BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 022370
         (298 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q0U822|MON1_PHANO Vacuolar fusion protein MON1 OS=Phaeosphaeria nodorum (strain SN15
           / ATCC MYA-4574 / FGSC 10173) GN=MON1 PE=3 SV=1
          Length = 722

 Score = 35.0 bits (79), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 24/47 (51%)

Query: 234 VQIMFPVEPPVVCEFDWEFDEVDEFTDKLVEEEALAEDQKDAFKDFV 280
            Q MFP +P     F+ EFDEVDE +     EEA+    +   K F+
Sbjct: 154 AQSMFPPDPQFDAAFNREFDEVDEMSVDGSNEEAVMRQWRAKLKHFL 200


>sp|Q10435|YDE1_SCHPO Probable ubiquitin fusion degradation protein C12B10.01c
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=SPAC12B10.01c PE=3 SV=2
          Length = 1647

 Score = 32.0 bits (71), Expect = 5.2,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 192 LSCTQRRSALRHLKVDRLKKFEYCLPYFYQPFKEDEFEQSTVVQI 236
           +S +Q +SA RH ++  L   +     F   +KE+  E ST+VQ+
Sbjct: 817 ISFSQNKSAARHEELKNLSTLKSLAKEFLSNYKEENLENSTLVQL 861


>sp|A2QCU8|SCONB_ASPNC Probable E3 ubiquitin ligase complex SCF subunit sconB
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=sconB PE=3 SV=1
          Length = 670

 Score = 32.0 bits (71), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 16  AAAKASSSSQENHKEEDEQQKTSKAHRAKRVKASKPETEPEYFEDQ-RNMEDLWKEVFPV 74
           A+  A SS     K E  +++T+   R  +  A +PE   +YF+ + R  ++++K+ F V
Sbjct: 264 ASPVADSSGTGKRKPEPSEEETAVVKRHCQSLAMRPEGSEDYFKTRYRPWKEVYKDRFKV 323

Query: 75  GTEW 78
           GT W
Sbjct: 324 GTNW 327


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.133    0.393 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,735,708
Number of Sequences: 539616
Number of extensions: 4942529
Number of successful extensions: 26748
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 26296
Number of HSP's gapped (non-prelim): 414
length of query: 298
length of database: 191,569,459
effective HSP length: 117
effective length of query: 181
effective length of database: 128,434,387
effective search space: 23246624047
effective search space used: 23246624047
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)