHHHHHHHHhCCEEEEEEeCcccCcc---HHHHHHHhhCCCeEEecC
Confidence 57888888 55567899999999999999998743321111 235666776 58887654
No 190
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=53.18 E-value=22 Score=29.70 Aligned_cols=80 Identities=14% Similarity=0.084 Sum_probs=44.2
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN 146 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~ 146 (298)
-+++|+||+.. -+|+ +=.++++.|.+.|++|.++..+..+ . ...+.+++.+.|..+. +-.....++
T Consensus 18 ~~~~k~vlItG----asgg--iG~~la~~l~~~G~~v~~~~r~~~~---~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~ 87 (274)
T 1ja9_A 18 PLAGKVALTTG----AGRG--IGRGIAIELGRRGASVVVNYGSSSK---A-AEEVVAELKKLGAQGVAIQADISKPSEVV 87 (274)
T ss_dssp TTTTCEEEETT----TTSH--HHHHHHHHHHHTTCEEEEEESSCHH---H-HHHHHHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred CCCCCEEEEeC----CCch--HHHHHHHHHHHCCCEEEEEcCCchH---H-HHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 36788776542 2332 5578899999999998887642221 1 1123344444443322 112222332
Q ss_pred --------hhhccCEEEEechh
Q 022363 147 --------TALKADLIVLNTAV 160 (298)
Q Consensus 147 --------~A~~aDLVIaNT~v 160 (298)
....+|.||.|..+
T Consensus 88 ~~~~~~~~~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 88 ALFDKAVSHFGGLDFVMSNSGM 109 (274)
T ss_dssp HHHHHHHHHHSCEEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 12378999988764
No 191
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=53.14 E-value=16 Score=30.41 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=29.3
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~ 108 (298)
..+||+||+| .|.-.||+ -|.++++.|++.|..++
T Consensus 119 ~~~gk~VLlV-DDvitTG~--Tl~~~~~~L~~~Ga~~v 153 (187)
T 1g2q_A 119 IPAGSNVIIV-DDIIATGG--SAAAAGELVEQLEANLL 153 (187)
T ss_dssp SCTTCEEEEE-EEEESSCH--HHHHHHHHHHHTTCEEE
T ss_pred CCCcCEEEEE-CCCcccHH--HHHHHHHHHHHcCCeEE
Confidence 3689999887 78888999 67799999999998854
No 192
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=53.08 E-value=1e+02 Score=25.98 Aligned_cols=88 Identities=16% Similarity=0.183 Sum_probs=48.3
Q ss_pred ccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCc-------hhhhhhhHHHHHHcCCceee--
Q 022363 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE-------DEVIYSLEHKMWDRGVQVIS-- 138 (298)
Q Consensus 68 ~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~-------g~v~~~L~~kll~rgI~v~~-- 138 (298)
+..-++||++|+.. |+-=+=.++|+.|.+.|++|+++........ .+-...+..++...|..+..
T Consensus 4 ~m~~l~gk~vlVTG------as~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (287)
T 3pxx_A 4 SMGRVQDKVVLVTG------GARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAE 77 (287)
T ss_dssp SCCTTTTCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEE
T ss_pred cccccCCCEEEEeC------CCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEE
Confidence 34457788776643 2223557899999999999988764322111 11112233344444443331
Q ss_pred -h-hchhHHH--------hhhccCEEEEechhc
Q 022363 139 -A-KGQETIN--------TALKADLIVLNTAVA 161 (298)
Q Consensus 139 -~-k~~~~i~--------~A~~aDLVIaNT~v~ 161 (298)
| ....+++ .....|.+|.|..+.
T Consensus 78 ~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 110 (287)
T 3pxx_A 78 VDVRDRAAVSRELANAVAEFGKLDVVVANAGIC 110 (287)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 1 2222222 224899999998754
No 193
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=52.95 E-value=32 Score=32.50 Aligned_cols=80 Identities=16% Similarity=0.334 Sum_probs=55.2
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhC---CCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchh----
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGV---GTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQE---- 143 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~---G~~V~vL~~~~G---~~~g~v~~~L~~kll~rgI~v~~~k~~~---- 143 (298)
+|++++| |+-..-+|+|..|++. |.+|.++..... ..+.++...+.+.+.++||++.......
T Consensus 191 ~~~vvVi-------GgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 263 (495)
T 2wpf_A 191 PRRVLTV-------GGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSL 263 (495)
T ss_dssp CSEEEEE-------CSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEE
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEE
Confidence 4677777 5556788999999999 999999984432 1345666678888888999887542111
Q ss_pred ------HHHh----hhccCEEEEechh
Q 022363 144 ------TINT----ALKADLIVLNTAV 160 (298)
Q Consensus 144 ------~i~~----A~~aDLVIaNT~v 160 (298)
.+.+ ...+|+||..|-.
T Consensus 264 ~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 264 NTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp CTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred cCCceEEEEECCCcEEEcCEEEECCCC
Confidence 1111 2468999987754
No 194
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=52.82 E-value=32 Score=28.60 Aligned_cols=84 Identities=17% Similarity=0.191 Sum_probs=44.2
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee--ehhchh
Q 022363 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI--SAKGQE 143 (298)
Q Consensus 66 ~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~--~~k~~~ 143 (298)
+.+....++|+||+.. |+.=+=.++|+.|.+.|+.|.++..... .. ..+.+++. ..+... +-...+
T Consensus 6 ~~~~~~~~~k~vlVTG------as~gIG~~~a~~l~~~G~~V~~~~r~~~----~~-~~~~~~~~-~~~~~~~~D~~~~~ 73 (249)
T 3f9i_A 6 HHHMIDLTGKTSLITG------ASSGIGSAIARLLHKLGSKVIISGSNEE----KL-KSLGNALK-DNYTIEVCNLANKE 73 (249)
T ss_dssp ---CCCCTTCEEEETT------TTSHHHHHHHHHHHHTTCEEEEEESCHH----HH-HHHHHHHC-SSEEEEECCTTSHH
T ss_pred ccccccCCCCEEEEEC------CCChHHHHHHHHHHHCCCEEEEEcCCHH----HH-HHHHHHhc-cCccEEEcCCCCHH
Confidence 4566667888777643 2233567899999999999887763321 11 11222221 122222 112223
Q ss_pred HHH----hhhccCEEEEechhc
Q 022363 144 TIN----TALKADLIVLNTAVA 161 (298)
Q Consensus 144 ~i~----~A~~aDLVIaNT~v~ 161 (298)
++. .....|.+|.|..+.
T Consensus 74 ~~~~~~~~~~~id~li~~Ag~~ 95 (249)
T 3f9i_A 74 ECSNLISKTSNLDILVCNAGIT 95 (249)
T ss_dssp HHHHHHHTCSCCSEEEECCC--
T ss_pred HHHHHHHhcCCCCEEEECCCCC
Confidence 333 234799999987754
No 195
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=52.34 E-value=74 Score=26.32 Aligned_cols=40 Identities=13% Similarity=0.059 Sum_probs=26.8
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
+++|-+|..+.+..--.-++-.+-..+++.|+++.+....
T Consensus 15 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 54 (298)
T 3tb6_A 15 NKTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTN 54 (298)
T ss_dssp CCEEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3677777777665544455666667788888888776643
No 196
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=52.34 E-value=31 Score=28.94 Aligned_cols=60 Identities=20% Similarity=0.234 Sum_probs=41.9
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCceeeh
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVISA 139 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~r-gI~v~~~ 139 (298)
.+.++|+|++| |+-..-+|+|..|.+.|.+|.++........+ ..+.++++++ ||.+...
T Consensus 150 ~~~~~~~v~vv-------G~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~~---~~~~~~~~~~~gv~~~~~ 210 (323)
T 3f8d_A 150 PLFKNRVVAVI-------GGGDSALEGAEILSSYSTKVYLIHRRDTFKAQ---PIYVETVKKKPNVEFVLN 210 (323)
T ss_dssp GGGTTCEEEEE-------CCSHHHHHHHHHHHHHSSEEEEECSSSSCCSC---HHHHHHHHTCTTEEEECS
T ss_pred hHcCCCEEEEE-------CCCHHHHHHHHHHHHhCCeEEEEEeCCCCCcC---HHHHHHHHhCCCcEEEeC
Confidence 34578889988 55557789999999999999998854332221 1345666665 8887754
No 197
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=52.31 E-value=1.1e+02 Score=25.87 Aligned_cols=79 Identities=22% Similarity=0.271 Sum_probs=43.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--e--ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--I--SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v--~--~~k~~~~i~- 146 (298)
|++|++|+. +-+|+ +=.++++.|.+.|++|.++..+.. ... .+.+++...+.++ + +-...++++
T Consensus 32 l~~k~vlIT----Gasgg--IG~~la~~L~~~G~~V~~~~r~~~-~~~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 100 (279)
T 3ctm_A 32 LKGKVASVT----GSSGG--IGWAVAEAYAQAGADVAIWYNSHP-ADE----KAEHLQKTYGVHSKAYKCNISDPKSVEE 100 (279)
T ss_dssp CTTCEEEET----TTTSS--HHHHHHHHHHHHTCEEEEEESSSC-CHH----HHHHHHHHHCSCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEE----CCCcH--HHHHHHHHHHHCCCEEEEEeCCHH-HHH----HHHHHHHhcCCcceEEEeecCCHHHHHH
Confidence 678876654 22333 556888899999999888764432 111 2233333334332 2 112222232
Q ss_pred -------hhhccCEEEEechhc
Q 022363 147 -------TALKADLIVLNTAVA 161 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v~ 161 (298)
....+|.||.|..+.
T Consensus 101 ~~~~~~~~~g~id~li~~Ag~~ 122 (279)
T 3ctm_A 101 TISQQEKDFGTIDVFVANAGVT 122 (279)
T ss_dssp HHHHHHHHHSCCSEEEECGGGS
T ss_pred HHHHHHHHhCCCCEEEECCccc
Confidence 123599999987654
No 198
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=52.30 E-value=1.1e+02 Score=25.99 Aligned_cols=79 Identities=19% Similarity=0.224 Sum_probs=45.3
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--e--ehhchhHHH
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--I--SAKGQETIN 146 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v--~--~~k~~~~i~ 146 (298)
-+++|+||+.. -+|+ +=.++++.|.+.|++|.++.... .. ...+.+++.+.|.++ + +-...++++
T Consensus 28 ~l~~k~vlITG----asgg--IG~~la~~L~~~G~~V~~~~r~~----~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~ 96 (272)
T 1yb1_A 28 SVTGEIVLITG----AGHG--IGRLTAYEFAKLKSKLVLWDINK----HG-LEETAAKCKGLGAKVHTFVVDCSNREDIY 96 (272)
T ss_dssp CCTTCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEESCH----HH-HHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred ccCCCEEEEEC----CCch--HHHHHHHHHHHCCCEEEEEEcCH----HH-HHHHHHHHHhcCCeEEEEEeeCCCHHHHH
Confidence 46788777653 2333 55789999999999988776331 11 122344555444333 2 112222232
Q ss_pred --------hhhccCEEEEechh
Q 022363 147 --------TALKADLIVLNTAV 160 (298)
Q Consensus 147 --------~A~~aDLVIaNT~v 160 (298)
....+|.||.|..+
T Consensus 97 ~~~~~~~~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 97 SSAKKVKAEIGDVSILVNNAGV 118 (272)
T ss_dssp HHHHHHHHHTCCCSEEEECCCC
T ss_pred HHHHHHHHHCCCCcEEEECCCc
Confidence 12378999998765
No 199
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=52.13 E-value=30 Score=27.78 Aligned_cols=38 Identities=13% Similarity=-0.176 Sum_probs=29.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (298)
+--+++||+ +|-.--+.++++..|+.|.++..+++..+
T Consensus 88 ~d~~i~iS~----sG~t~~~~~~~~~ak~~g~~vi~IT~~~~ 125 (187)
T 3sho_A 88 TDLMIGVSV----WRYLRDTVAALAGAAERGVPTMALTDSSV 125 (187)
T ss_dssp TEEEEEECC----SSCCHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred CCEEEEEeC----CCCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 444555554 67777899999999999999999997654
No 200
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=52.12 E-value=53 Score=27.70 Aligned_cols=93 Identities=11% Similarity=-0.043 Sum_probs=50.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhcc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~a 151 (298)
|.+.+|-+|.++.+..--.-++-.+...+++.|+++.+...+... +.+-.....+.+ ...++
T Consensus 1 ~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~-~~~~~~~~i~~l-----------------~~~~v 62 (297)
T 3rot_A 1 MVRDKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAPPGAN-DVPKQVQFIESA-----------------LATYP 62 (297)
T ss_dssp --CCEEEEECSCCCSHHHHHHHHHHHHHHHHHTCEEEEECCSSSC-CHHHHHHHHHHH-----------------HHTCC
T ss_pred CceEEEEEEecCCCCchHHHHHHHHHHHHHHhCcEEEEECCCCcC-CHHHHHHHHHHH-----------------HHcCC
Confidence 456788888888754433334555667778889988877643210 011100111111 24678
Q ss_pred CEEEEechhc---hHHHHHHhhccCCCCCCceEEEeeec
Q 022363 152 DLIVLNTAVA---GKWLDAVLKEDVPRVLPNVLWWIHEM 187 (298)
Q Consensus 152 DLVIaNT~v~---g~wl~~l~~~~~p~~~~pVIWWIHE~ 187 (298)
|.||+...-. ...++++.+.++ |||.+=...
T Consensus 63 dgiii~~~~~~~~~~~~~~~~~~gi-----PvV~~~~~~ 96 (297)
T 3rot_A 63 SGIATTIPSDTAFSKSLQRANKLNI-----PVIAVDTRP 96 (297)
T ss_dssp SEEEECCCCSSTTHHHHHHHHHHTC-----CEEEESCCC
T ss_pred CEEEEeCCCHHHHHHHHHHHHHCCC-----CEEEEcCCC
Confidence 8888765432 456666665566 677654443
No 201
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=52.05 E-value=43 Score=29.24 Aligned_cols=49 Identities=12% Similarity=0.105 Sum_probs=28.8
Q ss_pred ccccCCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 61 RIATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 61 ~~~~~~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
+.+....+..-++||++|+.. -+|+.=+=.++|+.|.+.|+.|.++...
T Consensus 17 ~gp~sm~~~~~l~~k~vlVTG----asg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 17 QGPGSMRTGMLMEGKKGVIIG----VANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp ----CCCCCCTTTTCEEEEEC----CCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCccccchhccCCCEEEEEe----CCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 333333444557888777654 1221125568899999999998776633
No 202
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=52.01 E-value=35 Score=29.28 Aligned_cols=57 Identities=18% Similarity=0.205 Sum_probs=40.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeeh
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISA 139 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~-rgI~v~~~ 139 (298)
.+|+|++| |+-..-+|+|..|.+.|.+|.++........ ...+.+++++ +||++...
T Consensus 151 ~~~~v~Vv-------G~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~~~~~l~~~~gv~i~~~ 208 (325)
T 2q7v_A 151 KGKKVVVI-------GGGDAAVEEGMFLTKFADEVTVIHRRDTLRA---NKVAQARAFANPKMKFIWD 208 (325)
T ss_dssp TTCEEEEE-------CCSHHHHHHHHHHTTTCSEEEEECSSSSCCS---CHHHHHHHHTCTTEEEECS
T ss_pred CCCEEEEE-------CCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc---chHHHHHHHhcCCceEecC
Confidence 57888888 5556788999999999999999984432211 1235567765 48887754
No 203
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=52.01 E-value=41 Score=31.85 Aligned_cols=72 Identities=14% Similarity=0.290 Sum_probs=47.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhccC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~aD 152 (298)
+.|+|++|. +..+| |--+|++|++.|++|...=.+.. +..+++.+.|+++..-.... ...++|
T Consensus 17 ~~~~i~viG--~G~sG----~s~~A~~l~~~G~~V~~~D~~~~--------~~~~~l~~~gi~~~~g~~~~---~~~~a~ 79 (475)
T 1p3d_A 17 RVQQIHFIG--IGGAG----MSGIAEILLNEGYQISGSDIADG--------VVTQRLAQAGAKIYIGHAEE---HIEGAS 79 (475)
T ss_dssp TCCEEEEET--TTSTT----HHHHHHHHHHHTCEEEEEESCCS--------HHHHHHHHTTCEEEESCCGG---GGTTCS
T ss_pred cCCEEEEEe--ecHHH----HHHHHHHHHhCCCEEEEECCCCC--------HHHHHHHhCCCEEECCCCHH---HcCCCC
Confidence 357888885 34444 22378889999999886543221 23456777899997542222 235799
Q ss_pred EEEEechhc
Q 022363 153 LIVLNTAVA 161 (298)
Q Consensus 153 LVIaNT~v~ 161 (298)
+||....+.
T Consensus 80 ~vv~s~~i~ 88 (475)
T 1p3d_A 80 VVVVSSAIK 88 (475)
T ss_dssp EEEECTTSC
T ss_pred EEEECCCCC
Confidence 999998763
No 204
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=51.47 E-value=40 Score=32.26 Aligned_cols=84 Identities=21% Similarity=0.198 Sum_probs=58.3
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh---------chhHH
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK---------GQETI 145 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k---------~~~~i 145 (298)
+.|++++. +.+|=--+...||..+++.|..|.++...-- ....+.-|.......|++++... ..+.+
T Consensus 100 ~vI~ivG~--~GvGKTTla~~La~~l~~~G~kVllv~~D~~--r~~a~~qL~~~~~~~gv~v~~~~~~~~dp~~i~~~~l 175 (432)
T 2v3c_C 100 NVILLVGI--QGSGKTTTAAKLARYIQKRGLKPALIAADTY--RPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGM 175 (432)
T ss_dssp CCEEEECC--SSSSTTHHHHHHHHHHHHHHCCEEEECCSCC--CTTGGGSSHHHHHHSSCCEECCSSSCCSSSTTHHHHH
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEecccc--CchHHHHHHHhhhccCcceEecCCCCCCHHHHHHHHH
Confidence 57888885 7899999999999999999999988874321 11122234443344588887642 11344
Q ss_pred HhhhccCEEEEechhch
Q 022363 146 NTALKADLIVLNTAVAG 162 (298)
Q Consensus 146 ~~A~~aDLVIaNT~v~g 162 (298)
..+.++|+||+-|+-..
T Consensus 176 ~~~~~~D~vIIDT~G~~ 192 (432)
T 2v3c_C 176 EKFKKADVLIIDTAGRH 192 (432)
T ss_dssp HTTSSCSEEEEECCCSC
T ss_pred HHhhCCCEEEEcCCCCc
Confidence 45689999999998654
No 205
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=51.32 E-value=47 Score=24.65 Aligned_cols=65 Identities=17% Similarity=0.133 Sum_probs=39.1
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhC-CC-eEEEEeccCCCC---------chhhhhhhHHHHHHcCCceeeh
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV-GT-KVNWITIQKPSE---------EDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~-G~-~V~vL~~~~G~~---------~g~v~~~L~~kll~rgI~v~~~ 139 (298)
|-.+++++.-..+-....-+.+|.-+.+. |. +|.++...+|.. .+.-...+.+++.+.|++++--
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~~~~~~~~~~~~~~~~l~~l~~~gv~v~~C 78 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLC 78 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGGBSCCCCSSSCCHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHHhcCCCCCcCCCHHHHHHHHHHCCCEEEEe
Confidence 44555665544444445568888888888 99 998888665541 0111122334556668877754
No 206
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=51.10 E-value=27 Score=33.25 Aligned_cols=65 Identities=14% Similarity=0.137 Sum_probs=42.2
Q ss_pred HHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhccCEEEEechhc--hHHHHHHh
Q 022363 94 MELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLNTAVA--GKWLDAVL 169 (298)
Q Consensus 94 leLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~aDLVIaNT~v~--g~wl~~l~ 169 (298)
--+|++|++.|++|...=.+.. +..+++.+.|+++....... ...++|+||.+..+. .+.+.+..
T Consensus 26 sglA~~l~~~G~~V~g~D~~~~--------~~~~~L~~~gi~~~~g~~~~---~~~~~d~vV~spgi~~~~p~~~~a~ 92 (469)
T 1j6u_A 26 SAVALHEFSNGNDVYGSNIEET--------ERTAYLRKLGIPIFVPHSAD---NWYDPDLVIKTPAVRDDNPEIVRAR 92 (469)
T ss_dssp HHHHHHHHHTTCEEEEECSSCC--------HHHHHHHHTTCCEESSCCTT---SCCCCSEEEECTTCCTTCHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEcCCCC--------HHHHHHHhCCCEEECCCCHH---HCCCCCEEEECCCcCCCCHHHHHHH
Confidence 3459999999999886432221 22457778899998631111 124799999999974 44555444
No 207
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=50.95 E-value=18 Score=31.72 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=29.5
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~ 108 (298)
..+||+||+| .|.-.||+ -+.+.++.|++.|.+++
T Consensus 135 ~~~Gk~VLIV-DDvitTG~--Tl~~a~~~L~~~Ga~~v 169 (236)
T 1qb7_A 135 IGKGSRVVLI-DDVLATGG--TALSGLQLVEASDAVVV 169 (236)
T ss_dssp SCTTCEEEEE-EEEESSCH--HHHHHHHHHHHTTCEEE
T ss_pred CCCcCEEEEE-ecccccHH--HHHHHHHHHHHcCCeEE
Confidence 3589998887 77788898 67899999999999865
No 208
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=50.61 E-value=40 Score=33.28 Aligned_cols=39 Identities=13% Similarity=0.031 Sum_probs=30.4
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC
Q 022363 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK 114 (298)
Q Consensus 69 ~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~ 114 (298)
..+.+||++.+.. .|-....+++.|++.|.+|+.+....
T Consensus 330 ~~~l~GKrv~i~~-------~~~~~~~l~~~l~ElGm~vv~~~t~~ 368 (533)
T 1mio_A 330 KEKLQGKTACLYV-------GGSRSHTYMNMLKSFGVDSLVAGFEF 368 (533)
T ss_dssp HHHHTTCEEEEEE-------SSSHHHHHHHHHHHHTCEEEEEEESS
T ss_pred HHHhCCCEEEEEC-------CchHHHHHHHHHHHCCCEEEEEEecc
Confidence 3577999999854 33467889999999999999887443
No 209
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=50.33 E-value=87 Score=26.23 Aligned_cols=76 Identities=17% Similarity=0.260 Sum_probs=43.3
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
|+||++|+.. -+|+ +=.++++.|.+.|++|.++..+..+ .+++++.+.|.++. +-...++++
T Consensus 5 l~~k~vlVTG----as~g--IG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 71 (249)
T 2ew8_A 5 LKDKLAVITG----GANG--IGRAIAERFAVEGADIAIADLVPAP-------EAEAAIRNLGRRVLTVKCDVSQPGDVEA 71 (249)
T ss_dssp TTTCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEESSCCH-------HHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeC----CCcH--HHHHHHHHHHHCCCEEEEEcCCchh-------HHHHHHHhcCCcEEEEEeecCCHHHHHH
Confidence 5678666542 2222 5568899999999998887643211 23344444443322 112222332
Q ss_pred -------hhhccCEEEEechh
Q 022363 147 -------TALKADLIVLNTAV 160 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v 160 (298)
....+|.+|.|..+
T Consensus 72 ~~~~~~~~~g~id~lv~nAg~ 92 (249)
T 2ew8_A 72 FGKQVISTFGRCDILVNNAGI 92 (249)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 13479999999865
No 210
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=49.99 E-value=34 Score=28.79 Aligned_cols=39 Identities=23% Similarity=0.209 Sum_probs=25.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK 114 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~ 114 (298)
++||++|+.. -+|+.=+=.++|+.|.+.|+.|.++..+.
T Consensus 18 l~~k~vlITG----as~~~giG~~~a~~l~~~G~~v~~~~~~~ 56 (267)
T 3gdg_A 18 LKGKVVVVTG----ASGPKGMGIEAARGCAEMGAAVAITYASR 56 (267)
T ss_dssp CTTCEEEETT----CCSSSSHHHHHHHHHHHTSCEEEECBSSS
T ss_pred cCCCEEEEEC----CCCCCChHHHHHHHHHHCCCeEEEEeCCc
Confidence 5778666532 11001355689999999999998887544
No 211
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=49.92 E-value=24 Score=32.58 Aligned_cols=42 Identities=19% Similarity=0.254 Sum_probs=33.1
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (298)
-++||+||+| .|.-.||+ -|.+.++.|++.|...+.+..-+|
T Consensus 214 ~v~gk~VlLV-DDiitTG~--Tl~~aa~~Lk~~Ga~~V~~~~tH~ 255 (317)
T 1dku_A 214 NIEGKTAILI-DDIIDTAG--TITLAANALVENGAKEVYACCTHP 255 (317)
T ss_dssp CCTTCEEEEE-CSEESSCH--HHHHHHHHHHHTTCSEEEEECSEE
T ss_pred cCCCCEEEEE-ecccCCCH--HHHHHHHHHHHcCCcEEEEEEECc
Confidence 4789988877 77778999 677999999999998666665443
No 212
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=49.83 E-value=61 Score=28.03 Aligned_cols=74 Identities=16% Similarity=0.198 Sum_probs=38.9
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchh
Q 022363 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQE 143 (298)
Q Consensus 66 ~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~ 143 (298)
+++..-.++|+||+.+ -|| -+=-++++.|.+.|++|..+...... .++..+.. ....
T Consensus 11 ~~~~~~~~~~~vlVtG----atG--~iG~~l~~~L~~~G~~V~~~~r~~~~---------------~~~~~~~~Dl~d~~ 69 (347)
T 4id9_A 11 SSGLVPRGSHMILVTG----SAG--RVGRAVVAALRTQGRTVRGFDLRPSG---------------TGGEEVVGSLEDGQ 69 (347)
T ss_dssp ----------CEEEET----TTS--HHHHHHHHHHHHTTCCEEEEESSCCS---------------SCCSEEESCTTCHH
T ss_pred CCcccccCCCEEEEEC----CCC--hHHHHHHHHHHhCCCEEEEEeCCCCC---------------CCccEEecCcCCHH
Confidence 4555666778887752 233 35668889999999999998754321 23333311 2233
Q ss_pred HHH-hhhccCEEEEechh
Q 022363 144 TIN-TALKADLIVLNTAV 160 (298)
Q Consensus 144 ~i~-~A~~aDLVIaNT~v 160 (298)
.+. ...++|.||-+...
T Consensus 70 ~~~~~~~~~d~vih~A~~ 87 (347)
T 4id9_A 70 ALSDAIMGVSAVLHLGAF 87 (347)
T ss_dssp HHHHHHTTCSEEEECCCC
T ss_pred HHHHHHhCCCEEEECCcc
Confidence 343 45588998876543
No 213
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=49.74 E-value=58 Score=24.74 Aligned_cols=71 Identities=11% Similarity=0.081 Sum_probs=45.4
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHHh--h
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETINT--A 148 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~~--A 148 (298)
++++|++++- +. +=..+|+.|.+.|++|.++-.. + .-.+++.+.|+.++.- ...+.+.. .
T Consensus 5 ~~~~v~I~G~--G~-----iG~~la~~L~~~g~~V~~id~~-~--------~~~~~~~~~~~~~~~gd~~~~~~l~~~~~ 68 (141)
T 3llv_A 5 GRYEYIVIGS--EA-----AGVGLVRELTAAGKKVLAVDKS-K--------EKIELLEDEGFDAVIADPTDESFYRSLDL 68 (141)
T ss_dssp -CCSEEEECC--SH-----HHHHHHHHHHHTTCCEEEEESC-H--------HHHHHHHHTTCEEEECCTTCHHHHHHSCC
T ss_pred CCCEEEEECC--CH-----HHHHHHHHHHHCCCeEEEEECC-H--------HHHHHHHHCCCcEEECCCCCHHHHHhCCc
Confidence 3567888862 32 4457889999999999887632 1 1235566678776632 33334443 3
Q ss_pred hccCEEEEech
Q 022363 149 LKADLIVLNTA 159 (298)
Q Consensus 149 ~~aDLVIaNT~ 159 (298)
.++|.||+.|-
T Consensus 69 ~~~d~vi~~~~ 79 (141)
T 3llv_A 69 EGVSAVLITGS 79 (141)
T ss_dssp TTCSEEEECCS
T ss_pred ccCCEEEEecC
Confidence 58999998775
No 214
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=49.55 E-value=29 Score=29.55 Aligned_cols=43 Identities=16% Similarity=0.165 Sum_probs=24.6
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC
Q 022363 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK 114 (298)
Q Consensus 66 ~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~ 114 (298)
+.|-..+++|.+|+.. |+-=+=.++|+.|.+.|+.|.++..+.
T Consensus 17 ~~p~~~~~~k~vlITG------as~gIG~~~a~~l~~~G~~v~~~~~~~ 59 (269)
T 3gk3_A 17 QGPGSMQAKRVAFVTG------GMGGLGAAISRRLHDAGMAVAVSHSER 59 (269)
T ss_dssp -------CCCEEEETT------TTSHHHHHHHHHHHTTTCEEEEEECSC
T ss_pred CCchhhhcCCEEEEEC------CCchHHHHHHHHHHHCCCEEEEEcCCc
Confidence 3455556777655421 223355789999999999998876443
No 215
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=49.30 E-value=1.2e+02 Score=26.26 Aligned_cols=82 Identities=12% Similarity=0.114 Sum_probs=46.1
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee---h-hchhHH
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS---A-KGQETI 145 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~---~-k~~~~i 145 (298)
.-++||++|+.. -+| =+=.++|+.|.+.|++|+++..+.. .....+.+.+.+.|..+.. | ....++
T Consensus 43 ~~l~gk~vlVTG----as~--GIG~aia~~la~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 112 (291)
T 3ijr_A 43 EKLKGKNVLITG----GDS--GIGRAVSIAFAKEGANIAIAYLDEE----GDANETKQYVEKEGVKCVLLPGDLSDEQHC 112 (291)
T ss_dssp STTTTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHTTTCCEEEEESCTTSHHHH
T ss_pred cCCCCCEEEEeC----CCc--HHHHHHHHHHHHCCCEEEEEeCCch----HHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence 346788777653 222 3557899999999999887774421 1111223334444544331 1 222222
Q ss_pred H--------hhhccCEEEEechhc
Q 022363 146 N--------TALKADLIVLNTAVA 161 (298)
Q Consensus 146 ~--------~A~~aDLVIaNT~v~ 161 (298)
+ .....|.+|.|....
T Consensus 113 ~~~~~~~~~~~g~iD~lvnnAg~~ 136 (291)
T 3ijr_A 113 KDIVQETVRQLGSLNILVNNVAQQ 136 (291)
T ss_dssp HHHHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCc
Confidence 2 234799999997653
No 216
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=48.80 E-value=15 Score=33.40 Aligned_cols=38 Identities=21% Similarity=0.249 Sum_probs=28.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
..+||+++. ...|-=.-++.||+.|++.|++|.+++..
T Consensus 20 ~mrIl~~~~--~~~GHv~p~l~la~~L~~~GheV~~~~~~ 57 (441)
T 2yjn_A 20 HMRVVFSSM--ASKSHLFGLVPLAWAFRAAGHEVRVVASP 57 (441)
T ss_dssp CCEEEEECC--SCHHHHTTTHHHHHHHHHTTCEEEEEECG
T ss_pred ccEEEEEcC--CCcchHhHHHHHHHHHHHCCCeEEEEeCc
Confidence 357998854 22244445789999999999999999843
No 217
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=48.66 E-value=41 Score=31.99 Aligned_cols=59 Identities=20% Similarity=0.338 Sum_probs=43.8
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC--CCCchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK--PSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~--G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
.|++++| |+-..-+|+|..|++.|.+|.++.... +..+.++...+.+.+.++||++...
T Consensus 210 ~~~vvVI-------GgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~GV~v~~~ 270 (519)
T 3qfa_A 210 PGKTLVV-------GASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQ 270 (519)
T ss_dssp CCSEEEE-------CCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEES
T ss_pred CCeEEEE-------CCcHHHHHHHHHHHHcCCeEEEEecccccccCCHHHHHHHHHHHHHCCCEEEeC
Confidence 3557777 455577899999999999999997421 1234667677888888899998754
No 218
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=48.58 E-value=38 Score=31.72 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=27.5
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
.|.||+|+++. |+++- .+++..+++.|++|+++.
T Consensus 32 ~~~~~~IlIlG------~G~lg-~~~~~aa~~lG~~v~v~d 65 (419)
T 4e4t_A 32 ILPGAWLGMVG------GGQLG-RMFCFAAQSMGYRVAVLD 65 (419)
T ss_dssp CCTTCEEEEEC------CSHHH-HHHHHHHHHTTCEEEEEC
T ss_pred CCCCCEEEEEC------CCHHH-HHHHHHHHHCCCEEEEEC
Confidence 57899999996 56654 458889999999998875
No 219
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=48.52 E-value=65 Score=26.55 Aligned_cols=35 Identities=11% Similarity=0.226 Sum_probs=24.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
+++|++|+.. -+|+ +=.++++.|.+.|++|.++..
T Consensus 9 ~~~k~vlITG----asgg--iG~~la~~l~~~G~~V~~~~r 43 (254)
T 2wsb_A 9 LDGACAAVTG----AGSG--IGLEICRAFAASGARLILIDR 43 (254)
T ss_dssp CTTCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC----CCcH--HHHHHHHHHHHCCCEEEEEeC
Confidence 5677766542 2332 557899999999999887763
No 220
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=48.45 E-value=82 Score=26.45 Aligned_cols=81 Identities=19% Similarity=0.210 Sum_probs=44.7
Q ss_pred ccccccccEEEEEeccCCCCCch--HHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcC---Ccee--ehh
Q 022363 68 PLSFMKSKLVLLVSHELSLSGGP--LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRG---VQVI--SAK 140 (298)
Q Consensus 68 ~~~f~~~KkILLISHELS~TGAP--LlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rg---I~v~--~~k 140 (298)
+..-+++|++|+ |||- =+=.++|+.|.+.|+.|.++..... . ...+.+++.+.+ +..+ +-.
T Consensus 16 ~~~~l~~k~vlI-------TGasg~GIG~~~a~~l~~~G~~V~~~~r~~~----~-~~~~~~~l~~~~~~~~~~~~~Dl~ 83 (266)
T 3o38_A 16 GHGLLKGKVVLV-------TAAAGTGIGSTTARRALLEGADVVISDYHER----R-LGETRDQLADLGLGRVEAVVCDVT 83 (266)
T ss_dssp CCSTTTTCEEEE-------SSCSSSSHHHHHHHHHHHTTCEEEEEESCHH----H-HHHHHHHHHTTCSSCEEEEECCTT
T ss_pred cccCCCCCEEEE-------ECCCCCchHHHHHHHHHHCCCEEEEecCCHH----H-HHHHHHHHHhcCCCceEEEEeCCC
Confidence 344478887766 3331 2556899999999999877763321 1 112334443332 2222 112
Q ss_pred chhHHH--------hhhccCEEEEechh
Q 022363 141 GQETIN--------TALKADLIVLNTAV 160 (298)
Q Consensus 141 ~~~~i~--------~A~~aDLVIaNT~v 160 (298)
..++++ ....+|.+|.|..+
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 84 STEAVDALITQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEECCCc
Confidence 222222 23478999999875
No 221
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=48.28 E-value=20 Score=29.64 Aligned_cols=35 Identities=17% Similarity=0.121 Sum_probs=28.5
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~ 108 (298)
-.+||+||+| .|.=.||+ -|.+.++.|++.|...+
T Consensus 92 ~~~gk~VllV-DDvi~TG~--Tl~~a~~~L~~~ga~~v 126 (183)
T 1hgx_A 92 NIEGRHVLVV-EDIIDTGL--TMYQLLNNLQMRKPASL 126 (183)
T ss_dssp CCTTSEEEEE-EEEESSSH--HHHHHHHHHHTTCCSEE
T ss_pred CCCCCEEEEE-CCccCCHH--HHHHHHHHHHhcCCCEE
Confidence 3789998877 77778998 67789999999988643
No 222
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=48.15 E-value=91 Score=27.21 Aligned_cols=74 Identities=24% Similarity=0.302 Sum_probs=44.5
Q ss_pred ccccEE-EEEeccCCCCCchHHHHHHHHHHHhCC--CeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--h---c--
Q 022363 72 MKSKLV-LLVSHELSLSGGPLLLMELAFLLRGVG--TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--K---G-- 141 (298)
Q Consensus 72 ~~~KkI-LLISHELS~TGAPLlLleLA~~Lkq~G--~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k---~-- 141 (298)
|..++| +|+| |.+--|-.+...+++.+ ++|+.+.+++++.. + .+...+.|||++.- + .
T Consensus 5 m~~~ri~vl~S------G~gsnl~all~~~~~~~l~~~I~~Visn~~~a~-----~-l~~A~~~gIp~~~~~~~~~~~r~ 72 (209)
T 4ds3_A 5 MKRNRVVIFIS------GGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAG-----G-LAKAEAAGIATQVFKRKDFASKE 72 (209)
T ss_dssp -CCEEEEEEES------SCCHHHHHHHHHHTSTTCSEEEEEEEESCTTCT-----H-HHHHHHTTCCEEECCGGGSSSHH
T ss_pred CCCccEEEEEE------CCcHHHHHHHHHHHcCCCCcEEEEEEECCcccH-----H-HHHHHHcCCCEEEeCccccCCHH
Confidence 444444 5655 44557778888887653 67887776554321 2 35677889999842 1 1
Q ss_pred --hhHH-H--hhhccCEEEEe
Q 022363 142 --QETI-N--TALKADLIVLN 157 (298)
Q Consensus 142 --~~~i-~--~A~~aDLVIaN 157 (298)
.+++ + ...++|+|++-
T Consensus 73 ~~d~~~~~~l~~~~~Dliv~a 93 (209)
T 4ds3_A 73 AHEDAILAALDVLKPDIICLA 93 (209)
T ss_dssp HHHHHHHHHHHHHCCSEEEES
T ss_pred HHHHHHHHHHHhcCCCEEEEe
Confidence 1222 2 35689999874
No 223
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=47.96 E-value=94 Score=25.85 Aligned_cols=42 Identities=10% Similarity=-0.107 Sum_probs=25.0
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCC---CeEEEEecc
Q 022363 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG---TKVNWITIQ 113 (298)
Q Consensus 66 ~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G---~~V~vL~~~ 113 (298)
+.+...+++|+||+.. -+| -+=.++++.|.+.| ++|.++...
T Consensus 13 ~~~~~~~~~k~vlITG----asg--gIG~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 13 GLVPRGSHMNSILITG----CNR--GLGLGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp -------CCSEEEESC----CSS--HHHHHHHHHHHTSSSCCSEEEEEESC
T ss_pred cccccCCCCCEEEEEC----CCC--cHHHHHHHHHHhcCCCCcEEEEEecC
Confidence 4566678888776642 222 25578999999999 888877744
No 224
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=47.79 E-value=1e+02 Score=26.00 Aligned_cols=80 Identities=10% Similarity=0.152 Sum_probs=43.9
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCch--hhhhhhHHHHHHcCCceeeh--hchhHHH-hh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEED--EVIYSLEHKMWDRGVQVISA--KGQETIN-TA 148 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g--~v~~~L~~kll~rgI~v~~~--k~~~~i~-~A 148 (298)
+|+||+++ -||. +=-++++.|.+.|++|.++......... +-... .+++...|+.++.. ....++. .+
T Consensus 2 ~~~vlVtG----atG~--iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~~~v~~v~~D~~d~~~l~~~~ 74 (307)
T 2gas_A 2 ENKILILG----PTGA--IGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQSLGVILLEGDINDHETLVKAI 74 (307)
T ss_dssp CCCEEEES----TTST--THHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred CcEEEEEC----CCch--HHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHhCCCEEEEeCCCCHHHHHHHH
Confidence 35566553 2332 3345677788889999888754311100 11011 12344568877632 3334554 45
Q ss_pred hccCEEEEechh
Q 022363 149 LKADLIVLNTAV 160 (298)
Q Consensus 149 ~~aDLVIaNT~v 160 (298)
.++|.||.|+..
T Consensus 75 ~~~d~vi~~a~~ 86 (307)
T 2gas_A 75 KQVDIVICAAGR 86 (307)
T ss_dssp TTCSEEEECSSS
T ss_pred hCCCEEEECCcc
Confidence 689999988753
No 225
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=47.67 E-value=51 Score=28.78 Aligned_cols=79 Identities=20% Similarity=0.217 Sum_probs=44.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCcee--ehhchhHHH-h
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVI--SAKGQETIN-T 147 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~r-gI~v~--~~k~~~~i~-~ 147 (298)
++||++|++. -+|+ +=..+++.|.+.|.+|.+ +++..+ . ...+.+++... ++.++ +-....++. .
T Consensus 117 l~gk~vlVtG----aaGG--iG~aia~~L~~~G~~V~i-~~R~~~---~-~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~ 185 (287)
T 1lu9_A 117 VKGKKAVVLA----GTGP--VGMRSAALLAGEGAEVVL-CGRKLD---K-AQAAADSVNKRFKVNVTAAETADDASRAEA 185 (287)
T ss_dssp CTTCEEEEET----CSSH--HHHHHHHHHHHTTCEEEE-EESSHH---H-HHHHHHHHHHHHTCCCEEEECCSHHHHHHH
T ss_pred CCCCEEEEEC----CCcH--HHHHHHHHHHHCcCEEEE-EECCHH---H-HHHHHHHHHhcCCcEEEEecCCCHHHHHHH
Confidence 5788888763 2333 556788889999999554 444321 1 11233333321 33333 222233443 4
Q ss_pred hhccCEEEEechhc
Q 022363 148 ALKADLIVLNTAVA 161 (298)
Q Consensus 148 A~~aDLVIaNT~v~ 161 (298)
..++|+||.||.+.
T Consensus 186 ~~~~DvlVn~ag~g 199 (287)
T 1lu9_A 186 VKGAHFVFTAGAIG 199 (287)
T ss_dssp TTTCSEEEECCCTT
T ss_pred HHhCCEEEECCCcc
Confidence 55789999999653
No 226
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=47.38 E-value=52 Score=30.42 Aligned_cols=80 Identities=20% Similarity=0.372 Sum_probs=54.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccC---CCCchhhhhhhHHHHHHcCCceeehhchhH------
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQK---PSEEDEVIYSLEHKMWDRGVQVISAKGQET------ 144 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~---G~~~g~v~~~L~~kll~rgI~v~~~k~~~~------ 144 (298)
+|++++| |+-..-+|+|..|.+.|.+|.++.... +..+.++...+.+.+.++|+++........
T Consensus 170 ~~~v~Vi-------GgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~ 242 (463)
T 4dna_A 170 PESILIA-------GGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADAD 242 (463)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC
Confidence 6788887 344466899999999999999987443 223566667788888889998876421111
Q ss_pred ----HH-hh---hccCEEEEechh
Q 022363 145 ----IN-TA---LKADLIVLNTAV 160 (298)
Q Consensus 145 ----i~-~A---~~aDLVIaNT~v 160 (298)
+. +. ..+|.||..|-.
T Consensus 243 ~~~~v~~~~~g~i~aD~Vv~a~G~ 266 (463)
T 4dna_A 243 GRRVATTMKHGEIVADQVMLALGR 266 (463)
T ss_dssp SCEEEEESSSCEEEESEEEECSCE
T ss_pred CEEEEEEcCCCeEEeCEEEEeeCc
Confidence 11 11 358888887654
No 227
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=47.34 E-value=83 Score=27.27 Aligned_cols=81 Identities=17% Similarity=0.222 Sum_probs=46.0
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhC--CCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee--ehh---ch----h
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI--SAK---GQ----E 143 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~--G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~--~~k---~~----~ 143 (298)
|..+|+|...+ .|-.|....++. +++++.+..+.+.. .-.+...+.|||++ ..+ .. +
T Consensus 2 riaVl~SG~Gs------~L~aLi~~~~~~~~~~~I~~Vvs~~~~~------~~~~~A~~~gIp~~~~~~~~~~~r~~~~~ 69 (209)
T 1meo_A 2 RVAVLISGTGS------NLQALIDSTREPNSSAQIDIVISNKAAV------AGLDKAERAGIPTRVINHKLYKNRVEFDS 69 (209)
T ss_dssp EEEEEESSSCT------THHHHHHHHHSTTCSCEEEEEEESSTTC------HHHHHHHHTTCCEEECCGGGSSSHHHHHH
T ss_pred eEEEEEECCch------HHHHHHHHHhcCCCCcEEEEEEeCCCCh------HHHHHHHHcCCCEEEECccccCchhhhhH
Confidence 45677775543 344455555553 68888777665432 12467788899997 221 11 2
Q ss_pred HH-H--hhhccCEEEEec---hhchHHHHH
Q 022363 144 TI-N--TALKADLIVLNT---AVAGKWLDA 167 (298)
Q Consensus 144 ~i-~--~A~~aDLVIaNT---~v~g~wl~~ 167 (298)
++ + ...++|+|++-. ++....++.
T Consensus 70 ~~~~~l~~~~~Dliv~a~y~~il~~~~l~~ 99 (209)
T 1meo_A 70 AIDLVLEEFSIDIVCLAGFMRILSGPFVQK 99 (209)
T ss_dssp HHHHHHHHTTCCEEEEESCCSCCCHHHHHH
T ss_pred HHHHHHHhcCCCEEEEcchhhhCCHHHHhh
Confidence 22 2 245899998754 444445543
No 228
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=47.32 E-value=86 Score=26.15 Aligned_cols=41 Identities=15% Similarity=-0.001 Sum_probs=27.4
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
++++|-++..+.+..--.-++-.+-..+++.|+++.+....
T Consensus 7 ~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 47 (291)
T 3egc_A 7 RSNVVGLIVSDIENVFFAEVASGVESEARHKGYSVLLANTA 47 (291)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCcEEEEEECCCcchHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45678788777554333345556667888889998877643
No 229
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=47.27 E-value=39 Score=28.92 Aligned_cols=88 Identities=13% Similarity=0.098 Sum_probs=47.4
Q ss_pred cEEEEEe-ccCCCCCchHHHHHHHHHHHhCCCeEEEEe-ccCCCCchhhhhhhHHHHHHcCCceeehhchhHHH--hhhc
Q 022363 75 KLVLLVS-HELSLSGGPLLLMELAFLLRGVGTKVNWIT-IQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETIN--TALK 150 (298)
Q Consensus 75 KkILLIS-HELS~TGAPLlLleLA~~Lkq~G~~V~vL~-~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~--~A~~ 150 (298)
++||||. ++--| .|+.=.=+-.++.+.|..+.+-. +-.+..++.+-+.-.+-+.++||..- .+ -+++. ....
T Consensus 35 ~~VLFVC~gNiCR--SpmAEai~r~~~~~~g~~~~v~SAGt~~~~G~~~dp~a~~vl~e~Gidis-hr-ar~lt~~d~~~ 110 (184)
T 4etn_A 35 MDIIFVCTGNTSR--SPMAEALFKSIAEREGLNVNVRSAGVFASPNGKATPHAVEALFEKHIALN-HV-SSPLTEELMES 110 (184)
T ss_dssp EEEEEEESSSSSH--HHHHHHHHHHHHHHHTCCEEEEEEETTCCTTCBCCHHHHHHHHHTTCCCC-CB-CCBCCHHHHHH
T ss_pred CEEEEECCCchhH--HHHHHHHHHHHHHhcCCcEEEEeeecCCcCCCCCCHHHHHHHHHcCCCch-hc-cCcCCHHHcCC
Confidence 5899995 44444 35443333345555565665555 32221222333344566777799876 32 22232 3578
Q ss_pred cCEEEEechhchHHHH
Q 022363 151 ADLIVLNTAVAGKWLD 166 (298)
Q Consensus 151 aDLVIaNT~v~g~wl~ 166 (298)
||+||+=+--....+.
T Consensus 111 ~DlIltMd~~~~~~l~ 126 (184)
T 4etn_A 111 ADLVLAMTHQHKQIIA 126 (184)
T ss_dssp CSEEEESSHHHHHHHH
T ss_pred CCEEEEcCcHHHHHHH
Confidence 9999986653333333
No 230
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=47.20 E-value=1.2e+02 Score=25.01 Aligned_cols=79 Identities=10% Similarity=0.212 Sum_probs=44.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--e--ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--I--SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v--~--~~k~~~~i~- 146 (298)
+++|+||+. +-+|+ +=.++++.|.+.|++|.++..... . ...+.+++...+.++ + +-....+++
T Consensus 11 l~~k~vlIt----Gasgg--iG~~la~~l~~~G~~V~~~~r~~~----~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~ 79 (260)
T 3awd_A 11 LDNRVAIVT----GGAQN--IGLACVTALAEAGARVIIADLDEA----M-ATKAVEDLRMEGHDVSSVVMDVTNTESVQN 79 (260)
T ss_dssp CTTCEEEEE----TTTSH--HHHHHHHHHHHTTCEEEEEESCHH----H-HHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEe----CCCch--HHHHHHHHHHHCCCEEEEEeCCHH----H-HHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence 567776664 22333 567899999999999888763321 1 112334454444332 2 112223332
Q ss_pred -------hhhccCEEEEechhc
Q 022363 147 -------TALKADLIVLNTAVA 161 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v~ 161 (298)
....+|.||.|..+.
T Consensus 80 ~~~~~~~~~~~id~vi~~Ag~~ 101 (260)
T 3awd_A 80 AVRSVHEQEGRVDILVACAGIC 101 (260)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 123789999997653
No 231
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=47.20 E-value=26 Score=32.09 Aligned_cols=39 Identities=23% Similarity=0.384 Sum_probs=31.3
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
-++||++|+| .|.=.||+ -+.+.++.|++.|...+....
T Consensus 200 dv~gk~vliV-DDii~TG~--Tl~~a~~~L~~~Ga~~v~~~~ 238 (286)
T 3lrt_A 200 DVNGKKLLIV-DDIISTGG--TIAKSSGLLREKGASKIYVSA 238 (286)
T ss_dssp CCTTCEEEEE-EEEESSCH--HHHHHHHHHHHTTCSEEEEEE
T ss_pred cCCcCEEEEE-eccccccH--HHHHHHHHHHhCCCCEEEEEE
Confidence 3699998888 67777888 578999999999998665554
No 232
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=47.04 E-value=85 Score=30.26 Aligned_cols=85 Identities=22% Similarity=0.244 Sum_probs=55.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc--------hhH
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--------QET 144 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~--------~~~ 144 (298)
+++.|++++. +.+|=--++..||.+|++.|..|.++...-. ....+.-|...-...|++++.... ...
T Consensus 96 ~~~vI~lvG~--~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~--r~~a~eqL~~~~~~~gv~~~~~~~~~dp~~i~~~a 171 (433)
T 3kl4_A 96 LPFIIMLVGV--QGSGKTTTAGKLAYFYKKRGYKVGLVAADVY--RPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKG 171 (433)
T ss_dssp SSEEEEECCC--TTSCHHHHHHHHHHHHHHTTCCEEEEEECCS--CHHHHHHHHHHHHTTTCCEECCTTCSCHHHHHHHH
T ss_pred CCeEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEecCcc--chhHHHHHHHHHHhcCCceeeccccCCHHHHHHHH
Confidence 3566677765 7889999999999999999999999884422 111112222222333888775311 123
Q ss_pred HHhhh--ccCEEEEechhc
Q 022363 145 INTAL--KADLIVLNTAVA 161 (298)
Q Consensus 145 i~~A~--~aDLVIaNT~v~ 161 (298)
+..+. ++|+||+-|+--
T Consensus 172 l~~a~~~~~DvvIIDTaGr 190 (433)
T 3kl4_A 172 VDIFVKNKMDIIIVDTAGR 190 (433)
T ss_dssp HHHTTTTTCSEEEEEECCC
T ss_pred HHHHHhcCCCEEEEECCCC
Confidence 44443 899999999954
No 233
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=46.96 E-value=55 Score=27.58 Aligned_cols=59 Identities=15% Similarity=0.219 Sum_probs=41.6
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
..++|++++| |+-..-+|+|..|++.|.+|.++.....-... ....+++.++||.+...
T Consensus 151 ~~~~~~v~vv-------G~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~---~~~~~~l~~~gv~~~~~ 209 (332)
T 3lzw_A 151 KFAGRRVAIL-------GGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH---EHSVENLHASKVNVLTP 209 (332)
T ss_dssp GGBTCEEEEE-------CSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC---HHHHHHHHHSSCEEETT
T ss_pred HcCCCEEEEE-------CCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc---HHHHHHHhcCCeEEEeC
Confidence 3468899988 44456789999999999999988744321111 13356688889988764
No 234
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=46.80 E-value=65 Score=30.51 Aligned_cols=81 Identities=15% Similarity=0.086 Sum_probs=48.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhcc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~a 151 (298)
.+|++|.+|.. .|+ +.-.++..+...|.+|.+.+-++=...+++...+.+...+.|..+......+ +...++
T Consensus 177 l~glkva~vGD-~~n-----va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~--eav~~a 248 (340)
T 4ep1_A 177 FKGIKLAYVGD-GNN-----VCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPE--LAVNEA 248 (340)
T ss_dssp CTTCEEEEESC-CCH-----HHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHH--HHHTTC
T ss_pred CCCCEEEEECC-Cch-----hHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHH--HHhCCC
Confidence 68999999985 444 4445555555559999998843322334443333333345675543221111 246799
Q ss_pred CEEEEechh
Q 022363 152 DLIVLNTAV 160 (298)
Q Consensus 152 DLVIaNT~v 160 (298)
|.|+.-+..
T Consensus 249 DVvyt~~w~ 257 (340)
T 4ep1_A 249 DFIYTDVWM 257 (340)
T ss_dssp SEEEECCC-
T ss_pred CEEEecCcc
Confidence 999997764
No 235
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=46.67 E-value=38 Score=28.99 Aligned_cols=58 Identities=22% Similarity=0.279 Sum_probs=39.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHH-HcCCceeeh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW-DRGVQVISA 139 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll-~rgI~v~~~ 139 (298)
..+|+|++| |+-..-+|+|..|.+.|.+|.++......... ..+.++++ ++||++...
T Consensus 157 ~~~~~v~Vv-------G~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~---~~~~~~~~~~~gv~i~~~ 215 (333)
T 1vdc_A 157 FRNKPLAVI-------GGGDSAMEEANFLTKYGSKVYIIHRRDAFRAS---KIMQQRALSNPKIDVIWN 215 (333)
T ss_dssp GTTSEEEEE-------CCSHHHHHHHHHHTTTSSEEEEECSSSSCCSC---HHHHHHHHTCTTEEEECS
T ss_pred cCCCeEEEE-------CCChHHHHHHHHHHhcCCeEEEEecCCcCCcc---HHHHHHHHhCCCeeEecC
Confidence 467889888 55567899999999999999998744321111 23444554 568887643
No 236
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=46.61 E-value=1.4e+02 Score=25.71 Aligned_cols=83 Identities=14% Similarity=0.210 Sum_probs=46.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchh---hhhhhHHHHHHcCCceee----hhchhH
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDE---VIYSLEHKMWDRGVQVIS----AKGQET 144 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~---v~~~L~~kll~rgI~v~~----~k~~~~ 144 (298)
+++|.+|+.. -+| =+=.++|+.|.+.|++|.++...... ..+ -...+.+++...|..+.. -...++
T Consensus 7 l~~k~vlVTG----as~--GIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 79 (285)
T 3sc4_A 7 LRGKTMFISG----GSR--GIGLAIAKRVAADGANVALVAKSAEP-HPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDA 79 (285)
T ss_dssp CTTCEEEEES----CSS--HHHHHHHHHHHTTTCEEEEEESCCSC-CSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHH
T ss_pred CCCCEEEEEC----CCC--HHHHHHHHHHHHCCCEEEEEECChhh-hhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence 5777666643 222 25568999999999998887744321 111 112234455555544331 122222
Q ss_pred HH--------hhhccCEEEEechhc
Q 022363 145 IN--------TALKADLIVLNTAVA 161 (298)
Q Consensus 145 i~--------~A~~aDLVIaNT~v~ 161 (298)
++ .....|.+|.|..+.
T Consensus 80 v~~~~~~~~~~~g~id~lvnnAg~~ 104 (285)
T 3sc4_A 80 VAAAVAKTVEQFGGIDICVNNASAI 104 (285)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 22 234899999997653
No 237
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=46.43 E-value=22 Score=29.60 Aligned_cols=35 Identities=29% Similarity=0.178 Sum_probs=28.9
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~ 108 (298)
-.+||+||+| .|.=.||+ -|.+.++.|++.|...+
T Consensus 95 ~~~gk~VllV-DDvi~TG~--Tl~~a~~~L~~~Ga~~V 129 (185)
T 2geb_A 95 DIEGKDVLIV-EDIIDSGL--TLAYLRETLLGRKPRSL 129 (185)
T ss_dssp CCTTSEEEEE-EEEESSCH--HHHHHHHHHHTTCCSEE
T ss_pred CCCCCEEEEE-CCccCCHH--HHHHHHHHHHhcCCCEE
Confidence 4689999887 78888998 67789999999988744
No 238
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=46.40 E-value=66 Score=25.12 Aligned_cols=93 Identities=16% Similarity=0.000 Sum_probs=44.8
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCC-c-h-------hhhhhhHHHHHHcCCce
Q 022363 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSE-E-D-------EVIYSLEHKMWDRGVQV 136 (298)
Q Consensus 66 ~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~-~-g-------~v~~~L~~kll~rgI~v 136 (298)
+++.+-|.-|+||+-...-|- .+.-++-..+.+.+..|.++.++.-..++. . . +....+.+.+.+.|+++
T Consensus 16 ~~~~~~mm~~~ILv~vD~~s~-~s~~al~~A~~la~~~~a~l~llhV~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~ 94 (155)
T 3dlo_A 16 NLYFQGMIYMPIVVAVDKKSD-RAERVLRFAAEEARLRGVPVYVVHSLPGGGRTKDEDIIEAKETLSWAVSIIRKEGAEG 94 (155)
T ss_dssp ------CCCCCEEEECCSSSH-HHHHHHHHHHHHHHHHTCCEEEEEEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCcccccccCeEEEEECCCCH-HHHHHHHHHHHHHHhcCCEEEEEEEEcCCCcccHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 345555667777776633022 233344444455566688998888443321 0 1 11122333444457664
Q ss_pred eeh------hchhHH-Hhhh--ccCEEEEech
Q 022363 137 ISA------KGQETI-NTAL--KADLIVLNTA 159 (298)
Q Consensus 137 ~~~------k~~~~i-~~A~--~aDLVIaNT~ 159 (298)
-.. .-.+.| +.+. ++||||..+-
T Consensus 95 ~~~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~ 126 (155)
T 3dlo_A 95 EEHLLVRGKEPPDDIVDFADEVDAIAIVIGIR 126 (155)
T ss_dssp EEEEEESSSCHHHHHHHHHHHTTCSEEEEECC
T ss_pred eEEEEecCCCHHHHHHHHHHHcCCCEEEECCC
Confidence 321 122233 3455 9999999864
No 239
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=46.23 E-value=50 Score=28.62 Aligned_cols=60 Identities=12% Similarity=0.115 Sum_probs=38.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCC----------chhhhhhhHHHHHHcC-Cceeeh
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSE----------EDEVIYSLEHKMWDRG-VQVISA 139 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~----------~g~v~~~L~~kll~rg-I~v~~~ 139 (298)
.+|+|++| |+-..-+|+|..|.+.|.+|.++....... .......+.+.+.++| |.+...
T Consensus 165 ~~~~vvVv-------G~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~ 235 (369)
T 3d1c_A 165 NKGQYVVI-------GGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVH 235 (369)
T ss_dssp CSSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCEEEEE-------CCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecC
Confidence 67888888 444567899999999999999987443210 1122234555566666 887743
No 240
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=46.21 E-value=62 Score=27.52 Aligned_cols=80 Identities=21% Similarity=0.205 Sum_probs=46.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
++||+||+. + |+.=+=.++|+.|.+.|++|.++..+.. +....+.+++.+.|.++. +-...+++.
T Consensus 27 l~~k~vlIT----G--as~gIG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 96 (271)
T 4iin_A 27 FTGKNVLIT----G--ASKGIGAEIAKTLASMGLKVWINYRSNA----EVADALKNELEEKGYKAAVIKFDAASESDFIE 96 (271)
T ss_dssp CSCCEEEET----T--CSSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred cCCCEEEEE----C--CCcHHHHHHHHHHHHCCCEEEEEeCCCH----HHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 467766652 1 2233567899999999999888775332 122234555555554432 112222222
Q ss_pred -------hhhccCEEEEechhc
Q 022363 147 -------TALKADLIVLNTAVA 161 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v~ 161 (298)
.....|.+|.|..+.
T Consensus 97 ~~~~~~~~~g~id~li~nAg~~ 118 (271)
T 4iin_A 97 AIQTIVQSDGGLSYLVNNAGVV 118 (271)
T ss_dssp HHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHhcCCCCEEEECCCcC
Confidence 224899999998753
No 241
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=46.07 E-value=50 Score=30.18 Aligned_cols=67 Identities=15% Similarity=0.091 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHhCCCeEEEEeccCCCCchh-hhhhhHHHHHHcCCceeehh---chhHHH--hhhccCEEEE
Q 022363 90 PLLLMELAFLLRGVGTKVNWITIQKPSEEDE-VIYSLEHKMWDRGVQVISAK---GQETIN--TALKADLIVL 156 (298)
Q Consensus 90 PLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~-v~~~L~~kll~rgI~v~~~k---~~~~i~--~A~~aDLVIa 156 (298)
|=+-..-.+.|.+.|++|+.+..+.+...|. ...+..+..++.|||++.-. ..+.++ ...++|+||+
T Consensus 9 ~~fa~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~l~~~~~Dliv~ 81 (305)
T 2bln_A 9 HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVIFS 81 (305)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEEEE
T ss_pred CHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHcCCCEECCCcCCcHHHHHHHHhcCCCEEEE
Confidence 3333444555666699998887654322221 12356778888899998432 222222 3569999986
No 242
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=45.82 E-value=32 Score=30.65 Aligned_cols=60 Identities=20% Similarity=0.125 Sum_probs=34.9
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS 138 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~ 138 (298)
++|+++-=--|..|-= +-+|+.|.+.|++|.++....... .+...-..+.+.+.|+++..
T Consensus 59 ~~v~VlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~~~~~~-~~~~~~~~~~~~~~g~~~~~ 118 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDG---LVCARHLKLFGYNPVVFYPKRSER-TEFYKQLVHQLNFFKVPVLS 118 (246)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCCEEEECCCCCTT-CHHHHHHHHHHHHTTCCEEC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEcCCCCC-CHHHHHHHHHHHHcCCcEEe
Confidence 3555544344444442 567999999999999886332222 22222334555666888753
No 243
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=45.69 E-value=22 Score=30.04 Aligned_cols=35 Identities=29% Similarity=0.178 Sum_probs=28.9
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~ 108 (298)
-.+||+||+| .|.=.||+ -|.+.++.|++.|...+
T Consensus 115 ~~~gk~VllV-DDvi~TG~--Tl~~a~~~L~~~Ga~~V 149 (205)
T 1yfz_A 115 DIEGKDVLIV-EDIIDSGL--TLAYLRETLLGRKPRSL 149 (205)
T ss_dssp CCTTSEEEEE-EEEESSCH--HHHHHHHHHHTTCCSEE
T ss_pred CCCcCEEEEE-CCccCcHH--HHHHHHHHHHhcCCCEE
Confidence 4689998887 78888999 67789999999987643
No 244
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=45.66 E-value=25 Score=33.35 Aligned_cols=40 Identities=10% Similarity=0.146 Sum_probs=30.8
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
.-++||++|+| .|.=.||+ -+.+.++.|++.|...+.+..
T Consensus 268 g~v~Gk~viiV-DDii~TG~--Tl~~a~~~L~~~Ga~~v~~~~ 307 (379)
T 2ji4_A 268 GDVGGRIAIIV-DDIIDDVD--SFLAAAETLKERGAYKIFVMA 307 (379)
T ss_dssp SCCTTSEEEEE-EEEECSCH--HHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCCEEEEE-ecCCCchH--HHHHHHHHHHhcCCCEEEEEE
Confidence 45899988877 55556777 677999999999998665554
No 245
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=45.33 E-value=86 Score=27.17 Aligned_cols=41 Identities=12% Similarity=-0.011 Sum_probs=25.0
Q ss_pred ccccEEEEEeccCCC-CCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 72 MKSKLVLLVSHELSL-SGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 72 ~~~KkILLISHELS~-TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
|..++|-+|..+.+. .--.-++-.+-..+++.|+++.+...
T Consensus 1 ~~~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~ 42 (350)
T 3h75_A 1 MSLTSVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYA 42 (350)
T ss_dssp --CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCCCEEEEECCCCCCChHHHHHHHHHHHHHHHcCCeEEEEEC
Confidence 456678888877644 22233445555677777888877753
No 246
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=45.28 E-value=65 Score=27.32 Aligned_cols=66 Identities=12% Similarity=0.075 Sum_probs=38.8
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee----hhchhHHH--------hhhccCEEEEech
Q 022363 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS----AKGQETIN--------TALKADLIVLNTA 159 (298)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~----~k~~~~i~--------~A~~aDLVIaNT~ 159 (298)
+=.++|+.|.+.|++|.++..+..+ -...+.+++.+.+..+.. -...++++ .....|.||.|..
T Consensus 38 IG~a~a~~l~~~G~~V~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg 113 (272)
T 4e3z_A 38 IGAAVCRLAARQGWRVGVNYAANRE----AADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAG 113 (272)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHCCCEEEEEcCCChh----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 5578999999999999887654321 112334455554444331 12222222 2247899999987
Q ss_pred hc
Q 022363 160 VA 161 (298)
Q Consensus 160 v~ 161 (298)
+.
T Consensus 114 ~~ 115 (272)
T 4e3z_A 114 IV 115 (272)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 247
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=45.01 E-value=70 Score=26.47 Aligned_cols=38 Identities=18% Similarity=0.100 Sum_probs=26.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (298)
++||++|+.. |+.=+=.++|+.|.+.|+.|.++..+..
T Consensus 5 l~~k~vlITG------as~gIG~~~a~~l~~~G~~v~~~~~~~~ 42 (255)
T 3icc_A 5 LKGKVALVTG------ASRGIGRAIAKRLANDGALVAIHYGNRK 42 (255)
T ss_dssp TTTCEEEETT------CSSHHHHHHHHHHHHTTCEEEEEESSCS
T ss_pred cCCCEEEEEC------CCChHHHHHHHHHHHCCCeEEEEeCCch
Confidence 5677666522 2233557899999999999988775543
No 248
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=44.83 E-value=1.3e+02 Score=25.49 Aligned_cols=85 Identities=15% Similarity=0.214 Sum_probs=50.8
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh----hchhHHH-h
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA----KGQETIN-T 147 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~----k~~~~i~-~ 147 (298)
..++|++-. |.+. .+.-.+-.++.+.+..|.++.++....++...+....+.+.+.+.|+++... ...+.|. .
T Consensus 169 ~~~~Ilv~~-d~s~-~s~~al~~a~~la~~~~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~I~~~ 246 (294)
T 3loq_A 169 LFDRVLVAY-DFSK-WADRALEYAKFVVKKTGGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVHVHIESGTPHKAILAK 246 (294)
T ss_dssp TTSEEEEEC-CSSH-HHHHHHHHHHHHHHHHTCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHH
T ss_pred cCCEEEEEE-CCCH-HHHHHHHHHHHHhhhcCCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHHHHH
Confidence 346677655 3332 3444455555666677999999985544333445555666777778875422 2223332 3
Q ss_pred h--hccCEEEEech
Q 022363 148 A--LKADLIVLNTA 159 (298)
Q Consensus 148 A--~~aDLVIaNT~ 159 (298)
+ .++|||+.++-
T Consensus 247 a~~~~~dLlV~G~~ 260 (294)
T 3loq_A 247 REEINATTIFMGSR 260 (294)
T ss_dssp HHHTTCSEEEEECC
T ss_pred HHhcCcCEEEEeCC
Confidence 3 38999999885
No 249
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=44.80 E-value=15 Score=33.40 Aligned_cols=35 Identities=26% Similarity=0.446 Sum_probs=27.6
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
++||+||+|+ |+ -+-...++.|.+.|++|.|+..+
T Consensus 11 l~~k~VLVVG------gG-~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 11 LKDKRILLIG------GG-EVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp CTTCEEEEEE------ES-HHHHHHHHHHGGGTCEEEEEEEE
T ss_pred cCCCEEEEEC------Cc-HHHHHHHHHHHhCCCEEEEEcCC
Confidence 3688888883 33 37788899999999999999843
No 250
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=44.71 E-value=46 Score=31.23 Aligned_cols=80 Identities=15% Similarity=0.270 Sum_probs=53.6
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeehhchhH------
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISAKGQET------ 144 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~---~~g~v~~~L~~kll~rgI~v~~~k~~~~------ 144 (298)
+|++++| |+-..-+|+|..|.+.|.+|.++...... .+.++...+.+.+.++|+++.....-..
T Consensus 182 ~~~vvVi-------GgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~ 254 (499)
T 1xdi_A 182 PDHLIVV-------GSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGA 254 (499)
T ss_dssp CSSEEEE-------SCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSS
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC
Confidence 4566666 45567889999999999999988744321 3456667788888889998875421111
Q ss_pred ---HH----hhhccCEEEEechh
Q 022363 145 ---IN----TALKADLIVLNTAV 160 (298)
Q Consensus 145 ---i~----~A~~aDLVIaNT~v 160 (298)
+. ....+|.||..|-.
T Consensus 255 ~v~v~~~~g~~i~aD~Vv~a~G~ 277 (499)
T 1xdi_A 255 GVLVTMTDGRTVEGSHALMTIGS 277 (499)
T ss_dssp SEEEEETTSCEEEESEEEECCCE
T ss_pred EEEEEECCCcEEEcCEEEECCCC
Confidence 11 12367888876654
No 251
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=44.62 E-value=19 Score=29.53 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=27.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCC-Ce
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG-TK 106 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G-~~ 106 (298)
.+||+||+| .|.-.||+ -|.++++.|++.| ..
T Consensus 96 ~~gk~VllV-DDvitTG~--Tl~~a~~~L~~~G~a~ 128 (181)
T 1a3c_A 96 ITDQKVILV-DDVLYTGR--TVRAGMDALVDVGRPS 128 (181)
T ss_dssp CTTSEEEEE-EEEESSSH--HHHHHHHHHHHHCCCS
T ss_pred CCCCEEEEE-eCccCcHH--HHHHHHHHHHhcCCCc
Confidence 689998887 78888999 6778999999997 54
No 252
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=44.53 E-value=52 Score=26.56 Aligned_cols=39 Identities=13% Similarity=0.043 Sum_probs=30.1
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (298)
++--+++||+ +|-.--..++++..|+.|..++.+++..+
T Consensus 116 ~~d~vI~iS~----SG~t~~~~~~~~~ak~~g~~vI~IT~~~~ 154 (198)
T 2xbl_A 116 EGDVLIGYST----SGKSPNILAAFREAKAKGMTCVGFTGNRG 154 (198)
T ss_dssp TTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred CCCEEEEEeC----CCCCHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 3455666766 46556778999999999999999997655
No 253
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=44.48 E-value=33 Score=32.13 Aligned_cols=40 Identities=18% Similarity=0.265 Sum_probs=31.6
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
+-++||++|+| .|.=.||+ -|.+.++.|++.|...+....
T Consensus 209 g~v~gk~viIV-DDii~TG~--Tl~~a~~~L~~~Ga~~v~~~~ 248 (326)
T 3s5j_B 209 GDVKDRVAILV-DDMADTCG--TICHAADKLLSAGATRVYAIL 248 (326)
T ss_dssp SCCTTSEEEEE-EEEESSCH--HHHHHHHHHHHTTCSEEEEEE
T ss_pred ccCCCCEEEEE-ccccCCcH--HHHHHHHHHHHcCCCEEEEEE
Confidence 34789998887 67777888 688999999999998655554
No 254
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=44.37 E-value=1.3e+02 Score=24.63 Aligned_cols=79 Identities=15% Similarity=0.183 Sum_probs=43.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
+++|+||+.. -+| -+=.++++.|.+.|++|.++..... . ...+.+++...+.++. +-....+++
T Consensus 9 ~~~~~vlVtG----asg--giG~~la~~l~~~G~~V~~~~r~~~----~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 77 (255)
T 1fmc_A 9 LDGKCAIITG----AGA--GIGKEIAITFATAGASVVVSDINAD----A-ANHVVDEIQQLGGQAFACRCDITSEQELSA 77 (255)
T ss_dssp CTTCEEEETT----TTS--HHHHHHHHHHHTTTCEEEEEESCHH----H-HHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEC----Ccc--HHHHHHHHHHHHCCCEEEEEcCCHH----H-HHHHHHHHHHhCCceEEEEcCCCCHHHHHH
Confidence 5778766542 223 3557899999999999887763321 1 1123344444443322 112222332
Q ss_pred -------hhhccCEEEEechhc
Q 022363 147 -------TALKADLIVLNTAVA 161 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v~ 161 (298)
...++|.||.|....
T Consensus 78 ~~~~~~~~~~~~d~vi~~Ag~~ 99 (255)
T 1fmc_A 78 LADFAISKLGKVDILVNNAGGG 99 (255)
T ss_dssp HHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHhcCCCCEEEECCCCC
Confidence 123899999987653
No 255
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=44.31 E-value=40 Score=27.00 Aligned_cols=39 Identities=10% Similarity=0.035 Sum_probs=29.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (298)
++--+++||+ +|-.--+.++++..|+.|.++..+++..+
T Consensus 110 ~~Dvvi~iS~----sG~t~~~~~~~~~ak~~g~~vi~iT~~~~ 148 (188)
T 1tk9_A 110 EKDVLIGIST----SGKSPNVLEALKKAKELNMLCLGLSGKGG 148 (188)
T ss_dssp TTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEEEEEEGGG
T ss_pred CCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3455666665 56666778999999999999999996654
No 256
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=44.22 E-value=96 Score=25.34 Aligned_cols=74 Identities=18% Similarity=0.160 Sum_probs=42.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH--cCCcee--ehhchhHHHh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD--RGVQVI--SAKGQETINT 147 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~--rgI~v~--~~k~~~~i~~ 147 (298)
|++|++|+..- +| -+=.++++.|.+.|++|.++... . . .++ ++.+ .++.++ +-...++++.
T Consensus 5 ~~~~~vlVTGa----sg--giG~~~a~~l~~~G~~V~~~~r~-~---~----~~~-~~~~~~~~~~~~~~D~~~~~~~~~ 69 (244)
T 1cyd_A 5 FSGLRALVTGA----GK--GIGRDTVKALHASGAKVVAVTRT-N---S----DLV-SLAKECPGIEPVCVDLGDWDATEK 69 (244)
T ss_dssp CTTCEEEEEST----TS--HHHHHHHHHHHHTTCEEEEEESC-H---H----HHH-HHHHHSTTCEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeCC----Cc--hHHHHHHHHHHHCCCEEEEEeCC-H---H----HHH-HHHHhccCCCcEEecCCCHHHHHH
Confidence 57787766432 23 25568899999999998877633 2 1 122 2222 244444 2233334442
Q ss_pred ----hhccCEEEEechh
Q 022363 148 ----ALKADLIVLNTAV 160 (298)
Q Consensus 148 ----A~~aDLVIaNT~v 160 (298)
...+|.||.|...
T Consensus 70 ~~~~~~~id~vi~~Ag~ 86 (244)
T 1cyd_A 70 ALGGIGPVDLLVNNAAL 86 (244)
T ss_dssp HHTTCCCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCcc
Confidence 2358999988764
No 257
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=44.21 E-value=75 Score=25.66 Aligned_cols=74 Identities=16% Similarity=0.086 Sum_probs=43.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhC--CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~--G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~- 146 (298)
+++|+||+.. -||. +=.++++.|.+. |++|..+..+.. .+ +++ ..++..+.. ....++.
T Consensus 2 ~~~~~ilVtG----asG~--iG~~l~~~l~~~~~g~~V~~~~r~~~--------~~-~~~-~~~~~~~~~D~~d~~~~~~ 65 (253)
T 1xq6_A 2 ANLPTVLVTG----ASGR--TGQIVYKKLKEGSDKFVAKGLVRSAQ--------GK-EKI-GGEADVFIGDITDADSINP 65 (253)
T ss_dssp CSCCEEEEES----TTSH--HHHHHHHHHHHTTTTCEEEEEESCHH--------HH-HHT-TCCTTEEECCTTSHHHHHH
T ss_pred CCCCEEEEEc----CCcH--HHHHHHHHHHhcCCCcEEEEEEcCCC--------ch-hhc-CCCeeEEEecCCCHHHHHH
Confidence 3567776653 2333 566888999998 899988874321 11 111 234444421 2334454
Q ss_pred hhhccCEEEEechhc
Q 022363 147 TALKADLIVLNTAVA 161 (298)
Q Consensus 147 ~A~~aDLVIaNT~v~ 161 (298)
...++|.||.|....
T Consensus 66 ~~~~~d~vi~~a~~~ 80 (253)
T 1xq6_A 66 AFQGIDALVILTSAV 80 (253)
T ss_dssp HHTTCSEEEECCCCC
T ss_pred HHcCCCEEEEecccc
Confidence 456899999887643
No 258
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=43.98 E-value=51 Score=31.04 Aligned_cols=80 Identities=19% Similarity=0.264 Sum_probs=54.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhC---CCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeehhchh----
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGV---GTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISAKGQE---- 143 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~---G~~V~vL~~~~G---~~~g~v~~~L~~kll~rgI~v~~~k~~~---- 143 (298)
.|++++| |+-..-+|+|..|++. |.+|.++..... ..+.++...+.+.+.++||.+.....-.
T Consensus 187 ~~~vvVi-------GgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 259 (490)
T 1fec_A 187 PKRALCV-------GGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTK 259 (490)
T ss_dssp CSEEEEE-------CSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEE
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEE
Confidence 4778887 4445778999999999 999999984432 1335566678888888899887542111
Q ss_pred ------HHHh----hhccCEEEEechh
Q 022363 144 ------TINT----ALKADLIVLNTAV 160 (298)
Q Consensus 144 ------~i~~----A~~aDLVIaNT~v 160 (298)
.+.+ ...+|.||..|-.
T Consensus 260 ~~~~~~~v~~~~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 260 NADGTRHVVFESGAEADYDVVMLAIGR 286 (490)
T ss_dssp CTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred cCCCEEEEEECCCcEEEcCEEEEccCC
Confidence 1111 2368999887754
No 259
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=43.79 E-value=75 Score=26.59 Aligned_cols=67 Identities=15% Similarity=0.145 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee----hhchhHHH--------hhhccCEEEEec
Q 022363 91 LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS----AKGQETIN--------TALKADLIVLNT 158 (298)
Q Consensus 91 LlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~----~k~~~~i~--------~A~~aDLVIaNT 158 (298)
=+=.++|+.|.+.|++|.++..+.. +-...+.+++.+.|..+.. -...++++ .....|.+|.|.
T Consensus 15 gIG~~ia~~l~~~G~~V~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nA 90 (246)
T 3osu_A 15 GIGRSIALQLAEEGYNVAVNYAGSK----EKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNA 90 (246)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCH----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3557899999999999988764432 1112334555555554431 12222222 234899999987
Q ss_pred hhc
Q 022363 159 AVA 161 (298)
Q Consensus 159 ~v~ 161 (298)
.+.
T Consensus 91 g~~ 93 (246)
T 3osu_A 91 GIT 93 (246)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 260
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=43.45 E-value=91 Score=26.14 Aligned_cols=76 Identities=16% Similarity=0.201 Sum_probs=42.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
|+||++|+.. -+| -+=.++++.|.+.|++|.++... .+ . .+.+++.+.|.++. +-...++++
T Consensus 2 l~~k~vlVTG----as~--giG~~ia~~l~~~G~~V~~~~r~-~~--~----~~~~~l~~~~~~~~~~~~D~~~~~~v~~ 68 (255)
T 2q2v_A 2 LKGKTALVTG----STS--GIGLGIAQVLARAGANIVLNGFG-DP--A----PALAEIARHGVKAVHHPADLSDVAQIEA 68 (255)
T ss_dssp CTTCEEEESS----CSS--HHHHHHHHHHHHTTCEEEEECSS-CC--H----HHHHHHHTTSCCEEEECCCTTSHHHHHH
T ss_pred CCCCEEEEeC----CCc--HHHHHHHHHHHHCCCEEEEEeCC-ch--H----HHHHHHHhcCCceEEEeCCCCCHHHHHH
Confidence 4677665431 222 35578999999999998776533 21 1 23455544443332 112223332
Q ss_pred -------hhhccCEEEEechh
Q 022363 147 -------TALKADLIVLNTAV 160 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v 160 (298)
....+|.+|.|..+
T Consensus 69 ~~~~~~~~~g~id~lv~~Ag~ 89 (255)
T 2q2v_A 69 LFALAEREFGGVDILVNNAGI 89 (255)
T ss_dssp HHHHHHHHHSSCSEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 12379999999764
No 261
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=43.09 E-value=98 Score=26.11 Aligned_cols=80 Identities=11% Similarity=0.184 Sum_probs=44.6
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCC-chhhhhhhHHHHHHcCCceeeh--hchhHHH-hhh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSE-EDEVIYSLEHKMWDRGVQVISA--KGQETIN-TAL 149 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~-~g~v~~~L~~kll~rgI~v~~~--k~~~~i~-~A~ 149 (298)
.|+|++++ -||. +=-++++.|.+.|++|.++....... ..+- ....+.+...|+.++.. ....++. ...
T Consensus 4 ~~~ilVtG----atG~--iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~ 76 (308)
T 1qyc_A 4 RSRILLIG----ATGY--IGRHVAKASLDLGHPTFLLVRESTASSNSEK-AQLLESFKASGANIVHGSIDDHASLVEAVK 76 (308)
T ss_dssp CCCEEEES----TTST--THHHHHHHHHHTTCCEEEECCCCCTTTTHHH-HHHHHHHHTTTCEEECCCTTCHHHHHHHHH
T ss_pred CCEEEEEc----CCcH--HHHHHHHHHHhCCCCEEEEECCcccccCHHH-HHHHHHHHhCCCEEEEeccCCHHHHHHHHc
Confidence 35666654 2332 33467788888999998877443210 0111 01112344568877632 2334454 456
Q ss_pred ccCEEEEechh
Q 022363 150 KADLIVLNTAV 160 (298)
Q Consensus 150 ~aDLVIaNT~v 160 (298)
++|.||.++..
T Consensus 77 ~~d~vi~~a~~ 87 (308)
T 1qyc_A 77 NVDVVISTVGS 87 (308)
T ss_dssp TCSEEEECCCG
T ss_pred CCCEEEECCcc
Confidence 89999988754
No 262
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=43.08 E-value=47 Score=26.36 Aligned_cols=71 Identities=21% Similarity=0.161 Sum_probs=44.4
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhccC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~aD 152 (298)
+|++|.++-.|-- ..+-+......|+..|+++.++..++++ +. -..|+.+..+.....++ ...+|
T Consensus 1 ~~~ki~il~~~g~---~~~e~~~~~~~l~~ag~~v~~vs~~~~~----v~-------~~~g~~i~~~~~~~~~~-~~~~D 65 (168)
T 3l18_A 1 ASMKVLFLSADGF---EDLELIYPLHRIKEEGHEVYVASFQRGK----IT-------GKHGYSVNVDLTFEEVD-PDEFD 65 (168)
T ss_dssp CCCEEEEECCTTB---CHHHHHHHHHHHHHTTCEEEEEESSSEE----EE-------CTTSCEEEECEEGGGCC-GGGCS
T ss_pred CCcEEEEEeCCCc---cHHHHHHHHHHHHHCCCEEEEEECCCCE----Ee-------cCCCcEEeccCChhHCC-HhhCC
Confidence 4678877765521 2344556668888999999999865542 21 13477777664443332 35799
Q ss_pred EEEEec
Q 022363 153 LIVLNT 158 (298)
Q Consensus 153 LVIaNT 158 (298)
.||+=-
T Consensus 66 ~livpG 71 (168)
T 3l18_A 66 ALVLPG 71 (168)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 998743
No 263
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=43.07 E-value=95 Score=25.89 Aligned_cols=39 Identities=8% Similarity=-0.111 Sum_probs=23.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
++++|-+|..+.+..--.-++-.+...+++.|+++.++.
T Consensus 3 ~~~~Ig~i~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~ 41 (303)
T 3d02_A 3 AEKTVVNISKVDGMPWFNRMGEGVVQAGKEFNLNASQVG 41 (303)
T ss_dssp -CEEEEEECSCSSCHHHHHHHHHHHHHHHHTTEEEEEEC
T ss_pred CceEEEEEeccCCChHHHHHHHHHHHHHHHcCCEEEEEC
Confidence 456777877665432222234455567788888887654
No 264
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=42.85 E-value=21 Score=29.43 Aligned_cols=30 Identities=20% Similarity=0.283 Sum_probs=25.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCC
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG 104 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G 104 (298)
++||+||+| .|.-.||+ -|.+.++.|++.|
T Consensus 94 ~~gk~VllV-DDvitTG~--Tl~~a~~~L~~~G 123 (181)
T 1ufr_A 94 LTGKAIVLV-DDVLYTGR--TARAALDALIDLG 123 (181)
T ss_dssp CTTCEEEEE-EEEESSSH--HHHHHHHHHHHHC
T ss_pred CCCCEEEEE-ecCCCcHH--HHHHHHHHHHhcC
Confidence 589988887 78888999 6778999999998
No 265
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=42.81 E-value=1.5e+02 Score=24.85 Aligned_cols=40 Identities=10% Similarity=-0.110 Sum_probs=25.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
++++|-+|..+.+..--.-++-.+...+++.|+++.+...
T Consensus 15 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 54 (289)
T 2fep_A 15 KTTTVGVIIPDISSIFYSELARGIEDIATMYKYNIILSNS 54 (289)
T ss_dssp -CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 4566777776654332233555666788889999877653
No 266
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=42.51 E-value=55 Score=26.54 Aligned_cols=64 Identities=16% Similarity=0.103 Sum_probs=41.0
Q ss_pred EEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh----c-h----hHHH-
Q 022363 77 VLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK----G-Q----ETIN- 146 (298)
Q Consensus 77 ILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k----~-~----~~i~- 146 (298)
+|+.-||-+-. -++++|+.|.+.|+++..-. | ..+-+.+.|+++-.-. + . ..+.
T Consensus 27 vliSv~d~dK~----~l~~~a~~l~~lGf~i~AT~---G---------Ta~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d 90 (143)
T 2yvq_A 27 ILIGIQQSFRP----RFLGVAEQLHNEGFKLFATE---A---------TSDWLNANNVPATPVAWPSQEGQNPSLSSIRK 90 (143)
T ss_dssp EEEECCGGGHH----HHHHHHHHHHTTTCEEEEEH---H---------HHHHHHHTTCCCEEECCGGGC-----CBCHHH
T ss_pred EEEEecccchH----HHHHHHHHHHHCCCEEEECc---h---------HHHHHHHcCCeEEEEEeccCCCcccccccHHH
Confidence 55555887654 47899999999999866543 2 2345556688876431 1 1 2222
Q ss_pred --hhhccCEEEE
Q 022363 147 --TALKADLIVL 156 (298)
Q Consensus 147 --~A~~aDLVIa 156 (298)
...++|+||-
T Consensus 91 ~i~~g~i~lVIn 102 (143)
T 2yvq_A 91 LIRDGSIDLVIN 102 (143)
T ss_dssp HHHTTSCCEEEE
T ss_pred HHHCCCceEEEE
Confidence 3568999984
No 267
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=42.36 E-value=35 Score=31.69 Aligned_cols=83 Identities=20% Similarity=0.152 Sum_probs=53.6
Q ss_pred EEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC----------------------CchhhhhhhHHHHHHc-CCc
Q 022363 79 LVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS----------------------EEDEVIYSLEHKMWDR-GVQ 135 (298)
Q Consensus 79 LISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~----------------------~~g~v~~~L~~kll~r-gI~ 135 (298)
+|+++-.+---|.-.++.++.|++.|+.|.-.+..++. ..|.....+.+.+.+. ++|
T Consensus 110 v~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vP 189 (265)
T 1wv2_A 110 VLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVP 189 (265)
T ss_dssp CBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSC
T ss_pred eecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCC
Confidence 45555555678888899999999989888854433322 1122233455666655 788
Q ss_pred eeehhchhH-----HHhhhccCEEEEechhc
Q 022363 136 VISAKGQET-----INTALKADLIVLNTAVA 161 (298)
Q Consensus 136 v~~~k~~~~-----i~~A~~aDLVIaNT~v~ 161 (298)
|+-+=+..+ .-....+|-|++||++.
T Consensus 190 VI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~ 220 (265)
T 1wv2_A 190 VLVDAGVGTASDAAIAMELGCEAVLMNTAIA 220 (265)
T ss_dssp BEEESCCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred EEEeCCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 886632222 11456999999999885
No 268
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=42.25 E-value=32 Score=27.46 Aligned_cols=78 Identities=14% Similarity=0.095 Sum_probs=39.2
Q ss_pred ccccEEEEE-eccCCCCCchHHHHHHHHHHHhCCCeEEEEe-ccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHHh
Q 022363 72 MKSKLVLLV-SHELSLSGGPLLLMELAFLLRGVGTKVNWIT-IQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETINT 147 (298)
Q Consensus 72 ~~~KkILLI-SHELS~TGAPLlLleLA~~Lkq~G~~V~vL~-~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~~ 147 (298)
|+.|+|||| +|+.-|+ |+. =-+++.+. |..+.+-+ |-.+ ..+-+.-.+-+.++||.+-.. +..... .
T Consensus 1 M~~~~VLFVC~gN~cRS--pmA-Eai~~~~~--~~~~~v~SAGt~~---~~~~p~a~~~l~~~Gid~s~~~sr~l~~~-~ 71 (139)
T 1jl3_A 1 MENKIIYFLCTGNSCRS--QMA-EGWAKQYL--GDEWKVYSAGIEA---HGLNPNAVKAMKEVGIDISNQTSDIIDSD-I 71 (139)
T ss_dssp --CEEEEEEESSSSSHH--HHH-HHHHHHHS--CTTEEEEEEESSC---CCCCHHHHHHHHHTTCCCTTCCCCBCCHH-H
T ss_pred CCCCeEEEEcCCchHHH--HHH-HHHHHHhC--CCCEEEEcCcCCC---CCCCHHHHHHHHHcCCCcccCccCcCCHH-H
Confidence 445689999 4555444 221 11223332 33344444 3322 123334456777779987532 222222 2
Q ss_pred hhccCEEEEec
Q 022363 148 ALKADLIVLNT 158 (298)
Q Consensus 148 A~~aDLVIaNT 158 (298)
...||+||+=+
T Consensus 72 ~~~~D~Ii~m~ 82 (139)
T 1jl3_A 72 LNNADLVVTLC 82 (139)
T ss_dssp HTTCSEEEECS
T ss_pred hhcCCEEEEeC
Confidence 56899999753
No 269
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=42.21 E-value=1.5e+02 Score=24.67 Aligned_cols=40 Identities=0% Similarity=-0.195 Sum_probs=24.1
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCC-eEEEEec
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGT-KVNWITI 112 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~-~V~vL~~ 112 (298)
++++|-+|..+.+..--.-++-.+...+++.|+ ++.+...
T Consensus 1 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 41 (309)
T 2fvy_A 1 ADTRIGVTIYKYDDNFMSVVRKAIEQDAKAAPDVQLLMNDS 41 (309)
T ss_dssp -CEEEEEEESCTTSHHHHHHHHHHHHHHHTCTTEEEEEEEC
T ss_pred CCcEEEEEeccCCcHHHHHHHHHHHHHHHhcCCeEEEEecC
Confidence 356777777665433222345556678888897 7766553
No 270
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=41.55 E-value=1.4e+02 Score=25.88 Aligned_cols=83 Identities=13% Similarity=0.122 Sum_probs=45.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHH---HcCCceeeh--hchhHHH
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW---DRGVQVISA--KGQETIN 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll---~rgI~v~~~--k~~~~i~ 146 (298)
|++|+||+.. -||. +=-++++.|.+.|++|.++...... ..+-...+.+++. ..++..+.. ....++.
T Consensus 25 ~~~~~vlVtG----atG~--iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 97 (352)
T 1sb8_A 25 AQPKVWLITG----VAGF--IGSNLLETLLKLDQKVVGLDNFATG-HQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCN 97 (352)
T ss_dssp HSCCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEECCSSC-CHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHH
T ss_pred ccCCeEEEEC----CCcH--HHHHHHHHHHHCCCEEEEEeCCCcc-chhhHHHHhhhcccccCCceEEEECCCCCHHHHH
Confidence 5677777652 3333 5567888899999999988743321 1111111111111 134544421 2233443
Q ss_pred -hhhccCEEEEechhc
Q 022363 147 -TALKADLIVLNTAVA 161 (298)
Q Consensus 147 -~A~~aDLVIaNT~v~ 161 (298)
...++|.||-|....
T Consensus 98 ~~~~~~d~vih~A~~~ 113 (352)
T 1sb8_A 98 NACAGVDYVLHQAALG 113 (352)
T ss_dssp HHHTTCSEEEECCSCC
T ss_pred HHhcCCCEEEECCccc
Confidence 455899999887653
No 271
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=41.51 E-value=66 Score=27.35 Aligned_cols=65 Identities=18% Similarity=0.131 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH--------hhhccCEEEEech
Q 022363 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN--------TALKADLIVLNTA 159 (298)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~--------~A~~aDLVIaNT~ 159 (298)
+=.++|+.|.+.|++|+++..+..+ -...+.+++.+.|..+. +-....+++ .....|.+|.|..
T Consensus 16 IG~aia~~l~~~G~~vv~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg 91 (258)
T 3oid_A 16 VGKAAAIRLAENGYNIVINYARSKK----AALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAA 91 (258)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5568899999999999987555421 11223444544444433 112222222 2347899999875
Q ss_pred h
Q 022363 160 V 160 (298)
Q Consensus 160 v 160 (298)
+
T Consensus 92 ~ 92 (258)
T 3oid_A 92 S 92 (258)
T ss_dssp C
T ss_pred C
Confidence 3
No 272
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=41.17 E-value=1.2e+02 Score=24.73 Aligned_cols=74 Identities=19% Similarity=0.218 Sum_probs=42.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH--cCCcee--ehhchhHHHh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD--RGVQVI--SAKGQETINT 147 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~--rgI~v~--~~k~~~~i~~ 147 (298)
++||+||+.. -+| -+=.++++.|.+.|++|.++... . . .++ ++.+ .++.++ +-...++++.
T Consensus 5 l~~k~vlITG----asg--giG~~~a~~l~~~G~~V~~~~r~-~---~----~~~-~~~~~~~~~~~~~~D~~~~~~~~~ 69 (244)
T 3d3w_A 5 LAGRRVLVTG----AGK--GIGRGTVQALHATGARVVAVSRT-Q---A----DLD-SLVRECPGIEPVCVDLGDWEATER 69 (244)
T ss_dssp CTTCEEEEES----TTS--HHHHHHHHHHHHTTCEEEEEESC-H---H----HHH-HHHHHSTTCEEEECCTTCHHHHHH
T ss_pred cCCcEEEEEC----CCc--HHHHHHHHHHHHCCCEEEEEeCC-H---H----HHH-HHHHHcCCCCEEEEeCCCHHHHHH
Confidence 5677766542 223 36678899999999998777632 1 1 122 2222 144444 2233334442
Q ss_pred ----hhccCEEEEechh
Q 022363 148 ----ALKADLIVLNTAV 160 (298)
Q Consensus 148 ----A~~aDLVIaNT~v 160 (298)
...+|.||.|...
T Consensus 70 ~~~~~~~id~vi~~Ag~ 86 (244)
T 3d3w_A 70 ALGSVGPVDLLVNNAAV 86 (244)
T ss_dssp HHTTCCCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCcc
Confidence 2358999988764
No 273
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=41.13 E-value=32 Score=22.91 Aligned_cols=38 Identities=24% Similarity=0.302 Sum_probs=27.8
Q ss_pred cCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEEecccCh
Q 022363 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSMNF 281 (298)
Q Consensus 238 ~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~~~sv~~ 281 (298)
+.+++.-+ .+.++ +-+.+.+.+|+|++++-|- +.-+.|
T Consensus 10 grs~e~k~----~l~~~-i~~~l~~~lg~p~~~v~v~-i~e~~~ 47 (62)
T 1otf_A 10 GRTDEQKE----TLIRQ-VSEAMANSLDAPLERVRVL-ITEMPK 47 (62)
T ss_dssp CCCHHHHH----HHHHH-HHHHHHHHHTCCGGGCEEE-EEEECG
T ss_pred CCCHHHHH----HHHHH-HHHHHHHHhCcCcccEEEE-EEEeCH
Confidence 45677666 88888 8888999999999986654 344443
No 274
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=41.07 E-value=96 Score=25.90 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=26.0
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
.-+++|+||+.. -+|+ +=.++++.|.+.|++|.++.
T Consensus 12 ~~l~~k~vlITG----asgg--iG~~~a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 12 NRLQDKVAIITG----GAGG--IGETTAKLFVRYGAKVVIAD 47 (278)
T ss_dssp CTTTTCEEEEES----TTSH--HHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCCEEEEEC----CCCH--HHHHHHHHHHHCCCEEEEEc
Confidence 346888777654 2332 55688999999999988875
No 275
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=40.79 E-value=38 Score=26.79 Aligned_cols=68 Identities=16% Similarity=0.177 Sum_probs=43.2
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCC--CeEEEEeccCCC---CchhhhhhhHHHHHHcCCceeehhch
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVG--TKVNWITIQKPS---EEDEVIYSLEHKMWDRGVQVISAKGQ 142 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G--~~V~vL~~~~G~---~~g~v~~~L~~kll~rgI~v~~~k~~ 142 (298)
-|..++|+.+ +-..++..-+.+|...++.| .+|.++.-..|. .+++-...+.+++++.|+++.-=+++
T Consensus 8 ~K~~ivi~s~-d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~L~~~~~~l~~~~~~~~~~Gv~~~aC~~C 80 (117)
T 2fb6_A 8 DKLTILWTTD-NKDTVFNMLAMYALNSKNRGWWKHINIILWGASVKLVANDTQVQTEILEMLQSGITIEACQDC 80 (117)
T ss_dssp SEEEEEECCC-CHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHHHHHHCHHHHHHHHHHHHHTCEEEEEHHH
T ss_pred CeEEEEEEcC-ChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeeeeccCCccHHHHHHHHHHcCCeEEEeHHH
Confidence 3667778775 33345566888999999999 799998832222 11222355666777777776644333
No 276
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=40.71 E-value=32 Score=32.08 Aligned_cols=39 Identities=15% Similarity=0.262 Sum_probs=29.8
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
-++||++|+| .|.=.||+ -|.+.++.|++.|...+....
T Consensus 213 ~v~gk~viiV-DDii~TG~--Tl~~a~~~L~~~Ga~~v~~~~ 251 (319)
T 3dah_A 213 EVEGRTCVIM-DDMVDTAG--TLCKAAQVLKERGAKQVFAYA 251 (319)
T ss_dssp --CCSEEEEE-EEEESSCH--HHHHHHHHHHHTTCSCEEEEE
T ss_pred cCCCCEEEEE-ecccCchH--HHHHHHHHHHHcCCCEEEEEE
Confidence 3789988877 77888888 578999999999987555543
No 277
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=40.69 E-value=78 Score=27.13 Aligned_cols=75 Identities=15% Similarity=0.147 Sum_probs=44.4
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-hhhcc
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TALKA 151 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~-~A~~a 151 (298)
|+||++. -||. +=-++++.|.+.|++|.++.....+ .. ...+++...|+.++.. ....++. ...++
T Consensus 12 ~~ilVtG----atG~--iG~~l~~~L~~~g~~V~~l~R~~~~-~~----~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~ 80 (318)
T 2r6j_A 12 SKILIFG----GTGY--IGNHMVKGSLKLGHPTYVFTRPNSS-KT----TLLDEFQSLGAIIVKGELDEHEKLVELMKKV 80 (318)
T ss_dssp CCEEEET----TTST--THHHHHHHHHHTTCCEEEEECTTCS-CH----HHHHHHHHTTCEEEECCTTCHHHHHHHHTTC
T ss_pred CeEEEEC----CCch--HHHHHHHHHHHCCCcEEEEECCCCc-hh----hHHHHhhcCCCEEEEecCCCHHHHHHHHcCC
Confidence 4566553 2332 3346778888899999888754321 11 1123345568877632 2334454 45689
Q ss_pred CEEEEechh
Q 022363 152 DLIVLNTAV 160 (298)
Q Consensus 152 DLVIaNT~v 160 (298)
|.||.|+..
T Consensus 81 d~vi~~a~~ 89 (318)
T 2r6j_A 81 DVVISALAF 89 (318)
T ss_dssp SEEEECCCG
T ss_pred CEEEECCch
Confidence 999998753
No 278
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=40.47 E-value=1.1e+02 Score=25.66 Aligned_cols=35 Identities=23% Similarity=0.246 Sum_probs=24.3
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
|++|++|+.. -+|+ +=.++++.|.+.|++|.++..
T Consensus 3 l~~k~vlVTG----as~g--iG~~ia~~l~~~G~~V~~~~r 37 (245)
T 1uls_A 3 LKDKAVLITG----AAHG--IGRATLELFAKEGARLVACDI 37 (245)
T ss_dssp TTTCEEEEES----TTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC----CCCH--HHHHHHHHHHHCCCEEEEEeC
Confidence 4677666543 2232 556788999999999888763
No 279
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=40.42 E-value=69 Score=26.60 Aligned_cols=80 Identities=19% Similarity=0.136 Sum_probs=43.6
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
+++|+||+.. -+| -+=.++++.|.+.|++|.++.....+ . ...+.+++.+.+..+. +-.....+.
T Consensus 5 l~~k~vlITG----asg--giG~~~a~~l~~~G~~V~~~~r~~~~---~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~ 74 (261)
T 1gee_A 5 LEGKVVVITG----SST--GLGKSMAIRFATEKAKVVVNYRSKED---E-ANSVLEEIKKVGGEAIAVKGDVTVESDVIN 74 (261)
T ss_dssp GTTCEEEETT----CSS--HHHHHHHHHHHHTTCEEEEEESSCHH---H-HHHHHHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEeC----CCC--hHHHHHHHHHHHCCCEEEEEcCCChH---H-HHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 5677666532 222 35578999999999998877642221 1 1123344444443322 112222222
Q ss_pred -------hhhccCEEEEechhc
Q 022363 147 -------TALKADLIVLNTAVA 161 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v~ 161 (298)
....+|.||.|..+.
T Consensus 75 ~~~~~~~~~g~id~li~~Ag~~ 96 (261)
T 1gee_A 75 LVQSAIKEFGKLDVMINNAGLE 96 (261)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 123789999997653
No 280
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=40.41 E-value=44 Score=32.42 Aligned_cols=59 Identities=17% Similarity=0.180 Sum_probs=39.9
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEE---EeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNW---ITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~v---L~~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
.+.+||+||+| .|.=.||+ -+.+.++.|++.|.+++- +..+ +. + =.+++.+.|+++..-
T Consensus 361 ~~~~G~~VliV-DDvitTG~--T~~~~~~~l~~~g~~vv~v~~lvdr-~~-~------g~~~l~~~g~~v~sL 422 (453)
T 3qw4_B 361 EYKKGDRVVII-DDLVSTGE--TKVEAIEKLRSAGLEVVSIVVLVDR-DM-G------AKAFLNKLGYDFEAV 422 (453)
T ss_dssp CCCTTCEEEEE-EEEECC-C--CHHHHHHHHHTTTCEEEEEEEEEEC-SS-S------HHHHHHHTTCCEEEE
T ss_pred ccCCCCEEEEE-eeeechhH--HHHHHHHHHHHcCCEEEEEEEEEEC-Cc-c------hHHHHHhcCCCEEEE
Confidence 35789999888 56666777 468899999999998643 3333 21 1 135677789988744
No 281
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=40.15 E-value=73 Score=27.71 Aligned_cols=80 Identities=18% Similarity=0.197 Sum_probs=45.3
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHH-HcCCceee-h-hchhHHH
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW-DRGVQVIS-A-KGQETIN 146 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll-~rgI~v~~-~-k~~~~i~ 146 (298)
++|++|+||+.. -||. +=-++++.|.+.|++|..+...... .... .+.+. ..++..+. | ....++.
T Consensus 5 ~~~~~~~vlVtG----atG~--iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~ 73 (357)
T 1rkx_A 5 SFWQGKRVFVTG----HTGF--KGGWLSLWLQTMGATVKGYSLTAPT-VPSL----FETARVADGMQSEIGDIRDQNKLL 73 (357)
T ss_dssp HHHTTCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEESSCSS-SSCH----HHHTTTTTTSEEEECCTTCHHHHH
T ss_pred hhhCCCEEEEEC----CCch--HHHHHHHHHHhCCCeEEEEeCCCcc-cchh----hHhhccCCceEEEEccccCHHHHH
Confidence 568888887652 3333 5567888999999999988754321 1111 12111 12444432 1 2233444
Q ss_pred h-hh--ccCEEEEechh
Q 022363 147 T-AL--KADLIVLNTAV 160 (298)
Q Consensus 147 ~-A~--~aDLVIaNT~v 160 (298)
. .. ++|.||-|...
T Consensus 74 ~~~~~~~~d~vih~A~~ 90 (357)
T 1rkx_A 74 ESIREFQPEIVFHMAAQ 90 (357)
T ss_dssp HHHHHHCCSEEEECCSC
T ss_pred HHHHhcCCCEEEECCCC
Confidence 2 22 48999988763
No 282
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=39.94 E-value=58 Score=32.67 Aligned_cols=64 Identities=13% Similarity=0.083 Sum_probs=44.9
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCc----hhhhhhhHHHHHHcCCceeehhch
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEE----DEVIYSLEHKMWDRGVQVISAKGQ 142 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~----g~v~~~L~~kll~rgI~v~~~k~~ 142 (298)
.||+|++|. .|+-..-+|+|..|++.|.+|.++.... -.. +.....+.+.+.++||++......
T Consensus 527 ~gk~VvVIG-----~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v 594 (729)
T 1o94_A 527 IGKRVVILN-----ADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTLEYPNMMRRLHELHVEELGDHFC 594 (729)
T ss_dssp CCSEEEEEE-----CCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTTCHHHHHHHHHHTTCEEECSEEE
T ss_pred CCCeEEEEc-----CCCCchHHHHHHHHHHcCCEEEEEeccc-ccccccccccHHHHHHHHHhCCCEEEcCcEE
Confidence 578999996 2444578899999999999999998543 111 011235667778889998876433
No 283
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=39.54 E-value=88 Score=26.80 Aligned_cols=80 Identities=13% Similarity=0.165 Sum_probs=45.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee---h-hchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS---A-KGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~---~-k~~~~i~- 146 (298)
++||.+|+.. |+-=+=.++|+.|.+.|+.|.++..+..+ -...+.+++.+.|..+.. | ...++++
T Consensus 26 l~~k~vlVTG------as~gIG~aia~~la~~G~~V~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~ 95 (269)
T 4dmm_A 26 LTDRIALVTG------ASRGIGRAIALELAAAGAKVAVNYASSAG----AADEVVAAIAAAGGEAFAVKADVSQESEVEA 95 (269)
T ss_dssp TTTCEEEETT------CSSHHHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEEC------CCCHHHHHHHHHHHHCCCEEEEEeCCChH----HHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 4677665521 22335678999999999999887753321 112334555554444331 1 2222222
Q ss_pred -------hhhccCEEEEechhc
Q 022363 147 -------TALKADLIVLNTAVA 161 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v~ 161 (298)
.....|.+|.|..+.
T Consensus 96 ~~~~~~~~~g~id~lv~nAg~~ 117 (269)
T 4dmm_A 96 LFAAVIERWGRLDVLVNNAGIT 117 (269)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 234799999997653
No 284
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=39.51 E-value=29 Score=31.25 Aligned_cols=71 Identities=13% Similarity=0.170 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhCCC----eEEEEeccC--CCCchhhhhhhHHHHHHcCCceeehhchhHHH---------hhhccCEEEE
Q 022363 92 LLMELAFLLRGVGT----KVNWITIQK--PSEEDEVIYSLEHKMWDRGVQVISAKGQETIN---------TALKADLIVL 156 (298)
Q Consensus 92 lLleLA~~Lkq~G~----~V~vL~~~~--G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~---------~A~~aDLVIa 156 (298)
+.+.++..|++.|. +|.++.... +..+.++...+++.+.++||++.......++. ....+|+||.
T Consensus 185 ~a~~~~~~l~~~g~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~ 264 (409)
T 3h8l_A 185 MSLMLHGYFKKKGMLDKVHVTVFSPGEYLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITIL 264 (409)
T ss_dssp HHHHHHHHHHTTTCTTTEEEEEECSSSSSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEE
T ss_pred HHHHHHHHHHHcCCCCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEE
Confidence 34455688999994 788777433 12334666678888888899988653322221 1347999998
Q ss_pred echhch
Q 022363 157 NTAVAG 162 (298)
Q Consensus 157 NT~v~g 162 (298)
.|-...
T Consensus 265 a~G~~~ 270 (409)
T 3h8l_A 265 LPPYTG 270 (409)
T ss_dssp ECCEEC
T ss_pred CCCCCc
Confidence 876543
No 285
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=39.51 E-value=1.4e+02 Score=25.50 Aligned_cols=85 Identities=14% Similarity=-0.001 Sum_probs=48.1
Q ss_pred EEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCc-ee-ehhchhHHHhhhccCE
Q 022363 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ-VI-SAKGQETINTALKADL 153 (298)
Q Consensus 76 kILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~-v~-~~k~~~~i~~A~~aDL 153 (298)
.|++...-+...+..-.+++.+..|++ +..+.++.+.++ ...+++.+.+.|++ |. .....+.......+|+
T Consensus 185 ~il~~~g~~~~~k~~~~li~a~~~l~~-~~~~l~i~G~~~------~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~ 257 (364)
T 1f0k_A 185 RVLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGS------QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV 257 (364)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTC------HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE
T ss_pred EEEEEcCchHhHHHHHHHHHHHHHhcC-CcEEEEEcCCch------HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE
Confidence 355555556555666778899988887 555445554432 12456666665542 22 1111222345678999
Q ss_pred EEEechhchHHHHHH
Q 022363 154 IVLNTAVAGKWLDAV 168 (298)
Q Consensus 154 VIaNT~v~g~wl~~l 168 (298)
+|..+- ....++++
T Consensus 258 ~v~~sg-~~~~~EAm 271 (364)
T 1f0k_A 258 VVCRSG-ALTVSEIA 271 (364)
T ss_dssp EEECCC-HHHHHHHH
T ss_pred EEECCc-hHHHHHHH
Confidence 999764 34444544
No 286
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=39.45 E-value=35 Score=22.66 Aligned_cols=33 Identities=27% Similarity=0.523 Sum_probs=26.1
Q ss_pred cCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEE
Q 022363 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (298)
Q Consensus 238 ~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~ 275 (298)
+.+++.-+ ++.++ +-+.+.+.+|+|++++-|..
T Consensus 10 grs~eqk~----~l~~~-i~~~l~~~lg~~~~~v~V~i 42 (61)
T 2opa_A 10 GRTDEQKR----NLVEK-VTEAVKETTGASEEKIVVFI 42 (61)
T ss_dssp CCCHHHHH----HHHHH-HHHHHHHHHCCCGGGCEEEE
T ss_pred CCCHHHHH----HHHHH-HHHHHHHHhCcCcCeEEEEE
Confidence 45677666 88888 88889999999999876643
No 287
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=39.06 E-value=69 Score=26.73 Aligned_cols=79 Identities=19% Similarity=0.196 Sum_probs=42.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
|+||++|+ + +-+| =+=.++++.|.+.|++|.++..+..+ .. ..+.+++.+.|.++. +-....+++
T Consensus 2 l~~k~vlV-T---Gas~--giG~~ia~~l~~~G~~V~~~~r~~~~---~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 71 (246)
T 2uvd_A 2 LKGKVALV-T---GASR--GIGRAIAIDLAKQGANVVVNYAGNEQ---KA-NEVVDEIKKLGSDAIAVRADVANAEDVTN 71 (246)
T ss_dssp CTTCEEEE-T---TCSS--HHHHHHHHHHHHTTCEEEEEESSCHH---HH-HHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEE-E---CCCc--HHHHHHHHHHHHCCCEEEEEeCCCHH---HH-HHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 46776554 3 2222 25568899999999998887642321 11 123344444443322 112222332
Q ss_pred -------hhhccCEEEEechh
Q 022363 147 -------TALKADLIVLNTAV 160 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v 160 (298)
....+|.+|.|..+
T Consensus 72 ~~~~~~~~~g~id~lv~nAg~ 92 (246)
T 2uvd_A 72 MVKQTVDVFGQVDILVNNAGV 92 (246)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 12379999988765
No 288
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=38.95 E-value=72 Score=27.18 Aligned_cols=36 Identities=25% Similarity=0.420 Sum_probs=29.1
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
+.++|+|++|. |++ .-+|+|..|.+.|.+|.++...
T Consensus 142 ~~~~k~vvViG------gG~-ig~E~A~~l~~~g~~Vtlv~~~ 177 (312)
T 4gcm_A 142 FFKNKRLFVIG------GGD-SAVEEGTFLTKFADKVTIVHRR 177 (312)
T ss_dssp GGTTCEEEEEC------CSH-HHHHHHHHHTTTCSEEEEECSS
T ss_pred ccCCCEEEEEC------CCH-HHHHHHHHHHhcCCEEEEEecc
Confidence 45689999984 444 5689999999999999999744
No 289
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=38.92 E-value=1.6e+02 Score=26.15 Aligned_cols=83 Identities=17% Similarity=0.173 Sum_probs=43.5
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
|++|.+|+.. -+ -=+=.++|+.|.+.|+.|.....+-.+...+-...+.+.+.+.|..+. +-....+++
T Consensus 3 m~~k~vlVTG----as--~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~ 76 (324)
T 3u9l_A 3 MSKKIILITG----AS--SGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDR 76 (324)
T ss_dssp --CCEEEESS----CS--SHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEC----CC--cHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHH
Confidence 4566555432 22 235668999999999999887643211112222234444444443332 112233332
Q ss_pred -------hhhccCEEEEechh
Q 022363 147 -------TALKADLIVLNTAV 160 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v 160 (298)
.....|.+|.|...
T Consensus 77 ~~~~~~~~~g~iD~lVnnAG~ 97 (324)
T 3u9l_A 77 AIDQIIGEDGRIDVLIHNAGH 97 (324)
T ss_dssp HHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCc
Confidence 22489999998764
No 290
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=38.81 E-value=74 Score=31.06 Aligned_cols=47 Identities=17% Similarity=0.335 Sum_probs=31.4
Q ss_pred HHHHHHHHHhCCCeEEEEe-ccCCC-----------------CchhhhhhhHHHHHHcCCceeeh
Q 022363 93 LMELAFLLRGVGTKVNWIT-IQKPS-----------------EEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 93 LleLA~~Lkq~G~~V~vL~-~~~G~-----------------~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+.+-..+|++.|++.++|. .-..+ ++.+-+.-|.+++-++||.|+.|
T Consensus 174 i~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD 238 (583)
T 1ea9_C 174 VIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLD 238 (583)
T ss_dssp HHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEE
T ss_pred HHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 4455699999999999998 21111 22333455666777778888876
No 291
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=38.77 E-value=1.3e+02 Score=25.26 Aligned_cols=41 Identities=20% Similarity=0.051 Sum_probs=26.0
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 66 ~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
+++..-++||++|+.. -+| -+=.++|+.|.+.|++|.++..
T Consensus 11 ~~~~~~~~~k~vlVTG----as~--gIG~~~a~~l~~~G~~V~~~~r 51 (249)
T 1o5i_A 11 HHMELGIRDKGVLVLA----ASR--GIGRAVADVLSQEGAEVTICAR 51 (249)
T ss_dssp -----CCTTCEEEEES----CSS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred hhHHhccCCCEEEEEC----CCC--HHHHHHHHHHHHCCCEEEEEcC
Confidence 4566677888877653 222 2556889999999999887763
No 292
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=38.77 E-value=85 Score=27.02 Aligned_cols=79 Identities=15% Similarity=0.186 Sum_probs=45.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
++||++|+.. |+.=+=.++|+.|.+.|+.|.++..+.. +-...+.+++.+.|..+. +-...++++
T Consensus 29 l~gk~~lVTG------as~GIG~aia~~la~~G~~V~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~ 98 (271)
T 3v2g_A 29 LAGKTAFVTG------GSRGIGAAIAKRLALEGAAVALTYVNAA----ERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQ 98 (271)
T ss_dssp CTTCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeC------CCcHHHHHHHHHHHHCCCEEEEEeCCCH----HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 4677666542 2223557899999999999888764432 111234455555554433 112222222
Q ss_pred -------hhhccCEEEEechh
Q 022363 147 -------TALKADLIVLNTAV 160 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v 160 (298)
.....|.+|.|..+
T Consensus 99 ~~~~~~~~~g~iD~lvnnAg~ 119 (271)
T 3v2g_A 99 AIRETVEALGGLDILVNSAGI 119 (271)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCcEEEECCCC
Confidence 23479999998765
No 293
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=38.76 E-value=1.7e+02 Score=24.76 Aligned_cols=41 Identities=15% Similarity=0.074 Sum_probs=27.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
++++|-+|..+.+..--.-++-.+-..+++.|+++.+....
T Consensus 14 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 54 (303)
T 3kke_A 14 RSGTIGLIVPDVNNAVFADMFSGVQMAASGHSTDVLLGQID 54 (303)
T ss_dssp ---CEEEEESCTTSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCEEEEEeCCCcChHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45667778777665544556667778888889888876643
No 294
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=38.75 E-value=68 Score=29.44 Aligned_cols=68 Identities=21% Similarity=0.205 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHHhCCCeEEEEeccC--CCCch--hhhhhhHHHHHHcCCceeehh---chhHHH--hhhccCEEEEe
Q 022363 90 PLLLMELAFLLRGVGTKVNWITIQK--PSEED--EVIYSLEHKMWDRGVQVISAK---GQETIN--TALKADLIVLN 157 (298)
Q Consensus 90 PLlLleLA~~Lkq~G~~V~vL~~~~--G~~~g--~v~~~L~~kll~rgI~v~~~k---~~~~i~--~A~~aDLVIaN 157 (298)
|=+-..-.+.|.+.|++|+.+..+. +..-| ....++.+..++.|||++.-. ..+.++ ...++|+||+-
T Consensus 12 ~~fa~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~l~~~~~Dliv~~ 88 (314)
T 1fmt_A 12 PDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQADVMVVV 88 (314)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEecCCCCCHHHHHHHHhcCCCEEEEe
Confidence 4344555566666799998777552 11111 112356888888999998542 122222 35699999874
No 295
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=38.73 E-value=67 Score=29.11 Aligned_cols=64 Identities=25% Similarity=0.232 Sum_probs=40.7
Q ss_pred cccEEEEEeccCCCCCc-hHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCceeeh
Q 022363 73 KSKLVLLVSHELSLSGG-PLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVISA 139 (298)
Q Consensus 73 ~~KkILLISHELS~TGA-PLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~r-gI~v~~~ 139 (298)
++|-|+|||.--|..|. |+ +.|+.+++.|+.|+.+.-.+++..++.-....+++.+. |-+.+..
T Consensus 9 ~~k~iillTDG~~~~g~~p~---~aa~~a~~~gi~v~tIGig~~~~~~~~~~~~L~~IA~~tGG~yf~a 74 (242)
T 3rag_A 9 TIRQILVITDGCSNIGPDPV---EAARRAHRHGIVVNVIGIVGRGDAGEQGYQEAHSIADAGGGMCRIV 74 (242)
T ss_dssp CEEEEEEEESSCCCSSSCHH---HHHHHHHHTTCEEEEEEECCSSSCTTCCCHHHHHHHHHTTSCEEEE
T ss_pred CccEEEEEccCCCCCCCCHH---HHHHHHHHCCCEEEEEEecCCccccchhHHHHHHHHHhcCCeEEEe
Confidence 57889999998888764 54 77888899999999998533321121101223455554 4444443
No 296
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=38.68 E-value=52 Score=30.44 Aligned_cols=37 Identities=16% Similarity=0.280 Sum_probs=28.4
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
++|.-|+||+++ |++ .-..+++.+++.|++++++...
T Consensus 2 n~m~~~kiLI~g------~g~-~a~~i~~aa~~~G~~~v~v~~~ 38 (446)
T 3ouz_A 2 NAMEIKSILIAN------RGE-IALRALRTIKEMGKKAICVYSE 38 (446)
T ss_dssp CTTCCCEEEECC------CHH-HHHHHHHHHHHTTCEEEEEEEG
T ss_pred CccccceEEEEC------CCH-HHHHHHHHHHHcCCEEEEEEcC
Confidence 467778888863 445 4568999999999999998743
No 297
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=38.62 E-value=27 Score=30.19 Aligned_cols=74 Identities=12% Similarity=0.179 Sum_probs=46.8
Q ss_pred ccccEEEEEeccCCCCCch--HHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCceeehh-----chh
Q 022363 72 MKSKLVLLVSHELSLSGGP--LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVISAK-----GQE 143 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAP--LlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~r-gI~v~~~k-----~~~ 143 (298)
+++|+|++. -||+. +-..++++.|++.|++|.++..+.. -.++.+.. +... |- ++.+. ...
T Consensus 6 l~~k~Illg-----vTGs~aa~k~~~l~~~L~~~g~~V~vv~T~~A---~~fi~~~~--~~~l~~~-v~~~~~~~~~~~~ 74 (194)
T 1p3y_1 6 LKDKKLLIG-----ICGSISSVGISSYLLYFKSFFKEIRVVMTKTA---EDLIPAHT--VSYFCDH-VYSEHGENGKRHS 74 (194)
T ss_dssp GGGCEEEEE-----ECSCGGGGGTHHHHHHHTTTSSEEEEEECHHH---HHHSCHHH--HGGGSSE-EECTTCSSSCCCC
T ss_pred cCCCEEEEE-----EECHHHHHHHHHHHHHHHHCCCEEEEEEchhH---HHHHHHHH--HHHhcCC-EeccccccCCCcC
Confidence 578888775 34444 5678999999999999999996643 22322222 2222 32 55542 133
Q ss_pred HHHhhhccCEEEE
Q 022363 144 TINTALKADLIVL 156 (298)
Q Consensus 144 ~i~~A~~aDLVIa 156 (298)
.+..+..+|++++
T Consensus 75 hi~l~~~aD~~vI 87 (194)
T 1p3y_1 75 HVEIGRWADIYCI 87 (194)
T ss_dssp HHHHHHHCSEEEE
T ss_pred cccccccCCEEEE
Confidence 4556678998886
No 298
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=38.52 E-value=46 Score=29.84 Aligned_cols=36 Identities=22% Similarity=0.173 Sum_probs=28.2
Q ss_pred EEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 76 kILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
+||+++.- ..|==.-++.||+.|++.|++|.+++..
T Consensus 2 rIl~~~~~--~~GH~~p~l~la~~L~~~Gh~V~~~~~~ 37 (416)
T 1rrv_A 2 RVLLSVCG--TRGDVEIGVALADRLKALGVQTRMCAPP 37 (416)
T ss_dssp EEEEEEES--CHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred eEEEEecC--CCccHHHHHHHHHHHHHCCCeEEEEeCH
Confidence 57777643 3365667889999999999999999843
No 299
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=38.37 E-value=69 Score=26.95 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=27.0
Q ss_pred EEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 77 VLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 77 ILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
|||++-+. +..|--+.++++.+|+.|+.+.++.-
T Consensus 110 iil~~~~~--~~~~~~~~~~a~~lk~~gi~v~~Ig~ 143 (192)
T 2x5n_A 110 VAFVGSPI--VEDEKNLIRLAKRMKKNNVAIDIIHI 143 (192)
T ss_dssp EEEECSCC--SSCHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEECCC--CCCchhHHHHHHHHHHCCCEEEEEEe
Confidence 66776666 34466788999999999999999983
No 300
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=38.21 E-value=1.4e+02 Score=26.68 Aligned_cols=74 Identities=16% Similarity=0.140 Sum_probs=42.0
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCceee---hhchhHHH-h
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVIS---AKGQETIN-T 147 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~r-gI~v~~---~k~~~~i~-~ 147 (298)
.+|+||+. +-||. +=-++++.|.+.|++|.++..+... . -.+++.+. ++.++. -....++. .
T Consensus 4 ~~~~ilVt----GatG~--iG~~l~~~L~~~g~~V~~~~R~~~~---~----~~~~l~~~~~v~~v~~D~l~d~~~l~~~ 70 (352)
T 1xgk_A 4 QKKTIAVV----GATGR--QGASLIRVAAAVGHHVRAQVHSLKG---L----IAEELQAIPNVTLFQGPLLNNVPLMDTL 70 (352)
T ss_dssp CCCCEEEE----STTSH--HHHHHHHHHHHTTCCEEEEESCSCS---H----HHHHHHTSTTEEEEESCCTTCHHHHHHH
T ss_pred CCCEEEEE----CCCCH--HHHHHHHHHHhCCCEEEEEECCCCh---h----hHHHHhhcCCcEEEECCccCCHHHHHHH
Confidence 35666654 23333 4456778888889999988744321 1 01233332 554442 12334454 4
Q ss_pred hhccCEEEEech
Q 022363 148 ALKADLIVLNTA 159 (298)
Q Consensus 148 A~~aDLVIaNT~ 159 (298)
..++|.||.|+.
T Consensus 71 ~~~~d~Vi~~a~ 82 (352)
T 1xgk_A 71 FEGAHLAFINTT 82 (352)
T ss_dssp HTTCSEEEECCC
T ss_pred HhcCCEEEEcCC
Confidence 568999998874
No 301
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=38.17 E-value=45 Score=25.69 Aligned_cols=37 Identities=14% Similarity=0.165 Sum_probs=30.5
Q ss_pred HHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 95 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 95 eLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
.++..|++.|.++++..+-++ +-...|.++||+++..
T Consensus 54 ~~~~~L~~~gv~~vi~~~iG~--------~a~~~L~~~GI~v~~~ 90 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTYGIGR--------RAIEYFNSLGISVVTG 90 (121)
T ss_dssp HHHHHHHHTTCCEEECSBCCH--------HHHHHHHHTTCEEECS
T ss_pred HHHHHHHHcCCCEEEECCCCH--------hHHHHHHHCCCEEEEC
Confidence 788889999999988886654 4568899999999975
No 302
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=38.08 E-value=1.5e+02 Score=25.18 Aligned_cols=36 Identities=14% Similarity=0.246 Sum_probs=25.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
++||.+|+.. |+.=+=.++|+.|.+.|++|.++...
T Consensus 9 l~~k~vlVTG------as~gIG~aia~~l~~~G~~V~~~~r~ 44 (271)
T 3tzq_B 9 LENKVAIITG------ACGGIGLETSRVLARAGARVVLADLP 44 (271)
T ss_dssp TTTCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCEEEEEC------CCcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 5678666542 22335568999999999998877643
No 303
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=38.05 E-value=87 Score=27.02 Aligned_cols=79 Identities=15% Similarity=0.158 Sum_probs=44.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee---h-hchhHH--
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS---A-KGQETI-- 145 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~---~-k~~~~i-- 145 (298)
+++|.+|+.. |+.=+=.++|+.|.+.|++|.++..+.. +-...+.+++...|.++.. | ...+++
T Consensus 27 ~~~k~~lVTG------as~GIG~aia~~la~~G~~V~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 96 (280)
T 4da9_A 27 KARPVAIVTG------GRRGIGLGIARALAASGFDIAITGIGDA----EGVAPVIAELSGLGARVIFLRADLADLSSHQA 96 (280)
T ss_dssp CCCCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEESCCH----HHHHHHHHHHHHTTCCEEEEECCTTSGGGHHH
T ss_pred cCCCEEEEec------CCCHHHHHHHHHHHHCCCeEEEEeCCCH----HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence 4567665532 2223557899999999999988874432 1112334455554544331 1 222222
Q ss_pred --H----hhhccCEEEEechh
Q 022363 146 --N----TALKADLIVLNTAV 160 (298)
Q Consensus 146 --~----~A~~aDLVIaNT~v 160 (298)
+ .....|.+|.|..+
T Consensus 97 ~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 97 TVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHHHHHSCCCEEEEECC-
T ss_pred HHHHHHHHcCCCCEEEECCCc
Confidence 2 23489999999875
No 304
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=37.49 E-value=1.6e+02 Score=25.37 Aligned_cols=78 Identities=12% Similarity=0.173 Sum_probs=45.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
++||++|+.. |+-=+=.++|+.|.+.|+.|.++..+.. . ...+.+++.+.|..+. +-...++++
T Consensus 30 l~gk~~lVTG------as~GIG~aia~~la~~G~~V~~~~r~~~-~----~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~ 98 (276)
T 3r1i_A 30 LSGKRALITG------ASTGIGKKVALAYAEAGAQVAVAARHSD-A----LQVVADEIAGVGGKALPIRCDVTQPDQVRG 98 (276)
T ss_dssp CTTCEEEEES------TTSHHHHHHHHHHHHTTCEEEEEESSGG-G----GHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeC------CCCHHHHHHHHHHHHCCCEEEEEeCCHH-H----HHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 5678766543 2223556889999999999887764321 1 1234555655543332 112222232
Q ss_pred -------hhhccCEEEEechh
Q 022363 147 -------TALKADLIVLNTAV 160 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v 160 (298)
.....|.+|.|..+
T Consensus 99 ~~~~~~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 99 MLDQMTGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 23389999999875
No 305
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=37.47 E-value=1.2e+02 Score=24.96 Aligned_cols=40 Identities=13% Similarity=0.008 Sum_probs=24.7
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
++++|-+|..+.+..--.-++-.+-..+++.|+++.+...
T Consensus 2 ~s~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~ 41 (275)
T 3d8u_A 2 NAYSIALIIPSLFEKACAHFLPSFQQALNKAGYQLLLGYS 41 (275)
T ss_dssp --CEEEEEESCSSCHHHHHHHHHHHHHHHHTSCEECCEEC
T ss_pred CceEEEEEeCCCccccHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 4567778877654332233455556778888998877653
No 306
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=37.43 E-value=2e+02 Score=24.67 Aligned_cols=84 Identities=10% Similarity=0.069 Sum_probs=41.7
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhch
Q 022363 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQ 142 (298)
Q Consensus 67 ~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~ 142 (298)
.+.+-+++|.+|+.. -+| =+=.++|+.|.+.|++|.++... . +-...+.+++.+.|..+. +-...
T Consensus 17 ~~~~m~~~k~~lVTG----as~--GIG~aia~~la~~G~~V~~~~r~-~----~~~~~~~~~l~~~~~~~~~~~~Dv~d~ 85 (279)
T 3sju_A 17 RGSHMSRPQTAFVTG----VSS--GIGLAVARTLAARGIAVYGCARD-A----KNVSAAVDGLRAAGHDVDGSSCDVTST 85 (279)
T ss_dssp --------CEEEEES----TTS--HHHHHHHHHHHHTTCEEEEEESC-H----HHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred CcccccCCCEEEEeC----CCC--HHHHHHHHHHHHCCCEEEEEeCC-H----HHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence 344445677655542 222 25568899999999998776532 1 111223445554454432 11222
Q ss_pred hHHH--------hhhccCEEEEechhc
Q 022363 143 ETIN--------TALKADLIVLNTAVA 161 (298)
Q Consensus 143 ~~i~--------~A~~aDLVIaNT~v~ 161 (298)
++++ .....|.+|.|..+.
T Consensus 86 ~~v~~~~~~~~~~~g~id~lv~nAg~~ 112 (279)
T 3sju_A 86 DEVHAAVAAAVERFGPIGILVNSAGRN 112 (279)
T ss_dssp HHHHHHHHHHHHHHCSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCcEEEECCCCC
Confidence 2222 234789999987653
No 307
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=37.38 E-value=70 Score=25.29 Aligned_cols=43 Identities=7% Similarity=0.036 Sum_probs=28.8
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS 116 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~ 116 (298)
.|..+++++..........-+.+|.-....|++|.+.....|.
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV 58 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGP 58 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGG
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcH
Confidence 3445555555434455556667787778889999988866663
No 308
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=37.34 E-value=1.1e+02 Score=26.41 Aligned_cols=82 Identities=13% Similarity=0.091 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh--------chhHHH--hhhccCEEEE--ech
Q 022363 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK--------GQETIN--TALKADLIVL--NTA 159 (298)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k--------~~~~i~--~A~~aDLVIa--NT~ 159 (298)
....++++|++.|+.=+.+...+.+...+...++.+.+.+.|+++.... ....+. ...++|.||+ |..
T Consensus 138 ~~~~~~~~l~~~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~d~~~~~~~l~~~~~dai~~~~~~~ 217 (375)
T 4evq_A 138 IGRATGDAMIKAGLKKAVTVTWKYAAGEEMVSGFKKSFTAGKGEVVKDITIAFPDVEFQSALAEIASLKPDCVYAFFSGG 217 (375)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEECTTCCCCHHHHHHHHHHCCSEEEEECCTH
T ss_pred HHHHHHHHHHHcCCcEEEEEecCchHHHHHHHHHHHHHHHcCCeEEEEEecCCCCccHHHHHHHHHhcCCCEEEEecCcc
Confidence 3455678888888874444433332333455677788888899875321 111222 2458999997 556
Q ss_pred hchHHHHHHhhccC
Q 022363 160 VAGKWLDAVLKEDV 173 (298)
Q Consensus 160 v~g~wl~~l~~~~~ 173 (298)
.+...++++.+..+
T Consensus 218 ~a~~~~~~~~~~g~ 231 (375)
T 4evq_A 218 GALKFIKDYAAANL 231 (375)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHcCC
Confidence 66777888764443
No 309
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=37.34 E-value=34 Score=35.93 Aligned_cols=26 Identities=27% Similarity=0.707 Sum_probs=20.1
Q ss_pred ccccccccccHHHHHHHHHhcc-ccccccc
Q 022363 201 PLVAGAMIDSHVTAEYWKNRTR-ERLRIKM 229 (298)
Q Consensus 201 p~v~~~~~~S~AtA~yw~~r~~-~~~~Ikl 229 (298)
|.|.-.|+++ +.||.+.++ |..|+-+
T Consensus 597 p~Vr~~i~d~---l~~Wl~e~gVDGfR~Da 623 (921)
T 2wan_A 597 PMAQKFVLDS---VNYWVNEYHVDGFRFDL 623 (921)
T ss_dssp HHHHHHHHHH---HHHHHHHHCCCEEEETT
T ss_pred HHHHHHHHHH---HHHHHHHcCCCEEEecc
Confidence 5666677764 899999888 8777776
No 310
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=37.33 E-value=1.9e+02 Score=24.37 Aligned_cols=83 Identities=16% Similarity=0.210 Sum_probs=46.2
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhch
Q 022363 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQ 142 (298)
Q Consensus 67 ~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~ 142 (298)
.+..-+++|++|+.. .+| =+=.++|+.|.+.|++|.++. +..+ -...+.+++.+.|..+. +-...
T Consensus 22 ~~m~~l~~k~vlITG----as~--gIG~~la~~l~~~G~~V~~~~-r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~ 90 (262)
T 3rkr_A 22 KHMSSLSGQVAVVTG----ASR--GIGAAIARKLGSLGARVVLTA-RDVE----KLRAVEREIVAAGGEAESHACDLSHS 90 (262)
T ss_dssp ---CTTTTCEEEESS----TTS--HHHHHHHHHHHHTTCEEEEEE-SCHH----HHHHHHHHHHHTTCEEEEEECCTTCH
T ss_pred chhhccCCCEEEEEC----CCC--hHHHHHHHHHHHCCCEEEEEE-CCHH----HHHHHHHHHHHhCCceeEEEecCCCH
Confidence 344557888766542 222 366788999999999987765 3221 11233455555554433 11222
Q ss_pred hHHH--------hhhccCEEEEechh
Q 022363 143 ETIN--------TALKADLIVLNTAV 160 (298)
Q Consensus 143 ~~i~--------~A~~aDLVIaNT~v 160 (298)
++++ .....|.||.|..+
T Consensus 91 ~~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 91 DAIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 2232 23479999999876
No 311
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=37.17 E-value=1.1e+02 Score=25.44 Aligned_cols=34 Identities=21% Similarity=0.241 Sum_probs=23.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCe-EEEEe
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTK-VNWIT 111 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~-V~vL~ 111 (298)
|+||++|+++ -+|+ +=.++|+.|.+.|++ |.++.
T Consensus 3 l~~k~vlVtG----as~g--IG~~~a~~l~~~G~~~v~~~~ 37 (254)
T 1sby_A 3 LTNKNVIFVA----ALGG--IGLDTSRELVKRNLKNFVILD 37 (254)
T ss_dssp CTTCEEEEET----TTSH--HHHHHHHHHHHTCCSEEEEEE
T ss_pred CCCcEEEEEC----CCCh--HHHHHHHHHHHCCCcEEEEEe
Confidence 5688777653 2333 567899999999998 55554
No 312
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=37.12 E-value=79 Score=25.74 Aligned_cols=75 Identities=20% Similarity=0.074 Sum_probs=43.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCC--eEEEEeccCCCCchhhhhhhHHHHHHcCCceee-h-hchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGT--KVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS-A-KGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~--~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~-~-k~~~~i~- 146 (298)
|++|+||+.. -|| -+=.++++.|.+.|+ +|.++..+.... .+. ...++..+. | ....++.
T Consensus 16 m~~~~vlVtG----asg--~iG~~l~~~L~~~G~~~~V~~~~r~~~~~-~~~--------~~~~~~~~~~D~~d~~~~~~ 80 (242)
T 2bka_A 16 MQNKSVFILG----ASG--ETGRVLLKEILEQGLFSKVTLIGRRKLTF-DEE--------AYKNVNQEVVDFEKLDDYAS 80 (242)
T ss_dssp HTCCEEEEEC----TTS--HHHHHHHHHHHHHTCCSEEEEEESSCCCC-CSG--------GGGGCEEEECCGGGGGGGGG
T ss_pred hcCCeEEEEC----CCc--HHHHHHHHHHHcCCCCCEEEEEEcCCCCc-ccc--------ccCCceEEecCcCCHHHHHH
Confidence 6778877653 233 355688889999999 888887443211 111 112333331 1 2233343
Q ss_pred hhhccCEEEEechhc
Q 022363 147 TALKADLIVLNTAVA 161 (298)
Q Consensus 147 ~A~~aDLVIaNT~v~ 161 (298)
...++|.||.|....
T Consensus 81 ~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 81 AFQGHDVGFCCLGTT 95 (242)
T ss_dssp GGSSCSEEEECCCCC
T ss_pred HhcCCCEEEECCCcc
Confidence 345899999987654
No 313
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=37.02 E-value=51 Score=28.16 Aligned_cols=45 Identities=13% Similarity=0.136 Sum_probs=30.6
Q ss_pred cccCCCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 62 IATKSSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 62 ~~~~~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
+..+..+...|+||++|+.. -+| -+=.++++.|.+.|++|.++..
T Consensus 14 ~~~~~~~~~~l~~k~vlITG----asg--giG~~la~~L~~~G~~V~~~~r 58 (302)
T 1w6u_A 14 LQKAMLPPNSFQGKVAFITG----GGT--GLGKGMTTLLSSLGAQCVIASR 58 (302)
T ss_dssp CCSCCSCTTTTTTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCCCcccCCCCEEEEEC----CCc--hHHHHHHHHHHHCCCEEEEEeC
Confidence 33444455668899877653 223 3557889999999999887763
No 314
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=36.99 E-value=69 Score=27.69 Aligned_cols=57 Identities=12% Similarity=0.189 Sum_probs=39.0
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHH-HcCCceeeh
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW-DRGVQVISA 139 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll-~rgI~v~~~ 139 (298)
.+|+|++| |+-..-+|+|..|.+.|.+|.++.....-... ..+.++++ ++||++...
T Consensus 154 ~~~~v~Vi-------G~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~~---~~~~~~~~~~~gV~v~~~ 211 (335)
T 2a87_A 154 RDQDIAVI-------GGGDSAMEEATFLTRFARSVTLVHRRDEFRAS---KIMLDRARNNDKIRFLTN 211 (335)
T ss_dssp TTCEEEEE-------CSSHHHHHHHHHHTTTCSEEEEECSSSSCSSC---TTHHHHHHHCTTEEEECS
T ss_pred CCCEEEEE-------CCCHHHHHHHHHHHHhCCeEEEEEcCCcCCcc---HHHHHHHhccCCcEEEeC
Confidence 57889888 44457889999999999999998744321111 13445554 468888754
No 315
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=36.97 E-value=1.2e+02 Score=25.37 Aligned_cols=35 Identities=20% Similarity=0.182 Sum_probs=23.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
|.+|++|+.. |+.=+=.++|+.|.+.|++|.++..
T Consensus 1 Ms~k~vlVTG------as~GIG~a~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 1 MSLGHIIVTG------AGSGLGRALTIGLVERGHQVSMMGR 35 (235)
T ss_dssp --CCEEEEES------TTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC------CCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 5667666543 2223557899999999999887763
No 316
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=36.71 E-value=1.8e+02 Score=24.17 Aligned_cols=39 Identities=10% Similarity=-0.234 Sum_probs=24.3
Q ss_pred cccEEEEEecc-C---CCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 73 KSKLVLLVSHE-L---SLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 73 ~~KkILLISHE-L---S~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
++++|-+|..+ . +..--.-++-.+...+++.|+++.+..
T Consensus 3 ~s~~Ig~i~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 45 (287)
T 3bbl_A 3 LSFMIGYSWTQTEPGQVNHILDQFLSSMVREAGAVNYFVLPFP 45 (287)
T ss_dssp CCCEEEECCCCCCTTCSCCTHHHHHHHHHHHHHHTTCEEEECC
T ss_pred ceeEEEEEecccccccCChhHHHHHHHHHHHHHHcCCEEEEEe
Confidence 35667777666 5 333233455566678888898887654
No 317
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=36.60 E-value=28 Score=31.71 Aligned_cols=35 Identities=20% Similarity=0.347 Sum_probs=29.7
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~ 108 (298)
..+||+||+| .|.-.||+ -+.++++.|++.|.+++
T Consensus 193 l~~Gk~VLIV-DDViTTG~--Tl~~a~~~L~~aGA~vV 227 (291)
T 1o57_A 193 MKTGSNVLII-DDFMKAGG--TINGMINLLDEFNANVA 227 (291)
T ss_dssp SCTTCEEEEE-EEEESSSH--HHHHHHHHTGGGTCEEE
T ss_pred CCCcCEEEEE-EEEcCcHH--HHHHHHHHHHHCCCEEE
Confidence 3589999888 78888899 67899999999999865
No 318
>3mlc_A FG41 malonate semialdehyde decarboxylase; tautomerase superfamily, malonate semialdehyde decarboxylase alpha-beta-motif; 2.22A {Coryneform bacterium} SCOP: d.80.1.0 PDB: 3mjz_A
Probab=36.36 E-value=59 Score=26.17 Aligned_cols=32 Identities=28% Similarity=0.482 Sum_probs=26.3
Q ss_pred cCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEE
Q 022363 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (298)
Q Consensus 238 ~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~ 275 (298)
+.++|.-+ .+.+. +-+.+ +.+|++++|+.|..
T Consensus 75 gRt~EqK~----~L~~~-it~~l-~~lg~~~~~v~V~i 106 (136)
T 3mlc_A 75 GRTIETKQ----RVFAA-ITESL-APIGVAGSDVFIAI 106 (136)
T ss_dssp TCCHHHHH----HHHHH-HHHHH-TTTTCCGGGEEEEE
T ss_pred CCCHHHHH----HHHHH-HHHHH-HHcCCCcccEEEEE
Confidence 67887777 88888 77778 99999999988754
No 319
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=36.27 E-value=1.2e+02 Score=24.72 Aligned_cols=75 Identities=20% Similarity=0.174 Sum_probs=43.6
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhcc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~a 151 (298)
|.+|+|.++-.|-- ..+-+......|+..|+++.+++..+|. .+. -..|+.+..+.....+.....+
T Consensus 1 mm~~~v~ill~~g~---~~~e~~~~~~~l~~ag~~v~~vs~~~~~---~v~-------~~~g~~v~~d~~l~~~~~~~~~ 67 (197)
T 2rk3_A 1 MASKRALVILAKGA---EEMETVIPVDVMRRAGIKVTVAGLAGKD---PVQ-------CSRDVVICPDASLEDAKKEGPY 67 (197)
T ss_dssp -CCCEEEEEECTTC---CHHHHHHHHHHHHHTTCEEEEEETTCSS---CEE-------CTTSCEECCSEEHHHHHTTCCC
T ss_pred CCCCEEEEEECCCC---cHHHHHHHHHHHHHCCCEEEEEEcCCCC---ccc-------cCCCCEEeCCcCHHHcCCccCC
Confidence 34567776665411 2334455667889999999999865541 121 1346666655443333113689
Q ss_pred CEEEEech
Q 022363 152 DLIVLNTA 159 (298)
Q Consensus 152 DLVIaNT~ 159 (298)
|.||+=-.
T Consensus 68 D~livpGG 75 (197)
T 2rk3_A 68 DVVVLPGG 75 (197)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99987543
No 320
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=36.16 E-value=1.5e+02 Score=22.84 Aligned_cols=43 Identities=14% Similarity=0.066 Sum_probs=27.9
Q ss_pred cccEEEEEeccCCCC-Cch---HHHHHHHHHHHhCCCeEEEEe-ccCC
Q 022363 73 KSKLVLLVSHELSLS-GGP---LLLMELAFLLRGVGTKVNWIT-IQKP 115 (298)
Q Consensus 73 ~~KkILLISHELS~T-GAP---LlLleLA~~Lkq~G~~V~vL~-~~~G 115 (298)
++++|++++...... |++ -.--.|+..|.+.|..+.++- +..|
T Consensus 1 ~~~~i~~~GDSit~G~g~~~~~~~~~~l~~~l~~~~~~~~v~n~g~~G 48 (185)
T 3hp4_A 1 MDNTILILGDXLSAAYGLQQEEGWVKLLQDKYDAEQSDIVLINASISG 48 (185)
T ss_dssp -CEEEEEEECTTTTTTTSCGGGSHHHHHHHHHHHTTCCEEEEECCCTT
T ss_pred CCCeEEEECCcccccCCCCCcccHHHHHHHHHHhcCCcEEEEECCcCC
Confidence 478999999776653 322 233456778888888877775 4444
No 321
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=36.15 E-value=2.2e+02 Score=24.77 Aligned_cols=79 Identities=8% Similarity=0.143 Sum_probs=45.5
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
++||++|+. +-+| =+=.++|+.|.+.|++|+++..+.. -...+.+++...|..+. +-....+++
T Consensus 29 l~gk~vlVT----Gas~--gIG~~la~~l~~~G~~V~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~ 97 (301)
T 3tjr_A 29 FDGRAAVVT----GGAS--GIGLATATEFARRGARLVLSDVDQP-----ALEQAVNGLRGQGFDAHGVVCDVRHLDEMVR 97 (301)
T ss_dssp STTCEEEEE----TTTS--HHHHHHHHHHHHTTCEEEEEESCHH-----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred cCCCEEEEe----CCCC--HHHHHHHHHHHHCCCEEEEEECCHH-----HHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 567876664 2223 3667899999999999877663321 11233455555554432 112222232
Q ss_pred -------hhhccCEEEEechhc
Q 022363 147 -------TALKADLIVLNTAVA 161 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v~ 161 (298)
....+|.+|.|..+.
T Consensus 98 ~~~~~~~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 98 LADEAFRLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHHHHHHHSSCSEEEECCCCC
T ss_pred HHHHHHHhCCCCCEEEECCCcC
Confidence 224799999997753
No 322
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=35.98 E-value=43 Score=28.82 Aligned_cols=37 Identities=30% Similarity=0.363 Sum_probs=29.7
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 022363 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (298)
Q Consensus 69 ~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~ 108 (298)
..-++||+||+| .|.=.||+ -|.++++.|++.|...+
T Consensus 121 ~~~~~gk~VliV-DDii~TG~--Tl~~~~~~L~~~g~~~v 157 (217)
T 1z7g_A 121 LSTLTGKNVLIV-EDIIDTGK--TMQTLLSLVRQYNPKMV 157 (217)
T ss_dssp GGGGTTSEEEEE-EEECCCHH--HHHHHHHHHHTTCCSEE
T ss_pred ccccCCCEEEEE-eceeCcHH--HHHHHHHHHHhcCCCEE
Confidence 356799998887 77777888 66788999999998643
No 323
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=35.81 E-value=38 Score=29.48 Aligned_cols=35 Identities=14% Similarity=0.029 Sum_probs=28.7
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~ 108 (298)
-++||+||+| .|.=.||+ -|.++++.|++.|...+
T Consensus 100 ~v~Gk~VLLV-DDii~TG~--Tl~~a~~~L~~~Ga~~V 134 (220)
T 1tc1_A 100 SIEGHHVLIV-EDIVDTAL--TLNYLYHMYFTRRPASL 134 (220)
T ss_dssp CCTTSEEEEE-EEEESSCH--HHHHHHHHHHTTCCSEE
T ss_pred cCCCCEEEEE-eCccCcHH--HHHHHHHHHHhcCCCEE
Confidence 3689999888 77777898 67789999999997643
No 324
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=35.80 E-value=1.8e+02 Score=23.90 Aligned_cols=39 Identities=8% Similarity=-0.118 Sum_probs=24.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
++++|-+|..+.+..-..-++-.+-..+++.|+++.+..
T Consensus 6 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~ 44 (289)
T 1dbq_A 6 HTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGN 44 (289)
T ss_dssp --CEEEEEESCTTSHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCCeEEEEc
Confidence 456788888776543333345555677788899887754
No 325
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=35.79 E-value=1.2e+02 Score=26.08 Aligned_cols=81 Identities=7% Similarity=0.083 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh--------chhHHH--hhhccCEEEE--ech
Q 022363 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK--------GQETIN--TALKADLIVL--NTA 159 (298)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k--------~~~~i~--~A~~aDLVIa--NT~ 159 (298)
....++++|++.|+.=+.+.....+.+.+....+.+.+.+.|+++.... ....+. ...++|.|++ |..
T Consensus 126 ~~~~~~~~l~~~g~~~ia~i~~~~~~g~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~ 205 (368)
T 4eyg_A 126 SSIIIGDWAAKNGIKKVATLTSDYAPGNDALAFFKERFTAGGGEIVEEIKVPLANPDFAPFLQRMKDAKPDAMFVFVPAG 205 (368)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEECSSSCCCHHHHHHHHHHCCSEEEEECCTT
T ss_pred HHHHHHHHHHHcCCCEEEEEecCchHhHHHHHHHHHHHHHcCCEEEEEEeCCCCCCcHHHHHHHHHhcCCCEEEEeccch
Confidence 3445778888888764444433322233345567777888898876321 112222 2458999997 555
Q ss_pred hchHHHHHHhhcc
Q 022363 160 VAGKWLDAVLKED 172 (298)
Q Consensus 160 v~g~wl~~l~~~~ 172 (298)
.+...++++.+..
T Consensus 206 ~a~~~~~~~~~~g 218 (368)
T 4eyg_A 206 QGGNFMKQFAERG 218 (368)
T ss_dssp CHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 6677888876443
No 326
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=35.74 E-value=22 Score=30.16 Aligned_cols=69 Identities=23% Similarity=0.274 Sum_probs=40.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-hh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TA 148 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~-~A 148 (298)
|++|+||+++ .+. +=-++++.|.+.|++|..+...... +..++..+.. .....+. ..
T Consensus 1 M~~~~ilVtG--aG~-----iG~~l~~~L~~~g~~V~~~~r~~~~-------------~~~~~~~~~~Dl~d~~~~~~~~ 60 (286)
T 3gpi_A 1 MSLSKILIAG--CGD-----LGLELARRLTAQGHEVTGLRRSAQP-------------MPAGVQTLIADVTRPDTLASIV 60 (286)
T ss_dssp -CCCCEEEEC--CSH-----HHHHHHHHHHHTTCCEEEEECTTSC-------------CCTTCCEEECCTTCGGGCTTGG
T ss_pred CCCCcEEEEC--CCH-----HHHHHHHHHHHCCCEEEEEeCCccc-------------cccCCceEEccCCChHHHHHhh
Confidence 5677888774 233 4447788899999999999855321 1234444421 1222232 22
Q ss_pred h-ccCEEEEechh
Q 022363 149 L-KADLIVLNTAV 160 (298)
Q Consensus 149 ~-~aDLVIaNT~v 160 (298)
. ++|.||-+...
T Consensus 61 ~~~~d~vih~a~~ 73 (286)
T 3gpi_A 61 HLRPEILVYCVAA 73 (286)
T ss_dssp GGCCSEEEECHHH
T ss_pred cCCCCEEEEeCCC
Confidence 3 48998877654
No 327
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=35.72 E-value=1.6e+02 Score=25.21 Aligned_cols=36 Identities=11% Similarity=0.031 Sum_probs=25.1
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
-++||++|+.. |+-=+=.++|+.|.+.|+.|.++..
T Consensus 24 ~l~gk~vlVTG------as~gIG~aia~~la~~G~~V~~~~r 59 (266)
T 3grp_A 24 KLTGRKALVTG------ATGGIGEAIARCFHAQGAIVGLHGT 59 (266)
T ss_dssp CCTTCEEEESS------TTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEeC------CCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 36788766532 2233557899999999999887763
No 328
>1oao_A CODH, carbon monoxide dehydrogenase/acetyl-COA synthase beta; oxidoreductase-transferase complex, electron transfer, oxidoreductase; 1.90A {Moorella thermoacetica} SCOP: e.26.1.2 PDB: 1mjg_A 2z8y_A 3i01_A 3i04_A
Probab=35.60 E-value=53 Score=34.10 Aligned_cols=74 Identities=14% Similarity=0.240 Sum_probs=53.9
Q ss_pred cccccc--ccEEEEEeccCCCCCchHHHHHHHHHHH----------hCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCc
Q 022363 68 PLSFMK--SKLVLLVSHELSLSGGPLLLMELAFLLR----------GVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQ 135 (298)
Q Consensus 68 ~~~f~~--~KkILLISHELS~TGAPLlLleLA~~Lk----------q~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~ 135 (298)
+++-++ ++.||+..|| |..+-+|.+..+ ..|++|.=+++-++ +-+-++|+|
T Consensus 267 nlGv~~~d~~nIlV~GHd------~~~~e~ll~~tee~~~~Ak~~GakGInvyG~CCT~~-----------EmL~~hg~p 329 (674)
T 1oao_A 267 NMGVLDPDQVNFVLHGHN------PLLSEIIVQAAREMEGEAKAAGAKGINLVGICCTGN-----------EVLMRQGIP 329 (674)
T ss_dssp SGGGCCTTSEEEEEESSC------HHHHHHHHHHHHHTHHHHHHTTCSCEEEEEEHHHHH-----------HHHHHHCCC
T ss_pred CCcccCCCCCEEEEECCC------cHHHHHHHHHHHHHHHHHHhcCCCccEEEeeeccHH-----------HHhhhcCCC
Confidence 455566 8999999998 567777778777 66777877776654 224445999
Q ss_pred eeehhchhHHHhhh-ccCEEEEec
Q 022363 136 VISAKGQETINTAL-KADLIVLNT 158 (298)
Q Consensus 136 v~~~k~~~~i~~A~-~aDLVIaNT 158 (298)
..-..+++++.... -.|+|++.|
T Consensus 330 l~GN~~~qE~~~~tGavDaiv~d~ 353 (674)
T 1oao_A 330 LVTSFASQELAICTGAIDAMCVDV 353 (674)
T ss_dssp EEECGGGHHHHHTTSCCSEEEECS
T ss_pred cCCchHHHHHhhcCCCCceEEEEC
Confidence 98888888776444 558888755
No 329
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=35.45 E-value=66 Score=32.62 Aligned_cols=53 Identities=21% Similarity=0.271 Sum_probs=38.6
Q ss_pred ccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee
Q 022363 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI 137 (298)
Q Consensus 68 ~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~ 137 (298)
.|-|+-..+-+|||= -+-+| +.++|+.|.+.|+++.-.. +..+-|.+.||++.
T Consensus 17 ~~~~~~~i~raLISV-~DK~g----lv~~Ak~L~~lGfeI~ATg------------GTak~L~e~GI~v~ 69 (534)
T 4ehi_A 17 NLYFQSNAMRALLSV-SDKEG----IVEFGKELENLGFEILSTG------------GTFKLLKENGIKVI 69 (534)
T ss_dssp GEEECTTCCEEEEEE-SSCTT----HHHHHHHHHHTTCEEEECH------------HHHHHHHHTTCCCE
T ss_pred eeeeccCCcEEEEEE-ccccc----HHHHHHHHHHCCCEEEEcc------------HHHHHHHHCCCcee
Confidence 567777777677776 35666 6899999999999986433 33566777788865
No 330
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=35.41 E-value=1e+02 Score=22.78 Aligned_cols=23 Identities=4% Similarity=0.157 Sum_probs=14.8
Q ss_pred HHHHH-HHH-HhCCCeEEEEeccCC
Q 022363 93 LMELA-FLL-RGVGTKVNWITIQKP 115 (298)
Q Consensus 93 LleLA-~~L-kq~G~~V~vL~~~~G 115 (298)
.++.| .+. +..|.++.++....+
T Consensus 17 al~~a~~la~~~~~a~l~ll~v~~~ 41 (138)
T 3idf_A 17 AAQYILDMFGKDADCTLTLIHVKPE 41 (138)
T ss_dssp HHHHHHHHHTTCTTEEEEEEEEECC
T ss_pred HHHHHHHHhccCCCCEEEEEEEecC
Confidence 34444 555 567999988885444
No 331
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=35.36 E-value=43 Score=23.02 Aligned_cols=38 Identities=21% Similarity=0.298 Sum_probs=28.4
Q ss_pred cCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEEecccCh
Q 022363 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSMNF 281 (298)
Q Consensus 238 ~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~~~sv~~ 281 (298)
+.+++.-+ .+.+. +-+.+.+.+|+|++|+.| .|.-+.+
T Consensus 10 Grs~eqk~----~L~~~-it~~~~~~lg~p~~~v~V-~i~e~~~ 47 (65)
T 3ry0_A 10 GRSPQEVA----ALGEA-LTAAAHETLGTPVEAVRV-IVEETPP 47 (65)
T ss_dssp CCCHHHHH----HHHHH-HHHHHHHHHCCCGGGCEE-EEEEECG
T ss_pred CCCHHHHH----HHHHH-HHHHHHHHhCcCcccEEE-EEEEcCH
Confidence 56777766 88888 888899999999988765 4444444
No 332
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=35.20 E-value=1.2e+02 Score=25.64 Aligned_cols=80 Identities=14% Similarity=0.013 Sum_probs=43.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
+++|+||+.. |+-=+=.++|+.|.+.|++|.++..+..+ . ...+.+++.+.+..+. +-...++++
T Consensus 24 l~~k~vlVTG------as~gIG~~la~~l~~~G~~v~i~~~r~~~---~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~ 93 (267)
T 4iiu_A 24 AMSRSVLVTG------ASKGIGRAIARQLAADGFNIGVHYHRDAA---G-AQETLNAIVANGGNGRLLSFDVANREQCRE 93 (267)
T ss_dssp -CCCEEEETT------TTSHHHHHHHHHHHHTTCEEEEEESSCHH---H-HHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred cCCCEEEEEC------CCChHHHHHHHHHHHCCCEEEEEeCCchH---H-HHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence 4567655532 22225578999999999999888755431 1 1123344444433322 112222222
Q ss_pred -------hhhccCEEEEechhc
Q 022363 147 -------TALKADLIVLNTAVA 161 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v~ 161 (298)
.....|.||.|..+.
T Consensus 94 ~~~~~~~~~g~id~li~nAg~~ 115 (267)
T 4iiu_A 94 VLEHEIAQHGAWYGVVSNAGIA 115 (267)
T ss_dssp HHHHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHHHhCCccEEEECCCCC
Confidence 234899999987653
No 333
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=35.17 E-value=2e+02 Score=24.20 Aligned_cols=80 Identities=14% Similarity=0.189 Sum_probs=46.0
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHH
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETI 145 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i 145 (298)
..++||++|+.. -+|+ +=.++|+.|.+.|++|.++... . +-...+.+++.+.|..+. +-...+++
T Consensus 7 ~~l~~k~vlVTG----as~g--IG~aia~~l~~~G~~V~~~~r~-~----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 75 (264)
T 3ucx_A 7 GLLTDKVVVISG----VGPA--LGTTLARRCAEQGADLVLAART-V----ERLEDVAKQVTDTGRRALSVGTDITDDAQV 75 (264)
T ss_dssp CTTTTCEEEEES----CCTT--HHHHHHHHHHHTTCEEEEEESC-H----HHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred CCcCCcEEEEEC----CCcH--HHHHHHHHHHHCcCEEEEEeCC-H----HHHHHHHHHHHhcCCcEEEEEcCCCCHHHH
Confidence 457888777654 2222 5568899999999998776532 1 111233455555554433 11222223
Q ss_pred H--------hhhccCEEEEechh
Q 022363 146 N--------TALKADLIVLNTAV 160 (298)
Q Consensus 146 ~--------~A~~aDLVIaNT~v 160 (298)
+ .....|.+|.|...
T Consensus 76 ~~~~~~~~~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 76 AHLVDETMKAYGRVDVVINNAFR 98 (264)
T ss_dssp HHHHHHHHHHTSCCSEEEECCCS
T ss_pred HHHHHHHHHHcCCCcEEEECCCC
Confidence 2 23478999999754
No 334
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=35.11 E-value=1.3e+02 Score=25.51 Aligned_cols=82 Identities=15% Similarity=0.116 Sum_probs=46.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee---h-hchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS---A-KGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~---~-k~~~~i~- 146 (298)
++||.+|+.. -+| =+=.++|+.|.+.|+.|.++..... ..+-...+.+++...|.++.. | ...++++
T Consensus 9 l~~k~vlVTG----as~--GIG~aia~~la~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 80 (262)
T 3ksu_A 9 LKNKVIVIAG----GIK--NLGALTAKTFALESVNLVLHYHQAK--DSDTANKLKDELEDQGAKVALYQSDLSNEEEVAK 80 (262)
T ss_dssp CTTCEEEEET----CSS--HHHHHHHHHHTTSSCEEEEEESCGG--GHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHH
T ss_pred CCCCEEEEEC----CCc--hHHHHHHHHHHHCCCEEEEEecCcc--CHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 5677666543 222 2557899999999999888753221 112222344555555544431 1 2222222
Q ss_pred -------hhhccCEEEEechhc
Q 022363 147 -------TALKADLIVLNTAVA 161 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v~ 161 (298)
.....|.+|.|..+.
T Consensus 81 ~~~~~~~~~g~iD~lvnnAg~~ 102 (262)
T 3ksu_A 81 LFDFAEKEFGKVDIAINTVGKV 102 (262)
T ss_dssp HHHHHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 224789999987653
No 335
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=35.10 E-value=64 Score=27.05 Aligned_cols=39 Identities=15% Similarity=0.139 Sum_probs=30.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS 116 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~ 116 (298)
+.-+++||+ +|-.--++++++..|+.|..++.+++..++
T Consensus 115 ~Dvvi~iS~----SG~t~~~~~~~~~ak~~g~~vi~iT~~~~s 153 (201)
T 3trj_A 115 DDILLVITT----SGDSENILSAVEEAHDLEMKVIALTGGSGG 153 (201)
T ss_dssp TCEEEEECS----SSCCHHHHHHHHHHHHTTCEEEEEEETTCC
T ss_pred CCEEEEEeC----CCCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 444555554 777778899999999999999999977653
No 336
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=35.07 E-value=1.1e+02 Score=25.98 Aligned_cols=80 Identities=19% Similarity=0.163 Sum_probs=46.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
++||++|+.. |+.=+=.++|+.|.+.|++|.++..+.. +-...+.+++.+.|..+. +-...++++
T Consensus 16 l~~k~~lVTG------as~gIG~aia~~l~~~G~~V~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 85 (270)
T 3is3_A 16 LDGKVALVTG------SGRGIGAAVAVHLGRLGAKVVVNYANST----KDAEKVVSEIKALGSDAIAIKADIRQVPEIVK 85 (270)
T ss_dssp CTTCEEEESC------TTSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred cCCCEEEEEC------CCchHHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 6788766532 2223556889999999999988775432 111234555555554433 112222222
Q ss_pred -------hhhccCEEEEechhc
Q 022363 147 -------TALKADLIVLNTAVA 161 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v~ 161 (298)
.....|.+|.|..+.
T Consensus 86 ~~~~~~~~~g~id~lvnnAg~~ 107 (270)
T 3is3_A 86 LFDQAVAHFGHLDIAVSNSGVV 107 (270)
T ss_dssp HHHHHHHHHSCCCEEECCCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 234789999887753
No 337
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=34.94 E-value=1.2e+02 Score=26.65 Aligned_cols=82 Identities=16% Similarity=0.195 Sum_probs=46.9
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhC--CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee--hh-c------hh
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--AK-G------QE 143 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~--G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~--~k-~------~~ 143 (298)
|-++|+|.. |. -|-.|....++- ..+|+++.+++++. +..+...+.|||++. .+ . .+
T Consensus 4 riavl~Sg~----Gs--nl~ali~~~~~~~l~~eI~~Visn~~~a------~v~~~A~~~gIp~~~~~~~~~~~r~~~d~ 71 (211)
T 3p9x_A 4 RVAIFASGS----GT--NAEAIIQSQKAGQLPCEVALLITDKPGA------KVVERVKVHEIPVCALDPKTYPSKEAYEI 71 (211)
T ss_dssp EEEEECCTT----CH--HHHHHHHHHHTTCCSSEEEEEEESCSSS------HHHHHHHTTTCCEEECCGGGSSSHHHHHH
T ss_pred EEEEEEeCC----ch--HHHHHHHHHHcCCCCcEEEEEEECCCCc------HHHHHHHHcCCCEEEeChhhcCchhhhHH
Confidence 556777763 43 345555555442 35777777665431 456778888999862 21 1 12
Q ss_pred HH-H--hhhccCEEEEec---hhchHHHHHH
Q 022363 144 TI-N--TALKADLIVLNT---AVAGKWLDAV 168 (298)
Q Consensus 144 ~i-~--~A~~aDLVIaNT---~v~g~wl~~l 168 (298)
++ + ...++|+||+-. ++....++.+
T Consensus 72 ~~~~~l~~~~~Dliv~agy~~Il~~~~l~~~ 102 (211)
T 3p9x_A 72 EVVQQLKEKQIDFVVLAGYMRLVGPTLLGAY 102 (211)
T ss_dssp HHHHHHHHTTCCEEEESSCCSCCCHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEeCchhhcCHHHHhhc
Confidence 22 2 356899999743 4444555543
No 338
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=34.69 E-value=1.6e+02 Score=25.84 Aligned_cols=71 Identities=15% Similarity=0.243 Sum_probs=42.7
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHh-CCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--h-------chhH
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--K-------GQET 144 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq-~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k-------~~~~ 144 (298)
|.++|+|-. | --|-.|....++ .+++|+.+.+++++. ++ .+...+.|||++.- + ..++
T Consensus 7 riavl~SG~----G--snl~all~~~~~~~~~eI~~Vis~~~~a-----~~-~~~A~~~gIp~~~~~~~~~~~r~~~d~~ 74 (215)
T 3tqr_A 7 PIVVLISGN----G--TNLQAIIGAIQKGLAIEIRAVISNRADA-----YG-LKRAQQADIPTHIIPHEEFPSRTDFEST 74 (215)
T ss_dssp EEEEEESSC----C--HHHHHHHHHHHTTCSEEEEEEEESCTTC-----HH-HHHHHHTTCCEEECCGGGSSSHHHHHHH
T ss_pred EEEEEEeCC----c--HHHHHHHHHHHcCCCCEEEEEEeCCcch-----HH-HHHHHHcCCCEEEeCccccCchhHhHHH
Confidence 445777643 3 356667766665 367888777665432 11 35677889999751 1 1222
Q ss_pred H-H--hhhccCEEEEe
Q 022363 145 I-N--TALKADLIVLN 157 (298)
Q Consensus 145 i-~--~A~~aDLVIaN 157 (298)
+ + ...++|+|++-
T Consensus 75 ~~~~l~~~~~Dliv~a 90 (215)
T 3tqr_A 75 LQKTIDHYDPKLIVLA 90 (215)
T ss_dssp HHHHHHTTCCSEEEES
T ss_pred HHHHHHhcCCCEEEEc
Confidence 2 2 35689999974
No 339
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=34.56 E-value=82 Score=26.07 Aligned_cols=39 Identities=10% Similarity=0.166 Sum_probs=21.9
Q ss_pred cccEEEEEeccCCCCCchH---HHHHHHHHHHhCCCeEEEEec
Q 022363 73 KSKLVLLVSHELSLSGGPL---LLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPL---lLleLA~~Lkq~G~~V~vL~~ 112 (298)
++++|-+|..+.+. +.|. ++-.+...+++.|+++.+...
T Consensus 4 ~~~~Ig~v~~~~~~-~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 45 (289)
T 3brs_A 4 KQYYMICIPKVLDD-SSDFWSVLVEGAQMAAKEYEIKLEFMAP 45 (289)
T ss_dssp -CCEEEEECSCCCS-SSHHHHHHHHHHHHHHHHHTCEEEECCC
T ss_pred CCcEEEEEeCCCCC-CchHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 35667777765541 1332 334445667777888776553
No 340
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=34.55 E-value=2.1e+02 Score=24.27 Aligned_cols=81 Identities=20% Similarity=0.127 Sum_probs=44.5
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN 146 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~ 146 (298)
-++||++|+.. -+| =+=.++|+.|.+.|++|.++..+.. +....+.+++.+.|.++. +-...+.+.
T Consensus 26 ~~~~k~vlVTG----as~--gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 95 (283)
T 1g0o_A 26 SLEGKVALVTG----AGR--GIGREMAMELGRRGCKVIVNYANST----ESAEEVVAAIKKNGSDAACVKANVGVVEDIV 95 (283)
T ss_dssp CCTTCEEEETT----TTS--HHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCCCEEEEeC----CCc--HHHHHHHHHHHHCCCEEEEEeCCch----HHHHHHHHHHHHhCCCeEEEEcCCCCHHHHH
Confidence 36788765532 222 2557899999999999888764321 111122344544453332 112222222
Q ss_pred --------hhhccCEEEEechhc
Q 022363 147 --------TALKADLIVLNTAVA 161 (298)
Q Consensus 147 --------~A~~aDLVIaNT~v~ 161 (298)
.....|.+|.|..+.
T Consensus 96 ~~~~~~~~~~g~iD~lv~~Ag~~ 118 (283)
T 1g0o_A 96 RMFEEAVKIFGKLDIVCSNSGVV 118 (283)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCcC
Confidence 234789999997653
No 341
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=34.52 E-value=87 Score=28.25 Aligned_cols=39 Identities=18% Similarity=0.215 Sum_probs=27.2
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCC-CeEEEEec
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVG-TKVNWITI 112 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G-~~V~vL~~ 112 (298)
+..|||+|+-.-+-- -|-..-.|++.|.+.| ++|.+...
T Consensus 3 ~~~kvLiv~G~~~H~-~~~~~~~l~~~l~~~g~f~V~~~~d 42 (281)
T 4e5v_A 3 KPIKTLLITGQNNHN-WQVSHVVLKQILENSGRFDVDFVIS 42 (281)
T ss_dssp CCEEEEEEESCCSSC-HHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CceEEEEEcCCCCCC-hHHHHHHHHHHHHhcCCEEEEEEeC
Confidence 446889986544222 4555567788999999 89888863
No 342
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=34.18 E-value=56 Score=21.87 Aligned_cols=33 Identities=24% Similarity=0.366 Sum_probs=25.0
Q ss_pred cCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEE
Q 022363 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (298)
Q Consensus 238 ~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~ 275 (298)
+.+++.-+ .+.++ +-+.+.+.+|+|++++.|..
T Consensus 11 g~s~eqk~----~l~~~-lt~~l~~~lg~~~~~v~V~i 43 (64)
T 3abf_A 11 GRPPEKKR----ELVRR-LTEMASRLLGEPYEEVRVIL 43 (64)
T ss_dssp TCCHHHHH----HHHHH-HHHHHHHHTTCCGGGEEEEE
T ss_pred CCCHHHHH----HHHHH-HHHHHHHHhCCCcccEEEEE
Confidence 34555555 77777 77888999999999988754
No 343
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=34.16 E-value=64 Score=23.24 Aligned_cols=39 Identities=21% Similarity=0.359 Sum_probs=29.5
Q ss_pred cCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEEecccChh
Q 022363 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSMNFL 282 (298)
Q Consensus 238 ~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~~~sv~~~ 282 (298)
+.+++.-+ .+.+. +-+.+.+.+|+|++|+-| .|.-+.|+
T Consensus 11 Grs~eqK~----~L~~~-it~~l~~~lg~p~~~v~V-~i~E~~~~ 49 (76)
T 3ej9_A 11 GRTDEQKR----ALSAG-LLRVISEATGEPRENIFF-VIREGSGI 49 (76)
T ss_dssp TCCHHHHH----HHHHH-HHHHHHHHHCCCGGGCEE-EEEEECGG
T ss_pred CCCHHHHH----HHHHH-HHHHHHHHHCcCcccEEE-EEEEeCHH
Confidence 56777777 88888 888899999999999754 45555443
No 344
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=34.06 E-value=65 Score=22.08 Aligned_cols=39 Identities=13% Similarity=0.100 Sum_probs=28.1
Q ss_pred cCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEEecccChh
Q 022363 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSMNFL 282 (298)
Q Consensus 238 ~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~~~sv~~~ 282 (298)
+.+++.-+ .+.+. +-+.+.+.+|+|++|+.| .|.-+.++
T Consensus 9 grt~eqK~----~L~~~-it~~~~~~lg~~~~~v~V-~i~E~~~~ 47 (62)
T 3m20_A 9 KLDVGKKR----EFVER-LTSVAAEIYGMDRSAITI-LIHEPPAE 47 (62)
T ss_dssp CCCHHHHH----HHHHH-HHHHHHHHHTCCTTSCEE-EEECCCGG
T ss_pred CCCHHHHH----HHHHH-HHHHHHHHhCcCcceEEE-EEEEeCHH
Confidence 45666655 77777 778899999999999854 45555543
No 345
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=33.94 E-value=67 Score=23.43 Aligned_cols=38 Identities=24% Similarity=0.097 Sum_probs=26.6
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEE
Q 022363 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNW 109 (298)
Q Consensus 66 ~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~v 109 (298)
+.|-...++++||+|..| |...-.+...|.+.|++|..
T Consensus 10 ~~~~~~~~~~~ilivdd~------~~~~~~l~~~L~~~g~~v~~ 47 (137)
T 2pln_A 10 HGSLVPRGSMRVLLIEKN------SVLGGEIEKGLNVKGFMADV 47 (137)
T ss_dssp -----CTTCSEEEEECSC------HHHHHHHHHHHHHTTCEEEE
T ss_pred cCcccCCCCCeEEEEeCC------HHHHHHHHHHHHHcCcEEEE
Confidence 344555678889999876 56777888999999998763
No 346
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=33.91 E-value=1.4e+02 Score=24.83 Aligned_cols=87 Identities=11% Similarity=0.001 Sum_probs=47.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhccC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKAD 152 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~aD 152 (298)
++++|-+|..+.+..--.-++-.+-..+++.|+++.+.......+ .+- +.+. .+.+ ...++|
T Consensus 4 ~~~~Igvi~~~~~~~~~~~~~~g~~~~a~~~g~~~~~~~~~~~~~-~~~----~~~~------------~~~~-~~~~vd 65 (304)
T 3o1i_D 4 SDEKICAIYPHLKDSYWLSVNYGMVSEAEKQGVNLRVLEAGGYPN-KSR----QEQQ------------LALC-TQWGAN 65 (304)
T ss_dssp -CCEEEEEESCSCSHHHHHHHHHHHHHHHHHTCEEEEEECSSTTC-HHH----HHHH------------HHHH-HHHTCS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCeEEEEcCCCCCC-HHH----HHHH------------HHHH-HHcCCC
Confidence 456777777766543333445556677788898888877543110 011 0011 1111 246889
Q ss_pred EEEEechhc---hHHHHHHhhccCCCCCCceEEE
Q 022363 153 LIVLNTAVA---GKWLDAVLKEDVPRVLPNVLWW 183 (298)
Q Consensus 153 LVIaNT~v~---g~wl~~l~~~~~p~~~~pVIWW 183 (298)
.||+...-. ...++.+. .++ |||..
T Consensus 66 giii~~~~~~~~~~~~~~~~-~~i-----PvV~~ 93 (304)
T 3o1i_D 66 AIILGTVDPHAYEHNLKSWV-GNT-----PVFAT 93 (304)
T ss_dssp EEEECCSSTTSSTTTHHHHT-TTS-----CEEEC
T ss_pred EEEEeCCChhHHHHHHHHHc-CCC-----CEEEe
Confidence 888776543 35566664 455 66665
No 347
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=33.89 E-value=2.2e+02 Score=24.14 Aligned_cols=38 Identities=13% Similarity=0.021 Sum_probs=26.4
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
.-++||++|+.. -+| =+=.++|+.|.+.|++|+++...
T Consensus 6 ~~l~~k~~lVTG----as~--gIG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 6 ADFEGKTALITG----GAR--GMGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp CTTTTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCEEEEeC----CCc--hHHHHHHHHHHHCCCeEEEEeCC
Confidence 346788766653 222 25568999999999998877643
No 348
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=33.84 E-value=54 Score=26.04 Aligned_cols=78 Identities=14% Similarity=0.047 Sum_probs=39.5
Q ss_pred ccccEEEEEe-ccCCCCCchHHHHHHHHHHHhCCCeEEEEe-ccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHHh
Q 022363 72 MKSKLVLLVS-HELSLSGGPLLLMELAFLLRGVGTKVNWIT-IQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETINT 147 (298)
Q Consensus 72 ~~~KkILLIS-HELS~TGAPLlLleLA~~Lkq~G~~V~vL~-~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~~ 147 (298)
|..|+||||. |+.-|+ |+.= -+++.+. |..+.+-+ |-.+ . .+-+.-.+-+.++||..-.. +..... .
T Consensus 1 M~~~~VLFVC~gN~cRS--pmAE-a~~~~~~--~~~~~v~SAGt~~--~-~~~p~a~~~l~~~Gid~s~~~ar~l~~~-~ 71 (131)
T 1jf8_A 1 MDKKTIYFISTGNSARS--QMAE-GWGKEIL--GEGWNVYSAGIET--H-GVNPKAIEAMKEVDIDISNHTSDLIDND-I 71 (131)
T ss_dssp -CCEEEEEEESSSSSHH--HHHH-HHHHHHS--TTTEEEEEEESSC--C-CCCHHHHHHHHHTTCCCTTCCCCBCCHH-H
T ss_pred CCCCEEEEEcCCcchHH--HHHH-HHHHHhc--CCCEEEEcCcCCC--C-CCCHHHHHHHHHcCCCcccCccccCChH-H
Confidence 4457899994 454444 3221 1222222 23344444 2222 1 33344556777779987532 222222 2
Q ss_pred hhccCEEEEec
Q 022363 148 ALKADLIVLNT 158 (298)
Q Consensus 148 A~~aDLVIaNT 158 (298)
...+|+||+=+
T Consensus 72 ~~~~D~Ii~m~ 82 (131)
T 1jf8_A 72 LKQSDLVVTLC 82 (131)
T ss_dssp HHHCSEEEECS
T ss_pred hccCCEEEEcC
Confidence 56899999764
No 349
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=33.79 E-value=43 Score=28.67 Aligned_cols=35 Identities=14% Similarity=0.090 Sum_probs=28.5
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~ 108 (298)
-++||+||+| .|.=.||+ -|.++++.|++.|...+
T Consensus 115 ~v~gk~VllV-DDvi~TG~--Tl~aa~~~L~~~Ga~~V 149 (211)
T 1pzm_A 115 SVENRHIMLV-EDIVDSAI--TLQYLMRFMLAKKPASL 149 (211)
T ss_dssp CCTTCEEEEE-EEEESSCH--HHHHHHHHHHTTCCSEE
T ss_pred CCCCCEEEEE-CCccccHH--HHHHHHHHHHhcCCCEE
Confidence 4689998888 67777898 67789999999998743
No 350
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=33.75 E-value=1.5e+02 Score=24.92 Aligned_cols=34 Identities=15% Similarity=0.074 Sum_probs=24.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
++||++|+.. |+-=+=.++|+.|.+.|++|.++.
T Consensus 6 l~~k~vlVTG------as~gIG~~ia~~l~~~G~~V~~~~ 39 (259)
T 4e6p_A 6 LEGKSALITG------SARGIGRAFAEAYVREGATVAIAD 39 (259)
T ss_dssp TTTCEEEEET------CSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEEC------CCcHHHHHHHHHHHHCCCEEEEEe
Confidence 4677766653 222355688999999999987765
No 351
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=33.73 E-value=2.2e+02 Score=24.17 Aligned_cols=37 Identities=14% Similarity=0.052 Sum_probs=25.9
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
-++||.+|+.. |+.=+=.++|+.|.+.|+.|+++...
T Consensus 8 ~l~~k~~lVTG------as~gIG~aia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 8 RVEGKVAFVTG------AARGQGRSHAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp TTTTCEEEEES------TTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEeC------CCchHHHHHHHHHHHCCCeEEEEecc
Confidence 35778666643 22235578999999999999887643
No 352
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=33.71 E-value=1.3e+02 Score=25.18 Aligned_cols=34 Identities=18% Similarity=0.096 Sum_probs=24.3
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
++||++|+.. |+-=+=.++|+.|.+.|++|.++.
T Consensus 4 l~gk~vlVTG------as~gIG~a~a~~l~~~G~~V~~~~ 37 (247)
T 3rwb_A 4 LAGKTALVTG------AAQGIGKAIAARLAADGATVIVSD 37 (247)
T ss_dssp TTTCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCCCEEEEEC------CCCHHHHHHHHHHHHCCCEEEEEe
Confidence 6788777643 222355689999999999987765
No 353
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=33.42 E-value=78 Score=25.21 Aligned_cols=39 Identities=21% Similarity=0.263 Sum_probs=30.9
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (298)
++--+++||+ +|-.--..+.++..|+.|..+..+++..+
T Consensus 82 ~~d~vi~iS~----sG~t~~~~~~~~~ak~~g~~vi~IT~~~~ 120 (180)
T 1jeo_A 82 KDDLLILISG----SGRTESVLTVAKKAKNINNNIIAIVCECG 120 (180)
T ss_dssp TTCEEEEEES----SSCCHHHHHHHHHHHTTCSCEEEEESSCC
T ss_pred CCCEEEEEeC----CCCcHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 4556778876 45556788999999999999999996653
No 354
>1zcz_A Bifunctional purine biosynthesis protein PURH; TM1249; HET: PG4; 1.88A {Thermotoga maritima} SCOP: c.24.1.3 c.97.1.4
Probab=33.42 E-value=35 Score=34.02 Aligned_cols=46 Identities=13% Similarity=0.102 Sum_probs=33.6
Q ss_pred EEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 77 VLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 77 ILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
..||| ..+-+| +.++|+.|.+.|++..--. +..+.+.+.||+|.+-
T Consensus 15 ~aliS-V~DK~g----l~~~A~~L~~~G~eiisTg------------GTak~L~~~Gi~v~~V 60 (464)
T 1zcz_A 15 RILVS-LYEKEK----YLDILRELHEKGWEIWASS------------GTAKFLKSNGIEANDV 60 (464)
T ss_dssp EEEEE-CSSTGG----GHHHHHHHHHTTCEEEECH------------HHHHHHHHTTCCCEEG
T ss_pred EEEEE-ecCccC----HHHHHHHHHHCCCEEEECc------------hHHHHHHHCCCceEEH
Confidence 44555 345667 7899999999999865332 4467888889999865
No 355
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=33.34 E-value=1.2e+02 Score=25.48 Aligned_cols=38 Identities=11% Similarity=0.210 Sum_probs=24.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
+++|++|+.. -++.-=+=.++|+.|.+.|++|.++...
T Consensus 7 l~~k~vlVTG----as~~~gIG~~ia~~l~~~G~~V~~~~r~ 44 (265)
T 1qsg_A 7 LSGKRILVTG----VASKLSIAYGIAQAMHREGAELAFTYQN 44 (265)
T ss_dssp TTTCEEEECC----CCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCEEEEEC----CCCCCCHHHHHHHHHHHCCCEEEEEcCc
Confidence 5677666532 1100125568899999999998887643
No 356
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=33.33 E-value=65 Score=28.95 Aligned_cols=36 Identities=28% Similarity=0.323 Sum_probs=28.3
Q ss_pred EEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 76 LVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 76 kILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
+||+++. ...|-=.-++.||+.|++.|++|.+++..
T Consensus 2 ~Il~~~~--~~~GHv~P~l~la~~L~~~Gh~V~~~~~~ 37 (415)
T 1iir_A 2 RVLLATC--GSRGDTEPLVALAVRVRDLGADVRMCAPP 37 (415)
T ss_dssp EEEEECC--SCHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred eEEEEcC--CCchhHHHHHHHHHHHHHCCCeEEEEcCH
Confidence 5777753 33466667899999999999999999844
No 357
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=33.18 E-value=2.1e+02 Score=23.78 Aligned_cols=40 Identities=8% Similarity=0.082 Sum_probs=25.0
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
++++|-+|..+.+..--.-++-.+...+++.|+++.+...
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~ 46 (285)
T 3c3k_A 7 KTGMLLVMVSNIANPFCAAVVKGIEKTAEKNGYRILLCNT 46 (285)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 4567878777654322223445556778888998877653
No 358
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=33.15 E-value=2.1e+02 Score=24.49 Aligned_cols=78 Identities=13% Similarity=0.162 Sum_probs=44.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee---h-hchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS---A-KGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~---~-k~~~~i~- 146 (298)
++||++|+.. |+-=+=.++|+.|.+.|++|.++. +... ...+.+++.+.|.++.. | ...+.+.
T Consensus 29 l~gk~~lVTG------as~GIG~aia~~la~~G~~V~~~~-r~~~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 96 (273)
T 3uf0_A 29 LAGRTAVVTG------AGSGIGRAIAHGYARAGAHVLAWG-RTDG-----VKEVADEIADGGGSAEAVVADLADLEGAAN 96 (273)
T ss_dssp CTTCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEE-SSTH-----HHHHHHHHHTTTCEEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeC------CCcHHHHHHHHHHHHCCCEEEEEc-CHHH-----HHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence 5788766642 222355689999999999988776 3221 11234455554443321 1 1122221
Q ss_pred ------hhhccCEEEEechhc
Q 022363 147 ------TALKADLIVLNTAVA 161 (298)
Q Consensus 147 ------~A~~aDLVIaNT~v~ 161 (298)
....+|.+|.|..+.
T Consensus 97 ~~~~~~~~g~iD~lv~nAg~~ 117 (273)
T 3uf0_A 97 VAEELAATRRVDVLVNNAGII 117 (273)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHhcCCCcEEEECCCCC
Confidence 234899999997653
No 359
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=33.08 E-value=1.5e+02 Score=24.93 Aligned_cols=79 Identities=13% Similarity=0.083 Sum_probs=43.6
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-hhhcc
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TALKA 151 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~-~A~~a 151 (298)
|+||++. -||. +=-++++.|.+.|++|.++.........+-... .+.+...|+.++.. ....++. .+.++
T Consensus 5 ~~ilVtG----atG~--iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 77 (313)
T 1qyd_A 5 SRVLIVG----GTGY--IGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFKQLGAKLIEASLDDHQRLVDALKQV 77 (313)
T ss_dssp CCEEEES----TTST--THHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHHTTTCEEECCCSSCHHHHHHHHTTC
T ss_pred CEEEEEc----CCcH--HHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHHhCCeEEEeCCCCCHHHHHHHHhCC
Confidence 5566553 2333 334677888888999988875432110111001 12234557776632 2334454 45689
Q ss_pred CEEEEechh
Q 022363 152 DLIVLNTAV 160 (298)
Q Consensus 152 DLVIaNT~v 160 (298)
|.||.++..
T Consensus 78 d~vi~~a~~ 86 (313)
T 1qyd_A 78 DVVISALAG 86 (313)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999988764
No 360
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=33.04 E-value=2.1e+02 Score=26.44 Aligned_cols=81 Identities=16% Similarity=0.102 Sum_probs=49.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--eehhchhHHHhhh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--ISAKGQETINTAL 149 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v--~~~k~~~~i~~A~ 149 (298)
.+|++|.+|..--| =+.-.++..+...|.+|.+.+-++=...+++..-+++...+.|..+ ..+ . -+...
T Consensus 146 l~gl~va~vGD~~~-----rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d--~--~eav~ 216 (307)
T 2i6u_A 146 LRGLRLSYFGDGAN-----NMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTAD--A--HAAAA 216 (307)
T ss_dssp CTTCEEEEESCTTS-----HHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESC--H--HHHHT
T ss_pred cCCeEEEEECCCCc-----CcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEEC--H--HHHhc
Confidence 57999999987313 3455666667677999999884332223334333333344667554 333 1 12467
Q ss_pred ccCEEEEechhc
Q 022363 150 KADLIVLNTAVA 161 (298)
Q Consensus 150 ~aDLVIaNT~v~ 161 (298)
++|.|+..+.+.
T Consensus 217 ~aDvvy~~~w~s 228 (307)
T 2i6u_A 217 GADVLVTDTWTS 228 (307)
T ss_dssp TCSEEEECCSSC
T ss_pred CCCEEEecceec
Confidence 999999988763
No 361
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=32.96 E-value=68 Score=26.80 Aligned_cols=39 Identities=13% Similarity=0.118 Sum_probs=23.8
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCe-EEEEe
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTK-VNWIT 111 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~-V~vL~ 111 (298)
++++|-+|..+.+..--.-++-.+...+++.|++ +.+..
T Consensus 9 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 48 (277)
T 3hs3_A 9 KSKMIGIIIPDLNNRFYAQIIDGIQEVIQKEGYTALISFS 48 (277)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEEeCCCCChhHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 4566777777665433334455566777788888 44433
No 362
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=32.94 E-value=84 Score=26.45 Aligned_cols=40 Identities=8% Similarity=0.013 Sum_probs=28.0
Q ss_pred cccEEEEEeccCCCCCch-HHHHHHHHHHHhCCCeEEEEec
Q 022363 73 KSKLVLLVSHELSLSGGP-LLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 73 ~~KkILLISHELS~TGAP-LlLleLA~~Lkq~G~~V~vL~~ 112 (298)
++++|-+|..+.+..--. -++-.+...+++.|+++.+...
T Consensus 12 ~s~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 52 (301)
T 3miz_A 12 RSNTFGIITDYVSTTPYSVDIVRGIQDWANANGKTILIANT 52 (301)
T ss_dssp CCCEEEEEESSTTTCCSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEEeCCCcCcccHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 456777777777655444 5666777888888888877663
No 363
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=32.75 E-value=2e+02 Score=27.31 Aligned_cols=78 Identities=12% Similarity=0.135 Sum_probs=47.5
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhcc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~a 151 (298)
.+|++|.+|++- |+ +.-.++..+...|.+|.+.+-++=...+++...+.+...+.|..+......+ ...++
T Consensus 151 l~glkva~vGD~-~r-----va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~---av~~a 221 (355)
T 4a8p_A 151 LEDCKVVFVGDA-TQ-----VCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS---SVEGA 221 (355)
T ss_dssp GGGCEEEEESCC-CH-----HHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG---GGTTC
T ss_pred CCCCEEEEECCC-ch-----hHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH---HHcCC
Confidence 689999999964 44 3455566666679999998843322334443333333445575543221122 46799
Q ss_pred CEEEEec
Q 022363 152 DLIVLNT 158 (298)
Q Consensus 152 DLVIaNT 158 (298)
|.|+.-+
T Consensus 222 DVVytd~ 228 (355)
T 4a8p_A 222 DFLYTDV 228 (355)
T ss_dssp SEEEECC
T ss_pred CEEEecc
Confidence 9999744
No 364
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=32.75 E-value=33 Score=29.55 Aligned_cols=42 Identities=14% Similarity=0.214 Sum_probs=27.7
Q ss_pred CCccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 66 SSPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 66 ~~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
+.|....+||+||+.. |+-=+=.++|+.|.+.|++|.++...
T Consensus 6 ~~~~~~~~~k~vlVTG------as~GIG~aia~~l~~~G~~V~~~~r~ 47 (269)
T 3vtz_A 6 HHHMEEFTDKVAIVTG------GSSGIGLAVVDALVRYGAKVVSVSLD 47 (269)
T ss_dssp ----CTTTTCEEEESS------TTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cccccCCCCCEEEEeC------CCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4466677888877642 22335578999999999998887643
No 365
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=32.70 E-value=1.2e+02 Score=24.86 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=24.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
|++|+||+.. -+| -+=.++++.|.+.|++|.++..
T Consensus 4 ~~~k~vlVtG----asg--giG~~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 4 LDGKVAIITG----GTL--GIGLAIATKFVEEGAKVMITGR 38 (251)
T ss_dssp TTTCEEEETT----TTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCcEEEEeC----CCC--hHHHHHHHHHHHCCCEEEEEeC
Confidence 5677766532 223 2557899999999999887763
No 366
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=32.69 E-value=2.3e+02 Score=24.16 Aligned_cols=78 Identities=12% Similarity=0.026 Sum_probs=42.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHH---HcCCceee--hhchhHHHh
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW---DRGVQVIS--AKGQETINT 147 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll---~rgI~v~~--~k~~~~i~~ 147 (298)
++|+||+.. -|| -+=.++++.|.+.|++|.++...... ..+. .+++. ..++..+. -.....+..
T Consensus 4 ~~~~vlVTG----atG--~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 72 (341)
T 3enk_A 4 TKGTILVTG----GAG--YIGSHTAVELLAHGYDVVIADNLVNS-KREA----IARIEKITGKTPAFHETDVSDERALAR 72 (341)
T ss_dssp SSCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEECCCSSS-CTHH----HHHHHHHHSCCCEEECCCTTCHHHHHH
T ss_pred CCcEEEEec----CCc--HHHHHHHHHHHHCCCcEEEEecCCcc-hHHH----HHHHHhhcCCCceEEEeecCCHHHHHH
Confidence 345665542 223 35568899999999999888743322 1222 22222 22444442 123334442
Q ss_pred -h--hccCEEEEechhc
Q 022363 148 -A--LKADLIVLNTAVA 161 (298)
Q Consensus 148 -A--~~aDLVIaNT~v~ 161 (298)
. .++|.||-|....
T Consensus 73 ~~~~~~~d~vih~A~~~ 89 (341)
T 3enk_A 73 IFDAHPITAAIHFAALK 89 (341)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHhccCCcEEEECcccc
Confidence 2 2799999887653
No 367
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=32.67 E-value=1.3e+02 Score=21.30 Aligned_cols=70 Identities=13% Similarity=0.047 Sum_probs=40.1
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCC-CeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-hhh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVG-TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TAL 149 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G-~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~-~A~ 149 (298)
+++|+++.= +. +=..+++.|.+.| ++|.++. +.+ .-.+++...|+..+.. .....+. ...
T Consensus 5 ~~~v~I~G~--G~-----iG~~~~~~l~~~g~~~v~~~~-r~~--------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 68 (118)
T 3ic5_A 5 RWNICVVGA--GK-----IGQMIAALLKTSSNYSVTVAD-HDL--------AALAVLNRMGVATKQVDAKDEAGLAKALG 68 (118)
T ss_dssp CEEEEEECC--SH-----HHHHHHHHHHHCSSEEEEEEE-SCH--------HHHHHHHTTTCEEEECCTTCHHHHHHHTT
T ss_pred cCeEEEECC--CH-----HHHHHHHHHHhCCCceEEEEe-CCH--------HHHHHHHhCCCcEEEecCCCHHHHHHHHc
Confidence 467887742 22 3346788888899 7776655 322 1123344456655422 2223343 456
Q ss_pred ccCEEEEech
Q 022363 150 KADLIVLNTA 159 (298)
Q Consensus 150 ~aDLVIaNT~ 159 (298)
++|.||.++-
T Consensus 69 ~~d~vi~~~~ 78 (118)
T 3ic5_A 69 GFDAVISAAP 78 (118)
T ss_dssp TCSEEEECSC
T ss_pred CCCEEEECCC
Confidence 8999998874
No 368
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=32.57 E-value=1.5e+02 Score=21.77 Aligned_cols=70 Identities=20% Similarity=0.264 Sum_probs=40.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCceeeh--hchhHHHh--h
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVISA--KGQETINT--A 148 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~r-gI~v~~~--k~~~~i~~--A 148 (298)
+++|++++ ++..| ..+++.|.+.|++|.++... + + -.+++.+. |+.++.. .....+.. .
T Consensus 4 ~m~i~IiG--~G~iG-----~~~a~~L~~~g~~v~~~d~~-~----~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 67 (140)
T 1lss_A 4 GMYIIIAG--IGRVG-----YTLAKSLSEKGHDIVLIDID-K----D----ICKKASAEIDALVINGDCTKIKTLEDAGI 67 (140)
T ss_dssp -CEEEEEC--CSHHH-----HHHHHHHHHTTCEEEEEESC-H----H----HHHHHHHHCSSEEEESCTTSHHHHHHTTT
T ss_pred CCEEEEEC--CCHHH-----HHHHHHHHhCCCeEEEEECC-H----H----HHHHHHHhcCcEEEEcCCCCHHHHHHcCc
Confidence 45788875 23334 45788888899998877532 1 1 12344433 7765532 22233332 4
Q ss_pred hccCEEEEech
Q 022363 149 LKADLIVLNTA 159 (298)
Q Consensus 149 ~~aDLVIaNT~ 159 (298)
.++|.||..|-
T Consensus 68 ~~~d~vi~~~~ 78 (140)
T 1lss_A 68 EDADMYIAVTG 78 (140)
T ss_dssp TTCSEEEECCS
T ss_pred ccCCEEEEeeC
Confidence 68999999874
No 369
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=32.54 E-value=1.1e+02 Score=28.78 Aligned_cols=58 Identities=17% Similarity=0.163 Sum_probs=40.6
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC---CCchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP---SEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G---~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+|+|++| |+=..-+|+|..|.+.|.+|.++..... ..+.++...+++.+.++ |++...
T Consensus 174 ~k~vvVi-------GgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~ 234 (492)
T 3ic9_A 174 PKSVAVF-------GPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAK 234 (492)
T ss_dssp CSEEEEE-------SSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETT
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHHcCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEEC
Confidence 6788888 3444678999999999999999874332 13455655666666665 776643
No 370
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=32.49 E-value=51 Score=22.82 Aligned_cols=32 Identities=9% Similarity=0.237 Sum_probs=25.5
Q ss_pred cCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEE
Q 022363 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFA 274 (298)
Q Consensus 238 ~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~ 274 (298)
+.+++.-+ .+.+. +-+.+.+.+|+|++|+.|.
T Consensus 13 grs~eqK~----~l~~~-lt~~l~~~lg~p~~~v~V~ 44 (67)
T 3m21_A 13 GPTNEQKQ----QLIEG-VSDLMVKVLNKNKASIVVI 44 (67)
T ss_dssp BSCHHHHH----HHHHH-HHHHHHHHHCCCGGGCEEE
T ss_pred CCCHHHHH----HHHHH-HHHHHHHHHCcCcccEEEE
Confidence 45676666 78887 8888999999999987664
No 371
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=32.48 E-value=57 Score=22.98 Aligned_cols=38 Identities=18% Similarity=0.243 Sum_probs=28.2
Q ss_pred cCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEEecccCh
Q 022363 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSMNF 281 (298)
Q Consensus 238 ~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~~~sv~~ 281 (298)
+.+++.-+ .+.++ +-+.+.+.+|+|++|+.|. |.-+.+
T Consensus 11 grs~eqK~----~L~~~-it~~l~~~lg~p~~~v~V~-i~e~~~ 48 (72)
T 3mb2_A 11 GRSTEQKA----ELARA-LSAAAAAAFDVPLAEVRLI-IQEVPP 48 (72)
T ss_dssp CCCHHHHH----HHHHH-HHHHHHHHHTCCGGGEEEE-EEEECG
T ss_pred CCCHHHHH----HHHHH-HHHHHHHHhCCCcccEEEE-EEEcCH
Confidence 56776666 88888 8888999999999887664 344443
No 372
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=32.37 E-value=67 Score=24.76 Aligned_cols=69 Identities=16% Similarity=0.124 Sum_probs=39.1
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHH-HcCCceeehhchhHHHhhhccC
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMW-DRGVQVISAKGQETINTALKAD 152 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll-~rgI~v~~~k~~~~i~~A~~aD 152 (298)
+|+|++|+ +|. +=..++..|++.|++ +.+.++..+ .. +++. +.|+.+......+ ....++|
T Consensus 21 ~~~v~iiG-----~G~--iG~~~a~~l~~~g~~-v~v~~r~~~-------~~-~~~a~~~~~~~~~~~~~~--~~~~~~D 82 (144)
T 3oj0_A 21 GNKILLVG-----NGM--LASEIAPYFSYPQYK-VTVAGRNID-------HV-RAFAEKYEYEYVLINDID--SLIKNND 82 (144)
T ss_dssp CCEEEEEC-----CSH--HHHHHGGGCCTTTCE-EEEEESCHH-------HH-HHHHHHHTCEEEECSCHH--HHHHTCS
T ss_pred CCEEEEEC-----CCH--HHHHHHHHHHhCCCE-EEEEcCCHH-------HH-HHHHHHhCCceEeecCHH--HHhcCCC
Confidence 89999997 232 223566777888999 555555431 11 2222 3355543221111 2356899
Q ss_pred EEEEechh
Q 022363 153 LIVLNTAV 160 (298)
Q Consensus 153 LVIaNT~v 160 (298)
+||..|-.
T Consensus 83 ivi~at~~ 90 (144)
T 3oj0_A 83 VIITATSS 90 (144)
T ss_dssp EEEECSCC
T ss_pred EEEEeCCC
Confidence 99988764
No 373
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=32.32 E-value=1.1e+02 Score=25.93 Aligned_cols=71 Identities=14% Similarity=0.114 Sum_probs=41.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee--hhchhHHH-hh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--AKGQETIN-TA 148 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~--~k~~~~i~-~A 148 (298)
|++|+||+.. -||. +=.++++.|.+.|++|.++........ ..++..+. -....++. ..
T Consensus 1 m~~k~vlVTG----asg~--IG~~la~~L~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~ 62 (267)
T 3rft_A 1 MAMKRLLVTG----AAGQ--LGRVMRERLAPMAEILRLADLSPLDPA------------GPNEECVQCDLADANAVNAMV 62 (267)
T ss_dssp CCEEEEEEES----TTSH--HHHHHHHHTGGGEEEEEEEESSCCCCC------------CTTEEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEEC----CCCH--HHHHHHHHHHhcCCEEEEEecCCcccc------------CCCCEEEEcCCCCHHHHHHHH
Confidence 4567666542 2232 556889999999999888774432110 12333331 12333443 45
Q ss_pred hccCEEEEechh
Q 022363 149 LKADLIVLNTAV 160 (298)
Q Consensus 149 ~~aDLVIaNT~v 160 (298)
.++|.||-|...
T Consensus 63 ~~~D~vi~~Ag~ 74 (267)
T 3rft_A 63 AGCDGIVHLGGI 74 (267)
T ss_dssp TTCSEEEECCSC
T ss_pred cCCCEEEECCCC
Confidence 689999988654
No 374
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=32.31 E-value=2.3e+02 Score=27.64 Aligned_cols=84 Identities=14% Similarity=0.072 Sum_probs=44.1
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHHh
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETINT 147 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~~ 147 (298)
..+++|+||+.. -|| -+=-++++.|.+.|++|.++....... .+....+ +.+...++.++.. ....++..
T Consensus 7 ~~~~~~~ilVTG----atG--~IG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~l-~~~~~~~v~~v~~Dl~d~~~l~~ 78 (699)
T 1z45_A 7 SESTSKIVLVTG----GAG--YIGSHTVVELIENGYDCVVADNLSNST-YDSVARL-EVLTKHHIPFYEVDLCDRKGLEK 78 (699)
T ss_dssp ----CCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEECCSSCC-THHHHHH-HHHHTSCCCEEECCTTCHHHHHH
T ss_pred cccCCCEEEEEC----CCC--HHHHHHHHHHHHCcCEEEEEECCCcch-HHHHHHH-hhccCCceEEEEcCCCCHHHHHH
Confidence 446788887753 233 356688899999999999887443211 1110111 1122335554421 22334442
Q ss_pred -hh--ccCEEEEechhc
Q 022363 148 -AL--KADLIVLNTAVA 161 (298)
Q Consensus 148 -A~--~aDLVIaNT~v~ 161 (298)
+. ++|.||-|....
T Consensus 79 ~~~~~~~D~Vih~A~~~ 95 (699)
T 1z45_A 79 VFKEYKIDSVIHFAGLK 95 (699)
T ss_dssp HHHHSCCCEEEECCSCC
T ss_pred HHHhCCCCEEEECCccc
Confidence 23 699999887643
No 375
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=32.28 E-value=75 Score=26.88 Aligned_cols=67 Identities=16% Similarity=0.228 Sum_probs=45.5
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhC--CCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeeh-h----chhHH
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGV--GTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISA-K----GQETI 145 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~--G~~V~vL~~~~G~~~g~v~~~L~~kll~-rgI~v~~~-k----~~~~i 145 (298)
+++|+++-||-+-. -++++|+.+.+. |++.+.-. | ..+.+.+ .|+++-.- + |...|
T Consensus 11 ~g~V~lsv~D~dK~----~~v~~ak~~~~ll~Gf~l~AT~---g---------Ta~~L~e~~Gl~v~~v~k~~eGG~p~I 74 (152)
T 1b93_A 11 RKHIALVAHDHCKQ----MLMSWVERHQPLLEQHVLYATG---T---------TGNLISRATGMNVNAMLSGPMGGDQQV 74 (152)
T ss_dssp SCEEEEEECGGGHH----HHHHHHHHTHHHHTTSEEEEET---T---------HHHHHHHHHCCCCEEECCGGGTHHHHH
T ss_pred CCEEEEEEehhhHH----HHHHHHHHHHHHhCCCEEEEcc---H---------HHHHHHHHhCceeEEEEecCCCCCchH
Confidence 36799999998873 678999999999 99876544 2 1234444 58887533 2 33344
Q ss_pred H---hhhccCEEEE
Q 022363 146 N---TALKADLIVL 156 (298)
Q Consensus 146 ~---~A~~aDLVIa 156 (298)
- ...++|+||.
T Consensus 75 ~d~I~~geIdlVIn 88 (152)
T 1b93_A 75 GALISEGKIDVLIF 88 (152)
T ss_dssp HHHHHTTCCCEEEE
T ss_pred HHHHHCCCccEEEE
Confidence 3 3568999884
No 376
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=32.23 E-value=66 Score=27.57 Aligned_cols=84 Identities=17% Similarity=0.193 Sum_probs=44.4
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcC--Ccee--ehhch
Q 022363 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRG--VQVI--SAKGQ 142 (298)
Q Consensus 67 ~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rg--I~v~--~~k~~ 142 (298)
++..-+++|++|+..= +|..=+=.++|+.|.+.|++|.++..... .+ ..+++.+.+ +..+ +-...
T Consensus 19 ~~M~~l~~k~vlVTGa----sg~~GIG~~ia~~l~~~G~~V~~~~r~~~---~~----~~~~l~~~~~~~~~~~~Dl~~~ 87 (280)
T 3nrc_A 19 SHMGFLAGKKILITGL----LSNKSIAYGIAKAMHREGAELAFTYVGQF---KD----RVEKLCAEFNPAAVLPCDVISD 87 (280)
T ss_dssp ---CTTTTCEEEECCC----CSTTCHHHHHHHHHHHTTCEEEEEECTTC---HH----HHHHHHGGGCCSEEEECCTTCH
T ss_pred CcccccCCCEEEEECC----CCCCCHHHHHHHHHHHcCCEEEEeeCchH---HH----HHHHHHHhcCCceEEEeecCCH
Confidence 4455678887776431 11011446889999999999877764331 11 123443332 2222 11222
Q ss_pred hHHH--------hhhccCEEEEechhc
Q 022363 143 ETIN--------TALKADLIVLNTAVA 161 (298)
Q Consensus 143 ~~i~--------~A~~aDLVIaNT~v~ 161 (298)
++++ ....+|.+|.|..+.
T Consensus 88 ~~v~~~~~~~~~~~g~id~li~nAg~~ 114 (280)
T 3nrc_A 88 QEIKDLFVELGKVWDGLDAIVHSIAFA 114 (280)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 2222 124789999998764
No 377
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=32.16 E-value=89 Score=26.84 Aligned_cols=78 Identities=15% Similarity=0.091 Sum_probs=43.6
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcC--Ccee--ehhchhHH
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRG--VQVI--SAKGQETI 145 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rg--I~v~--~~k~~~~i 145 (298)
.-++||++|+.. -+| =+=.++|+.|.+.|+.|.++..... .+++...+.+ +..+ +-...+++
T Consensus 12 ~~l~gk~vlVTG----as~--gIG~~~a~~L~~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~Dl~d~~~v 77 (291)
T 3rd5_A 12 PSFAQRTVVITG----ANS--GLGAVTARELARRGATVIMAVRDTR--------KGEAAARTMAGQVEVRELDLQDLSSV 77 (291)
T ss_dssp CCCTTCEEEEEC----CSS--HHHHHHHHHHHHTTCEEEEEESCHH--------HHHHHHTTSSSEEEEEECCTTCHHHH
T ss_pred cCCCCCEEEEeC----CCC--hHHHHHHHHHHHCCCEEEEEECCHH--------HHHHHHHHhcCCeeEEEcCCCCHHHH
Confidence 346888777653 222 2557899999999999887763321 1222222222 2222 11333344
Q ss_pred H----hhhccCEEEEechhc
Q 022363 146 N----TALKADLIVLNTAVA 161 (298)
Q Consensus 146 ~----~A~~aDLVIaNT~v~ 161 (298)
+ .....|.+|.|..+.
T Consensus 78 ~~~~~~~~~iD~lv~nAg~~ 97 (291)
T 3rd5_A 78 RRFADGVSGADVLINNAGIM 97 (291)
T ss_dssp HHHHHTCCCEEEEEECCCCC
T ss_pred HHHHHhcCCCCEEEECCcCC
Confidence 3 223779999888754
No 378
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=32.09 E-value=1.7e+02 Score=27.42 Aligned_cols=80 Identities=11% Similarity=0.063 Sum_probs=49.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--eehhchhHHHhhh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--ISAKGQETINTAL 149 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v--~~~k~~~~i~~A~ 149 (298)
.+|++|.+|..--|+ +.-.++..|...|.+|.+.+-++=...+++..-+++...+.|..+ ..+ . -+...
T Consensus 165 l~gl~va~vGD~~~r-----va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d--~--~eav~ 235 (325)
T 1vlv_A 165 LKGVKVVFMGDTRNN-----VATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSN--L--EEALA 235 (325)
T ss_dssp STTCEEEEESCTTSH-----HHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESC--H--HHHHT
T ss_pred cCCcEEEEECCCCcC-----cHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcC--H--HHHHc
Confidence 589999999872132 555666666677999999883322222334323333334667544 333 1 12467
Q ss_pred ccCEEEEechh
Q 022363 150 KADLIVLNTAV 160 (298)
Q Consensus 150 ~aDLVIaNT~v 160 (298)
++|.|+..+.+
T Consensus 236 ~aDvvyt~~w~ 246 (325)
T 1vlv_A 236 GADVVYTDVWA 246 (325)
T ss_dssp TCSEEEECCCC
T ss_pred cCCEEEecccc
Confidence 99999998876
No 379
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=31.98 E-value=2.3e+02 Score=23.80 Aligned_cols=39 Identities=21% Similarity=0.270 Sum_probs=25.5
Q ss_pred ccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 68 ~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
|..-++||++|+.. -+| =+=.++|+.|.+.|++|+++..
T Consensus 7 ~~~~l~~k~vlVTG----as~--gIG~~ia~~l~~~G~~V~~~~r 45 (267)
T 1iy8_A 7 PTTRFTDRVVLITG----GGS--GLGRATAVRLAAEGAKLSLVDV 45 (267)
T ss_dssp ---CCTTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCccCCCCEEEEEC----CCC--HHHHHHHHHHHHCCCEEEEEeC
Confidence 33346788776653 222 2556889999999999888763
No 380
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=31.91 E-value=50 Score=23.60 Aligned_cols=41 Identities=5% Similarity=0.096 Sum_probs=31.9
Q ss_pred cC-cHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEEecccChhhH
Q 022363 238 GN-SKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSMNFLLI 284 (298)
Q Consensus 238 ~~-s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~~~sv~~~~~ 284 (298)
|. +++.-+ ++.++ +-+.+.+.+|+|++|+ +-.|.-+.++-.
T Consensus 10 Grls~eqk~----~L~~~-l~~~l~~~lgip~~~v-~V~i~e~~~~~w 51 (76)
T 1gyx_A 10 RELDEQQKA----ALAAD-ITDVIIRHLNSKDSSI-SIALQQIQPESW 51 (76)
T ss_dssp CCCCHHHHH----HHHHH-HHHHHHHHHTCCGGGC-EEEEEECCGGGH
T ss_pred CCCCHHHHH----HHHHH-HHHHHHHHhCcCCceE-EEEEEEeChHHE
Confidence 56 777777 88888 8888999999999998 556667776544
No 381
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=31.91 E-value=1.3e+02 Score=25.40 Aligned_cols=79 Identities=6% Similarity=-0.018 Sum_probs=43.5
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
++||++|+.. -+| =+=.++|+.|.+.|+.|.++..+..+ . ...+.+++.+.|..+. +-...++++
T Consensus 6 l~~k~vlVTG----as~--GIG~aia~~la~~G~~V~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 75 (259)
T 3edm_A 6 FTNRTIVVAG----AGR--DIGRACAIRFAQEGANVVLTYNGAAE---G-AATAVAEIEKLGRSALAIKADLTNAAEVEA 75 (259)
T ss_dssp TTTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEECSSCH---H-HHHHHHHHHTTTSCCEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEC----CCc--hHHHHHHHHHHHCCCEEEEEcCCCHH---H-HHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 5677666542 222 24468899999999999887644331 1 1122344444443332 112222222
Q ss_pred -------hhhccCEEEEechh
Q 022363 147 -------TALKADLIVLNTAV 160 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v 160 (298)
.....|.+|.|...
T Consensus 76 ~~~~~~~~~g~id~lv~nAg~ 96 (259)
T 3edm_A 76 AISAAADKFGEIHGLVHVAGG 96 (259)
T ss_dssp HHHHHHHHHCSEEEEEECCCC
T ss_pred HHHHHHHHhCCCCEEEECCCc
Confidence 22478999988764
No 382
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=31.79 E-value=2.3e+02 Score=26.32 Aligned_cols=81 Identities=14% Similarity=0.168 Sum_probs=47.0
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC-CchhhhhhhHHHHHHcCCcee--ehhchh
Q 022363 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS-EEDEVIYSLEHKMWDRGVQVI--SAKGQE 143 (298)
Q Consensus 67 ~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~-~~g~v~~~L~~kll~rgI~v~--~~k~~~ 143 (298)
++.+|.+...++| +|--| | ..+...+...+.|..+.+......| .+|.- |..++.+.||++. .|..--
T Consensus 114 ~~~~~I~~g~~IL-Th~~S--~---tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~---la~~L~~~gI~vtli~Dsa~~ 184 (315)
T 3ecs_A 114 LCHTFIKDGATIL-THAYS--R---VVLRVLEAAVAAKKRFSVYVTESQPDLSGKK---MAKALCHLNVPVTVVLDAAVG 184 (315)
T ss_dssp HHGGGCCTTEEEE-ECSCC--H---HHHHHHHHHHTTTCCEEEEEECCTTTTHHHH---HHHHHHTTTCCEEEECGGGHH
T ss_pred HHHHHcCCCCEEE-EcCCc--H---HHHHHHHHHHHcCCeEEEEEecCCCcchHHH---HHHHHHHcCCCEEEEehhHHH
Confidence 6778887765544 57544 3 3344445556678777777755444 34443 5788888899976 442222
Q ss_pred HHHhhhccCEEEEec
Q 022363 144 TINTALKADLIVLNT 158 (298)
Q Consensus 144 ~i~~A~~aDLVIaNT 158 (298)
. ...+.|.||+++
T Consensus 185 ~--~m~~vd~VivGA 197 (315)
T 3ecs_A 185 Y--IMEKADLVIVGA 197 (315)
T ss_dssp H--HGGGCSEEEEEC
T ss_pred H--HHHhCCEEEECc
Confidence 1 223566665543
No 383
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=31.79 E-value=1.7e+02 Score=24.35 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=23.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
+++|++|+.. |+.=+=.++|+.|.+.|++|.++.
T Consensus 7 l~~k~vlITG------as~gIG~~~a~~l~~~G~~V~~~~ 40 (261)
T 3n74_A 7 LEGKVALITG------AGSGFGEGMAKRFAKGGAKVVIVD 40 (261)
T ss_dssp TTTCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEEC------CCchHHHHHHHHHHHCCCEEEEEc
Confidence 4677666542 222255789999999999987776
No 384
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=31.72 E-value=2.1e+02 Score=26.85 Aligned_cols=78 Identities=12% Similarity=0.135 Sum_probs=46.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhcc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKA 151 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~a 151 (298)
.+|++|.+|++- |+ +.-.++..+...|.+|.+.+-++=...+++.....+...+.|..+......+ ...++
T Consensus 173 l~glkva~vGD~-~r-----va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~---av~~a 243 (339)
T 4a8t_A 173 LEDCKVVFVGDA-TQ-----VCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS---SVEGA 243 (339)
T ss_dssp GGGCEEEEESSC-CH-----HHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG---GGTTC
T ss_pred CCCCEEEEECCC-ch-----hHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh---HHcCC
Confidence 689999999964 44 3445556666679999988843322233443333333344575443221122 46799
Q ss_pred CEEEEec
Q 022363 152 DLIVLNT 158 (298)
Q Consensus 152 DLVIaNT 158 (298)
|.|+.-+
T Consensus 244 Dvvytd~ 250 (339)
T 4a8t_A 244 DFLYTDV 250 (339)
T ss_dssp SEEEECC
T ss_pred CEEEecC
Confidence 9999743
No 385
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=31.68 E-value=1.6e+02 Score=25.28 Aligned_cols=38 Identities=11% Similarity=-0.081 Sum_probs=23.1
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
+++|-+|..+++..--.-++-.+-..+++.|+++.+..
T Consensus 5 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~l~~~~ 42 (332)
T 2rjo_A 5 QTTLACSFRSLTNPYYTAFNKGAQSFAKSVGLPYVPLT 42 (332)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ccEEEEEecCCCcHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 45677777665433223344555567777888877665
No 386
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=31.56 E-value=88 Score=26.61 Aligned_cols=82 Identities=15% Similarity=0.095 Sum_probs=46.2
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH---cCCcee--eh-hch
Q 022363 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD---RGVQVI--SA-KGQ 142 (298)
Q Consensus 69 ~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~---rgI~v~--~~-k~~ 142 (298)
..++++|+||+.+ -|| -+=-++++.|.+.|++|..+..... .. ..+.+.+.. .++..+ -| ...
T Consensus 6 ~~~~~~~~vlVTG----atG--~iG~~l~~~L~~~g~~V~~~~r~~~----~~-~~~~~~~~~~~~~~~~~~~~~D~~d~ 74 (342)
T 1y1p_A 6 AVLPEGSLVLVTG----ANG--FVASHVVEQLLEHGYKVRGTARSAS----KL-ANLQKRWDAKYPGRFETAVVEDMLKQ 74 (342)
T ss_dssp CSSCTTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEESSHH----HH-HHHHHHHHHHSTTTEEEEECSCTTST
T ss_pred ccCCCCCEEEEEC----Ccc--HHHHHHHHHHHHCCCEEEEEeCCcc----cH-HHHHHHhhccCCCceEEEEecCCcCh
Confidence 4578899887652 233 3667889999999999988874321 11 112222221 234433 12 222
Q ss_pred hHHH-hhhccCEEEEechhc
Q 022363 143 ETIN-TALKADLIVLNTAVA 161 (298)
Q Consensus 143 ~~i~-~A~~aDLVIaNT~v~ 161 (298)
..+. ...++|.||-|....
T Consensus 75 ~~~~~~~~~~d~vih~A~~~ 94 (342)
T 1y1p_A 75 GAYDEVIKGAAGVAHIASVV 94 (342)
T ss_dssp TTTTTTTTTCSEEEECCCCC
T ss_pred HHHHHHHcCCCEEEEeCCCC
Confidence 3333 344899999887543
No 387
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=31.51 E-value=1.7e+02 Score=27.12 Aligned_cols=80 Identities=8% Similarity=-0.001 Sum_probs=45.9
Q ss_pred cc-ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhc
Q 022363 72 MK-SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALK 150 (298)
Q Consensus 72 ~~-~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~ 150 (298)
.+ |++|.+|++ .|+ +.-.++..+...|.+|.+.+-++=...+++..-..+...+.|..+......+ +...+
T Consensus 143 l~~gl~va~vGD-~~~-----va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~--eav~~ 214 (307)
T 3tpf_A 143 QNGIAKVAFIGD-SNN-----MCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKF--EALKD 214 (307)
T ss_dssp GGGCCEEEEESC-SSH-----HHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHH--HHHTT
T ss_pred CCCCCEEEEEcC-CCc-----cHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHH--HHhcC
Confidence 46 999999997 443 4555566666669999988843322223332222222224565543221111 24679
Q ss_pred cCEEEEech
Q 022363 151 ADLIVLNTA 159 (298)
Q Consensus 151 aDLVIaNT~ 159 (298)
+|.|+.-+-
T Consensus 215 aDvvyt~~w 223 (307)
T 3tpf_A 215 KDVVITDTW 223 (307)
T ss_dssp CSEEEECCS
T ss_pred CCEEEecCc
Confidence 999998663
No 388
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=31.40 E-value=1.7e+02 Score=24.38 Aligned_cols=38 Identities=11% Similarity=0.033 Sum_probs=26.4
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEE
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWI 110 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL 110 (298)
++++|-+|..+.+..--.-++-.+...+++.|+++.+.
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~ 44 (290)
T 3clk_A 7 SSNVIAAVVSSVRTNFAQQILDGIQEEAHKNGYNLIIV 44 (290)
T ss_dssp -CCEEEEECCCCSSSHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred cCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCCeEEEE
Confidence 45678888877654433445566678888999998876
No 389
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=31.36 E-value=58 Score=31.03 Aligned_cols=73 Identities=19% Similarity=0.229 Sum_probs=38.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc--CCcee--ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR--GVQVI--SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~r--gI~v~--~~k~~~~i~- 146 (298)
|++|+|+++. .+..|.. +++.|.+.|++|.+.. +..+ . .+++.+. ++..+ +......+.
T Consensus 1 M~~k~VlViG--aG~iG~~-----ia~~L~~~G~~V~v~~-R~~~---~-----a~~la~~~~~~~~~~~Dv~d~~~l~~ 64 (450)
T 1ff9_A 1 MATKSVLMLG--SGFVTRP-----TLDVLTDSGIKVTVAC-RTLE---S-----AKKLSAGVQHSTPISLDVNDDAALDA 64 (450)
T ss_dssp -CCCEEEEEC--CSTTHHH-----HHHHHHTTTCEEEEEE-SSHH---H-----HHHTTTTCTTEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEC--CCHHHHH-----HHHHHHhCcCEEEEEE-CCHH---H-----HHHHHHhcCCceEEEeecCCHHHHHH
Confidence 6789999986 5555653 5566778899865544 3321 0 1222221 12221 112223333
Q ss_pred hhhccCEEEEechh
Q 022363 147 TALKADLIVLNTAV 160 (298)
Q Consensus 147 ~A~~aDLVIaNT~v 160 (298)
...++|+||.+|-.
T Consensus 65 ~l~~~DvVIn~a~~ 78 (450)
T 1ff9_A 65 EVAKHDLVISLIPY 78 (450)
T ss_dssp HHTTSSEEEECCC-
T ss_pred HHcCCcEEEECCcc
Confidence 34589999998865
No 390
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=31.35 E-value=1.2e+02 Score=21.93 Aligned_cols=32 Identities=25% Similarity=0.190 Sum_probs=22.3
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
..+||+|..| |...-.+...|.+.|+++...+
T Consensus 9 ~~~iLivdd~------~~~~~~l~~~L~~~g~~v~~~~ 40 (140)
T 3cg0_A 9 LPGVLIVEDG------RLAAATLRIQLESLGYDVLGVF 40 (140)
T ss_dssp CCEEEEECCB------HHHHHHHHHHHHHHTCEEEEEE
T ss_pred CceEEEEECC------HHHHHHHHHHHHHCCCeeEEEE
Confidence 4568888766 5666777777877788776433
No 391
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=31.33 E-value=2.6e+02 Score=27.08 Aligned_cols=87 Identities=16% Similarity=0.089 Sum_probs=49.9
Q ss_pred ccccEEEEEe-ccCCCCCch-HHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhh
Q 022363 72 MKSKLVLLVS-HELSLSGGP-LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTAL 149 (298)
Q Consensus 72 ~~~KkILLIS-HELS~TGAP-LlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~ 149 (298)
.+|++|.+|. |+++. |-+ =+.-.++..|...|.+|.+.+-++=....+++.-..+...+.|..+...... -....
T Consensus 186 l~Glkva~vgd~~~s~-Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~--~eav~ 262 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSY-GKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSM--AEAFK 262 (418)
T ss_dssp GTTCEEEEECCCCSSS-CCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCH--HHHHT
T ss_pred cCCCEEEEEecccccc-CccchHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCH--HHHhc
Confidence 6899999996 22222 222 3666777777778999999884321112333222233344567544322111 12467
Q ss_pred ccCEEEEechhc
Q 022363 150 KADLIVLNTAVA 161 (298)
Q Consensus 150 ~aDLVIaNT~v~ 161 (298)
++|.|+.-+=++
T Consensus 263 ~ADVVytd~W~s 274 (418)
T 2yfk_A 263 DADVVYPKSWAP 274 (418)
T ss_dssp TCSEEEECCCCC
T ss_pred CCCEEEEccccc
Confidence 999999987554
No 392
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=31.30 E-value=2.1e+02 Score=24.05 Aligned_cols=78 Identities=13% Similarity=0.180 Sum_probs=43.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee----hhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS----AKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~----~k~~~~i~- 146 (298)
++||++|+.. -+| =+=.++|+.|.+.|+.|.++..+ .+. ...+.+++.+.|.++.. -...++++
T Consensus 5 ~~~k~vlVTG----as~--GIG~aia~~l~~~G~~V~~~~r~-~~~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 73 (252)
T 3h7a_A 5 PRNATVAVIG----AGD--YIGAEIAKKFAAEGFTVFAGRRN-GEK----LAPLVAEIEAAGGRIVARSLDARNEDEVTA 73 (252)
T ss_dssp CCSCEEEEEC----CSS--HHHHHHHHHHHHTTCEEEEEESS-GGG----GHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEC----CCc--hHHHHHHHHHHHCCCEEEEEeCC-HHH----HHHHHHHHHhcCCeEEEEECcCCCHHHHHH
Confidence 4567655542 222 25578999999999998777643 211 12334555555544331 12222332
Q ss_pred ---hh---hccCEEEEechh
Q 022363 147 ---TA---LKADLIVLNTAV 160 (298)
Q Consensus 147 ---~A---~~aDLVIaNT~v 160 (298)
.. ...|.+|.|..+
T Consensus 74 ~~~~~~~~g~id~lv~nAg~ 93 (252)
T 3h7a_A 74 FLNAADAHAPLEVTIFNVGA 93 (252)
T ss_dssp HHHHHHHHSCEEEEEECCCC
T ss_pred HHHHHHhhCCceEEEECCCc
Confidence 11 478999988775
No 393
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=31.25 E-value=1.4e+02 Score=24.73 Aligned_cols=74 Identities=20% Similarity=0.144 Sum_probs=43.3
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhccCE
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~aDL 153 (298)
.|+|+++-.|-. -.+-+......|+..|+++.++...++.. ..+. ...|+.+..+.....++ ..++|.
T Consensus 2 ~~kV~ill~~g~---~~~e~~~~~~~l~~ag~~v~~vs~~~~~~-~~v~-------~~~g~~v~~~~~l~~~~-~~~~D~ 69 (205)
T 2ab0_A 2 SASALVCLAPGS---EETEAVTTIDLLVRGGIKVTTASVASDGN-LAIT-------CSRGVKLLADAPLVEVA-DGEYDV 69 (205)
T ss_dssp CCEEEEEECTTC---CHHHHHHHHHHHHHTTCEEEEEECSSTTC-CEEE-------CTTSCEEECSEEHHHHT-TSCCSE
T ss_pred CcEEEEEEcCCC---cHHHHHHHHHHHHHCCCEEEEEeCCCCCC-ceee-------cCCCeEEecCCCHHHCC-cccCCE
Confidence 356766665522 23445555678999999999998655410 0221 13467766654433332 367999
Q ss_pred EEEech
Q 022363 154 IVLNTA 159 (298)
Q Consensus 154 VIaNT~ 159 (298)
||+=-.
T Consensus 70 livpGG 75 (205)
T 2ab0_A 70 IVLPGG 75 (205)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 987543
No 394
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=30.94 E-value=1.1e+02 Score=26.18 Aligned_cols=65 Identities=15% Similarity=0.118 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee---h-hchhHHH--------hhhccCEEEEech
Q 022363 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS---A-KGQETIN--------TALKADLIVLNTA 159 (298)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~---~-k~~~~i~--------~A~~aDLVIaNT~ 159 (298)
+=.++|+.|.+.|+.|++...+..+ -...+.+++...|..+.. | ...++++ .....|.+|.|..
T Consensus 39 IG~aia~~la~~G~~Vv~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG 114 (267)
T 3u5t_A 39 IGAAIAARLASDGFTVVINYAGKAA----AAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAG 114 (267)
T ss_dssp HHHHHHHHHHHHTCEEEEEESSCSH----HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5568899999999999887654431 112334555555544331 1 2222222 2247999998876
Q ss_pred h
Q 022363 160 V 160 (298)
Q Consensus 160 v 160 (298)
+
T Consensus 115 ~ 115 (267)
T 3u5t_A 115 I 115 (267)
T ss_dssp C
T ss_pred C
Confidence 5
No 395
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=30.89 E-value=62 Score=28.17 Aligned_cols=37 Identities=35% Similarity=0.452 Sum_probs=29.3
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 022363 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (298)
Q Consensus 69 ~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~ 108 (298)
..-++||+||+| .|.=.||+ -|.++++.|++.|...+
T Consensus 137 ~~~~~Gk~VLIV-DDii~TG~--Tl~~a~~~L~~~ga~~V 173 (233)
T 1fsg_A 137 LSIFRDKHVLIV-EDIVDTGF--TLTEFGERLKAVGPKSM 173 (233)
T ss_dssp GGGGTTCEEEEE-EEEESSSH--HHHHHHHHHHTTCCSEE
T ss_pred ccccCCCEEEEE-ccccCcHH--HHHHHHHHHHhcCCCEE
Confidence 455799999887 66777888 67789999999998643
No 396
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=30.74 E-value=1.8e+02 Score=24.42 Aligned_cols=35 Identities=23% Similarity=0.289 Sum_probs=24.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
+++|++|+.. -+|+ +=.++++.|.+.|++|.++..
T Consensus 5 l~~k~vlVTG----as~g--IG~~ia~~l~~~G~~V~~~~r 39 (260)
T 2z1n_A 5 IQGKLAVVTA----GSSG--LGFASALELARNGARLLLFSR 39 (260)
T ss_dssp CTTCEEEEET----TTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC----CCch--HHHHHHHHHHHCCCEEEEEeC
Confidence 5677666543 2222 556889999999999887763
No 397
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=30.74 E-value=2.6e+02 Score=24.00 Aligned_cols=78 Identities=13% Similarity=0.199 Sum_probs=44.3
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee---h-hchhHH--
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS---A-KGQETI-- 145 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~---~-k~~~~i-- 145 (298)
++||++|+.. |+.=+=.++|+.|.+.|+.|.++..+.. ... .+.+++...|..+.. | .....+
T Consensus 31 l~gk~~lVTG------as~GIG~aia~~la~~G~~V~~~~r~~~-~~~----~~~~~~~~~~~~~~~~~~Dv~~~~~~~~ 99 (275)
T 4imr_A 31 LRGRTALVTG------SSRGIGAAIAEGLAGAGAHVILHGVKPG-STA----AVQQRIIASGGTAQELAGDLSEAGAGTD 99 (275)
T ss_dssp CTTCEEEETT------CSSHHHHHHHHHHHHTTCEEEEEESSTT-TTH----HHHHHHHHTTCCEEEEECCTTSTTHHHH
T ss_pred CCCCEEEEEC------CCCHHHHHHHHHHHHCCCEEEEEcCCHH-HHH----HHHHHHHhcCCeEEEEEecCCCHHHHHH
Confidence 5677666522 2233557899999999999887764332 112 234555555443321 1 111122
Q ss_pred --H---hhhccCEEEEechh
Q 022363 146 --N---TALKADLIVLNTAV 160 (298)
Q Consensus 146 --~---~A~~aDLVIaNT~v 160 (298)
+ .....|.+|.|..+
T Consensus 100 ~~~~~~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 100 LIERAEAIAPVDILVINASA 119 (275)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHhCCCCEEEECCCC
Confidence 2 12479999998764
No 398
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=30.73 E-value=50 Score=28.13 Aligned_cols=39 Identities=15% Similarity=0.071 Sum_probs=32.2
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
++-.+..++++|+. |.-=+..++|..+|+.|++|+.+++
T Consensus 74 ~i~~~D~vii~S~S----g~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 74 TLHAVDRVLIFTPD----TERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CCCTTCEEEEEESC----SCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCCCEEEEEeCC----CCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 67778888888864 4444667999999999999999997
No 399
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=30.64 E-value=2.3e+02 Score=23.38 Aligned_cols=38 Identities=16% Similarity=0.035 Sum_probs=19.6
Q ss_pred ccEEEEEecc-----CCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 74 SKLVLLVSHE-----LSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 74 ~KkILLISHE-----LS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
+++|-+|..+ .+..--.-++-.+-..+++.|+++.+..
T Consensus 8 ~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 50 (292)
T 3k4h_A 8 TKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGYALYMST 50 (292)
T ss_dssp CCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCEEEEEecCCccccccCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 4555565555 4333333344445556666666665543
No 400
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=30.55 E-value=2.2e+02 Score=27.49 Aligned_cols=85 Identities=16% Similarity=0.216 Sum_probs=49.4
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee----hhchhHH
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS----AKGQETI 145 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~----~k~~~~i 145 (298)
.|-.+|+||+.. .+|+ +=.++++.|.+.|+..++++++.++... -...+.+++...|.++.. -....++
T Consensus 255 ~~~~~~~vLITG----gtGg--IG~~lA~~La~~G~~~vvl~~R~~~~~~-~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v 327 (511)
T 2z5l_A 255 SWQPSGTVLITG----GMGA--IGRRLARRLAAEGAERLVLTSRRGPEAP-GAAELAEELRGHGCEVVHAACDVAERDAL 327 (511)
T ss_dssp CCCCCSEEEEET----TTSH--HHHHHHHHHHHTTCSEEEEEESSGGGST-THHHHHHHHHTTTCEEEEEECCSSCHHHH
T ss_pred CcCCCCEEEEEC----CCCH--HHHHHHHHHHhCCCcEEEEEecCCcccH-HHHHHHHHHHhcCCEEEEEEeCCCCHHHH
Confidence 466677666653 3444 6678999999999975556655442111 112345566666755432 1233344
Q ss_pred Hh-h--hccCEEEEechhc
Q 022363 146 NT-A--LKADLIVLNTAVA 161 (298)
Q Consensus 146 ~~-A--~~aDLVIaNT~v~ 161 (298)
.. . ..+|.||-|..+.
T Consensus 328 ~~~~~~~~ld~VVh~AGv~ 346 (511)
T 2z5l_A 328 AALVTAYPPNAVFHTAGIL 346 (511)
T ss_dssp HHHHHHSCCSEEEECCCCC
T ss_pred HHHHhcCCCcEEEECCccc
Confidence 32 2 3599999987654
No 401
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=30.50 E-value=1.4e+02 Score=21.87 Aligned_cols=34 Identities=21% Similarity=0.185 Sum_probs=21.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
|++++||+|..| |...-.+...|.+.|....+..
T Consensus 3 ~~~~~ILivdd~------~~~~~~l~~~L~~~~~~~~v~~ 36 (144)
T 3kht_A 3 LRSKRVLVVEDN------PDDIALIRRVLDRKDIHCQLEF 36 (144)
T ss_dssp --CEEEEEECCC------HHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCEEEEEeCC------HHHHHHHHHHHHhcCCCeeEEE
Confidence 345678888664 4556667778888888754444
No 402
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=30.49 E-value=2.2e+02 Score=25.47 Aligned_cols=82 Identities=12% Similarity=0.133 Sum_probs=47.6
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe-ccCCCCchhhhhhhHHHHHHcCCceeehhchhHH
Q 022363 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT-IQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETI 145 (298)
Q Consensus 67 ~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~-~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i 145 (298)
+..+|.+....+ ++|..|. ..+.+++.+.+.|....+++ ...|..+|. .+..+|.+.||++..-...-.-
T Consensus 102 ~a~~~I~~g~~I-lT~~~s~-----Tv~~~l~~a~~~~~~~~V~v~etrP~~qG~---~~a~~L~~~gI~vtli~dsa~~ 172 (276)
T 1vb5_A 102 IGAQLIDDGDVI-ITHSFSS-----TVLEIIRTAKERKKRFKVILTESSPDYEGL---HLARELEFSGIEFEVITDAQMG 172 (276)
T ss_dssp HHHHHCCTTEEE-ECCSCCH-----HHHHHHHHHHHTTCCEEEEEECCTTTTHHH---HHHHHHHHTTCCEEEECGGGHH
T ss_pred HHHHHccCCCEE-EEeCCCh-----HHHHHHHHHHHcCCeEEEEEeCCCcchhhH---HHHHHHHHCCCCEEEEcHHHHH
Confidence 566677655444 4687763 34456677777777777777 334444452 4567787889998743211111
Q ss_pred HhhhccCEEEEe
Q 022363 146 NTALKADLIVLN 157 (298)
Q Consensus 146 ~~A~~aDLVIaN 157 (298)
....++|.||+.
T Consensus 173 ~~m~~vd~vivG 184 (276)
T 1vb5_A 173 LFCREASIAIVG 184 (276)
T ss_dssp HHHTTCSEEEEC
T ss_pred HHHccCCEEEEc
Confidence 123466666653
No 403
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=30.46 E-value=1.2e+02 Score=23.64 Aligned_cols=78 Identities=22% Similarity=0.202 Sum_probs=48.6
Q ss_pred CchHHHHHHHHHHHhCCCeEEEEeccCCCC-----------------chhhhhhhHHHHHHcCCceeehhchhHHH----
Q 022363 88 GGPLLLMELAFLLRGVGTKVNWITIQKPSE-----------------EDEVIYSLEHKMWDRGVQVISAKGQETIN---- 146 (298)
Q Consensus 88 GAPLlLleLA~~Lkq~G~~V~vL~~~~G~~-----------------~g~v~~~L~~kll~rgI~v~~~k~~~~i~---- 146 (298)
||=..=+++|..|.+.|.+|.++-...+.. ..++...+.+.+.+.|+++... .-..+.
T Consensus 8 GgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~ 86 (180)
T 2ywl_A 8 GGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGG 86 (180)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSS
T ss_pred CCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCC
Confidence 333456799999999999999987443211 2455666777777778877654 111111
Q ss_pred -----h---hhccCEEEEechhchHHHH
Q 022363 147 -----T---ALKADLIVLNTAVAGKWLD 166 (298)
Q Consensus 147 -----~---A~~aDLVIaNT~v~g~wl~ 166 (298)
+ ...+|.||.-|-....+.+
T Consensus 87 ~~~v~~~~g~i~ad~vI~A~G~~~~~~~ 114 (180)
T 2ywl_A 87 VFEVETEEGVEKAERLLLCTHKDPTLPS 114 (180)
T ss_dssp SEEEECSSCEEEEEEEEECCTTCCHHHH
T ss_pred EEEEEECCCEEEECEEEECCCCCCCccc
Confidence 1 1257788877776654434
No 404
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=30.44 E-value=2.1e+02 Score=23.85 Aligned_cols=40 Identities=15% Similarity=0.037 Sum_probs=25.8
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
++++|-+|..+.+..--.-++-.+-..+++.|+++.+...
T Consensus 19 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~ 58 (293)
T 2iks_A 19 RTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACS 58 (293)
T ss_dssp CCCEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCcEEEEEeCCCcCcHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 5677888877654332233455556778888998876653
No 405
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=30.43 E-value=75 Score=25.31 Aligned_cols=39 Identities=21% Similarity=0.226 Sum_probs=31.1
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (298)
++--+++||+ +|-.--+.++++.+|+.|..+..+++..+
T Consensus 96 ~~d~vI~iS~----sG~t~~~~~~~~~ak~~g~~vi~IT~~~~ 134 (183)
T 2xhz_A 96 PQDVVIAISN----SGESSEITALIPVLKRLHVPLICITGRPE 134 (183)
T ss_dssp TTCEEEEECS----SSCCHHHHHHHHHHHTTTCCEEEEESCTT
T ss_pred CCCEEEEEeC----CCCCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4455677765 57777889999999999999999997654
No 406
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=30.29 E-value=36 Score=27.42 Aligned_cols=37 Identities=14% Similarity=0.121 Sum_probs=30.6
Q ss_pred HHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 95 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 95 eLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
.++..|++.|.++++..+-++ +-.++|.++||+++..
T Consensus 67 ~~a~~L~~~gv~vVI~g~IG~--------~a~~~L~~~GI~v~~~ 103 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVRGIGR--------RAIAAFEAMGVKVIKG 103 (136)
T ss_dssp CHHHHHHHTTCSEEECSCCCH--------HHHHHHHHTTCEEECS
T ss_pred HHHHHHHHCCCCEEEECCCCH--------HHHHHHHHCCCEEEec
Confidence 678889999999998886654 4568999999999974
No 407
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=30.28 E-value=85 Score=33.00 Aligned_cols=74 Identities=15% Similarity=0.155 Sum_probs=49.0
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhh
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTAL 149 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~ 149 (298)
.=++||+|.++--|- =--+-+......|+..|++|.+++.++|. +. -..|+.+..+....... ..
T Consensus 596 ~ti~grKVaILlaDG---fEe~El~~pvdaLr~AG~~V~vVS~~~g~----V~-------gs~G~~V~aD~t~~~v~-s~ 660 (753)
T 3ttv_A 596 GDVKGRVVAILLNDE---VRSADLLAILKALKAKGVHAKLLYSRMGE----VT-------ADDGTVLPIAATFAGAP-SL 660 (753)
T ss_dssp CCCTTCEEEEECCTT---CCHHHHHHHHHHHHHHTCEEEEEESSSSE----EE-------CTTSCEEECCEETTTSC-GG
T ss_pred CCCCCCEEEEEecCC---CCHHHHHHHHHHHHHCCCEEEEEEcCCCe----EE-------eCCCCEEecccchhhCC-Cc
Confidence 346788887775542 12346788889999999999999966542 21 12588777664443333 45
Q ss_pred ccCEEEEec
Q 022363 150 KADLIVLNT 158 (298)
Q Consensus 150 ~aDLVIaNT 158 (298)
.||.||+=-
T Consensus 661 ~fDALVVPG 669 (753)
T 3ttv_A 661 TVDAVIVPC 669 (753)
T ss_dssp GCSEEEECC
T ss_pred CCCEEEECC
Confidence 799998843
No 408
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=30.20 E-value=1.9e+02 Score=24.43 Aligned_cols=17 Identities=6% Similarity=0.145 Sum_probs=9.4
Q ss_pred HHhCCCCCCEEEEEeccc
Q 022363 262 ESLGVRNEDLLFAIINSM 279 (298)
Q Consensus 262 ~~lGl~~ddvlv~~~~sv 279 (298)
+++|+| +|+-|.+....
T Consensus 202 ~~~G~p-~dv~vvg~d~~ 218 (313)
T 2h3h_A 202 KNAGKV-GKVKIVCFDTT 218 (313)
T ss_dssp HHTTCT-TTSEEEEECCC
T ss_pred HHcCCC-CCeEEEEeCCC
Confidence 346765 45655555543
No 409
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=30.18 E-value=47 Score=25.73 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=30.1
Q ss_pred HHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 95 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 95 eLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
.++..|...|.++++..+-++ +-...|.++||+++..
T Consensus 56 ~~~~~l~~~gv~~vi~~~iG~--------~a~~~L~~~GI~v~~~ 92 (124)
T 1eo1_A 56 RTAQIIANNGVKAVIASSPGP--------NAFEVLNELGIKIYRA 92 (124)
T ss_dssp THHHHHHHTTCCEEEECCSSH--------HHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHCCCCEEEECCcCH--------HHHHHHHHCCCEEEEc
Confidence 577888899999999886654 4568888999999974
No 410
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=30.10 E-value=40 Score=25.74 Aligned_cols=37 Identities=14% Similarity=0.019 Sum_probs=30.1
Q ss_pred HHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh
Q 022363 95 ELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 95 eLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
.++..|...|.++++..+-++ +-.++|.++||+++..
T Consensus 53 ~~~~~l~~~gv~~vi~~~iG~--------~a~~~L~~~GI~v~~~ 89 (116)
T 1rdu_A 53 KVVQSLVSKGVEYLIASNVGR--------NAFETLKAAGVKVYRF 89 (116)
T ss_dssp SHHHHHHTTTCCEEECSSCCS--------SCHHHHHTTTCEEECC
T ss_pred HHHHHHHHcCCCEEEECCCCH--------hHHHHHHHCCCEEEEC
Confidence 578889999999998886655 3468899999999974
No 411
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=30.08 E-value=2.5e+02 Score=25.75 Aligned_cols=80 Identities=13% Similarity=0.112 Sum_probs=41.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCC-eEEEEeccCCCCchhhhhhhHHHHHHc-CC--ceeehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGT-KVNWITIQKPSEEDEVIYSLEHKMWDR-GV--QVISAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~-~V~vL~~~~G~~~g~v~~~L~~kll~r-gI--~v~~~k~~~~i~- 146 (298)
.+||++|++. + |+ .---.+..|.+.|. +|.+ .++.+.. .+-...|.+++.++ +. .+.+-.....+.
T Consensus 152 l~gk~~lVlG--a---GG--~g~aia~~L~~~Ga~~V~i-~nR~~~~-~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~ 222 (315)
T 3tnl_A 152 IIGKKMTICG--A---GG--AATAICIQAALDGVKEISI-FNRKDDF-YANAEKTVEKINSKTDCKAQLFDIEDHEQLRK 222 (315)
T ss_dssp CTTSEEEEEC--C---SH--HHHHHHHHHHHTTCSEEEE-EECSSTT-HHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred ccCCEEEEEC--C---Ch--HHHHHHHHHHHCCCCEEEE-EECCCch-HHHHHHHHHHhhhhcCCceEEeccchHHHHHh
Confidence 4789999987 2 32 23345677778898 5655 4454321 11112334444443 32 222211122333
Q ss_pred hhhccCEEEEechh
Q 022363 147 TALKADLIVLNTAV 160 (298)
Q Consensus 147 ~A~~aDLVIaNT~v 160 (298)
...++|+||.-|-+
T Consensus 223 ~l~~aDiIINaTp~ 236 (315)
T 3tnl_A 223 EIAESVIFTNATGV 236 (315)
T ss_dssp HHHTCSEEEECSST
T ss_pred hhcCCCEEEECccC
Confidence 35689988866654
No 412
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=30.01 E-value=2.8e+02 Score=24.22 Aligned_cols=89 Identities=13% Similarity=0.152 Sum_probs=48.4
Q ss_pred CccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCC-----CchhhhhhhHHHHHHcCCceeeh--
Q 022363 67 SPLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPS-----EEDEVIYSLEHKMWDRGVQVISA-- 139 (298)
Q Consensus 67 ~~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~-----~~g~v~~~L~~kll~rgI~v~~~-- 139 (298)
....-++||.+|+. .|+.=+=.++|+.|.+.|++|+++....+. ...+-...+.+++...|..+...
T Consensus 20 ~~m~~l~gk~vlVT------Gas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (322)
T 3qlj_A 20 GSMGVVDGRVVIVT------GAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGS 93 (322)
T ss_dssp --CCTTTTCEEEET------TTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECC
T ss_pred chhcccCCCEEEEE------CCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEEC
Confidence 34455788866652 122335578999999999999887633110 00111223455666555444321
Q ss_pred --hchhHHH--------hhhccCEEEEechhc
Q 022363 140 --KGQETIN--------TALKADLIVLNTAVA 161 (298)
Q Consensus 140 --k~~~~i~--------~A~~aDLVIaNT~v~ 161 (298)
....+++ .....|.+|.|..+.
T Consensus 94 Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 125 (322)
T 3qlj_A 94 NVADWDQAAGLIQTAVETFGGLDVLVNNAGIV 125 (322)
T ss_dssp CTTSHHHHHHHHHHHHHHHSCCCEEECCCCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 2222222 224789999887653
No 413
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=29.99 E-value=2.4e+02 Score=23.40 Aligned_cols=78 Identities=21% Similarity=0.157 Sum_probs=43.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
+++|+||+.. -+| -+=.++++.|.+.|++|.++... . ... ..+.+++...+..+. +-....+++
T Consensus 12 l~~k~vlITG----asg--giG~~la~~l~~~G~~V~~~~r~-~---~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 80 (266)
T 1xq1_A 12 LKAKTVLVTG----GTK--GIGHAIVEEFAGFGAVIHTCARN-E---YEL-NECLSKWQKKGFQVTGSVCDASLRPEREK 80 (266)
T ss_dssp CTTCEEEETT----TTS--HHHHHHHHHHHHTTCEEEEEESC-H---HHH-HHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEEC----CCC--HHHHHHHHHHHHCCCEEEEEeCC-H---HHH-HHHHHHHHhcCCeeEEEECCCCCHHHHHH
Confidence 5778766532 223 35578999999999998877632 1 111 122334444443322 112222222
Q ss_pred ---h----h-hccCEEEEechh
Q 022363 147 ---T----A-LKADLIVLNTAV 160 (298)
Q Consensus 147 ---~----A-~~aDLVIaNT~v 160 (298)
. . .++|.||.|..+
T Consensus 81 ~~~~~~~~~~~~id~li~~Ag~ 102 (266)
T 1xq1_A 81 LMQTVSSMFGGKLDILINNLGA 102 (266)
T ss_dssp HHHHHHHHHTTCCSEEEEECCC
T ss_pred HHHHHHHHhCCCCcEEEECCCC
Confidence 1 1 578999999765
No 414
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=29.98 E-value=1.3e+02 Score=29.28 Aligned_cols=74 Identities=18% Similarity=0.196 Sum_probs=41.2
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchh-hhhhhHHHHHHcCCceeehh---chhHHH--hh
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDE-VIYSLEHKMWDRGVQVISAK---GQETIN--TA 148 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~-v~~~L~~kll~rgI~v~~~k---~~~~i~--~A 148 (298)
|.++|.|+|++. .-.+.|.+.|++|+.+..+.+...+. ...+..+...+.|||++.-. ..+.++ ..
T Consensus 2 ri~~~~s~~~~~--------~~l~~l~~~~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~~~~~~~l~~ 73 (660)
T 1z7e_A 2 KTVVFAYHDMGC--------LGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQ 73 (660)
T ss_dssp EEEEEECHHHHH--------HHHHHHHHTTCEEEEEECCCC--------CCHHHHHHHHTCCEECCSCTTSHHHHHHHHH
T ss_pred EEEEEEeCHHHH--------HHHHHHHhCCCCEEEEEeCCCCCccCcCccHHHHHHHHcCCCEeccCCCCcHHHHHHHHh
Confidence 345566655432 22344445599998888664332221 22356778888899998542 222222 35
Q ss_pred hccCEEEE
Q 022363 149 LKADLIVL 156 (298)
Q Consensus 149 ~~aDLVIa 156 (298)
.++|+||+
T Consensus 74 ~~~d~iv~ 81 (660)
T 1z7e_A 74 LSPDVIFS 81 (660)
T ss_dssp HCCSEEEE
T ss_pred cCCCEEEE
Confidence 69999986
No 415
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=29.97 E-value=1.3e+02 Score=28.30 Aligned_cols=81 Identities=10% Similarity=0.004 Sum_probs=47.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--eehhchhHHHhhh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--ISAKGQETINTAL 149 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v--~~~k~~~~i~~A~ 149 (298)
.+|.+|.+|..--|++ .-.++..+...|.+|.+.+-++=...++++.-+++...+.|..+ ..+ . -....
T Consensus 153 l~gl~ia~vGD~~~~v-----a~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d--~--~eav~ 223 (333)
T 1duv_G 153 FNEMTLVYAGDARNNM-----GNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTED--V--AKGVE 223 (333)
T ss_dssp GGGCEEEEESCTTSHH-----HHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESC--H--HHHHT
T ss_pred CCCcEEEEECCCccch-----HHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEEC--H--HHHhC
Confidence 5789999998732433 33444445455999999883322222334333333344667544 333 1 12467
Q ss_pred ccCEEEEechhc
Q 022363 150 KADLIVLNTAVA 161 (298)
Q Consensus 150 ~aDLVIaNT~v~ 161 (298)
++|.|+..+.++
T Consensus 224 ~aDvvytd~w~s 235 (333)
T 1duv_G 224 GADFIYTDVWVS 235 (333)
T ss_dssp TCSEEEECCSSC
T ss_pred CCCEEEeCCccc
Confidence 999999988853
No 416
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=29.96 E-value=78 Score=23.34 Aligned_cols=37 Identities=27% Similarity=0.288 Sum_probs=27.2
Q ss_pred cccccccEEEEEeccCCCCCchHHHHHHHHHHHhCC-CeEEEEe
Q 022363 69 LSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG-TKVNWIT 111 (298)
Q Consensus 69 ~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G-~~V~vL~ 111 (298)
...-.+++||+|..| |...-.+...|.+.| ++|....
T Consensus 15 ~~~~~~~~ilivdd~------~~~~~~l~~~L~~~g~~~v~~~~ 52 (146)
T 4dad_A 15 LYFQGMINILVASED------ASRLAHLARLVGDAGRYRVTRTV 52 (146)
T ss_dssp CCCGGGCEEEEECSC------HHHHHHHHHHHHHHCSCEEEEEC
T ss_pred CCcCCCCeEEEEeCC------HHHHHHHHHHHhhCCCeEEEEeC
Confidence 334467889999765 567777888999988 8877643
No 417
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=29.85 E-value=1.9e+02 Score=24.10 Aligned_cols=36 Identities=17% Similarity=0.251 Sum_probs=24.5
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
++||.+|+.. |+-=+=.++|+.|.+.|++|.++..+
T Consensus 5 l~~k~~lVTG------as~gIG~aia~~l~~~G~~V~~~~r~ 40 (257)
T 3tpc_A 5 LKSRVFIVTG------ASSGLGAAVTRMLAQEGATVLGLDLK 40 (257)
T ss_dssp CTTCEEEEES------TTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCEEEEeC------CCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4567655542 22235578999999999998877644
No 418
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=29.82 E-value=2.3e+02 Score=23.19 Aligned_cols=81 Identities=11% Similarity=0.151 Sum_probs=45.2
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcC---Cceee--h--hch
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRG---VQVIS--A--KGQ 142 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rg---I~v~~--~--k~~ 142 (298)
.-++||++|+.. |+.=+=.++|+.|.+.|++|.++... .+ -...+.+++.+.+ ..++. - ...
T Consensus 10 ~~l~~k~vlITG------as~gIG~~ia~~l~~~G~~V~~~~r~-~~----~~~~~~~~~~~~~~~~~~~~~~d~d~~~~ 78 (247)
T 3i1j_A 10 ELLKGRVILVTG------AARGIGAAAARAYAAHGASVVLLGRT-EA----SLAEVSDQIKSAGQPQPLIIALNLENATA 78 (247)
T ss_dssp TTTTTCEEEESS------TTSHHHHHHHHHHHHTTCEEEEEESC-HH----HHHHHHHHHHHTTSCCCEEEECCTTTCCH
T ss_pred ccCCCCEEEEeC------CCChHHHHHHHHHHHCCCEEEEEecC-HH----HHHHHHHHHHhcCCCCceEEEeccccCCH
Confidence 457888776643 22235568899999999998776532 21 1123345555443 11221 1 122
Q ss_pred hHHH--------hhhccCEEEEechhc
Q 022363 143 ETIN--------TALKADLIVLNTAVA 161 (298)
Q Consensus 143 ~~i~--------~A~~aDLVIaNT~v~ 161 (298)
++++ .....|.+|.|..+.
T Consensus 79 ~~~~~~~~~~~~~~g~id~lv~nAg~~ 105 (247)
T 3i1j_A 79 QQYRELAARVEHEFGRLDGLLHNASII 105 (247)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCccC
Confidence 2222 234799999998753
No 419
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=29.79 E-value=2e+02 Score=24.31 Aligned_cols=83 Identities=14% Similarity=0.228 Sum_probs=45.5
Q ss_pred EEEEEeccCCCCCchHHHHH-HHHHHHhC-CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee--hhchhHHHhhhcc
Q 022363 76 LVLLVSHELSLSGGPLLLME-LAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--AKGQETINTALKA 151 (298)
Q Consensus 76 kILLISHELS~TGAPLlLle-LA~~Lkq~-G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~--~k~~~~i~~A~~a 151 (298)
+||+|..-....|.--.|.+ ++..|++. |.+|.++-..+-+...-. +-.......|..... +...+..+...++
T Consensus 3 kIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~dl~~~~~~~~~--~~~~~c~~~~~~~~~~~~~~~~~~~~l~~A 80 (242)
T 1sqs_A 3 KIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPFNSELEISN--SDSEELFKKGIDRQSNADDGGVIKKELLES 80 (242)
T ss_dssp EEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEECTTTCCCCCCC--CCHHHHHHHCCCSSTTTSTHHHHHHHHHHC
T ss_pred eEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEEcccCCCCCCC--chHHhhccCCCCccchHHHHHHHHHHHHHC
Confidence 68888766654465555555 56788887 999988764432110000 000122223332222 2223334467899
Q ss_pred CEEEEechh
Q 022363 152 DLIVLNTAV 160 (298)
Q Consensus 152 DLVIaNT~v 160 (298)
|.||..|=+
T Consensus 81 D~iI~~sP~ 89 (242)
T 1sqs_A 81 DIIIISSPV 89 (242)
T ss_dssp SEEEEEEEE
T ss_pred CEEEEEccc
Confidence 999998743
No 420
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=29.73 E-value=1e+02 Score=26.31 Aligned_cols=70 Identities=13% Similarity=0.227 Sum_probs=34.8
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce---eeh---hchhHHHh
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV---ISA---KGQETINT 147 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v---~~~---k~~~~i~~ 147 (298)
|+.+||= ++..|+. ++...+. .|..|.+++-. ..-+++.+.++|-.- +.. +....+..
T Consensus 108 G~illLD---LD~~~~~----~i~~~l~-~~~tI~i~th~--------~~~l~~Rl~~rG~~~~e~i~~rl~~a~~e~~~ 171 (219)
T 1s96_A 108 GVDVFLD---IDWQGAQ----QIRQKMP-HARSIFILPPS--------KIELDRRLRGRGQDSEEVIAKRMAQAVAEMSH 171 (219)
T ss_dssp TCEEEEE---CCHHHHH----HHHHHCT-TCEEEEEECSS--------HHHHHHHHHTTSCSCHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEE---ECHHHHH----HHHHHcc-CCEEEEEECCC--------HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhh
Confidence 5555554 5555554 3344444 36655555511 113566677777211 000 11112223
Q ss_pred hhccCEEEEech
Q 022363 148 ALKADLIVLNTA 159 (298)
Q Consensus 148 A~~aDLVIaNT~ 159 (298)
...||.+|.|.-
T Consensus 172 ~~~~d~~i~Nd~ 183 (219)
T 1s96_A 172 YAEYDYLIVNDD 183 (219)
T ss_dssp GGGSSEEEECSS
T ss_pred ccCCCEEEECcC
Confidence 468999999964
No 421
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=29.71 E-value=1.3e+02 Score=26.39 Aligned_cols=71 Identities=18% Similarity=0.165 Sum_probs=42.7
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCC--CeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--h-c-hhHH-H-
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVG--TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--K-G-QETI-N- 146 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G--~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k-~-~~~i-~- 146 (298)
|-.+|+| |.+--|..+...+++.+ ++|+.+.+++++.. + .+...+.|||++.- + . .+++ +
T Consensus 10 ri~vl~S------G~gsnl~all~~~~~~~~~~~I~~Vis~~~~a~-----~-l~~A~~~gIp~~~~~~~~~~~~~~~~~ 77 (215)
T 3kcq_A 10 RVGVLIS------GRGSNLEALAKAFSTEESSVVISCVISNNAEAR-----G-LLIAQSYGIPTFVVKRKPLDIEHISTV 77 (215)
T ss_dssp EEEEEES------SCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCT-----H-HHHHHHTTCCEEECCBTTBCHHHHHHH
T ss_pred EEEEEEE------CCcHHHHHHHHHHHcCCCCcEEEEEEeCCcchH-----H-HHHHHHcCCCEEEeCcccCChHHHHHH
Confidence 3446665 34446777777776643 68887776554321 2 35677889999842 1 1 1222 2
Q ss_pred -hhhccCEEEEe
Q 022363 147 -TALKADLIVLN 157 (298)
Q Consensus 147 -~A~~aDLVIaN 157 (298)
...++|+|++-
T Consensus 78 L~~~~~Dlivla 89 (215)
T 3kcq_A 78 LREHDVDLVCLA 89 (215)
T ss_dssp HHHTTCSEEEES
T ss_pred HHHhCCCEEEEe
Confidence 35689999974
No 422
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=29.66 E-value=1.9e+02 Score=27.27 Aligned_cols=43 Identities=21% Similarity=0.303 Sum_probs=30.3
Q ss_pred cEEEEEeccCCCCCchHHH--HHHHHHHHhCCCeEEEEeccCCCCchhh
Q 022363 75 KLVLLVSHELSLSGGPLLL--MELAFLLRGVGTKVNWITIQKPSEEDEV 121 (298)
Q Consensus 75 KkILLISHELS~TGAPLlL--leLA~~Lkq~G~~V~vL~~~~G~~~g~v 121 (298)
|+|++|-. .+|.=|++ +=|++.|++.|.+|++.+..+| .-+++
T Consensus 213 k~Vl~v~D---NAG~Eiv~D~L~La~~Ll~~g~kVvl~vK~~P-~vnDv 257 (367)
T 1xfi_A 213 KKAVIFVD---NSGADIILGILPFARELLRRGAQVVLAANELP-SINDI 257 (367)
T ss_dssp CEEEEECC---BTTHHHHHTHHHHHHHHHHTTCEEEEEEBSSC-CTTBC
T ss_pred CEEEEEec---CCCchhhccHHHHHHHHHHcCCEEEEEECCcC-ceeeC
Confidence 78999965 56755554 4589999999998887775554 44433
No 423
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=29.61 E-value=3e+02 Score=24.80 Aligned_cols=83 Identities=13% Similarity=0.155 Sum_probs=47.5
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchh---hhhhhHHHHHHcCCceee----hhchh
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDE---VIYSLEHKMWDRGVQVIS----AKGQE 143 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~---v~~~L~~kll~rgI~v~~----~k~~~ 143 (298)
-++||.+|+.. -+| =+=.++|+.|.+.|++|+++...... ... -...+.+++...|.++.. -...+
T Consensus 42 ~l~gk~vlVTG----as~--GIG~aia~~La~~Ga~Vvl~~r~~~~-~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~ 114 (346)
T 3kvo_A 42 RLAGCTVFITG----ASR--GIGKAIALKAAKDGANIVIAAKTAQP-HPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQ 114 (346)
T ss_dssp TTTTCEEEEET----TTS--HHHHHHHHHHHTTTCEEEEEESCCSC-CSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHH
T ss_pred CCCCCEEEEeC----CCh--HHHHHHHHHHHHCCCEEEEEECChhh-hhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHH
Confidence 46788776643 122 25568899999999998887743321 111 122345566655544431 12222
Q ss_pred HHH--------hhhccCEEEEechh
Q 022363 144 TIN--------TALKADLIVLNTAV 160 (298)
Q Consensus 144 ~i~--------~A~~aDLVIaNT~v 160 (298)
+++ .....|.+|.|..+
T Consensus 115 ~v~~~~~~~~~~~g~iDilVnnAG~ 139 (346)
T 3kvo_A 115 QISAAVEKAIKKFGGIDILVNNASA 139 (346)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 232 23489999999765
No 424
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=29.40 E-value=96 Score=27.01 Aligned_cols=40 Identities=13% Similarity=0.158 Sum_probs=24.6
Q ss_pred ccccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 68 PLSFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 68 ~~~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
+..-++||++|+..=--+ .=+=.++|+.|.+.|+.|.++.
T Consensus 25 ~~~~l~gk~~lVTGasg~----~GIG~aia~~la~~G~~V~~~~ 64 (293)
T 3grk_A 25 QSGLLQGKRGLILGVANN----RSIAWGIAKAAREAGAELAFTY 64 (293)
T ss_dssp --CTTTTCEEEEECCCSS----SSHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCCCCEEEEEcCCCC----CcHHHHHHHHHHHCCCEEEEEc
Confidence 334478887776432110 1134578899999999987765
No 425
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=29.36 E-value=2.2e+02 Score=26.34 Aligned_cols=79 Identities=18% Similarity=0.167 Sum_probs=49.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--eehhchhHHHhhh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--ISAKGQETINTAL 149 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v--~~~k~~~~i~~A~ 149 (298)
.+|++|.+|..- |+ +.-.++..+...|.+|.+.+-++=...++++.-+++...+.|..+ .++ . -+...
T Consensus 153 l~gl~va~vGD~-~r-----va~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d--~--~eav~ 222 (315)
T 1pvv_A 153 IKGVKVVYVGDG-NN-----VAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHD--P--VKAVK 222 (315)
T ss_dssp CTTCEEEEESCC-CH-----HHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESC--H--HHHTT
T ss_pred cCCcEEEEECCC-cc-----hHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeC--H--HHHhC
Confidence 589999999873 44 455666667777999999984332223334333333334667544 333 1 12567
Q ss_pred ccCEEEEechh
Q 022363 150 KADLIVLNTAV 160 (298)
Q Consensus 150 ~aDLVIaNT~v 160 (298)
++|.|+.-+.+
T Consensus 223 ~aDvvy~~~w~ 233 (315)
T 1pvv_A 223 DADVIYTDVWA 233 (315)
T ss_dssp TCSEEEECCCC
T ss_pred CCCEEEEccee
Confidence 99999998875
No 426
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=29.30 E-value=77 Score=27.77 Aligned_cols=40 Identities=13% Similarity=0.134 Sum_probs=27.8
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (298)
+.|+|++- .+.+-|-+-..+|++.|++.|++|+++..+.+
T Consensus 3 ~~k~Illg---vTGaiaa~k~~~ll~~L~~~g~eV~vv~T~~A 42 (209)
T 3zqu_A 3 GPERITLA---MTGASGAQYGLRLLDCLVQEEREVHFLISKAA 42 (209)
T ss_dssp SCSEEEEE---ECSSSCHHHHHHHHHHHHHTTCEEEEEECHHH
T ss_pred CCCEEEEE---EECHHHHHHHHHHHHHHHHCCCEEEEEECccH
Confidence 34666654 23332334578999999999999999996653
No 427
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=29.27 E-value=1.7e+02 Score=25.49 Aligned_cols=37 Identities=19% Similarity=0.291 Sum_probs=27.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHh--CCCeEEEEeccC
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRG--VGTKVNWITIQK 114 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq--~G~~V~vL~~~~ 114 (298)
|++|+||+.+ -|| -+=-++++.|.+ .|++|.++....
T Consensus 8 ~~~~~vlVTG----atG--~IG~~l~~~L~~~~~g~~V~~~~r~~ 46 (362)
T 3sxp_A 8 LENQTILITG----GAG--FVGSNLAFHFQENHPKAKVVVLDKFR 46 (362)
T ss_dssp CTTCEEEEET----TTS--HHHHHHHHHHHHHCTTSEEEEEECCC
T ss_pred cCCCEEEEEC----CCC--HHHHHHHHHHHhhCCCCeEEEEECCC
Confidence 5678877753 233 366788899998 899999988543
No 428
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=29.20 E-value=1.8e+02 Score=26.99 Aligned_cols=47 Identities=19% Similarity=0.273 Sum_probs=31.1
Q ss_pred HHHHHHHHHhCCCeEEEEe-c-cCCC----------------CchhhhhhhHHHHHHcCCceeeh
Q 022363 93 LMELAFLLRGVGTKVNWIT-I-QKPS----------------EEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 93 LleLA~~Lkq~G~~V~vL~-~-~~G~----------------~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+.+-..+|++.|++.+||. . +.+. ++.+-+.-|.+++-++||.|+.|
T Consensus 52 i~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD 116 (475)
T 2z1k_A 52 VAEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILD 116 (475)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHhHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 4566799999999999998 1 1111 22333345666777778888766
No 429
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=29.18 E-value=1.1e+02 Score=19.99 Aligned_cols=32 Identities=19% Similarity=0.421 Sum_probs=24.5
Q ss_pred cCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEE
Q 022363 238 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFA 274 (298)
Q Consensus 238 ~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~ 274 (298)
+.+++.-+ .+.+. +-+.+.+.+|+|++++-|.
T Consensus 13 g~s~e~k~----~l~~~-l~~~l~~~lg~p~~~v~v~ 44 (63)
T 2x4k_A 13 GRSDEQLK----NLVSE-VTDAVEKTTGANRQAIHVV 44 (63)
T ss_dssp CCCHHHHH----HHHHH-HHHHHHHHHCCCGGGCEEE
T ss_pred CCCHHHHH----HHHHH-HHHHHHHHhCcCcccEEEE
Confidence 45666555 77777 7888999999999887664
No 430
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=29.08 E-value=2.1e+02 Score=26.79 Aligned_cols=81 Identities=10% Similarity=0.066 Sum_probs=49.4
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCce--eehhchhHHHhhh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQV--ISAKGQETINTAL 149 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v--~~~k~~~~i~~A~ 149 (298)
.+|++|.+|..--|+ +.-.++..+...|.+|.+.+-++=...++++.-+++...+.|..+ ..+ . -....
T Consensus 153 l~gl~va~vGD~~~~-----va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d--~--~eav~ 223 (335)
T 1dxh_A 153 LHDISYAYLGDARNN-----MGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTED--P--KEAVK 223 (335)
T ss_dssp GGGCEEEEESCCSSH-----HHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESC--H--HHHTT
T ss_pred cCCeEEEEecCCccc-----hHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeC--H--HHHhC
Confidence 579999999873233 445555566667999999983322223334333333344667554 333 1 12567
Q ss_pred ccCEEEEechhc
Q 022363 150 KADLIVLNTAVA 161 (298)
Q Consensus 150 ~aDLVIaNT~v~ 161 (298)
++|.|+..+.++
T Consensus 224 ~aDvvytd~w~s 235 (335)
T 1dxh_A 224 GVDFVHTDVWVS 235 (335)
T ss_dssp TCSEEEECCCSC
T ss_pred CCCEEEeCCccc
Confidence 999999988853
No 431
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=28.98 E-value=1.2e+02 Score=25.60 Aligned_cols=45 Identities=16% Similarity=0.169 Sum_probs=34.2
Q ss_pred ccccccEEEEEeccCCCC-CchH----HHHHHHHHHHhCCC-eEEEEeccC
Q 022363 70 SFMKSKLVLLVSHELSLS-GGPL----LLMELAFLLRGVGT-KVNWITIQK 114 (298)
Q Consensus 70 ~f~~~KkILLISHELS~T-GAPL----lLleLA~~Lkq~G~-~V~vL~~~~ 114 (298)
+|.+||+++|+++=.+-| |-+. -+-+++..+++.|. +|..++.+.
T Consensus 43 d~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~ 93 (176)
T 4f82_A 43 DQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVND 93 (176)
T ss_dssp HHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSC
T ss_pred HHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 466999999999999888 4444 24556678899999 888887543
No 432
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=28.82 E-value=71 Score=28.50 Aligned_cols=80 Identities=13% Similarity=0.142 Sum_probs=47.1
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc--------hhH
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG--------QET 144 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~--------~~~ 144 (298)
+.++|.+|. +|+ +=.-+|..|.+.|++|.++... . -.+.+.+.|+.+....+ ...
T Consensus 2 ~~mkI~IiG-----aG~--~G~~~a~~L~~~g~~V~~~~r~-~---------~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 64 (335)
T 3ghy_A 2 SLTRICIVG-----AGA--VGGYLGARLALAGEAINVLARG-A---------TLQALQTAGLRLTEDGATHTLPVRATHD 64 (335)
T ss_dssp CCCCEEEES-----CCH--HHHHHHHHHHHTTCCEEEECCH-H---------HHHHHHHTCEEEEETTEEEEECCEEESC
T ss_pred CCCEEEEEC-----cCH--HHHHHHHHHHHCCCEEEEEECh-H---------HHHHHHHCCCEEecCCCeEEEeeeEECC
Confidence 345677774 343 4445678888899999888732 1 13566677776542110 111
Q ss_pred HHhhhccCEEEEechhchHHHHHHhhc
Q 022363 145 INTALKADLIVLNTAVAGKWLDAVLKE 171 (298)
Q Consensus 145 i~~A~~aDLVIaNT~v~g~wl~~l~~~ 171 (298)
...+..+|+||+.+=. ..++++++.
T Consensus 65 ~~~~~~~D~Vilavk~--~~~~~~~~~ 89 (335)
T 3ghy_A 65 AAALGEQDVVIVAVKA--PALESVAAG 89 (335)
T ss_dssp HHHHCCCSEEEECCCH--HHHHHHHGG
T ss_pred HHHcCCCCEEEEeCCc--hhHHHHHHH
Confidence 2235789999998754 344555433
No 433
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=28.76 E-value=71 Score=26.09 Aligned_cols=38 Identities=18% Similarity=0.248 Sum_probs=29.8
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (298)
+.-+++||+ +|-.--+.++++.+|+.|..++.+++..+
T Consensus 93 ~dvvI~iS~----sG~t~~~~~~~~~ak~~g~~vi~IT~~~~ 130 (201)
T 3fxa_A 93 EDILILISK----GGNTGELLNLIPACKTKGSTLIGVTENPD 130 (201)
T ss_dssp TCEEEEECS----SSCCHHHHTTHHHHHHHTCEEEEEESCTT
T ss_pred CCEEEEEeC----CCCCHHHHHHHHHHHHcCCeEEEEECCCC
Confidence 445566654 66667788999999999999999997654
No 434
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=28.71 E-value=1.5e+02 Score=24.24 Aligned_cols=89 Identities=13% Similarity=0.044 Sum_probs=46.3
Q ss_pred ccEEEEEe-ccCCCCCchHHHHHHHHHHHhCCC--eEEEEe-ccCC-CCchhhhhhhHHHHHHcCCceeehhchhHH--H
Q 022363 74 SKLVLLVS-HELSLSGGPLLLMELAFLLRGVGT--KVNWIT-IQKP-SEEDEVIYSLEHKMWDRGVQVISAKGQETI--N 146 (298)
Q Consensus 74 ~KkILLIS-HELS~TGAPLlLleLA~~Lkq~G~--~V~vL~-~~~G-~~~g~v~~~L~~kll~rgI~v~~~k~~~~i--~ 146 (298)
.++||||. ++--|+ |+.=-=+-.++.+.|. .+.+-+ |-.+ ..++.+-+.-.+-+.++||..- .+ -+++ .
T Consensus 4 ~~~VLFVC~gN~cRS--pmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s-~~-ar~l~~~ 79 (161)
T 2cwd_A 4 PVRVLFVCLGNICRS--PMAEGIFRKLLKERGLEDRFEVDSAGTGAWHVGEPMDPRARRVLEEEGAYFP-HV-ARRLTRE 79 (161)
T ss_dssp CEEEEEEESSSSSHH--HHHHHHHHHHHHHHTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHHTCCCC-CC-CCBCCHH
T ss_pred CCEEEEECCCcHHHH--HHHHHHHHHHHHHcCCCCcEEEEecccCCCccCCCCCHHHHHHHHHcCcCcc-cc-ccCCCHh
Confidence 35899994 444444 4332222344444453 455544 3322 1122333344566777799885 32 2223 2
Q ss_pred hhhccCEEEEechhchHHHH
Q 022363 147 TALKADLIVLNTAVAGKWLD 166 (298)
Q Consensus 147 ~A~~aDLVIaNT~v~g~wl~ 166 (298)
....||+||+=+--....+.
T Consensus 80 ~~~~~DlIi~M~~~~~~~l~ 99 (161)
T 2cwd_A 80 DVLAYDHILVMDRENLEEVL 99 (161)
T ss_dssp HHHHCSEEEESSHHHHHHHH
T ss_pred HhccCCEEEECChHHHHHHH
Confidence 35789999986654444443
No 435
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=28.65 E-value=1.2e+02 Score=25.57 Aligned_cols=39 Identities=33% Similarity=0.363 Sum_probs=30.7
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHh--CCCeEEEEeccCC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRG--VGTKVNWITIQKP 115 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq--~G~~V~vL~~~~G 115 (298)
++.-+++||+ +|-.--++++++.+|+ .|..++.+++..+
T Consensus 106 ~~DlvI~iS~----SG~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~ 146 (220)
T 3etn_A 106 ENDLLLLISN----SGKTREIVELTQLAHNLNPGLKFIVITGNPD 146 (220)
T ss_dssp TTCEEEEECS----SSCCHHHHHHHHHHHHHCTTCEEEEEESCTT
T ss_pred CCCEEEEEcC----CCCCHHHHHHHHHHHhcCCCCeEEEEECCCC
Confidence 3445666655 6777788999999999 9999999997654
No 436
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=28.63 E-value=91 Score=24.96 Aligned_cols=59 Identities=12% Similarity=-0.036 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHHhhhccCEEEEechh
Q 022363 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETINTALKADLIVLNTAV 160 (298)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~~A~~aDLVIaNT~v 160 (298)
+=-++++.|.+.|++|.++..... . .+++...++.++.. ..... ....++|.||.|...
T Consensus 12 iG~~l~~~L~~~g~~V~~~~R~~~--------~-~~~~~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 12 AGSAIVAEARRRGHEVLAVVRDPQ--------K-AADRLGATVATLVKEPLVLTE-ADLDSVDAVVDALSV 72 (224)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCHH--------H-HHHHTCTTSEEEECCGGGCCH-HHHTTCSEEEECCCC
T ss_pred HHHHHHHHHHHCCCEEEEEEeccc--------c-cccccCCCceEEecccccccH-hhcccCCEEEECCcc
Confidence 556888999999999999874321 1 12334456666632 11222 556789999988766
No 437
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=28.56 E-value=2.5e+02 Score=23.17 Aligned_cols=38 Identities=11% Similarity=-0.062 Sum_probs=22.5
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
++|-+|..+.+..--.-++-.+...+++.|+++.+...
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~ 40 (290)
T 2fn9_A 3 GKMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDS 40 (290)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred eEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEeCC
Confidence 45666665544322223445556778888998876653
No 438
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=28.52 E-value=1.8e+02 Score=29.63 Aligned_cols=156 Identities=8% Similarity=0.066 Sum_probs=81.6
Q ss_pred HHHHHHHHHHhCCCeEEEEec--cCCC-------------------------------------CchhhhhhhHHHHHHc
Q 022363 92 LLMELAFLLRGVGTKVNWITI--QKPS-------------------------------------EEDEVIYSLEHKMWDR 132 (298)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~--~~G~-------------------------------------~~g~v~~~L~~kll~r 132 (298)
-+.+-..+|++.|++.++|.- +-+. ++.+-+.-|.+++-++
T Consensus 254 gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~~aH~~ 333 (695)
T 3zss_A 254 TAARRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTEAGKL 333 (695)
T ss_dssp HHGGGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHHHHHHC
Confidence 455667999999999999981 1110 0113334556666666
Q ss_pred CCceeehhchhHHHhhhccCEEEEechhchHHHHHHhhccCCCCCCceEEEeeecccccc---ccccccccccccccccc
Q 022363 133 GVQVISAKGQETINTALKADLIVLNTAVAGKWLDAVLKEDVPRVLPNVLWWIHEMRGHYF---KLDYVKHLPLVAGAMID 209 (298)
Q Consensus 133 gI~v~~~k~~~~i~~A~~aDLVIaNT~v~g~wl~~l~~~~~p~~~~pVIWWIHE~r~~Yf---~l~~vkhLp~v~~~~~~ 209 (298)
||.|+.| ++.|+.....|+...-..........+.++ -.....|. ++|+-..-|.|.-.++
T Consensus 334 GI~VilD--------------~V~Nhs~~~~~~~~~~dwf~~~~dg~~~~~-~~~~~~~~~~~dLn~~n~~p~V~~~l~- 397 (695)
T 3zss_A 334 GLEIALD--------------FALQCSPDHPWVHKHPEWFHHRPDGTIAHA-ENPPKKYQDIYPIAFDADPDGLATETV- 397 (695)
T ss_dssp TCEEEEE--------------ECCEECTTSTHHHHCGGGSCCCTTSCCCCE-EETTEEETTCEECCCSSCHHHHHHHHH-
T ss_pred CCEEEEE--------------eeccCCccchhhhcccceeeecCCCCcccC-CCCCccccccccccccCCcHHHHHHHH-
Confidence 8888766 245776667787654211110000011111 00112232 3554322355555444
Q ss_pred cHHHHHHHHHhcc-cccccccCCceEEEecCcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEEecccChhhHH
Q 022363 210 SHVTAEYWKNRTR-ERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSMNFLLIR 285 (298)
Q Consensus 210 S~AtA~yw~~r~~-~~~~Ikl~~~~vv~L~~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~~~sv~~~~~~ 285 (298)
....||.+ ++ |.-++-.++ -. ..+.++ .+++.+++. .+|.+++|=... +|..+.
T Consensus 398 --~~l~~Wi~-~GVDGfRlD~a~-----~~-~~~f~~---------~~~~~v~~~---~pd~~~vgE~~~-~p~~~~ 452 (695)
T 3zss_A 398 --RILRHWMD-HGVRIFRVDNPH-----TK-PVAFWE---------RVIADINGT---DPDVIFLAEAFT-RPAMMA 452 (695)
T ss_dssp --HHHHHHHH-TTCCEEEESSGG-----GS-CHHHHH---------HHHHHHHHH---CTTCEEEECCCS-CHHHHH
T ss_pred --HHHHHHHH-hCCCEEEecCcc-----hh-hHHHHH---------HHHHHHHhh---CCCceEEEeecC-ChHHhh
Confidence 47888998 77 766665532 11 222333 255556655 467788877663 555443
No 439
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=28.43 E-value=52 Score=27.95 Aligned_cols=33 Identities=30% Similarity=0.383 Sum_probs=27.0
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCC-Ce
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG-TK 106 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G-~~ 106 (298)
..+||+||+| .|.=.||+ -|.+.++.|++.| ..
T Consensus 109 ~~~gk~VlLV-DDVitTG~--Tl~aa~~~L~~~G~a~ 142 (201)
T 1w30_A 109 GIDDALVILV-DDVLYSGR--SVRSALDALRDVGRPR 142 (201)
T ss_dssp CSTTCEEEEE-EEEESSSH--HHHHHHHHHHHHCCCS
T ss_pred cCCCCEEEEE-CCccchHH--HHHHHHHHHHhCCCCc
Confidence 3789998887 77778898 6678999999999 54
No 440
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=28.43 E-value=1.7e+02 Score=23.80 Aligned_cols=71 Identities=24% Similarity=0.257 Sum_probs=43.0
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhccCE
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~aDL 153 (298)
+|||+++-+|-- ..+-+......|+..|+++.++.-.++. .+. ...|+.+..+.....++ ...+|.
T Consensus 5 ~kkv~ill~~g~---~~~e~~~~~~~l~~ag~~v~~~s~~~~~---~v~-------~~~g~~i~~d~~l~~~~-~~~~D~ 70 (190)
T 4e08_A 5 SKSALVILAPGA---EEMEFIIAADVLRRAGIKVTVAGLNGGE---AVK-------CSRDVQILPDTSLAQVA-SDKFDV 70 (190)
T ss_dssp CCEEEEEECTTC---CHHHHHHHHHHHHHTTCEEEEEESSSSS---CEE-------CTTSCEEECSEETGGGT-TCCCSE
T ss_pred CcEEEEEECCCc---hHHHHHHHHHHHHHCCCEEEEEECCCCc---cee-------cCCCcEEECCCCHHHCC-cccCCE
Confidence 466766655411 2334455568899999999999966521 121 13477777664443332 347999
Q ss_pred EEEec
Q 022363 154 IVLNT 158 (298)
Q Consensus 154 VIaNT 158 (298)
||+=-
T Consensus 71 livpG 75 (190)
T 4e08_A 71 VVLPG 75 (190)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 98743
No 441
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=28.40 E-value=66 Score=26.02 Aligned_cols=38 Identities=11% Similarity=0.014 Sum_probs=29.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (298)
+--+++||+ +|-.--+.++++..|+.|..++.+++..+
T Consensus 110 ~DvvI~iS~----SG~t~~~i~~~~~ak~~g~~vI~IT~~~~ 147 (196)
T 2yva_A 110 GDVLLAIST----RGNSRDIVKAVEAAVTRDMTIVALTGYDG 147 (196)
T ss_dssp TCEEEEECS----SSCCHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 344556654 57777888999999999999999997654
No 442
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=28.38 E-value=1.5e+02 Score=28.74 Aligned_cols=47 Identities=19% Similarity=0.329 Sum_probs=32.8
Q ss_pred HHHHHHHHHhCCCeEEEEe--ccCCC----------------CchhhhhhhHHHHHHcCCceeeh
Q 022363 93 LMELAFLLRGVGTKVNWIT--IQKPS----------------EEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 93 LleLA~~Lkq~G~~V~vL~--~~~G~----------------~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+.+-..+|++.|++.++|. -+.+. ++.+-+.-|.+++-++||.|+.|
T Consensus 175 i~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD 239 (585)
T 1wzl_A 175 VIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILD 239 (585)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 4555699999999999998 11111 23344556777777789999876
No 443
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=28.38 E-value=77 Score=27.27 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=28.9
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~ 108 (298)
.-++||+||+| .|.=.||+ -|.++++.|++.|...+
T Consensus 130 ~~v~Gk~VllV-DDii~TG~--Tl~~a~~~L~~~ga~~V 165 (225)
T 2jbh_A 130 STLAGKNVLIV-EDVVGTGR--TMKALLSNIEKYKPNMI 165 (225)
T ss_dssp GGGTTSEEEEE-EEEESSSH--HHHHHHHHHHTTCCSEE
T ss_pred cccCCCEEEEE-ccccCcHH--HHHHHHHHHHhcCCCEE
Confidence 45799999888 67777888 67788999999998633
No 444
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=28.32 E-value=82 Score=22.78 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=24.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEE
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWI 110 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL 110 (298)
|+..+||+|..| |...-.+...|.+.|++|...
T Consensus 1 m~~~~ilivdd~------~~~~~~l~~~L~~~g~~v~~~ 33 (140)
T 2qr3_A 1 MSLGTIIIVDDN------KGVLTAVQLLLKNHFSKVITL 33 (140)
T ss_dssp -CCCEEEEECSC------HHHHHHHHHHHTTTSSEEEEE
T ss_pred CCCceEEEEeCC------HHHHHHHHHHHHhCCcEEEEe
Confidence 456789998876 667778888898889887643
No 445
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=28.30 E-value=55 Score=24.83 Aligned_cols=32 Identities=9% Similarity=0.094 Sum_probs=25.7
Q ss_pred CcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEE
Q 022363 239 NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (298)
Q Consensus 239 ~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~ 275 (298)
.+++.-+ ++.++ +-+.+.+.||++++++.|-.
T Consensus 68 ~~~eqk~----~l~~~-i~~~l~~~lgi~~~~v~I~~ 99 (115)
T 1uiz_A 68 IGGPQNK----SYTKL-LCDILTKQLNIPANRVYINY 99 (115)
T ss_dssp CSHHHHH----HHHHH-HHHHHHHHHCCCGGGEEEEE
T ss_pred CCHHHHH----HHHHH-HHHHHHHHhCcCcceEEEEE
Confidence 5666665 77887 88889999999999987753
No 446
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=28.27 E-value=63 Score=29.13 Aligned_cols=35 Identities=17% Similarity=0.074 Sum_probs=22.0
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
|+||+|.-.-.-.|+ -.+...|++.|++|..+...
T Consensus 5 ~~vLiV~g~~~~~~a----~~l~~aL~~~g~~V~~i~~~ 39 (259)
T 3rht_A 5 TRVLYCGDTSLETAA----GYLAGLMTSWQWEFDYIPSH 39 (259)
T ss_dssp -CEEEEESSCTTTTH----HHHHHHHHHTTCCCEEECTT
T ss_pred ceEEEECCCCchhHH----HHHHHHHHhCCceEEEeccc
Confidence 689999311112243 45667788999999998833
No 447
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=28.23 E-value=1.8e+02 Score=24.37 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=24.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
|+||++|+.. -+| =+=.++|+.|.+.|++|.++..
T Consensus 3 l~~k~vlVTG----as~--gIG~~ia~~l~~~G~~V~~~~r 37 (254)
T 1hdc_A 3 LSGKTVIITG----GAR--GLGAEAARQAVAAGARVVLADV 37 (254)
T ss_dssp CCCSEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC----CCc--HHHHHHHHHHHHCCCEEEEEeC
Confidence 5788776643 222 2556889999999999887763
No 448
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=28.01 E-value=57 Score=24.62 Aligned_cols=32 Identities=13% Similarity=0.277 Sum_probs=25.6
Q ss_pred CcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEE
Q 022363 239 NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (298)
Q Consensus 239 ~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~ 275 (298)
.+++.-+ ++.++ +-+.+.+.||++++++.|-.
T Consensus 67 ~~~eqk~----~l~~~-i~~~l~~~lgi~~~~v~I~~ 98 (113)
T 1hfo_A 67 IEPSRNR----DHSAK-LFDHLNTKLGIPKNRMYIHF 98 (113)
T ss_dssp CSHHHHH----HHHHH-HHHHHHHHHCCCGGGEEEEE
T ss_pred CCHHHHH----HHHHH-HHHHHHHHhCcCcCeEEEEE
Confidence 5666655 77777 88889999999999987753
No 449
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=27.94 E-value=2e+02 Score=23.98 Aligned_cols=35 Identities=14% Similarity=0.127 Sum_probs=24.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
+++|++|+.. -+| -+=.++++.|.+.|++|.++..
T Consensus 10 l~~k~vlVTG----as~--gIG~~ia~~l~~~G~~V~~~~r 44 (263)
T 3ak4_A 10 LSGRKAIVTG----GSK--GIGAAIARALDKAGATVAIADL 44 (263)
T ss_dssp CTTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEeC----CCC--hHHHHHHHHHHHCCCEEEEEeC
Confidence 5788776653 222 2556889999999999887763
No 450
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=27.94 E-value=1.5e+02 Score=24.27 Aligned_cols=59 Identities=20% Similarity=0.138 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeeh--hchhHHHh--hhccCEEEEech
Q 022363 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISA--KGQETINT--ALKADLIVLNTA 159 (298)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~-rgI~v~~~--k~~~~i~~--A~~aDLVIaNT~ 159 (298)
+=..+|+.|.+.|++|.++-.. + + ..+++.+ .|+.++.. .....+.. ..++|.||+.|-
T Consensus 11 ~G~~la~~L~~~g~~v~vid~~-~----~----~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 11 TAYYLARSMLSRKYGVVIINKD-R----E----LCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp HHHHHHHHHHHTTCCEEEEESC-H----H----HHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred HHHHHHHHHHhCCCeEEEEECC-H----H----HHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 4457889999999999988732 1 1 1234433 47777643 33334443 458999998764
No 451
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=27.89 E-value=48 Score=27.69 Aligned_cols=55 Identities=13% Similarity=-0.003 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhccCEEEEe
Q 022363 91 LLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLIVLN 157 (298)
Q Consensus 91 LlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~aDLVIaN 157 (298)
+=+..-...|++.|++|.+...++|+ +. -..|+++..+.....++ ..+||.||+=
T Consensus 22 ~E~~~p~~~l~~ag~~V~~~s~~~~~----v~-------~~~G~~v~~d~~l~~v~-~~~yD~liiP 76 (177)
T 4hcj_A 22 EEYFESKKIFESAGYKTKVSSTFIGT----AQ-------GKLGGMTNIDLLFSEVD-AVEFDAVVFV 76 (177)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSEE----EE-------ETTSCEEEECEEGGGCC-GGGCSEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCe----Ee-------eCCCCEEecCccHHHCC-HhHCCEEEEC
Confidence 45555668899999999999866542 21 13588888876555554 5789998873
No 452
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=27.87 E-value=93 Score=24.88 Aligned_cols=39 Identities=26% Similarity=0.238 Sum_probs=30.4
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (298)
++--+++||+ +|-.--+.++++.+|+.|..+..+++..+
T Consensus 79 ~~d~vI~iS~----sG~t~~~~~~~~~ak~~g~~vi~IT~~~~ 117 (186)
T 1m3s_A 79 EGDLVIIGSG----SGETKSLIHTAAKAKSLHGIVAALTINPE 117 (186)
T ss_dssp TTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEEcC----CCCcHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 3455677776 45556788999999999999999997654
No 453
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=27.75 E-value=2.7e+02 Score=23.60 Aligned_cols=67 Identities=10% Similarity=0.110 Sum_probs=38.7
Q ss_pred HHHHHHHHHhCCCeEEEEeccC-CCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-hhhccCEEEEechh
Q 022363 93 LMELAFLLRGVGTKVNWITIQK-PSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TALKADLIVLNTAV 160 (298)
Q Consensus 93 LleLA~~Lkq~G~~V~vL~~~~-G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~-~A~~aDLVIaNT~v 160 (298)
=-++++.|.+.|++|.++.... .....+-. ...+.+...|+.++.. ....++. ...++|.||.|+..
T Consensus 17 G~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~~a~~ 87 (321)
T 3c1o_A 17 GKFMVRASLSFSHPTFIYARPLTPDSTPSSV-QLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVISALPF 87 (321)
T ss_dssp HHHHHHHHHHTTCCEEEEECCCCTTCCHHHH-HHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred HHHHHHHHHhCCCcEEEEECCcccccChHHH-HHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEECCCc
Confidence 3467788888899999888543 11001110 1112344567777632 2334454 45689999988753
No 454
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=27.65 E-value=1.9e+02 Score=24.80 Aligned_cols=31 Identities=19% Similarity=0.353 Sum_probs=19.3
Q ss_pred hhccCEEEEechhc---hHHHHHHhhccCCCCCCceEEE
Q 022363 148 ALKADLIVLNTAVA---GKWLDAVLKEDVPRVLPNVLWW 183 (298)
Q Consensus 148 A~~aDLVIaNT~v~---g~wl~~l~~~~~p~~~~pVIWW 183 (298)
..++|.||++..-. ...++.+.+..+ |||.+
T Consensus 58 ~~~vdgiii~~~~~~~~~~~~~~a~~~gi-----pvV~~ 91 (316)
T 1tjy_A 58 NQGYDAIIVSAVSPDGLCPALKRAMQRGV-----KILTW 91 (316)
T ss_dssp HTTCSEEEECCSSSSTTHHHHHHHHHTTC-----EEEEE
T ss_pred HcCCCEEEEeCCCHHHHHHHHHHHHHCcC-----EEEEe
Confidence 46788888776532 345666654455 67665
No 455
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=27.65 E-value=1.1e+02 Score=28.07 Aligned_cols=66 Identities=15% Similarity=0.138 Sum_probs=40.6
Q ss_pred ccEEEEEeccC--CCCCchH-HHHHHHHHHHhCCCe-----EEEEeccCC------CCchhhhhhhHHHHHHcCCceeeh
Q 022363 74 SKLVLLVSHEL--SLSGGPL-LLMELAFLLRGVGTK-----VNWITIQKP------SEEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 74 ~KkILLISHEL--S~TGAPL-lLleLA~~Lkq~G~~-----V~vL~~~~G------~~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
++++++|.=-. +..|+|+ +.++++..|++.|.. |.++....- +..++....+++.+.++||++...
T Consensus 149 ~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~~~~~ 228 (437)
T 3sx6_A 149 EPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTN 228 (437)
T ss_dssp SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCEEECS
T ss_pred CCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCEEEcC
Confidence 56667775321 2334444 234566999999975 888874321 111345556778888889998865
No 456
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=27.60 E-value=1.9e+02 Score=24.21 Aligned_cols=36 Identities=17% Similarity=0.082 Sum_probs=24.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
|+||++|+.. -+| =+=.++++.|.+.|++|.++..+
T Consensus 4 l~~k~vlVTG----as~--gIG~~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 4 FAGKGVLVTG----GAR--GIGRAIAQAFAREGALVALCDLR 39 (256)
T ss_dssp TTTCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEeC----CCC--HHHHHHHHHHHHCCCEEEEEeCC
Confidence 5677666542 222 25568899999999998877643
No 457
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=27.57 E-value=1.1e+02 Score=23.71 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=23.4
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
|.|+++|.=.+..+.|-.+.+.++.+++.|+.++.+.
T Consensus 105 ~~iiliTDG~~~~~~~~~~~~~~~~~~~~~i~i~~ig 141 (182)
T 1shu_X 105 SIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVG 141 (182)
T ss_dssp EEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred eEEEEECCCCcCCCCchhHHHHHHHHHhCCCEEEEEe
Confidence 5566666555444445555667777777777777666
No 458
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=27.48 E-value=62 Score=28.04 Aligned_cols=35 Identities=23% Similarity=0.167 Sum_probs=28.0
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEE
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVN 108 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~ 108 (298)
-++||+||+| .|.=.||+ -|..+++.|++.|...+
T Consensus 113 ~~~gk~VliV-DDii~TG~--Tl~~~~~~l~~~g~~~v 147 (204)
T 3hvu_A 113 SVEGRDILIV-EDIIDSGL--TLSYLVDLFKYRKAKSV 147 (204)
T ss_dssp CCTTCEEEEE-EEEESSCH--HHHHHHHHHHHTTCSEE
T ss_pred cCCCCEEEEE-eceeCchH--HHHHHHHHHHHcCCCEE
Confidence 3689999888 67778888 56788999999998743
No 459
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=27.39 E-value=70 Score=26.01 Aligned_cols=39 Identities=15% Similarity=0.089 Sum_probs=30.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCC
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKP 115 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G 115 (298)
++.-+++||+ +|-.--+.++++..|+.|..+..+++..+
T Consensus 113 ~~DvvI~iS~----SG~t~~~i~~~~~ak~~g~~vI~IT~~~~ 151 (199)
T 1x92_A 113 PGDVLLAIST----SGNSANVIQAIQAAHDREMLVVALTGRDG 151 (199)
T ss_dssp TTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 3445666665 67777888999999999999999997654
No 460
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=27.37 E-value=73 Score=22.36 Aligned_cols=32 Identities=31% Similarity=0.322 Sum_probs=22.1
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEE
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNW 109 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~v 109 (298)
|.+++||+|..| |...-.+...|.+.|++|..
T Consensus 3 mm~~~ilivdd~------~~~~~~l~~~L~~~g~~v~~ 34 (127)
T 2gkg_A 3 HMSKKILIVESD------TALSATLRSALEGRGFTVDE 34 (127)
T ss_dssp ---CEEEEECSC------HHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCeEEEEeCC------HHHHHHHHHHHHhcCceEEE
Confidence 344678888776 66677778888888887753
No 461
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=27.34 E-value=2.9e+02 Score=23.63 Aligned_cols=78 Identities=18% Similarity=0.207 Sum_probs=43.3
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
|++|++|+.. |+.=+=.++|+.|.+.|++|.++..+ .+ -...+.+++.+.|..+. +-...++++
T Consensus 2 l~~k~~lVTG------as~GIG~aia~~la~~G~~V~~~~r~-~~----~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~ 70 (264)
T 3tfo_A 2 VMDKVILITG------ASGGIGEGIARELGVAGAKILLGARR-QA----RIEAIATEIRDAGGTALAQVLDVTDRHSVAA 70 (264)
T ss_dssp CTTCEEEESS------TTSHHHHHHHHHHHHTTCEEEEEESS-HH----HHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeC------CccHHHHHHHHHHHHCCCEEEEEECC-HH----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence 4566555432 22225568899999999998777533 21 11233455555554433 112222222
Q ss_pred -------hhhccCEEEEechh
Q 022363 147 -------TALKADLIVLNTAV 160 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v 160 (298)
.....|.+|.|..+
T Consensus 71 ~~~~~~~~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 71 FAQAAVDTWGRIDVLVNNAGV 91 (264)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 23479999988764
No 462
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=27.23 E-value=2.6e+02 Score=22.93 Aligned_cols=39 Identities=15% Similarity=0.010 Sum_probs=24.5
Q ss_pred cccEEEEEecc--CCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 73 KSKLVLLVSHE--LSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 73 ~~KkILLISHE--LS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
++++|-+|..+ .+..--.-++-.+...+++.|+++.+..
T Consensus 18 ~~~~Ig~i~~~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~ 58 (296)
T 3brq_A 18 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLAD 58 (296)
T ss_dssp -CCEEEEEECGGGCC--CHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCceEEEEeCCcccCCchHHHHHHHHHHHHHHCCCEEEEEe
Confidence 45678788776 5544334455566677888898877654
No 463
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=27.14 E-value=42 Score=29.40 Aligned_cols=70 Identities=20% Similarity=0.246 Sum_probs=36.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHc-CCceeehhchhHHHhhhc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDR-GVQVISAKGQETINTALK 150 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~r-gI~v~~~k~~~~i~~A~~ 150 (298)
.+||+|++|+ ++..|. .++..|.+.|.+|.+ .++..+ . .+++.+. |+.+..+. . +.+.+
T Consensus 127 ~~~~~v~iiG--aG~~g~-----aia~~L~~~g~~V~v-~~r~~~-------~-~~~l~~~~g~~~~~~~-~---~~~~~ 186 (275)
T 2hk9_A 127 VKEKSILVLG--AGGASR-----AVIYALVKEGAKVFL-WNRTKE-------K-AIKLAQKFPLEVVNSP-E---EVIDK 186 (275)
T ss_dssp GGGSEEEEEC--CSHHHH-----HHHHHHHHHTCEEEE-ECSSHH-------H-HHHHTTTSCEEECSCG-G---GTGGG
T ss_pred cCCCEEEEEC--chHHHH-----HHHHHHHHcCCEEEE-EECCHH-------H-HHHHHHHcCCeeehhH-H---hhhcC
Confidence 4678888886 333343 345666667875443 333320 0 1233222 54433211 1 13568
Q ss_pred cCEEEEechhc
Q 022363 151 ADLIVLNTAVA 161 (298)
Q Consensus 151 aDLVIaNT~v~ 161 (298)
+|+||..|-..
T Consensus 187 aDiVi~atp~~ 197 (275)
T 2hk9_A 187 VQVIVNTTSVG 197 (275)
T ss_dssp CSEEEECSSTT
T ss_pred CCEEEEeCCCC
Confidence 99999888753
No 464
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=27.13 E-value=2.7e+02 Score=23.60 Aligned_cols=68 Identities=13% Similarity=0.043 Sum_probs=40.5
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH-hhhc
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN-TALK 150 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~-~A~~ 150 (298)
+|+||++ +-|| .+=-++++.|.+.|++|..+....+. .+ ++ ++.++.. . ..++. ...+
T Consensus 2 ~~~vlVt----GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~-~~-~~~~~~~Dl~-~~~~~~~~~~ 62 (311)
T 3m2p_A 2 SLKIAVT----GGTG--FLGQYVVESIKNDGNTPIILTRSIGN----------KA-IN-DYEYRVSDYT-LEDLINQLND 62 (311)
T ss_dssp CCEEEEE----TTTS--HHHHHHHHHHHHTTCEEEEEESCCC-----------------CCEEEECCCC-HHHHHHHTTT
T ss_pred CCEEEEE----CCCc--HHHHHHHHHHHhCCCEEEEEeCCCCc----------cc-CC-ceEEEEcccc-HHHHHHhhcC
Confidence 3566654 2233 25567889999999999999865221 11 11 5555522 3 44444 4568
Q ss_pred cCEEEEechh
Q 022363 151 ADLIVLNTAV 160 (298)
Q Consensus 151 aDLVIaNT~v 160 (298)
+|.||-+...
T Consensus 63 ~d~Vih~a~~ 72 (311)
T 3m2p_A 63 VDAVVHLAAT 72 (311)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEEcccc
Confidence 9999877654
No 465
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=27.08 E-value=1.6e+02 Score=25.75 Aligned_cols=81 Identities=22% Similarity=0.265 Sum_probs=47.7
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHh-CCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhc---------hhH
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKG---------QET 144 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq-~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~---------~~~ 144 (298)
|-++|+|.. | -.|-.|....++ .+++|+.+.++.+. +-.+...+.|||++.-.. .++
T Consensus 14 ri~vl~SG~----g--snl~all~~~~~~~~~eI~~Vis~~~a-------~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~ 80 (215)
T 3da8_A 14 RLVVLASGT----G--SLLRSLLDAAVGDYPARVVAVGVDREC-------RAAEIAAEASVPVFTVRLADHPSRDAWDVA 80 (215)
T ss_dssp EEEEEESSC----C--HHHHHHHHHSSTTCSEEEEEEEESSCC-------HHHHHHHHTTCCEEECCGGGSSSHHHHHHH
T ss_pred EEEEEEeCC----h--HHHHHHHHHHhccCCCeEEEEEeCCch-------HHHHHHHHcCCCEEEeCcccccchhhhhHH
Confidence 566777753 3 356666666544 34588777766541 335677888999985421 122
Q ss_pred H-H--hhhccCEEEEec---hhchHHHHHH
Q 022363 145 I-N--TALKADLIVLNT---AVAGKWLDAV 168 (298)
Q Consensus 145 i-~--~A~~aDLVIaNT---~v~g~wl~~l 168 (298)
+ + ...++|+|++-. +.....++.+
T Consensus 81 ~~~~l~~~~~Dlivlagy~~iL~~~~l~~~ 110 (215)
T 3da8_A 81 ITAATAAHEPDLVVSAGFMRILGPQFLSRF 110 (215)
T ss_dssp HHHHHHTTCCSEEEEEECCSCCCHHHHHHH
T ss_pred HHHHHHhhCCCEEEEcCchhhCCHHHHhhc
Confidence 2 2 355899998743 3444455543
No 466
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=26.90 E-value=91 Score=27.63 Aligned_cols=79 Identities=14% Similarity=0.103 Sum_probs=45.1
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCC-CeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh--hchhHHH
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVG-TKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA--KGQETIN 146 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G-~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~--k~~~~i~ 146 (298)
..+++|+||++ +-|| -+=-++++.|.+.| ++|.++....... .+ .+. ...++.++.. .....+.
T Consensus 28 ~~~~~~~ilVt----GatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~---~l~---~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 28 SKLANTNVMVV----GGAG--FVGSNLVKRLLELGVNQVHVVDNLLSAE-KI---NVP---DHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGGTTCEEEEE----TTTS--HHHHHHHHHHHHTTCSEEEEECCCTTCC-GG---GSC---CCTTEEEECSCTTCHHHHH
T ss_pred HHhCCCEEEEE----CCcc--HHHHHHHHHHHHcCCceEEEEECCCCCc-hh---hcc---CCCceEEEECCCCCHHHHH
Confidence 34678887765 2333 35678889999999 9999887433211 00 010 0123443321 2233444
Q ss_pred -hhhccCEEEEechhc
Q 022363 147 -TALKADLIVLNTAVA 161 (298)
Q Consensus 147 -~A~~aDLVIaNT~v~ 161 (298)
...++|.||-+....
T Consensus 95 ~~~~~~d~Vih~A~~~ 110 (377)
T 2q1s_A 95 SLQDEYDYVFHLATYH 110 (377)
T ss_dssp HCCSCCSEEEECCCCS
T ss_pred HHhhCCCEEEECCCcc
Confidence 345899999887654
No 467
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=26.63 E-value=1.2e+02 Score=28.54 Aligned_cols=88 Identities=23% Similarity=0.240 Sum_probs=55.0
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHh----CCCeEEEEeccCCC----CchhhhhhhHHHHHHcCCceeehhchhH-
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRG----VGTKVNWITIQKPS----EEDEVIYSLEHKMWDRGVQVISAKGQET- 144 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq----~G~~V~vL~~~~G~----~~g~v~~~L~~kll~rgI~v~~~k~~~~- 144 (298)
+|+|++| |+-..-+|+|..|.+ .|.+|.++...... ...++...+.+.+.++||.+........
T Consensus 180 ~~~vvVi-------GgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i 252 (493)
T 1m6i_A 180 VKSITII-------GGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSV 252 (493)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEE
T ss_pred CCeEEEE-------CCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEE
Confidence 7888888 555567899988876 58889888643211 1234555667778888998875522111
Q ss_pred --------HH----hhhccCEEEEechhch--HHHHHH
Q 022363 145 --------IN----TALKADLIVLNTAVAG--KWLDAV 168 (298)
Q Consensus 145 --------i~----~A~~aDLVIaNT~v~g--~wl~~l 168 (298)
+. ....+|+||..+-+.. .+++..
T Consensus 253 ~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~ 290 (493)
T 1m6i_A 253 GVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTG 290 (493)
T ss_dssp EEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHH
T ss_pred EecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHc
Confidence 11 1236899998665432 345443
No 468
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=26.61 E-value=1.4e+02 Score=25.04 Aligned_cols=35 Identities=31% Similarity=0.440 Sum_probs=28.5
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
.++|++++| |+-..-+|+|..|.+.|.+|.++...
T Consensus 150 ~~~~~vvVi-------GgG~ig~e~A~~l~~~G~~Vt~v~~~ 184 (314)
T 4a5l_A 150 FRNKVLMVV-------GGGDAAMEEALHLTKYGSKVIILHRR 184 (314)
T ss_dssp GTTSEEEEE-------CSSHHHHHHHHHHTTTSSEEEEECSS
T ss_pred cCCCeEEEE-------CCChHHHHHHHHHHHhCCeeeeeccc
Confidence 467888888 44456889999999999999999744
No 469
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=26.52 E-value=1.3e+02 Score=27.12 Aligned_cols=76 Identities=12% Similarity=0.085 Sum_probs=41.9
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh-hchhHHHhhhccCE
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA-KGQETINTALKADL 153 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~-k~~~~i~~A~~aDL 153 (298)
++|+++-=--|..|-= +-+|+.|.+.|++|.++.... .. .+...-..+.+.+.|+++..+ .....+ ....+|+
T Consensus 80 ~~VlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~~~-~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~-l~~~~dl 153 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDG---LVCARHLKLFGYQPTIYYPKR-PN-KPLFTGLVTQCQKMDIPFLGEMPPEPMM-VDELYEL 153 (265)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCSC-CS-SHHHHHHHHHHHHTTCCBCSSCCSSHHH-HHHHCSE
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEeCC-CC-CHHHHHHHHHHHHcCCcEEecccchhhh-ccCCCcE
Confidence 3565554344444442 567999999999999876432 21 222233445566668876521 111111 1136788
Q ss_pred EEE
Q 022363 154 IVL 156 (298)
Q Consensus 154 VIa 156 (298)
||=
T Consensus 154 IID 156 (265)
T 2o8n_A 154 VVD 156 (265)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 470
>2lci_A Protein OR36; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=26.51 E-value=1.3e+02 Score=24.57 Aligned_cols=57 Identities=25% Similarity=0.369 Sum_probs=36.5
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK 140 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k 140 (298)
.+||+||.|- -+|-|+..+.-..|+.|.+++-... ++++ .-...++...|..|-...
T Consensus 52 ekiliisndk------qllkemlelisklgykvflllqdqd--enel-eefkrkiesqgyevrkvt 108 (134)
T 2lci_A 52 EKILIISNDK------QLLKEMLELISKLGYKVFLLLQDQD--ENEL-EEFKRKIESQGYEVRKVT 108 (134)
T ss_dssp CCEEEEESCH------HHHHHHHHHHHHHTCCEEEEEECSC--HHHH-HHHHHHHHTTTCEEEEEC
T ss_pred ceEEEEcCcH------HHHHHHHHHHHHhCceeEEEeecCc--hhHH-HHHHHHHHhCCeeeeecC
Confidence 3699999874 3677777777788999999983332 4454 112233444477776443
No 471
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=26.49 E-value=2.9e+02 Score=23.24 Aligned_cols=38 Identities=11% Similarity=0.051 Sum_probs=26.3
Q ss_pred ccccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 70 SFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 70 ~f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
.-++||++|+.. |+-=+=.++|+.|.+.|++|.++...
T Consensus 9 ~~l~gk~vlVTG------as~gIG~~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 9 GPLTGKVAFITG------AARGQGRAHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp CTTTTCEEEEES------TTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCEEEEEC------CCChHHHHHHHHHHHCCCeEEEEecc
Confidence 346788776642 22235568899999999998887643
No 472
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=26.48 E-value=93 Score=23.21 Aligned_cols=38 Identities=16% Similarity=0.112 Sum_probs=28.4
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
+|.++++.|-...+...-....+++.|.+.|+.|...-
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d 40 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPD 40 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCC
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeC
Confidence 45678888987755443356689999999998887665
No 473
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=26.47 E-value=1.9e+02 Score=26.72 Aligned_cols=77 Identities=5% Similarity=0.134 Sum_probs=47.6
Q ss_pred ccccEEEEEeccC-CCCCchHHHHHHHHHHHhC-CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhh
Q 022363 72 MKSKLVLLVSHEL-SLSGGPLLLMELAFLLRGV-GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTAL 149 (298)
Q Consensus 72 ~~~KkILLISHEL-S~TGAPLlLleLA~~Lkq~-G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~ 149 (298)
.+|++|.+|..=. |+ +.-.++..+... |.+|.+.+-++=....+ +.+++.+.|..+..-...+ ....
T Consensus 149 l~glkva~vGD~~~~r-----va~Sl~~~~~~~~G~~v~~~~P~~~~~~~~----~~~~~~~~g~~~~~~~d~~--eav~ 217 (306)
T 4ekn_B 149 IDGIKIAFVGDLKYGR-----TVHSLVYALSLFENVEMYFVSPKELRLPKD----IIEDLKAKNIKFYEKESLD--DLDD 217 (306)
T ss_dssp STTCEEEEESCTTTCH-----HHHHHHHHHHTSSSCEEEEECCGGGCCCHH----HHHHHHHTTCCEEEESCGG--GCCT
T ss_pred cCCCEEEEEcCCCCCc-----HHHHHHHHHHhcCCCEEEEECCcccccCHH----HHHHHHHcCCEEEEEcCHH--HHhc
Confidence 6899999998422 33 666777788888 99999988322111122 2455566677763211111 1467
Q ss_pred ccCEEEEech
Q 022363 150 KADLIVLNTA 159 (298)
Q Consensus 150 ~aDLVIaNT~ 159 (298)
++|.|+.-.+
T Consensus 218 ~aDvvy~~~~ 227 (306)
T 4ekn_B 218 DIDVLYVTRI 227 (306)
T ss_dssp TCSEEEECCC
T ss_pred CCCEEEeCCc
Confidence 8999998543
No 474
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=26.45 E-value=3.1e+02 Score=23.62 Aligned_cols=85 Identities=14% Similarity=0.170 Sum_probs=46.7
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCC-------chhhhhhhHHHHHHcCCcee----eh
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSE-------EDEVIYSLEHKMWDRGVQVI----SA 139 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~-------~g~v~~~L~~kll~rgI~v~----~~ 139 (298)
-++||.+|+.. -+ .=+=.++|+.|.+.|+.|+++....... ..+-...+.+++...|..+. +-
T Consensus 25 ~l~gk~~lVTG----as--~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 98 (299)
T 3t7c_A 25 KVEGKVAFITG----AA--RGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV 98 (299)
T ss_dssp TTTTCEEEEES----TT--SHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred ccCCCEEEEEC----CC--CHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCC
Confidence 36788766643 22 2255688999999999998876432110 01111223344444454443 11
Q ss_pred hchhHHH--------hhhccCEEEEechhc
Q 022363 140 KGQETIN--------TALKADLIVLNTAVA 161 (298)
Q Consensus 140 k~~~~i~--------~A~~aDLVIaNT~v~ 161 (298)
....+++ .....|.+|.|..+.
T Consensus 99 ~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 99 RDFDAMQAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 2222222 234799999998753
No 475
>2g8l_A 287AA long hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.04A {Pyrococcus horikoshii} SCOP: e.50.1.1
Probab=26.35 E-value=2.9e+02 Score=25.27 Aligned_cols=81 Identities=17% Similarity=0.187 Sum_probs=49.1
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHh-CCCeEEEEeccCCCCchhhhhhhHHHHHHcCC----ceeeh---------
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRG-VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGV----QVISA--------- 139 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq-~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI----~v~~~--------- 139 (298)
.|+|++|..++ |.=++=+=|++.|++ .|.+|++.+..+| .-+++ ..+.+...|. .++..
T Consensus 160 ~~~v~~v~DNa---GEiv~Dl~l~~~Ll~~~g~~V~~~vK~~P-~vnDv---T~~D~~~~~~~~~~~vi~~G~~~~g~~l 232 (299)
T 2g8l_A 160 AENILYITDNV---GEHYFDAILIEKIREISNAEVYIAGKEGP-IINDA---TVEDLKRAGLEKLGKVISTGTRIVGVPL 232 (299)
T ss_dssp CSEEEEECCBT---THHHHHHHHHHHHHHHCCCEEEEEEBSSC-CTTBC---BHHHHHHTTGGGTSEEEECSSSSSSCCT
T ss_pred CCEEEEEecCC---ccHHHhHHHHHHHHHhcCCeEEEEECCcC-ceeeC---CHHHHHHcCcchhhhhhcCCCCCCCCCh
Confidence 57899997665 444444567899999 9999887775544 33333 4555554443 22222
Q ss_pred -hchhHH-HhhhccCEEEEechhc
Q 022363 140 -KGQETI-NTALKADLIVLNTAVA 161 (298)
Q Consensus 140 -k~~~~i-~~A~~aDLVIaNT~v~ 161 (298)
.-...+ +...++||||+=--..
T Consensus 233 ~~~s~el~~~~~~adLVI~KG~~N 256 (299)
T 2g8l_A 233 KLVSREFMEAFNKADVIIAKGQGN 256 (299)
T ss_dssp TTSCHHHHHHHHHCSEEEEEHHHH
T ss_pred HhCCHHHHHHHhcCCEEEEeCCch
Confidence 111122 2567899999876654
No 476
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=26.35 E-value=1.5e+02 Score=27.77 Aligned_cols=64 Identities=19% Similarity=0.237 Sum_probs=39.4
Q ss_pred HHHHHHHHHhCCCeEEEEe-ccC-CC----------------CchhhhhhhHHHHHHcCCceeehhchhHHHhhhccCEE
Q 022363 93 LMELAFLLRGVGTKVNWIT-IQK-PS----------------EEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADLI 154 (298)
Q Consensus 93 LleLA~~Lkq~G~~V~vL~-~~~-G~----------------~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~aDLV 154 (298)
+.+-..+|++.|++.+||. .-. +. ++.+-+.-|.+++-++||.|+.| +|
T Consensus 58 i~~~LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD-------------~V 124 (488)
T 2wc7_A 58 IMEDLDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLD-------------GV 124 (488)
T ss_dssp HHHTHHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEE-------------EC
T ss_pred HHHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEE-------------eC
Confidence 5566789999999999998 111 11 12233445566666778888765 34
Q ss_pred EEechhchHHHHHHh
Q 022363 155 VLNTAVAGKWLDAVL 169 (298)
Q Consensus 155 IaNT~v~g~wl~~l~ 169 (298)
+--|.....|.....
T Consensus 125 ~NH~s~~~~~f~~~~ 139 (488)
T 2wc7_A 125 FNHSSRGFFFFHDVL 139 (488)
T ss_dssp CSBCCSSSHHHHHHH
T ss_pred CCcCCCcCHHHHHHH
Confidence 434555556665543
No 477
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=26.30 E-value=1.5e+02 Score=28.03 Aligned_cols=69 Identities=17% Similarity=0.195 Sum_probs=46.9
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceee--hhchhHHHh--hhc
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVIS--AKGQETINT--ALK 150 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~--~k~~~~i~~--A~~ 150 (298)
.+|++++. ++.| ..+++.|++.|++|+++-... ...+++.+.|++++. ......+.. ..+
T Consensus 5 ~~viIiG~--Gr~G-----~~va~~L~~~g~~vvvId~d~---------~~v~~~~~~g~~vi~GDat~~~~L~~agi~~ 68 (413)
T 3l9w_A 5 MRVIIAGF--GRFG-----QITGRLLLSSGVKMVVLDHDP---------DHIETLRKFGMKVFYGDATRMDLLESAGAAK 68 (413)
T ss_dssp CSEEEECC--SHHH-----HHHHHHHHHTTCCEEEEECCH---------HHHHHHHHTTCCCEESCTTCHHHHHHTTTTT
T ss_pred CeEEEECC--CHHH-----HHHHHHHHHCCCCEEEEECCH---------HHHHHHHhCCCeEEEcCCCCHHHHHhcCCCc
Confidence 45788773 4444 577899999999999987331 123566777999883 344444543 468
Q ss_pred cCEEEEech
Q 022363 151 ADLIVLNTA 159 (298)
Q Consensus 151 aDLVIaNT~ 159 (298)
+|.||+-|-
T Consensus 69 A~~viv~~~ 77 (413)
T 3l9w_A 69 AEVLINAID 77 (413)
T ss_dssp CSEEEECCS
T ss_pred cCEEEECCC
Confidence 999998654
No 478
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=26.30 E-value=86 Score=26.74 Aligned_cols=78 Identities=14% Similarity=0.106 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhCCCeEEEEeccCCC--CchhhhhhhHHHHHHc-CCceeehhchh---HHH--hhhccCEEEEechhc-
Q 022363 91 LLLMELAFLLRGVGTKVNWITIQKPS--EEDEVIYSLEHKMWDR-GVQVISAKGQE---TIN--TALKADLIVLNTAVA- 161 (298)
Q Consensus 91 LlLleLA~~Lkq~G~~V~vL~~~~G~--~~g~v~~~L~~kll~r-gI~v~~~k~~~---~i~--~A~~aDLVIaNT~v~- 161 (298)
+-..++|+.+.+.|++...+....+. ..+. ...+.+++.+. ++|++-.-+.+ .+. ....+|.|+++|...
T Consensus 35 ~~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~-~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~ 113 (247)
T 3tdn_A 35 ILLRDWVVEVEKRGAGEILLTSIDRDGTKSGY-DTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVE 113 (247)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTTTCSSCC-CHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEecCcccCCCcc-cHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhh
Confidence 45689999999999997777643322 1221 12445566654 88998663322 222 234699999999865
Q ss_pred -hHHHHHHh
Q 022363 162 -GKWLDAVL 169 (298)
Q Consensus 162 -g~wl~~l~ 169 (298)
-.|+.++.
T Consensus 114 dp~~~~~~~ 122 (247)
T 3tdn_A 114 NPSLITQIA 122 (247)
T ss_dssp CTHHHHHHH
T ss_pred ChHHHHHHH
Confidence 34455443
No 479
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=26.22 E-value=63 Score=24.80 Aligned_cols=32 Identities=6% Similarity=0.199 Sum_probs=25.7
Q ss_pred CcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEE
Q 022363 239 NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (298)
Q Consensus 239 ~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~ 275 (298)
.+++.-+ ++.++ +-+.+.+.||++++++.|-.
T Consensus 68 ~~~eqk~----~l~~~-i~~~l~~~lgi~~~~v~I~~ 99 (119)
T 2os5_A 68 LSADDNI----RHTQK-ITQFCQDTLKLPKDKVIITY 99 (119)
T ss_dssp CCHHHHH----HHHHH-HHHHHHHHHCCCGGGEEEEE
T ss_pred CCHHHHH----HHHHH-HHHHHHHHhCcCcccEEEEE
Confidence 5666666 77777 88889999999999987753
No 480
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=26.22 E-value=3.1e+02 Score=23.47 Aligned_cols=40 Identities=3% Similarity=-0.132 Sum_probs=25.6
Q ss_pred cccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 73 KSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 73 ~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
++++|-+|..+.+..--.-++-.+...+++.|+++.+...
T Consensus 62 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~ 101 (332)
T 2o20_A 62 RTTTVGVILPTITSTYFAAITRGVDDIASMYKYNMILANS 101 (332)
T ss_dssp CCCEEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEEEEEEC
Confidence 5677888877654322223445556778888998877653
No 481
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=26.21 E-value=1.1e+02 Score=27.57 Aligned_cols=67 Identities=27% Similarity=0.375 Sum_probs=39.5
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHhCCC--eEEEEeccCCCCchhhhhhhHHHHHHcCCc--eeehhchhHHH-hhh
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRGVGT--KVNWITIQKPSEEDEVIYSLEHKMWDRGVQ--VISAKGQETIN-TAL 149 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq~G~--~V~vL~~~~G~~~g~v~~~L~~kll~rgI~--v~~~k~~~~i~-~A~ 149 (298)
++|.+|. ++.-|. .+|..|++.|+ +|.+.- +.+ + -.+++.+.|+. ...+.. + .+.
T Consensus 34 ~kI~IIG--~G~mG~-----slA~~l~~~G~~~~V~~~d-r~~----~----~~~~a~~~G~~~~~~~~~~----~~~~~ 93 (314)
T 3ggo_A 34 QNVLIVG--VGFMGG-----SFAKSLRRSGFKGKIYGYD-INP----E----SISKAVDLGIIDEGTTSIA----KVEDF 93 (314)
T ss_dssp SEEEEES--CSHHHH-----HHHHHHHHTTCCSEEEEEC-SCH----H----HHHHHHHTTSCSEEESCTT----GGGGG
T ss_pred CEEEEEe--eCHHHH-----HHHHHHHhCCCCCEEEEEE-CCH----H----HHHHHHHCCCcchhcCCHH----HHhhc
Confidence 7899997 555555 46778889999 655432 321 1 13455666762 222211 1 356
Q ss_pred ccCEEEEechhc
Q 022363 150 KADLIVLNTAVA 161 (298)
Q Consensus 150 ~aDLVIaNT~v~ 161 (298)
++|+||..+-..
T Consensus 94 ~aDvVilavp~~ 105 (314)
T 3ggo_A 94 SPDFVMLSSPVR 105 (314)
T ss_dssp CCSEEEECSCGG
T ss_pred cCCEEEEeCCHH
Confidence 788888876543
No 482
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=26.21 E-value=96 Score=29.52 Aligned_cols=58 Identities=26% Similarity=0.337 Sum_probs=40.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHH-cCCceeeh
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWD-RGVQVISA 139 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~-rgI~v~~~ 139 (298)
.++|+|++| |+-..-+|+|..|.+.|.+|.++.....-..+ ..+.+++.+ .||.+...
T Consensus 353 ~~~k~V~Vi-------GgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~~---~~l~~~l~~~~gV~v~~~ 411 (521)
T 1hyu_A 353 FKGKRVAVI-------GGGNSGVEAAIDLAGIVEHVTLLEFAPEMKAD---QVLQDKVRSLKNVDIILN 411 (521)
T ss_dssp GBTSEEEEE-------CCSHHHHHHHHHHHHHBSEEEEECSSSSCCSC---HHHHHHHTTCTTEEEECS
T ss_pred cCCCeEEEE-------CCCHHHHHHHHHHHhhCCEEEEEEeCcccCcC---HHHHHHHhcCCCcEEEeC
Confidence 468899988 44456789999999999999998743221112 235667766 48887654
No 483
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=26.19 E-value=2.5e+02 Score=23.71 Aligned_cols=38 Identities=16% Similarity=0.144 Sum_probs=25.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
|+||++|+..=-. +| =+=.++|+.|.+.|++|.++...
T Consensus 4 l~~k~vlVTGas~--~~--gIG~~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 4 LKGKKGLIVGVAN--NK--SIAYGIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp TTTCEEEEECCCS--TT--SHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEECCCC--CC--cHHHHHHHHHHHCCCEEEEEeCC
Confidence 5778766643110 02 25568999999999998877643
No 484
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=26.18 E-value=1.6e+02 Score=26.38 Aligned_cols=34 Identities=15% Similarity=0.071 Sum_probs=25.0
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
|+.|+||+++-- ++ -+.+++.+++.|++++++..
T Consensus 5 ~~~~~ilI~g~g------~~-~~~~~~a~~~~G~~~v~v~~ 38 (403)
T 4dim_A 5 YDNKRLLILGAG------RG-QLGLYKAAKELGIHTIAGTM 38 (403)
T ss_dssp -CCCEEEEECCC------GG-GHHHHHHHHHHTCEEEEEEC
T ss_pred cCCCEEEEECCc------Hh-HHHHHHHHHHCCCEEEEEcC
Confidence 678999998432 22 35688899999999999963
No 485
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=26.04 E-value=2.9e+02 Score=23.10 Aligned_cols=22 Identities=14% Similarity=0.111 Sum_probs=13.3
Q ss_pred HHHHHHHHHHhCCCeEEEEecc
Q 022363 92 LLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~ 113 (298)
++-.+...+++.|+++.+....
T Consensus 28 ~~~gi~~~a~~~g~~~~~~~~~ 49 (294)
T 3qk7_A 28 MISWIGIELGKRGLDLLLIPDE 49 (294)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEeCC
Confidence 3444556667777777666543
No 486
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=25.99 E-value=46 Score=28.83 Aligned_cols=34 Identities=15% Similarity=0.103 Sum_probs=16.4
Q ss_pred ccEEEEEeccCCCCCchHH---HHHHHHHHHhCCCeEEEEe
Q 022363 74 SKLVLLVSHELSLSGGPLL---LMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLl---LleLA~~Lkq~G~~V~vL~ 111 (298)
||+|.++| -+|-|.+ ..+++..+++.|++|.++.
T Consensus 83 G~~Va~ls----~~GdP~i~~~g~~l~~~l~~~gi~vevIP 119 (242)
T 1wyz_A 83 GASMGVIS----EAGCPAVADPGADVVAIAQRQKLKVIPLV 119 (242)
T ss_dssp TCCEEEEC----C-------CHHHHHHHHHHHTTCCEEECC
T ss_pred CCEEEEEe----cCCCCcccCcHHHHHHHHHHCCCCEEEeC
Confidence 56666665 2343433 2455566666666666665
No 487
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=25.95 E-value=92 Score=26.53 Aligned_cols=36 Identities=28% Similarity=0.164 Sum_probs=24.8
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
|++|+||+.. -|| -+=.++++.|.+.|++|.++...
T Consensus 1 m~~~~vlVtG----atG--~iG~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALITG----IRG--QDGAYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp --CCEEEEET----TTS--HHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEEC----CCC--hHHHHHHHHHHHCCCEEEEEECC
Confidence 5678777652 233 36678899999999999888744
No 488
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=25.95 E-value=73 Score=26.63 Aligned_cols=34 Identities=29% Similarity=0.244 Sum_probs=27.3
Q ss_pred cccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeE
Q 022363 71 FMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKV 107 (298)
Q Consensus 71 f~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V 107 (298)
-++||+||+| .|.-.||+ -|.++++.|++.|...
T Consensus 88 ~~~gk~vliV-DDii~TG~--Tl~~~~~~l~~~g~~~ 121 (177)
T 3ohp_A 88 DIKGKDVLLV-EDIIDTGN--TLNKVKEILALREPKS 121 (177)
T ss_dssp CCTTSEEEEE-EEEESSCH--HHHHHHHHHHTTCCSE
T ss_pred ccCCCEEEEE-eeEeCcHH--HHHHHHHHHHhcCCcE
Confidence 3689998777 67778888 5778999999999763
No 489
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=25.94 E-value=1.4e+02 Score=25.47 Aligned_cols=66 Identities=21% Similarity=0.212 Sum_probs=39.5
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehhchhHHHhhhccCE
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAKGQETINTALKADL 153 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k~~~~i~~A~~aDL 153 (298)
.++|.+|. ++.-|.. ++..|.+.|++|.+.. +.+ .-.+++.+.|+.+..+. . +.+.++|+
T Consensus 4 ~~~i~iiG--~G~~G~~-----~a~~l~~~g~~V~~~~-~~~--------~~~~~~~~~g~~~~~~~-~---~~~~~~D~ 63 (301)
T 3cky_A 4 SIKIGFIG--LGAMGKP-----MAINLLKEGVTVYAFD-LME--------ANVAAVVAQGAQACENN-Q---KVAAASDI 63 (301)
T ss_dssp CCEEEEEC--CCTTHHH-----HHHHHHHTTCEEEEEC-SSH--------HHHHHHHTTTCEECSSH-H---HHHHHCSE
T ss_pred CCEEEEEC--ccHHHHH-----HHHHHHHCCCeEEEEe-CCH--------HHHHHHHHCCCeecCCH-H---HHHhCCCE
Confidence 35788887 5555654 4667778899976543 322 11345555677654331 1 13457899
Q ss_pred EEEech
Q 022363 154 IVLNTA 159 (298)
Q Consensus 154 VIaNT~ 159 (298)
||..+-
T Consensus 64 vi~~vp 69 (301)
T 3cky_A 64 IFTSLP 69 (301)
T ss_dssp EEECCS
T ss_pred EEEECC
Confidence 998774
No 490
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=25.84 E-value=2.9e+02 Score=23.00 Aligned_cols=78 Identities=18% Similarity=0.271 Sum_probs=43.9
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHH-
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETIN- 146 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~- 146 (298)
++||++|+.. -+|+ +=.++|+.|.+.|++|.++..+ . .. ...+.+++...|..+. +-...++++
T Consensus 5 l~~k~~lVTG----as~g--IG~aia~~l~~~G~~V~~~~r~-~---~~-~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~ 73 (247)
T 2jah_A 5 LQGKVALITG----ASSG--IGEATARALAAEGAAVAIAARR-V---EK-LRALGDELTAAGAKVHVLELDVADRQGVDA 73 (247)
T ss_dssp TTTCEEEEES----CSSH--HHHHHHHHHHHTTCEEEEEESC-H---HH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEC----CCCH--HHHHHHHHHHHCCCEEEEEECC-H---HH-HHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 6778766653 2222 5568899999999998877633 1 11 1223445544443332 112222222
Q ss_pred -------hhhccCEEEEechh
Q 022363 147 -------TALKADLIVLNTAV 160 (298)
Q Consensus 147 -------~A~~aDLVIaNT~v 160 (298)
.....|.+|.|..+
T Consensus 74 ~~~~~~~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 74 AVASTVEALGGLDILVNNAGI 94 (247)
T ss_dssp HHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 23479999998765
No 491
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=25.68 E-value=1.2e+02 Score=20.68 Aligned_cols=30 Identities=27% Similarity=0.388 Sum_probs=21.7
Q ss_pred ccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEE
Q 022363 74 SKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNW 109 (298)
Q Consensus 74 ~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~v 109 (298)
+++||+|..+ |...-.+...|.+.|++|..
T Consensus 1 ~~~iliv~~~------~~~~~~l~~~l~~~g~~v~~ 30 (119)
T 2j48_A 1 AGHILLLEEE------DEAATVVCEMLTAAGFKVIW 30 (119)
T ss_dssp CCEEEEECCC------HHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEeCC------HHHHHHHHHHHHhCCcEEEE
Confidence 4578888766 56667777888888887654
No 492
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=25.62 E-value=3.1e+02 Score=24.96 Aligned_cols=69 Identities=19% Similarity=0.259 Sum_probs=41.0
Q ss_pred cEEEEEeccCCCCCchHHHHHHHHHHHh--CCCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeeh------h--chhH
Q 022363 75 KLVLLVSHELSLSGGPLLLMELAFLLRG--VGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISA------K--GQET 144 (298)
Q Consensus 75 KkILLISHELS~TGAPLlLleLA~~Lkq--~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~------k--~~~~ 144 (298)
|-++|+|.. |- -|-.|...-++ .+.++.++.+++++ ......+.|||++.- + +..+
T Consensus 97 ri~vl~Sg~----g~--~l~~ll~~~~~g~l~~~i~~Visn~~~--------~~~~A~~~gIp~~~~~~~~~~r~~~~~~ 162 (292)
T 3lou_A 97 KVLIMVSKL----EH--CLADLLFRWKMGELKMDIVGIVSNHPD--------FAPLAAQHGLPFRHFPITADTKAQQEAQ 162 (292)
T ss_dssp EEEEEECSC----CH--HHHHHHHHHHHTSSCCEEEEEEESSST--------THHHHHHTTCCEEECCCCSSCHHHHHHH
T ss_pred EEEEEEcCC----Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHH--------HHHHHHHcCCCEEEeCCCcCCHHHHHHH
Confidence 567888876 32 34455544444 24688887766653 234466779999841 1 1222
Q ss_pred H-H--hhhccCEEEEe
Q 022363 145 I-N--TALKADLIVLN 157 (298)
Q Consensus 145 i-~--~A~~aDLVIaN 157 (298)
+ + ...++|+|++-
T Consensus 163 ~~~~l~~~~~Dlivla 178 (292)
T 3lou_A 163 WLDVFETSGAELVILA 178 (292)
T ss_dssp HHHHHHHHTCSEEEES
T ss_pred HHHHHHHhCCCEEEec
Confidence 2 2 24589999873
No 493
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=25.58 E-value=1e+02 Score=25.12 Aligned_cols=66 Identities=17% Similarity=0.157 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhCCCeEEEEeccCCCCchhhhhhhHHHHHHcCCcee----ehhchhHHHh--------hhccCEEEEech
Q 022363 92 LLMELAFLLRGVGTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVI----SAKGQETINT--------ALKADLIVLNTA 159 (298)
Q Consensus 92 lLleLA~~Lkq~G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~----~~k~~~~i~~--------A~~aDLVIaNT~ 159 (298)
+=.++++.|.+.|++|.++..+..+ -...+.+++.+.+..+. +-...++++. ...+|.||.|..
T Consensus 13 iG~~la~~l~~~G~~v~~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag 88 (244)
T 1edo_A 13 IGKAIALSLGKAGCKVLVNYARSAK----AAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAG 88 (244)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCC
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5578999999999999887645421 11123344444343322 1122333331 237899999976
Q ss_pred hc
Q 022363 160 VA 161 (298)
Q Consensus 160 v~ 161 (298)
+.
T Consensus 89 ~~ 90 (244)
T 1edo_A 89 IT 90 (244)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 494
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=25.52 E-value=1.8e+02 Score=24.56 Aligned_cols=35 Identities=14% Similarity=0.074 Sum_probs=24.7
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
++||++|+.. |+.=+=.++|+.|.+.|++|.++..
T Consensus 6 l~gk~~lVTG------as~gIG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 6 YQGKKAIVIG------GTHGMGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp TTTCEEEEET------CSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC------CCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4678766653 2223556899999999999887763
No 495
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=25.46 E-value=2.3e+02 Score=24.29 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=24.3
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEec
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITI 112 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~ 112 (298)
++||.+|+.. |+.=+=.++|+.|.+.|+.|.++..
T Consensus 25 l~~k~vlVTG------as~GIG~aia~~l~~~G~~V~~~~r 59 (277)
T 4dqx_A 25 LNQRVCIVTG------GGSGIGRATAELFAKNGAYVVVADV 59 (277)
T ss_dssp TTTCEEEEET------TTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC------CCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 5677666543 2223556889999999999887763
No 496
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=25.42 E-value=56 Score=24.72 Aligned_cols=32 Identities=9% Similarity=0.168 Sum_probs=25.1
Q ss_pred CcHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCEEEEE
Q 022363 239 NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 275 (298)
Q Consensus 239 ~s~~L~~~a~~~va~~~lre~VR~~lGl~~ddvlv~~ 275 (298)
.+++.-+ ++.++ +-+.+.+.+|++++++.|-.
T Consensus 68 ~~~eqk~----~l~~~-i~~~l~~~lgi~~~~v~I~~ 99 (112)
T 3b64_A 68 YGPSEPE----KVTSI-VTAAITKECGIVADRIFVLY 99 (112)
T ss_dssp CCTTHHH----HHHHH-HHHHHHHHHCCCGGGEEEEE
T ss_pred CCHHHHH----HHHHH-HHHHHHHHhCcCcceEEEEE
Confidence 4555555 77777 88889999999999988754
No 497
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=25.37 E-value=1.7e+02 Score=28.41 Aligned_cols=47 Identities=19% Similarity=0.406 Sum_probs=32.6
Q ss_pred HHHHHHHHHhCCCeEEEEe--ccCCC----------------CchhhhhhhHHHHHHcCCceeeh
Q 022363 93 LMELAFLLRGVGTKVNWIT--IQKPS----------------EEDEVIYSLEHKMWDRGVQVISA 139 (298)
Q Consensus 93 LleLA~~Lkq~G~~V~vL~--~~~G~----------------~~g~v~~~L~~kll~rgI~v~~~ 139 (298)
+.+-..+|++.|++.++|. -+.+. ++.+-+.-|.+++-++||.|+.|
T Consensus 178 i~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD 242 (588)
T 1j0h_A 178 IIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLD 242 (588)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 4455699999999999998 11111 22344456677777889999876
No 498
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=25.27 E-value=57 Score=32.96 Aligned_cols=102 Identities=16% Similarity=0.077 Sum_probs=57.6
Q ss_pred ccccccc-cEEEEEeccCCCCCchHHHHHHHHHHHhC------CCeEEEEeccCCCCchhhhhhhHHHHHHcCCceeehh
Q 022363 68 PLSFMKS-KLVLLVSHELSLSGGPLLLMELAFLLRGV------GTKVNWITIQKPSEEDEVIYSLEHKMWDRGVQVISAK 140 (298)
Q Consensus 68 ~~~f~~~-KkILLISHELS~TGAPLlLleLA~~Lkq~------G~~V~vL~~~~G~~~g~v~~~L~~kll~rgI~v~~~k 140 (298)
+.+.++| |+|-+|. ++.-|.+ +|.-|++. |.+|.+-..+.+ ...++..+.|+.+....
T Consensus 47 ~~~~L~GiKkIgIIG--lGsMG~A-----mA~nLr~s~~~~g~G~~ViVg~r~~s--------ks~e~A~e~G~~v~d~t 111 (525)
T 3fr7_A 47 LPEAFKGIKQIGVIG--WGSQGPA-----QAQNLRDSLAEAKSDIVVKIGLRKGS--------KSFDEARAAGFTEESGT 111 (525)
T ss_dssp HHHHTTTCSEEEEEC--CTTHHHH-----HHHHHHHHHHHTTCCCEEEEEECTTC--------SCHHHHHHTTCCTTTTC
T ss_pred ChHHhcCCCEEEEEe--EhHHHHH-----HHHHHHhcccccCCCCEEEEEeCCch--------hhHHHHHHCCCEEecCC
Confidence 3478899 9999998 5544554 45566666 887765443322 22456667787652100
Q ss_pred chhHHHhhhccCEEEEechhch--HHHHHHhhccCCCCCCceEEEeeec
Q 022363 141 GQETINTALKADLIVLNTAVAG--KWLDAVLKEDVPRVLPNVLWWIHEM 187 (298)
Q Consensus 141 ~~~~i~~A~~aDLVIaNT~v~g--~wl~~l~~~~~p~~~~pVIWWIHE~ 187 (298)
....-+.+.++|+||.-+=... ..++++. ++.+ ...+|...|=-
T Consensus 112 a~s~aEAa~~ADVVILaVP~~~~~eVl~eI~-p~LK--~GaILs~AaGf 157 (525)
T 3fr7_A 112 LGDIWETVSGSDLVLLLISDAAQADNYEKIF-SHMK--PNSILGLSHGF 157 (525)
T ss_dssp EEEHHHHHHHCSEEEECSCHHHHHHHHHHHH-HHSC--TTCEEEESSSH
T ss_pred CCCHHHHHhcCCEEEECCChHHHHHHHHHHH-HhcC--CCCeEEEeCCC
Confidence 0001225778999999876532 2444433 2221 12577777643
No 499
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=25.23 E-value=3e+02 Score=23.28 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=25.6
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEecc
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWITIQ 113 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~~~ 113 (298)
|++|++|+.. -+| =+=.++++.|.+.|++|.++..+
T Consensus 6 l~~k~vlVTG----as~--gIG~~ia~~l~~~G~~V~~~~r~ 41 (264)
T 2dtx_A 6 LRDKVVIVTG----ASM--GIGRAIAERFVDEGSKVIDLSIH 41 (264)
T ss_dssp GTTCEEEEES----CSS--HHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCEEEEeC----CCC--HHHHHHHHHHHHCCCEEEEEecC
Confidence 5788766543 223 35678899999999998887644
No 500
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=25.22 E-value=2e+02 Score=24.67 Aligned_cols=34 Identities=18% Similarity=0.235 Sum_probs=24.2
Q ss_pred ccccEEEEEeccCCCCCchHHHHHHHHHHHhCCCeEEEEe
Q 022363 72 MKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTKVNWIT 111 (298)
Q Consensus 72 ~~~KkILLISHELS~TGAPLlLleLA~~Lkq~G~~V~vL~ 111 (298)
++||++|+.. |+.=+=.++|+.|.+.|++|.++.
T Consensus 3 l~gk~~lVTG------as~GIG~aia~~la~~G~~V~~~~ 36 (281)
T 3zv4_A 3 LTGEVALITG------GASGLGRALVDRFVAEGARVAVLD 36 (281)
T ss_dssp TTTCEEEEET------CSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCEEEEEC------CCcHHHHHHHHHHHHCcCEEEEEe
Confidence 4677666643 222355788999999999988776
Done!