Query 022376
Match_columns 298
No_of_seqs 170 out of 717
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 04:28:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022376.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022376hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 99.9 2.3E-24 7.7E-29 223.7 24.8 239 3-271 338-577 (802)
2 2fy7_A Beta-1,4-galactosyltran 92.1 0.054 1.8E-06 49.1 2.0 53 6-59 201-263 (287)
3 1xhb_A Polypeptide N-acetylgal 54.6 6 0.0002 37.3 2.5 60 6-67 231-301 (472)
4 2d7i_A Polypeptide N-acetylgal 50.7 21 0.00071 34.8 5.8 60 6-67 311-379 (570)
5 2z86_A Chondroitin synthase; G 40.2 13 0.00043 36.4 2.3 34 6-42 303-336 (625)
6 2ffu_A Ppgalnact-2, polypeptid 28.8 34 0.0012 32.3 3.3 60 6-67 263-333 (501)
7 4fix_A UDP-galactofuranosyl tr 23.4 39 0.0013 33.8 2.6 44 6-51 390-438 (657)
8 2nxv_A ATP synthase subunits r 14.3 1.1E+02 0.0037 25.8 3.1 22 6-28 177-198 (249)
9 1qg8_A Protein (spore coat pol 13.9 33 0.0011 28.6 -0.4 47 5-54 187-235 (255)
10 3gyc_A Putative glycoside hydr 12.1 37 0.0013 31.3 -0.7 44 6-52 36-83 (393)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.93 E-value=2.3e-24 Score=223.73 Aligned_cols=239 Identities=16% Similarity=0.227 Sum_probs=174.7
Q ss_pred CcccchHHHhHHHHHHCCCeEEecCCCCCccccccCCChhhhhhHhhhhhhhHHHHHHhhcCccccCCCCCCHhHHHHhh
Q 022376 3 HSLVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYA 82 (298)
Q Consensus 3 gsiTED~~Tg~~~Lh~~Gwrs~Y~~~~l~af~GlaP~~l~~~l~Qr~RWa~G~~qi~~~k~~Pl~~~~~~L~~~Qrl~Y~ 82 (298)
++++||.+++.+ ++++|||+.|+++.... +.+|+|+.++++||.||++|.+|+++. ++|+.. +++++.||++|+
T Consensus 338 ~~~~ED~~l~~r-l~~~G~ri~~~~~~~~~--~~~p~t~~~~~~Qr~RW~~G~~q~l~~-~~pl~~--~~l~~~~rl~~l 411 (802)
T 4hg6_A 338 ETITEDAETALE-IHSRGWKSLYIDRAMIA--GLQPETFASFIQQRGRWATGMMQMLLL-KNPLFR--RGLGIAQRLCYL 411 (802)
T ss_dssp SSSSHHHHHHHH-HHTTTCCEEECCCCCEE--ECCCCSHHHHHHHHHHHHHHHHHHHHH-SCTTSC--SSCCHHHHHHHH
T ss_pred CCcchHHHHHHH-HHHcCCeEEEecCCEEE--ecCCCCHHHHHHHHHHHHccHHHHHHH-hCcccc--CCCCHHHHHHHH
Confidence 568899999999 99999999999876654 999999999999999999999999974 689887 899999999999
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHhCCCcccccCcchhHHHHHHHHHHHHHHHH-HHHHhCCcccccccchhhHHHHHH
Q 022376 83 DLGMFPLLNCLPLWCFATVPQLCLLHGIPLYPEVLSSSSPIFVFVFLSALSKHLY-EVLSTGGSIKIWRNEQRIWMIRAV 161 (298)
Q Consensus 83 ~~~~y~~~~sl~~l~y~l~P~l~ll~g~~~~~~~~~~~~~~~~~~~l~~~~~~~l-~~~~~g~~~~~ww~~q~~~~i~~~ 161 (298)
++..++ +.+++.++++++|++++++|+.++....... +..++++.....+ .....|..-..||. .+..+
T Consensus 412 ~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~----~~~~lp~~l~~~~~~~~~~~~~r~~~~~-----~l~~~ 481 (802)
T 4hg6_A 412 NSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVATFEEV----LAYMPGYLAVSFLVQNALFARQRWPLVS-----EVYEV 481 (802)
T ss_dssp HHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCCHHHH----HHHHHHHHHHHHHHHHHHHTTTSCTTHH-----HHHHH
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcCHHHH----HHHHHHHHHHHHHHHHHHhcCcHHHHHH-----HHHHH
Confidence 999999 9999999999999999999998876422222 2222333222211 11112221112222 22333
Q ss_pred HHHHHHHHHHHHHHhcccccceeEccCCCchhhhhhhcCcceeeccchhhHHHHHHHHHHHHHHHHHHHHhhhcccCCch
Q 022376 162 TCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMGKFDFRTSKMFLAPLVTIILLNIAAFVCGAIRSTIITGDWD 241 (298)
Q Consensus 162 ~~~~~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~~p~~~ll~l~l~al~~g~~~~~~~~~~~~ 241 (298)
...++.+..++..++++++.+|+||+|+++.++. .| +.+..|+.++++++++++++|+++. ...+ .
T Consensus 482 ~~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~~--------~~---~~~~~p~~~~~~l~~~~~~~~~~~~-~~~~--~ 547 (802)
T 4hg6_A 482 AQAPYLARAIVTTLLRPRSARFAVTAKDETLSEN--------YI---SPIYRPLLFTFLLCLSGVLATLVRW-VAFP--G 547 (802)
T ss_dssp HHHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSSC--------CB---CTTCHHHHHHHHHHHHHHHHHHHHH-HHCG--G
T ss_pred HHHHHHHHHHHHHHhCCCCCcceECCCCcccccc--------ch---hhHHHHHHHHHHHHHHHHHHHHHHH-hccC--C
Confidence 3444445555566678899999999999865531 11 2678899999999999999999987 5332 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 022376 242 KMFVQISLSFYILVMNYAIIEGMIVRKDNG 271 (298)
Q Consensus 242 ~~~~~~~~~~w~v~~l~p~~~~l~~r~~~~ 271 (298)
.....+++++|.++|++.+..++....++.
T Consensus 548 ~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~ 577 (802)
T 4hg6_A 548 DRSVLLVVGGWAVLNVLLVGFALRAVAEKQ 577 (802)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHTTTBCCC
T ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHhcCC
Confidence 233456777888888888888876554443
No 2
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=92.11 E-value=0.054 Score=49.11 Aligned_cols=53 Identities=11% Similarity=-0.115 Sum_probs=40.7
Q ss_pred cchHHHhHHHHHHCCCeEEecCCCCCccc----------cccCCChhhhhhHhhhhhhhHHHHH
Q 022376 6 VEDYFTGFKQLHCKGWRSVYLNPERPQFL----------GTSTTNLNDSLVQGTRWSSGLVQVA 59 (298)
Q Consensus 6 TED~~Tg~~~Lh~~Gwrs~Y~~~~l~af~----------GlaP~~l~~~l~Qr~RWa~G~~qi~ 59 (298)
.||..-+.| ++.+||+..+.++....+. -..|+.+....+||.||+++.++.+
T Consensus 201 ~ED~Dl~~R-l~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 201 GEDDDIFNR-LVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp CHHHHHHHH-HHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred cchHHHHHH-HHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcCCCcccC
Confidence 499999999 9999998875443222211 1378999999999999999988755
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=54.58 E-value=6 Score=37.31 Aligned_cols=60 Identities=10% Similarity=0.068 Sum_probs=40.8
Q ss_pred cchHHHhHHHHHHCCCeEEecCCCCC--ccccccCCC---------hhhhhhHhhhhhhhHHHHHHhhcCccc
Q 022376 6 VEDYFTGFKQLHCKGWRSVYLNPERP--QFLGTSTTN---------LNDSLVQGTRWSSGLVQVAISKYCPLI 67 (298)
Q Consensus 6 TED~~Tg~~~Lh~~Gwrs~Y~~~~l~--af~GlaP~~---------l~~~l~Qr~RWa~G~~qi~~~k~~Pl~ 67 (298)
.||...++| +..+|++..|++.... .+....|.+ ..+...+..||..+-.|.++. .+|-.
T Consensus 231 ~ED~dl~~R-~~~~G~~i~~~p~~~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~-~~p~~ 301 (472)
T 1xhb_A 231 GENLEISFR-IWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYI-ISPGV 301 (472)
T ss_dssp CCCSHHHHH-HHHTTCEEEEEEEEEEEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHH-TSTTG
T ss_pred chhHHHHHH-HHhcCCeEEEccCcEEEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh-hCccc
Confidence 699999999 9999999999865332 111122322 446677778999999998875 46643
No 4
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=50.66 E-value=21 Score=34.82 Aligned_cols=60 Identities=15% Similarity=0.093 Sum_probs=42.5
Q ss_pred cchHHHhHHHHHHCCCeEEecCCCCCc--cccccCCC-------hhhhhhHhhhhhhhHHHHHHhhcCccc
Q 022376 6 VEDYFTGFKQLHCKGWRSVYLNPERPQ--FLGTSTTN-------LNDSLVQGTRWSSGLVQVAISKYCPLI 67 (298)
Q Consensus 6 TED~~Tg~~~Lh~~Gwrs~Y~~~~l~a--f~GlaP~~-------l~~~l~Qr~RWa~G~~qi~~~k~~Pl~ 67 (298)
.||+..++| +..+||+.+|++..... +++-+|.+ ..+......||....-+.+.. .+|-.
T Consensus 311 ~ED~dl~~R-l~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~-~~p~~ 379 (570)
T 2d7i_A 311 GEQYEISFK-VWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQ-RRPEY 379 (570)
T ss_dssp SHHHHHHHH-HHHTTCEEEEEEEEEEEECCCSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHT-TCGGG
T ss_pred cchHHHHHH-HHhCCCeEEEccCeEEEEEccccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHh-cCccc
Confidence 499999999 99999999998654321 23434422 345566678999999998874 45643
No 5
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=40.20 E-value=13 Score=36.40 Aligned_cols=34 Identities=15% Similarity=0.061 Sum_probs=25.4
Q ss_pred cchHHHhHHHHHHCCCeEEecCCCCCccccccCCChh
Q 022376 6 VEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLN 42 (298)
Q Consensus 6 TED~~Tg~~~Lh~~Gwrs~Y~~~~l~af~GlaP~~l~ 42 (298)
.||...++| ++.+||+..|+++.... -..|++-.
T Consensus 303 ~ED~dl~~R-l~~~G~~i~~~p~~~v~--H~~~~~~~ 336 (625)
T 2z86_A 303 GEDNEFGYR-LYREGCYFRSVEGAMAY--HQEPPGKE 336 (625)
T ss_dssp CHHHHHHHH-HHHTTCEEEECGGGCEE--EECCC---
T ss_pred cchhhhhhh-HHhCCceEEEcccchhh--ccCCcccc
Confidence 599999999 99999999999765544 55555543
No 6
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=28.83 E-value=34 Score=32.35 Aligned_cols=60 Identities=12% Similarity=0.079 Sum_probs=37.6
Q ss_pred cchHHHhHHHHHHCCCeEEecCCCCCc--cccccCCC---------hhhhhhHhhhhhhhHHHHHHhhcCccc
Q 022376 6 VEDYFTGFKQLHCKGWRSVYLNPERPQ--FLGTSTTN---------LNDSLVQGTRWSSGLVQVAISKYCPLI 67 (298)
Q Consensus 6 TED~~Tg~~~Lh~~Gwrs~Y~~~~l~a--f~GlaP~~---------l~~~l~Qr~RWa~G~~qi~~~k~~Pl~ 67 (298)
.||+..++| +...|++..|++..... ++.-.|.+ ..+......+|..+-.+.+++ .+|..
T Consensus 263 ~ED~dl~~R-l~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~~~~~~~~n~~r~~~~w~d~~~~~~y~-~~p~~ 333 (501)
T 2ffu_A 263 GENLEISFR-VWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYA-AVPSA 333 (501)
T ss_dssp SHHHHHHHH-HHHTTCEEEEEEEEEEEECCCSSCCSCCTTCHHHHHHHHHHHHHHHHCGGGHHHHHH-HCGGG
T ss_pred cchHHHHHH-HHhcCCeEEEccCcEEEEEccCcCCCcCCccchhHHHHHHHHHHHHHHHHHHHHHhh-cCccc
Confidence 699999999 99999999988632211 11112221 233344456677777777664 36765
No 7
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=23.44 E-value=39 Score=33.77 Aligned_cols=44 Identities=14% Similarity=0.108 Sum_probs=29.9
Q ss_pred cchHHHhHHHHHHCCCeEEecCCCCCccc--c-ccCC--ChhhhhhHhhhh
Q 022376 6 VEDYFTGFKQLHCKGWRSVYLNPERPQFL--G-TSTT--NLNDSLVQGTRW 51 (298)
Q Consensus 6 TED~~Tg~~~Lh~~Gwrs~Y~~~~l~af~--G-laP~--~l~~~l~Qr~RW 51 (298)
-||+.-++| +..+||+.+|++.... ++ + ..+. ....|+..|.|+
T Consensus 390 ~ED~Dl~lR-~~~~G~ki~~~p~a~V-~H~~~~~~~~~s~~r~Yy~~RN~l 438 (657)
T 4fix_A 390 WDDADYGLR-AAEHGYPTVTLPGAAI-WHMAWSDKDDAIDWQAYFHLRNRL 438 (657)
T ss_dssp SHHHHHHHH-HHHTTCCEEEEEEEEE-EECCSSSSCCTTSTHHHHHHHHHH
T ss_pred CcHHHHHHH-HHHcCCeEEEECCEEE-EEcCcCccccccHHHHHHHHHHHH
Confidence 399999999 9999999998865442 22 1 1111 256677777665
No 8
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=14.30 E-value=1.1e+02 Score=25.80 Aligned_cols=22 Identities=9% Similarity=-0.112 Sum_probs=19.4
Q ss_pred cchHHHhHHHHHHCCCeEEecCC
Q 022376 6 VEDYFTGFKQLHCKGWRSVYLNP 28 (298)
Q Consensus 6 TED~~Tg~~~Lh~~Gwrs~Y~~~ 28 (298)
-||..-++| ++.+||+..|++.
T Consensus 177 ~~D~Dl~~R-~~~~G~~~~~~p~ 198 (249)
T 2nxv_A 177 YYGADLCLQ-AEFLGGRAYAIDF 198 (249)
T ss_dssp SHHHHHHHH-HHHTTCEEEECCC
T ss_pred eehhHHHHH-HHHcCCeEEEecc
Confidence 389999999 9999999999853
No 9
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=13.90 E-value=33 Score=28.59 Aligned_cols=47 Identities=9% Similarity=-0.039 Sum_probs=25.6
Q ss_pred ccchHHHhHHHHHHCCCeEEecCCCCCccccccCCChhhhh--hHhhhhhhh
Q 022376 5 LVEDYFTGFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSL--VQGTRWSSG 54 (298)
Q Consensus 5 iTED~~Tg~~~Lh~~Gwrs~Y~~~~l~af~GlaP~~l~~~l--~Qr~RWa~G 54 (298)
..||....++ +..+| +.+|+++.+.. .-..|.+..... .|+.||.+.
T Consensus 187 ~~eD~~~~~r-~~~~g-~~~~~~~~~~~-~r~~~~s~s~~~~~~~~~~~~~~ 235 (255)
T 1qg8_A 187 RIGDARFFWR-VNHFY-PFYPLDEELDL-NYITDQSIHFQLFELEKNEFVRN 235 (255)
T ss_dssp TTHHHHHHHH-HTTTC-CBEEEEEEEEE-EEEC--------------CTGGG
T ss_pred hHHHHHHHHH-HHHhC-CEEEecCcEEE-EEEcCCccchhHHHHHHHHHHHh
Confidence 5799999999 99887 78888776544 344667666655 455555543
No 10
>3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503}
Probab=12.08 E-value=37 Score=31.27 Aligned_cols=44 Identities=14% Similarity=0.238 Sum_probs=29.1
Q ss_pred cchHHHhHHHHHHCCCeEEecCCCC-CccccccCCCh---hhhhhHhhhhh
Q 022376 6 VEDYFTGFKQLHCKGWRSVYLNPER-PQFLGTSTTNL---NDSLVQGTRWS 52 (298)
Q Consensus 6 TED~~Tg~~~Lh~~Gwrs~Y~~~~l-~af~GlaP~~l---~~~l~Qr~RWa 52 (298)
=||..-.+..+..|||.++=+.+-+ -.|.+ |..+ .....|| ||.
T Consensus 36 f~DLD~afdEavERGYNTVRIcAmP~LLf~~--p~~l~~l~pl~gQr-rW~ 83 (393)
T 3gyc_A 36 YEDWDQVLDELSERGYNAIRIDAYPHLIAEN--PMKKWLLKEVWNQQ-DWG 83 (393)
T ss_dssp CSCHHHHHHHHHHTTCCEEEEECCHHHHHHC--TTCCEEECCSCSSS-SSS
T ss_pred hhHHHHHHHHHHHcCCCeEEeccccceeecC--Ccchhhcccccccc-ccC
Confidence 4888888888999999988664321 12223 4443 4447799 994
Done!