Query 022377
Match_columns 298
No_of_seqs 187 out of 2569
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 04:29:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022377.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022377hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tv8_A MOAA, molybdenum cofact 100.0 2.3E-46 7.8E-51 336.8 31.1 292 5-298 40-340 (340)
2 3can_A Pyruvate-formate lyase- 99.9 5E-22 1.7E-26 162.4 17.2 132 33-169 5-142 (182)
3 3c8f_A Pyruvate formate-lyase 99.8 4.4E-20 1.5E-24 157.3 16.2 150 11-165 46-205 (245)
4 2yx0_A Radical SAM enzyme; pre 99.8 5.4E-19 1.9E-23 158.5 18.6 171 11-185 101-300 (342)
5 2z2u_A UPF0026 protein MJ0257; 99.8 2.9E-19 1E-23 158.1 14.7 167 11-186 86-279 (311)
6 2a5h_A L-lysine 2,3-aminomutas 99.8 4.3E-18 1.5E-22 156.1 18.2 212 12-244 142-367 (416)
7 3rfa_A Ribosomal RNA large sub 99.8 4.8E-17 1.6E-21 147.2 19.2 156 12-170 140-320 (404)
8 3iix_A Biotin synthetase, puta 99.7 9.5E-17 3.2E-21 144.1 18.7 169 13-185 82-254 (348)
9 1r30_A Biotin synthase; SAM ra 99.6 1.5E-14 5.2E-19 130.8 19.7 168 12-184 96-270 (369)
10 3t7v_A Methylornithine synthas 99.6 8.2E-15 2.8E-19 131.6 16.4 174 12-188 88-269 (350)
11 2qgq_A Protein TM_1862; alpha- 99.4 2.4E-11 8.4E-16 106.8 20.9 158 11-169 29-201 (304)
12 1olt_A Oxygen-independent copr 99.3 2.4E-11 8.3E-16 112.7 15.6 134 32-166 105-247 (457)
13 2cw6_A Hydroxymethylglutaryl-C 98.4 3.7E-06 1.3E-10 73.3 12.1 173 2-189 13-199 (298)
14 1ydn_A Hydroxymethylglutaryl-C 98.3 4.8E-06 1.6E-10 72.5 11.5 143 2-155 12-170 (295)
15 2ftp_A Hydroxymethylglutaryl-C 97.5 0.0027 9.2E-08 55.2 14.1 145 2-155 16-174 (302)
16 3ivs_A Homocitrate synthase, m 97.4 0.0032 1.1E-07 57.0 14.5 144 2-155 47-195 (423)
17 1ydo_A HMG-COA lyase; TIM-barr 97.4 0.0021 7.2E-08 56.0 12.6 144 2-155 14-172 (307)
18 3ewb_X 2-isopropylmalate synth 97.3 0.0078 2.7E-07 52.0 15.2 175 2-190 13-194 (293)
19 2ztj_A Homocitrate synthase; ( 97.3 0.0057 1.9E-07 55.0 13.9 169 2-187 11-185 (382)
20 3ble_A Citramalate synthase fr 97.0 0.0049 1.7E-07 54.4 11.1 172 2-189 27-212 (337)
21 3rmj_A 2-isopropylmalate synth 96.9 0.017 5.7E-07 51.6 13.4 174 2-189 20-200 (370)
22 3eeg_A 2-isopropylmalate synth 96.7 0.011 3.6E-07 51.9 10.4 175 2-189 14-194 (325)
23 1nvm_A HOA, 4-hydroxy-2-oxoval 96.4 0.034 1.2E-06 49.1 11.6 165 2-188 16-191 (345)
24 4fhd_A Spore photoproduct lyas 95.9 0.066 2.3E-06 47.5 10.7 130 15-149 140-280 (368)
25 2nx9_A Oxaloacetate decarboxyl 95.8 0.21 7.1E-06 45.8 14.2 156 13-188 25-200 (464)
26 1rqb_A Transcarboxylase 5S sub 95.6 0.22 7.6E-06 46.5 13.6 156 13-188 42-217 (539)
27 2y7e_A 3-keto-5-aminohexanoate 95.4 0.21 7.1E-06 42.6 11.7 128 13-151 29-165 (282)
28 3lot_A Uncharacterized protein 95.3 0.37 1.3E-05 41.7 13.1 135 11-154 25-192 (314)
29 1qwg_A PSL synthase;, (2R)-pho 95.1 1.2 4.2E-05 37.0 18.4 130 14-162 22-170 (251)
30 3chv_A Prokaryotic domain of u 95.0 0.32 1.1E-05 41.5 11.9 130 13-154 29-166 (284)
31 3c6c_A 3-keto-5-aminohexanoate 95.0 0.55 1.9E-05 40.6 13.2 133 13-154 43-204 (316)
32 3e49_A Uncharacterized protein 94.5 0.46 1.6E-05 41.1 11.7 135 11-154 25-190 (311)
33 3e02_A Uncharacterized protein 94.4 0.42 1.4E-05 41.3 11.2 136 11-154 25-190 (311)
34 1u83_A Phosphosulfolactate syn 94.2 1.8 6.1E-05 36.4 14.1 129 14-161 49-193 (276)
35 3no5_A Uncharacterized protein 93.8 0.68 2.3E-05 39.3 11.2 130 11-151 23-160 (275)
36 3dxi_A Putative aldolase; TIM 93.0 0.31 1.1E-05 42.4 8.0 112 3-132 11-135 (320)
37 1ydn_A Hydroxymethylglutaryl-C 90.8 6.3 0.00021 33.5 13.7 23 15-37 152-174 (295)
38 2d73_A Alpha-glucosidase SUSB; 90.0 4.2 0.00014 39.2 12.7 106 14-124 367-502 (738)
39 3bg3_A Pyruvate carboxylase, m 89.2 14 0.00047 35.7 15.8 157 13-189 120-304 (718)
40 3hq1_A 2-isopropylmalate synth 88.9 2.9 0.0001 39.7 10.6 144 2-152 79-238 (644)
41 2ftp_A Hydroxymethylglutaryl-C 88.4 11 0.00038 32.1 14.1 122 14-151 155-284 (302)
42 3flu_A DHDPS, dihydrodipicolin 88.3 8.8 0.0003 32.7 12.7 110 11-131 21-140 (297)
43 3si9_A DHDPS, dihydrodipicolin 88.1 8.6 0.00029 33.1 12.5 110 11-131 36-155 (315)
44 3na8_A Putative dihydrodipicol 87.5 8.6 0.0003 33.1 12.1 109 11-130 38-156 (315)
45 2r8w_A AGR_C_1641P; APC7498, d 87.0 7.2 0.00025 33.9 11.4 108 11-129 48-165 (332)
46 3b4u_A Dihydrodipicolinate syn 87.0 13 0.00045 31.5 13.6 110 11-130 17-139 (294)
47 1w3i_A EDA, 2-keto-3-deoxy glu 86.7 8 0.00027 32.9 11.4 109 11-130 13-129 (293)
48 3cpr_A Dihydrodipicolinate syn 86.7 14 0.00048 31.5 14.5 109 11-130 30-148 (304)
49 2v9d_A YAGE; dihydrodipicolini 86.7 15 0.00053 31.9 14.0 108 11-129 45-162 (343)
50 3fkr_A L-2-keto-3-deoxyarabona 86.0 4.8 0.00017 34.6 9.7 132 11-151 22-163 (309)
51 3d0c_A Dihydrodipicolinate syn 85.8 16 0.00055 31.3 13.0 109 11-131 26-144 (314)
52 3l21_A DHDPS, dihydrodipicolin 85.8 5.2 0.00018 34.3 9.8 109 11-130 29-147 (304)
53 2wkj_A N-acetylneuraminate lya 85.7 16 0.00054 31.2 14.0 109 11-130 25-144 (303)
54 2rfg_A Dihydrodipicolinate syn 85.6 7.5 0.00026 33.2 10.7 109 11-130 14-132 (297)
55 3tak_A DHDPS, dihydrodipicolin 85.6 16 0.00054 31.0 13.8 109 11-130 15-133 (291)
56 2nuw_A 2-keto-3-deoxygluconate 85.5 2.7 9.2E-05 35.8 7.8 109 11-130 13-129 (288)
57 3daq_A DHDPS, dihydrodipicolin 85.3 8.6 0.00029 32.7 10.9 106 14-130 19-134 (292)
58 2yxg_A DHDPS, dihydrodipicolin 85.2 16 0.00055 30.9 12.9 108 12-130 15-132 (289)
59 1xky_A Dihydrodipicolinate syn 85.2 17 0.00057 31.0 15.0 108 11-129 26-143 (301)
60 1o5k_A DHDPS, dihydrodipicolin 85.1 17 0.00059 31.0 12.8 108 12-130 27-144 (306)
61 3qfe_A Putative dihydrodipicol 84.9 4.6 0.00016 34.9 9.1 112 11-131 25-146 (318)
62 1f6k_A N-acetylneuraminate lya 84.8 17 0.00059 30.8 13.9 109 11-130 17-136 (293)
63 3qze_A DHDPS, dihydrodipicolin 84.7 18 0.00062 31.0 14.2 110 11-131 37-156 (314)
64 3m5v_A DHDPS, dihydrodipicolin 84.7 18 0.0006 30.8 12.9 109 11-130 21-140 (301)
65 2ehh_A DHDPS, dihydrodipicolin 84.5 18 0.00061 30.7 13.1 108 12-130 15-132 (294)
66 3eb2_A Putative dihydrodipicol 84.3 3.1 0.00011 35.6 7.7 111 11-131 18-137 (300)
67 2ojp_A DHDPS, dihydrodipicolin 84.3 18 0.00062 30.6 13.6 108 11-129 15-132 (292)
68 2vc6_A MOSA, dihydrodipicolina 84.2 9.5 0.00032 32.4 10.6 109 11-130 14-132 (292)
69 3r12_A Deoxyribose-phosphate a 84.0 17 0.0006 30.2 13.4 126 12-156 53-189 (260)
70 1qop_A Tryptophan synthase alp 83.9 18 0.00061 30.2 12.6 119 14-150 27-171 (268)
71 3ngj_A Deoxyribose-phosphate a 83.8 17 0.00058 29.9 11.9 127 12-156 37-173 (239)
72 3a5f_A Dihydrodipicolinate syn 83.3 3.8 0.00013 34.9 7.8 106 12-129 17-132 (291)
73 4dpp_A DHDPS 2, dihydrodipicol 82.8 8.8 0.0003 33.8 10.0 107 11-129 73-188 (360)
74 3s5o_A 4-hydroxy-2-oxoglutarat 82.8 6 0.0002 33.9 8.9 112 11-131 28-149 (307)
75 3dz1_A Dihydrodipicolinate syn 82.6 9 0.00031 32.9 10.0 128 11-151 22-161 (313)
76 2r91_A 2-keto-3-deoxy-(6-phosp 82.5 3.1 0.0001 35.4 6.8 107 12-130 13-128 (286)
77 3inp_A D-ribulose-phosphate 3- 81.6 6.2 0.00021 32.7 8.2 119 21-156 99-219 (246)
78 1mzh_A Deoxyribose-phosphate a 81.3 20 0.00069 29.0 12.5 128 12-157 14-149 (225)
79 2hmc_A AGR_L_411P, dihydrodipi 79.2 31 0.0011 30.0 13.7 109 11-130 40-157 (344)
80 3hgj_A Chromate reductase; TIM 79.2 10 0.00036 33.0 9.3 81 11-92 138-260 (349)
81 2ekc_A AQ_1548, tryptophan syn 78.9 27 0.00091 29.0 12.9 119 13-149 26-170 (262)
82 3gr7_A NADPH dehydrogenase; fl 78.8 6.9 0.00024 34.1 7.9 82 11-92 130-250 (340)
83 3hbl_A Pyruvate carboxylase; T 78.5 57 0.0019 33.4 15.5 155 14-188 551-734 (1150)
84 2qf7_A Pyruvate carboxylase pr 78.3 26 0.00087 36.0 13.0 156 13-188 568-751 (1165)
85 3e96_A Dihydrodipicolinate syn 78.3 31 0.0011 29.5 12.7 107 12-130 27-143 (316)
86 4ab4_A Xenobiotic reductase B; 78.3 13 0.00044 32.7 9.6 83 11-93 139-264 (362)
87 2pcq_A Putative dihydrodipicol 77.9 10 0.00035 32.1 8.6 106 11-130 12-124 (283)
88 1s4d_A Uroporphyrin-III C-meth 77.5 10 0.00035 31.9 8.5 58 14-73 75-132 (280)
89 3h5d_A DHDPS, dihydrodipicolin 77.1 34 0.0012 29.2 12.9 109 11-130 21-140 (311)
90 3ndc_A Precorrin-4 C(11)-methy 77.0 6 0.00021 33.1 6.8 59 14-74 59-117 (264)
91 1ydo_A HMG-COA lyase; TIM-barr 76.9 33 0.0011 29.2 11.6 26 49-75 160-186 (307)
92 3ndo_A Deoxyribose-phosphate a 76.8 29 0.001 28.3 11.4 125 12-156 23-162 (231)
93 3oa3_A Aldolase; structural ge 76.6 34 0.0012 29.0 14.1 127 13-156 69-204 (288)
94 3a24_A Alpha-galactosidase; gl 76.6 16 0.00053 34.8 10.1 101 14-124 305-419 (641)
95 3eeg_A 2-isopropylmalate synth 76.5 26 0.0009 30.2 10.9 23 15-37 148-170 (325)
96 3ble_A Citramalate synthase fr 75.5 39 0.0013 29.2 13.2 101 18-134 137-247 (337)
97 4e16_A Precorrin-4 C(11)-methy 75.5 11 0.00039 31.1 8.1 59 14-74 60-118 (253)
98 3p6l_A Sugar phosphate isomera 74.6 32 0.0011 28.0 10.7 18 75-92 26-43 (262)
99 1nvm_A HOA, 4-hydroxy-2-oxoval 72.8 42 0.0014 29.1 11.4 117 14-151 145-269 (345)
100 1z41_A YQJM, probable NADH-dep 72.5 21 0.00073 30.8 9.4 81 11-92 130-250 (338)
101 2pgw_A Muconate cycloisomerase 72.0 35 0.0012 29.9 10.9 117 13-152 199-317 (384)
102 3gka_A N-ethylmaleimide reduct 71.3 15 0.00053 32.2 8.2 82 11-92 147-271 (361)
103 3hh1_A Tetrapyrrole methylase 70.6 16 0.00055 26.1 7.0 45 20-67 69-114 (117)
104 3apt_A Methylenetetrahydrofola 69.8 52 0.0018 28.1 12.8 45 14-58 82-137 (310)
105 1x7f_A Outer surface protein; 69.2 16 0.00055 32.3 7.8 138 15-155 38-199 (385)
106 3gnh_A L-lysine, L-arginine ca 68.8 54 0.0018 28.3 11.5 71 14-89 163-245 (403)
107 3inp_A D-ribulose-phosphate 3- 68.8 48 0.0016 27.3 10.8 112 16-147 38-155 (246)
108 3ewb_X 2-isopropylmalate synth 68.4 54 0.0018 27.7 12.9 26 49-75 153-179 (293)
109 1z41_A YQJM, probable NADH-dep 68.3 20 0.00068 31.0 8.3 75 14-91 225-307 (338)
110 2nx9_A Oxaloacetate decarboxyl 68.3 70 0.0024 29.0 13.1 114 16-151 156-276 (464)
111 3vni_A Xylose isomerase domain 67.9 50 0.0017 27.2 11.6 128 20-150 19-175 (294)
112 2cw6_A Hydroxymethylglutaryl-C 67.5 56 0.0019 27.6 13.4 122 14-151 152-281 (298)
113 3vnd_A TSA, tryptophan synthas 67.4 33 0.0011 28.6 9.2 110 48-159 5-129 (267)
114 2p0o_A Hypothetical protein DU 67.2 20 0.00069 31.6 8.0 138 15-155 14-173 (372)
115 1qwg_A PSL synthase;, (2R)-pho 67.2 51 0.0017 27.2 9.9 105 14-127 51-165 (251)
116 3l8h_A Putative haloacid dehal 66.0 14 0.00047 28.1 6.2 28 43-72 27-54 (179)
117 3l5a_A NADH/flavin oxidoreduct 65.5 27 0.00093 31.3 8.7 82 12-94 157-288 (419)
118 1ub3_A Aldolase protein; schif 65.0 54 0.0018 26.5 13.3 128 12-156 13-149 (220)
119 3ovp_A Ribulose-phosphate 3-ep 64.7 22 0.00076 28.9 7.4 114 22-156 78-193 (228)
120 3fst_A 5,10-methylenetetrahydr 63.9 68 0.0023 27.3 15.3 120 14-148 93-226 (304)
121 2ybo_A Methyltransferase; SUMT 63.9 17 0.00057 30.8 6.8 58 14-73 85-142 (294)
122 3apt_A Methylenetetrahydrofola 63.5 69 0.0024 27.3 13.1 102 75-188 33-138 (310)
123 3dip_A Enolase; structural gen 63.3 60 0.002 28.8 10.6 99 12-130 221-322 (410)
124 2qul_A D-tagatose 3-epimerase; 63.2 47 0.0016 27.2 9.5 108 20-131 19-153 (290)
125 3l5l_A Xenobiotic reductase A; 63.0 25 0.00087 30.7 8.0 81 12-93 145-268 (363)
126 1w8s_A FBP aldolase, fructose- 62.9 64 0.0022 26.7 10.9 127 16-160 39-179 (263)
127 3bg3_A Pyruvate carboxylase, m 62.7 84 0.0029 30.3 12.0 117 14-151 257-380 (718)
128 1cbf_A Cobalt-precorrin-4 tran 62.5 19 0.00063 30.3 6.8 58 14-73 76-133 (285)
129 1f76_A Dihydroorotate dehydrog 62.4 30 0.001 29.8 8.3 76 14-91 221-318 (336)
130 3lmz_A Putative sugar isomeras 62.3 61 0.0021 26.2 10.8 93 47-157 31-130 (257)
131 3nut_A Precorrin-3 methylase; 61.8 65 0.0022 26.3 11.7 91 22-124 70-164 (251)
132 4ay7_A Methylcobalamin\: coenz 61.6 78 0.0027 27.2 12.5 64 25-93 197-269 (348)
133 2zvr_A Uncharacterized protein 61.4 68 0.0023 26.4 11.2 100 18-124 41-162 (290)
134 3cu2_A Ribulose-5-phosphate 3- 61.3 42 0.0014 27.4 8.5 110 21-146 82-205 (237)
135 3gr7_A NADPH dehydrogenase; fl 61.1 32 0.0011 29.8 8.2 74 15-91 226-307 (340)
136 2rdx_A Mandelate racemase/muco 60.9 84 0.0029 27.4 12.3 115 13-153 198-314 (379)
137 2hk0_A D-psicose 3-epimerase; 60.8 72 0.0025 26.6 10.5 122 24-151 42-195 (309)
138 2eja_A URO-D, UPD, uroporphyri 60.6 79 0.0027 27.0 12.9 60 26-90 187-258 (338)
139 1ve2_A Uroporphyrin-III C-meth 59.7 29 0.00098 28.1 7.3 58 14-73 61-118 (235)
140 1mdl_A Mandelate racemase; iso 59.3 57 0.002 28.2 9.6 97 13-129 198-296 (359)
141 3cqj_A L-ribulose-5-phosphate 59.2 41 0.0014 27.8 8.5 127 17-154 107-255 (295)
142 3ngf_A AP endonuclease, family 59.2 18 0.00061 29.8 6.0 78 16-95 91-187 (269)
143 2obb_A Hypothetical protein; s 59.0 24 0.00081 26.4 6.1 67 85-159 3-71 (142)
144 1va0_A Uroporphyrin-III C-meth 59.0 26 0.0009 28.4 7.0 58 14-73 58-115 (239)
145 3l5l_A Xenobiotic reductase A; 58.6 23 0.0008 31.0 6.9 74 15-91 243-325 (363)
146 1rqb_A Transcarboxylase 5S sub 57.7 99 0.0034 28.7 11.2 115 16-151 173-295 (539)
147 3b0p_A TRNA-dihydrouridine syn 57.7 57 0.002 28.3 9.3 75 16-91 68-164 (350)
148 1tqj_A Ribulose-phosphate 3-ep 57.6 74 0.0025 25.6 13.7 99 17-135 16-121 (230)
149 3kru_A NADH:flavin oxidoreduct 57.3 28 0.00094 30.3 7.1 81 12-93 130-251 (343)
150 2r14_A Morphinone reductase; H 57.2 27 0.00092 30.8 7.1 83 11-93 152-277 (377)
151 3i4k_A Muconate lactonizing en 57.1 1E+02 0.0034 27.0 12.8 98 12-129 202-301 (383)
152 1n7k_A Deoxyribose-phosphate a 56.9 79 0.0027 25.8 12.4 125 12-156 30-164 (234)
153 2inf_A URO-D, UPD, uroporphyri 56.9 96 0.0033 26.8 13.4 60 25-90 200-271 (359)
154 2qde_A Mandelate racemase/muco 56.9 68 0.0023 28.2 9.8 100 12-131 197-298 (397)
155 3q12_A Pantoate--beta-alanine 56.5 36 0.0012 28.7 7.3 134 15-158 8-175 (287)
156 2zad_A Muconate cycloisomerase 56.4 72 0.0024 27.4 9.7 116 12-151 190-309 (345)
157 3qxb_A Putative xylose isomera 56.3 72 0.0024 26.7 9.6 126 21-149 38-200 (316)
158 3nav_A Tryptophan synthase alp 56.2 69 0.0024 26.7 9.1 105 48-158 7-130 (271)
159 3ctl_A D-allulose-6-phosphate 56.1 80 0.0027 25.6 14.0 110 17-146 12-126 (231)
160 2ztj_A Homocitrate synthase; ( 56.0 65 0.0022 28.3 9.4 11 109-119 234-244 (382)
161 4dwd_A Mandelate racemase/muco 55.9 96 0.0033 27.3 10.5 99 12-130 199-298 (393)
162 3tjl_A NADPH dehydrogenase; OL 55.3 49 0.0017 29.5 8.4 82 11-92 153-287 (407)
163 3a5v_A Alpha-galactosidase; be 55.3 60 0.002 28.7 9.1 79 14-94 22-132 (397)
164 1r3s_A URO-D, uroporphyrinogen 55.1 1E+02 0.0036 26.6 12.4 61 26-90 205-282 (367)
165 1pzr_A Erythronolide synthase; 55.1 5.3 0.00018 25.3 1.5 33 16-57 2-39 (60)
166 3k13_A 5-methyltetrahydrofolat 55.1 97 0.0033 26.3 14.6 124 14-155 33-171 (300)
167 2ovl_A Putative racemase; stru 54.7 1.1E+02 0.0036 26.6 10.8 97 13-129 200-298 (371)
168 1ps9_A 2,4-dienoyl-COA reducta 54.5 40 0.0014 32.0 8.3 75 14-91 224-310 (671)
169 2pgw_A Muconate cycloisomerase 54.3 1.1E+02 0.0036 26.8 10.6 135 15-156 146-295 (384)
170 4exq_A UPD, URO-D, uroporphyri 54.3 73 0.0025 27.8 9.4 59 28-90 207-279 (368)
171 3hgj_A Chromate reductase; TIM 54.2 58 0.002 28.2 8.7 75 14-91 235-318 (349)
172 3rmj_A 2-isopropylmalate synth 54.1 1.1E+02 0.0038 26.7 12.2 24 50-74 161-185 (370)
173 1sjd_A N-acylamino acid racema 53.9 97 0.0033 26.8 10.2 94 13-127 192-287 (368)
174 3nav_A Tryptophan synthase alp 53.7 97 0.0033 25.8 13.5 119 13-149 29-173 (271)
175 3iwp_A Copper homeostasis prot 53.4 46 0.0016 28.1 7.5 72 21-94 169-241 (287)
176 2oz8_A MLL7089 protein; struct 53.1 1.2E+02 0.004 26.6 10.8 94 13-130 199-296 (389)
177 2nql_A AGR_PAT_674P, isomerase 53.0 51 0.0017 28.9 8.3 96 13-129 217-314 (388)
178 2qbu_A Precorrin-2 methyltrans 53.0 85 0.0029 25.0 13.7 54 18-73 81-134 (232)
179 1jub_A Dihydroorotate dehydrog 52.9 79 0.0027 26.6 9.3 76 15-91 103-192 (311)
180 2yci_X 5-methyltetrahydrofolat 52.4 1E+02 0.0035 25.7 11.9 121 15-155 31-162 (271)
181 3ivs_A Homocitrate synthase, m 52.4 72 0.0025 28.6 9.1 57 17-75 150-209 (423)
182 1twd_A Copper homeostasis prot 52.2 52 0.0018 27.3 7.5 66 23-91 133-198 (256)
183 3ctl_A D-allulose-6-phosphate 51.3 56 0.0019 26.5 7.6 118 23-156 72-191 (231)
184 1tzz_A Hypothetical protein L1 51.2 1E+02 0.0034 27.0 9.9 94 13-126 219-318 (392)
185 2qf7_A Pyruvate carboxylase pr 51.2 2.1E+02 0.0073 29.2 13.3 116 15-151 706-827 (1165)
186 3inn_A Pantothenate synthetase 50.8 48 0.0016 28.4 7.2 135 15-159 26-192 (314)
187 1wa3_A 2-keto-3-deoxy-6-phosph 50.5 56 0.0019 25.5 7.5 70 14-91 18-89 (205)
188 3ovp_A Ribulose-phosphate 3-ep 50.3 99 0.0034 24.9 12.0 112 15-146 14-132 (228)
189 2gou_A Oxidoreductase, FMN-bin 50.2 83 0.0028 27.4 9.1 83 11-93 147-272 (365)
190 2ox4_A Putative mandelate race 49.8 1.1E+02 0.0037 26.9 9.9 141 12-156 142-314 (403)
191 3ffs_A Inosine-5-monophosphate 49.6 1E+02 0.0035 27.3 9.6 65 22-92 147-213 (400)
192 3bjs_A Mandelate racemase/muco 49.5 89 0.003 27.9 9.4 118 12-153 237-357 (428)
193 1r0m_A N-acylamino acid racema 49.4 68 0.0023 27.9 8.5 94 13-127 198-293 (375)
194 1nu5_A Chloromuconate cycloiso 49.4 1.3E+02 0.0044 26.0 10.8 98 13-130 197-296 (370)
195 2e0n_A Precorrin-2 C20-methylt 49.4 25 0.00084 29.0 5.3 54 18-73 83-136 (259)
196 2qgy_A Enolase from the enviro 49.0 1.4E+02 0.0047 26.2 10.6 99 13-131 203-303 (391)
197 2p8b_A Mandelate racemase/muco 49.0 44 0.0015 29.1 7.1 117 14-153 195-314 (369)
198 1pjq_A CYSG, siroheme synthase 48.8 27 0.00093 31.6 5.8 59 13-73 275-333 (457)
199 3ajx_A 3-hexulose-6-phosphate 48.6 93 0.0032 24.2 10.6 96 14-129 9-108 (207)
200 1qys_A TOP7; alpha-beta, novel 48.3 34 0.0011 22.6 4.6 50 44-94 29-85 (106)
201 3hbl_A Pyruvate carboxylase; T 48.1 1.8E+02 0.0063 29.7 12.3 117 14-151 688-810 (1150)
202 3tva_A Xylose isomerase domain 48.1 66 0.0023 26.4 7.9 78 16-95 100-186 (290)
203 2o56_A Putative mandelate race 47.9 1.4E+02 0.0049 26.1 10.6 140 12-155 148-319 (407)
204 1ep3_A Dihydroorotate dehydrog 47.3 64 0.0022 27.0 7.8 75 16-91 109-196 (311)
205 1tkk_A Similar to chloromucona 47.2 1.3E+02 0.0044 26.0 9.9 118 13-153 194-315 (366)
206 1jub_A Dihydroorotate dehydrog 47.1 1.1E+02 0.0036 25.8 9.1 25 15-39 169-193 (311)
207 2yxb_A Coenzyme B12-dependent 46.9 52 0.0018 25.0 6.4 70 13-86 54-123 (161)
208 3q94_A Fructose-bisphosphate a 46.8 1.3E+02 0.0045 25.3 14.5 163 13-188 27-205 (288)
209 3do6_A Formate--tetrahydrofola 46.4 72 0.0025 29.2 7.9 50 109-159 346-395 (543)
210 3ktc_A Xylose isomerase; putat 46.2 1.3E+02 0.0046 25.3 10.8 112 13-132 31-167 (333)
211 3bdk_A D-mannonate dehydratase 46.1 1E+02 0.0035 27.1 9.0 66 23-90 35-123 (386)
212 4avf_A Inosine-5'-monophosphat 45.6 1.4E+02 0.0046 27.3 10.1 118 21-147 231-352 (490)
213 3b0p_A TRNA-dihydrouridine syn 45.5 74 0.0025 27.6 8.0 73 15-91 141-225 (350)
214 2gou_A Oxidoreductase, FMN-bin 45.5 62 0.0021 28.2 7.5 72 14-91 246-322 (365)
215 3aty_A Tcoye, prostaglandin F2 45.4 73 0.0025 28.0 8.0 70 15-91 263-336 (379)
216 1h1y_A D-ribulose-5-phosphate 45.4 39 0.0013 27.1 5.8 111 24-156 80-197 (228)
217 1vyr_A Pentaerythritol tetrani 45.3 54 0.0019 28.6 7.1 72 14-91 247-323 (364)
218 1chr_A Chloromuconate cycloiso 45.2 1.5E+02 0.0052 25.6 10.1 98 12-129 196-295 (370)
219 3ozy_A Putative mandelate race 45.2 1.6E+02 0.0054 25.8 11.4 98 12-129 203-303 (389)
220 1vyr_A Pentaerythritol tetrani 45.1 77 0.0026 27.6 8.1 83 11-93 147-273 (364)
221 3dx5_A Uncharacterized protein 45.1 1.2E+02 0.0042 24.6 10.6 125 14-150 14-163 (286)
222 2hsa_B 12-oxophytodienoate red 45.0 54 0.0019 29.1 7.1 83 11-93 157-288 (402)
223 3khj_A Inosine-5-monophosphate 44.9 1.6E+02 0.0053 25.7 11.7 112 25-147 111-227 (361)
224 1gte_A Dihydropyrimidine dehyd 44.4 1.7E+02 0.006 29.3 11.5 75 16-91 646-735 (1025)
225 2ovl_A Putative racemase; stru 44.2 1.2E+02 0.0041 26.2 9.3 137 15-156 145-296 (371)
226 2dqw_A Dihydropteroate synthas 44.0 1.5E+02 0.005 25.1 11.9 125 8-155 42-192 (294)
227 2z6i_A Trans-2-enoyl-ACP reduc 44.0 56 0.0019 28.0 6.9 61 20-91 77-137 (332)
228 2gdq_A YITF; mandelate racemas 43.9 88 0.003 27.3 8.3 99 12-130 192-293 (382)
229 3fvv_A Uncharacterized protein 43.8 75 0.0026 24.7 7.3 29 42-72 91-119 (232)
230 3ol0_A De novo designed monome 43.6 15 0.00052 22.0 2.2 31 224-254 12-42 (48)
231 3tva_A Xylose isomerase domain 43.4 1.3E+02 0.0045 24.5 12.6 118 22-151 25-176 (290)
232 2gjl_A Hypothetical protein PA 43.3 93 0.0032 26.4 8.2 61 20-91 85-145 (328)
233 2r14_A Morphinone reductase; H 43.3 41 0.0014 29.6 6.0 25 16-40 253-277 (377)
234 2jvf_A De novo protein M7; tet 43.1 31 0.0011 22.3 3.7 45 107-154 29-78 (96)
235 1ps9_A 2,4-dienoyl-COA reducta 42.9 67 0.0023 30.4 7.9 81 12-92 128-249 (671)
236 4fo4_A Inosine 5'-monophosphat 42.8 1.7E+02 0.0058 25.5 9.9 63 24-92 113-178 (366)
237 3bw2_A 2-nitropropane dioxygen 42.8 1.1E+02 0.0039 26.4 8.8 62 20-91 111-172 (369)
238 2dh2_A 4F2 cell-surface antige 42.5 62 0.0021 28.8 7.2 83 74-158 39-141 (424)
239 3p6l_A Sugar phosphate isomera 42.3 64 0.0022 26.0 6.8 73 13-86 58-130 (262)
240 4hb7_A Dihydropteroate synthas 42.3 1.5E+02 0.0051 24.7 11.0 77 8-89 20-106 (270)
241 1wyz_A Putative S-adenosylmeth 42.3 47 0.0016 27.0 5.9 54 17-73 70-124 (242)
242 1icp_A OPR1, 12-oxophytodienoa 42.2 55 0.0019 28.7 6.6 83 11-93 153-278 (376)
243 1tv5_A Dhodehase, dihydroorota 42.1 1E+02 0.0035 27.7 8.5 102 14-124 307-429 (443)
244 1vhn_A Putative flavin oxidore 42.1 80 0.0027 26.8 7.6 74 16-91 69-160 (318)
245 4fxs_A Inosine-5'-monophosphat 41.7 2E+02 0.007 26.1 11.3 100 23-127 235-337 (496)
246 2o56_A Putative mandelate race 41.4 1.3E+02 0.0045 26.3 9.2 97 13-129 224-322 (407)
247 1yx1_A Hypothetical protein PA 41.2 73 0.0025 25.8 7.0 51 18-70 84-134 (264)
248 3lmz_A Putative sugar isomeras 40.8 73 0.0025 25.7 6.9 77 14-92 57-133 (257)
249 3eez_A Putative mandelate race 40.5 1.5E+02 0.0051 25.8 9.2 97 12-131 197-295 (378)
250 4as2_A Phosphorylcholine phosp 40.2 37 0.0013 29.3 5.1 56 14-71 104-169 (327)
251 2dsk_A Chitinase; catalytic do 39.7 1.8E+02 0.006 24.8 10.1 104 47-165 62-182 (311)
252 3bo9_A Putative nitroalkan dio 39.6 1E+02 0.0034 26.3 7.8 59 22-91 93-151 (326)
253 3rr1_A GALD, putative D-galact 39.6 1.7E+02 0.0058 25.8 9.5 140 14-156 123-283 (405)
254 3ag6_A Pantothenate synthetase 39.3 99 0.0034 26.0 7.4 133 16-158 7-171 (283)
255 2bdq_A Copper homeostasis prot 39.0 1.4E+02 0.0049 24.0 8.1 66 21-91 136-207 (224)
256 3f4w_A Putative hexulose 6 pho 39.0 1.1E+02 0.0037 23.9 7.5 65 23-91 69-134 (211)
257 3le1_A Phosphotransferase syst 38.9 87 0.003 21.0 6.3 67 44-124 14-85 (88)
258 2zc8_A N-acylamino acid racema 38.9 65 0.0022 27.9 6.6 94 13-127 191-286 (369)
259 1eep_A Inosine 5'-monophosphat 38.9 1.9E+02 0.0067 25.3 9.8 69 20-94 154-225 (404)
260 3r0u_A Enzyme of enolase super 38.8 2E+02 0.0067 25.1 10.3 99 11-129 193-295 (379)
261 3q45_A Mandelate racemase/muco 38.8 1.9E+02 0.0066 25.0 10.9 119 12-153 192-312 (368)
262 3qc0_A Sugar isomerase; TIM ba 38.8 67 0.0023 26.0 6.4 76 17-95 82-179 (275)
263 1tx2_A DHPS, dihydropteroate s 38.7 1.8E+02 0.0061 24.6 12.0 126 8-155 53-197 (297)
264 1uas_A Alpha-galactosidase; TI 38.5 1.9E+02 0.0066 24.9 13.6 110 13-133 21-163 (362)
265 3nd1_A Precorrin-6A synthase/C 38.5 27 0.00091 29.4 3.8 46 27-73 119-165 (275)
266 2poz_A Putative dehydratase; o 38.5 1.4E+02 0.0048 26.0 8.8 97 13-129 208-306 (392)
267 3kwp_A Predicted methyltransfe 38.4 69 0.0024 27.1 6.4 55 16-73 73-129 (296)
268 1i60_A IOLI protein; beta barr 38.2 1.1E+02 0.0037 24.6 7.7 77 17-95 83-176 (278)
269 3mqt_A Mandelate racemase/muco 38.1 1.9E+02 0.0063 25.4 9.5 97 12-128 208-307 (394)
270 3zwt_A Dihydroorotate dehydrog 38.0 1.6E+02 0.0055 25.6 9.0 102 14-124 230-354 (367)
271 1zy9_A Alpha-galactosidase; TM 37.3 2.5E+02 0.0086 26.0 10.6 55 14-70 208-272 (564)
272 3o1n_A 3-dehydroquinate dehydr 37.3 1.8E+02 0.0061 24.2 11.7 133 16-164 50-200 (276)
273 2hzg_A Mandelate racemase/muco 37.2 1.8E+02 0.0063 25.4 9.4 114 16-152 207-322 (401)
274 2og9_A Mandelate racemase/muco 37.1 1.1E+02 0.0038 26.8 7.9 96 12-127 215-312 (393)
275 2fli_A Ribulose-phosphate 3-ep 37.0 1.5E+02 0.0051 23.2 8.2 61 24-90 77-137 (220)
276 3stp_A Galactonate dehydratase 36.8 1.5E+02 0.0052 26.2 8.7 97 12-128 238-336 (412)
277 3tdn_A FLR symmetric alpha-bet 36.8 1E+02 0.0035 24.8 7.2 70 20-91 37-108 (247)
278 2ps2_A Putative mandelate race 36.7 1.6E+02 0.0053 25.5 8.7 96 13-131 199-297 (371)
279 3fst_A 5,10-methylenetetrahydr 36.3 2E+02 0.0067 24.4 13.0 97 75-187 43-142 (304)
280 2z6r_A Diphthine synthase; met 36.2 61 0.0021 26.6 5.7 41 31-73 77-117 (265)
281 1eye_A DHPS 1, dihydropteroate 36.2 1.9E+02 0.0065 24.1 14.7 128 7-155 18-170 (280)
282 3mkc_A Racemase; metabolic pro 36.2 2.2E+02 0.0075 24.9 10.1 97 12-128 213-312 (394)
283 3go2_A Putative L-alanine-DL-g 36.1 1.9E+02 0.0066 25.4 9.3 93 13-128 222-316 (409)
284 3civ_A Endo-beta-1,4-mannanase 36.0 1.6E+02 0.0054 25.4 8.5 50 110-159 53-116 (343)
285 2gl5_A Putative dehydratase pr 35.9 1.5E+02 0.005 26.1 8.5 97 13-129 227-325 (410)
286 3kws_A Putative sugar isomeras 35.5 1.5E+02 0.005 24.2 8.1 77 17-95 103-200 (287)
287 2nql_A AGR_PAT_674P, isomerase 35.4 1E+02 0.0034 27.0 7.3 134 16-155 164-311 (388)
288 3dcp_A Histidinol-phosphatase; 35.4 81 0.0028 26.4 6.4 62 48-117 207-277 (283)
289 3dgb_A Muconate cycloisomerase 35.3 2.2E+02 0.0076 24.7 9.6 98 11-128 201-300 (382)
290 2r8c_A Putative amidohydrolase 35.3 1.4E+02 0.0048 25.9 8.4 70 15-89 172-253 (426)
291 4e4u_A Mandalate racemase/muco 35.2 2.3E+02 0.008 24.9 11.7 98 11-128 208-307 (412)
292 3aty_A Tcoye, prostaglandin F2 35.2 1.5E+02 0.0051 26.0 8.3 84 11-94 159-289 (379)
293 2yl5_A Beta-N-acetylhexosamini 35.0 62 0.0021 29.1 5.9 61 11-73 18-122 (442)
294 1i60_A IOLI protein; beta barr 35.0 1.7E+02 0.0059 23.3 11.4 126 15-150 14-165 (278)
295 2oyc_A PLP phosphatase, pyrido 35.0 34 0.0012 28.6 4.0 70 13-86 7-80 (306)
296 2npn_A Putative cobalamin synt 34.8 47 0.0016 27.1 4.8 42 30-73 101-145 (251)
297 1vp8_A Hypothetical protein AF 34.6 11 0.00036 30.0 0.6 107 9-124 21-140 (201)
298 1hjs_A Beta-1,4-galactanase; 4 34.5 81 0.0028 27.1 6.4 68 55-133 15-82 (332)
299 3sho_A Transcriptional regulat 34.5 1.5E+02 0.0051 22.4 9.2 93 14-127 23-117 (187)
300 2hsa_B 12-oxophytodienoate red 34.4 1.1E+02 0.0038 27.1 7.4 75 14-91 256-348 (402)
301 4h83_A Mandelate racemase/muco 34.3 2.2E+02 0.0074 24.9 9.3 98 12-127 217-315 (388)
302 3toy_A Mandelate racemase/muco 33.9 2.4E+02 0.0081 24.6 10.3 96 12-127 221-318 (383)
303 1gvf_A Tagatose-bisphosphate a 33.9 1.3E+02 0.0043 25.4 7.2 73 14-94 154-235 (286)
304 2qde_A Mandelate racemase/muco 33.9 1.9E+02 0.0066 25.2 9.0 136 15-156 144-294 (397)
305 3l5a_A NADH/flavin oxidoreduct 33.8 1.6E+02 0.0056 26.1 8.4 73 15-91 261-346 (419)
306 3gka_A N-ethylmaleimide reduct 33.7 80 0.0027 27.6 6.2 23 17-39 249-271 (361)
307 2q02_A Putative cytoplasmic pr 33.6 1E+02 0.0036 24.7 6.8 41 21-62 54-100 (272)
308 3jva_A Dipeptide epimerase; en 33.2 1.8E+02 0.006 25.0 8.4 120 12-153 191-312 (354)
309 2e6f_A Dihydroorotate dehydrog 33.2 1.4E+02 0.0046 25.1 7.6 23 16-38 172-195 (314)
310 2vef_A Dihydropteroate synthas 33.0 1.1E+02 0.0038 26.1 6.9 82 8-94 23-114 (314)
311 1bxb_A Xylose isomerase; xylos 32.9 1.6E+02 0.0055 25.5 8.3 135 14-154 32-207 (387)
312 2lqo_A Putative glutaredoxin R 32.8 31 0.001 23.5 2.7 31 31-61 55-85 (92)
313 3ddm_A Putative mandelate race 32.8 2.5E+02 0.0086 24.5 9.8 97 12-128 207-306 (392)
314 3rcn_A Beta-N-acetylhexosamini 32.6 63 0.0021 30.0 5.6 27 12-38 149-175 (543)
315 3sbf_A Mandelate racemase / mu 32.4 2.1E+02 0.0072 25.1 8.9 96 12-127 209-306 (401)
316 2pp0_A L-talarate/galactarate 32.3 1.4E+02 0.0049 26.1 7.8 96 12-127 228-325 (398)
317 3mxt_A Pantothenate synthetase 32.3 1.5E+02 0.0053 24.8 7.4 132 16-158 9-172 (285)
318 3jva_A Dipeptide epimerase; en 32.2 2.1E+02 0.0071 24.6 8.7 135 15-156 138-288 (354)
319 1yht_A DSPB; beta barrel, hydr 32.2 77 0.0026 27.7 5.9 61 11-73 26-122 (367)
320 3i65_A Dihydroorotate dehydrog 32.2 1.2E+02 0.004 27.1 7.1 102 14-124 279-401 (415)
321 1k77_A EC1530, hypothetical pr 32.0 1.3E+02 0.0044 24.0 7.0 78 16-95 83-180 (260)
322 3qc0_A Sugar isomerase; TIM ba 31.7 2E+02 0.0067 23.0 9.9 132 14-156 17-174 (275)
323 3q94_A Fructose-bisphosphate a 31.7 1.6E+02 0.0056 24.7 7.6 73 14-94 158-239 (288)
324 2q02_A Putative cytoplasmic pr 31.7 2E+02 0.0067 23.0 14.1 122 14-150 18-162 (272)
325 2isw_A Putative fructose-1,6-b 31.4 2.5E+02 0.0085 24.1 12.1 137 13-159 24-172 (323)
326 3tj4_A Mandelate racemase; eno 31.2 2.3E+02 0.008 24.4 9.0 97 12-128 205-303 (372)
327 2v5c_A O-GLCNACASE NAGJ; glyco 31.2 1.8E+02 0.006 27.3 8.4 83 12-96 160-270 (594)
328 4b4k_A N5-carboxyaminoimidazol 31.1 1.4E+02 0.0049 23.2 6.5 52 103-156 28-80 (181)
329 1vcv_A Probable deoxyribose-ph 31.1 2.1E+02 0.0071 23.1 10.8 126 12-156 11-144 (226)
330 3kru_A NADH:flavin oxidoreduct 31.0 2E+02 0.0068 24.7 8.3 74 14-91 226-307 (343)
331 3ro6_B Putative chloromuconate 30.9 1E+02 0.0035 26.6 6.5 119 12-153 192-313 (356)
332 3r4e_A Mandelate racemase/muco 30.6 2.6E+02 0.0089 24.7 9.3 98 12-129 228-327 (418)
333 4gxt_A A conserved functionall 30.6 1.3E+02 0.0045 26.3 7.2 65 14-82 173-256 (385)
334 1tzz_A Hypothetical protein L1 30.6 2.7E+02 0.0092 24.2 10.1 137 15-155 164-318 (392)
335 3i6e_A Muconate cycloisomerase 30.5 2.3E+02 0.0079 24.6 8.8 96 12-127 200-297 (385)
336 3elf_A Fructose-bisphosphate a 30.4 1.3E+02 0.0045 26.1 6.9 79 14-94 181-279 (349)
337 1aj0_A DHPS, dihydropteroate s 30.4 2.4E+02 0.0082 23.5 13.4 127 7-155 27-178 (282)
338 3cu2_A Ribulose-5-phosphate 3- 30.3 2E+02 0.0067 23.3 7.7 108 17-146 25-146 (237)
339 2e6f_A Dihydroorotate dehydrog 30.3 70 0.0024 27.0 5.2 76 15-91 103-195 (314)
340 2qq6_A Mandelate racemase/muco 30.2 1.4E+02 0.0048 26.3 7.4 97 13-129 219-317 (410)
341 3n9r_A Fructose-bisphosphate a 30.2 2.5E+02 0.0087 23.8 14.5 137 13-160 23-175 (307)
342 3v3w_A Starvation sensing prot 30.2 2.8E+02 0.0096 24.5 9.4 98 12-129 234-333 (424)
343 1f6y_A 5-methyltetrahydrofolat 30.1 2.3E+02 0.0079 23.3 12.3 123 14-155 21-153 (262)
344 3pm6_A Putative fructose-bisph 29.9 2.6E+02 0.0088 23.8 12.5 132 13-155 33-186 (306)
345 3rr1_A GALD, putative D-galact 29.8 2.6E+02 0.009 24.5 9.1 99 12-130 186-286 (405)
346 1mdl_A Mandelate racemase; iso 29.8 1.7E+02 0.0058 25.1 7.8 136 15-155 143-293 (359)
347 2yl6_A Beta-N-acetylhexosamini 29.7 71 0.0024 28.7 5.3 27 11-37 15-41 (434)
348 4ab4_A Xenobiotic reductase B; 29.7 1.7E+02 0.0058 25.5 7.6 14 48-62 244-257 (362)
349 2yw3_A 4-hydroxy-2-oxoglutarat 29.4 1.9E+02 0.0066 22.7 7.5 68 16-91 23-90 (207)
350 2qw5_A Xylose isomerase-like T 29.3 2.5E+02 0.0086 23.4 11.0 40 22-62 35-80 (335)
351 1j93_A UROD, uroporphyrinogen 29.1 2.7E+02 0.0091 23.7 12.4 61 25-90 200-273 (353)
352 3fcp_A L-Ala-D/L-Glu epimerase 29.1 2.2E+02 0.0075 24.7 8.4 98 11-128 200-299 (381)
353 1gvf_A Tagatose-bisphosphate a 28.9 2.6E+02 0.0088 23.4 14.9 163 13-188 24-201 (286)
354 4dxk_A Mandelate racemase / mu 28.9 2.9E+02 0.01 24.1 10.1 100 12-131 218-319 (400)
355 3bdk_A D-mannonate dehydratase 28.8 2.8E+02 0.0094 24.3 8.9 83 75-164 34-128 (386)
356 3ijd_A Uncharacterized protein 28.7 1.7E+02 0.006 24.9 7.3 118 8-135 20-158 (315)
357 3rcy_A Mandelate racemase/muco 28.6 1.9E+02 0.0066 25.7 8.1 99 12-130 211-311 (433)
358 1vrd_A Inosine-5'-monophosphat 28.5 3.3E+02 0.011 24.5 11.3 71 18-94 236-309 (494)
359 3pdw_A Uncharacterized hydrola 28.5 97 0.0033 24.9 5.7 60 85-155 6-65 (266)
360 2vp8_A Dihydropteroate synthas 28.4 1.5E+02 0.0053 25.3 7.0 125 8-155 55-210 (318)
361 2zds_A Putative DNA-binding pr 28.3 2.6E+02 0.0088 23.2 11.6 46 15-65 15-68 (340)
362 2zds_A Putative DNA-binding pr 28.2 2E+02 0.0068 23.9 7.9 77 17-95 110-212 (340)
363 3u0h_A Xylose isomerase domain 28.1 2.3E+02 0.0079 22.6 8.7 129 20-158 18-178 (281)
364 2gl5_A Putative dehydratase pr 28.1 2.4E+02 0.0081 24.7 8.5 140 12-155 146-322 (410)
365 3ozy_A Putative mandelate race 28.1 3E+02 0.01 23.9 11.9 137 14-156 149-301 (389)
366 3kws_A Putative sugar isomeras 28.0 2.4E+02 0.0082 22.8 13.8 104 20-131 40-166 (287)
367 3my9_A Muconate cycloisomerase 27.8 1.7E+02 0.0059 25.3 7.5 99 12-130 199-299 (377)
368 4dye_A Isomerase; enolase fami 27.8 3.1E+02 0.011 24.0 9.8 98 12-131 220-319 (398)
369 4grd_A N5-CAIR mutase, phospho 27.8 2E+02 0.0068 22.2 6.8 52 103-156 18-70 (173)
370 3ib6_A Uncharacterized protein 27.8 68 0.0023 24.5 4.4 42 42-85 33-76 (189)
371 3dx5_A Uncharacterized protein 27.7 2E+02 0.0068 23.2 7.6 77 17-95 83-174 (286)
372 3r2g_A Inosine 5'-monophosphat 27.7 2.2E+02 0.0077 24.7 8.0 71 18-94 99-172 (361)
373 3obe_A Sugar phosphate isomera 27.3 2.6E+02 0.009 23.1 10.2 101 20-130 38-169 (305)
374 3sjn_A Mandelate racemase/muco 27.2 3E+02 0.01 23.7 9.1 98 12-129 201-301 (374)
375 1k77_A EC1530, hypothetical pr 27.2 2.3E+02 0.008 22.4 8.4 43 15-65 15-57 (260)
376 2ox4_A Putative mandelate race 27.0 1.3E+02 0.0045 26.3 6.7 97 13-129 218-316 (403)
377 1ccw_A Protein (glutamate muta 27.0 73 0.0025 23.3 4.2 70 14-87 40-115 (137)
378 1icp_A OPR1, 12-oxophytodienoa 27.0 65 0.0022 28.3 4.5 25 16-40 254-278 (376)
379 3usb_A Inosine-5'-monophosphat 26.6 3.7E+02 0.013 24.5 10.4 102 21-127 258-362 (511)
380 1tqj_A Ribulose-phosphate 3-ep 26.6 69 0.0024 25.8 4.3 113 23-147 77-192 (230)
381 1now_A Beta-hexosaminidase bet 26.5 1.2E+02 0.004 27.9 6.3 61 11-73 161-247 (507)
382 2gjx_A Beta-hexosaminidase alp 26.5 1.2E+02 0.0041 27.8 6.3 51 11-62 155-230 (507)
383 1wde_A Probable diphthine synt 26.4 41 0.0014 28.3 3.0 42 31-74 83-124 (294)
384 2gmw_A D,D-heptose 1,7-bisphos 26.3 75 0.0026 24.8 4.4 28 43-72 50-77 (211)
385 2y5s_A DHPS, dihydropteroate s 26.3 1.3E+02 0.0044 25.4 6.1 125 8-155 36-186 (294)
386 1wuf_A Hypothetical protein LI 26.2 1.9E+02 0.0067 25.2 7.6 95 13-128 211-307 (393)
387 3pzx_A Formate--tetrahydrofola 26.1 72 0.0025 29.4 4.6 48 109-157 360-407 (557)
388 2fpr_A Histidine biosynthesis 26.1 72 0.0025 24.1 4.2 28 42-71 41-68 (176)
389 1nu5_A Chloromuconate cycloiso 26.1 3E+02 0.01 23.5 8.8 136 16-156 142-293 (370)
390 4fak_A Ribosomal RNA large sub 26.1 41 0.0014 25.8 2.6 38 33-71 76-114 (163)
391 3ugv_A Enolase; enzyme functio 26.0 2.3E+02 0.0078 24.8 8.0 96 12-127 227-324 (390)
392 3qm3_A Fructose-bisphosphate a 26.0 1.9E+02 0.0065 25.2 7.2 79 14-94 194-290 (357)
393 3rys_A Adenosine deaminase 1; 26.0 3.1E+02 0.011 23.5 10.2 74 14-89 145-222 (343)
394 3ngf_A AP endonuclease, family 26.0 2.5E+02 0.0087 22.4 10.1 45 14-66 22-66 (269)
395 1rpx_A Protein (ribulose-phosp 26.0 2.4E+02 0.0083 22.2 9.0 60 23-88 83-144 (230)
396 2nli_A Lactate oxidase; flavoe 25.9 2E+02 0.0068 25.0 7.4 76 16-94 144-260 (368)
397 2epl_X N-acetyl-beta-D-glucosa 25.9 93 0.0032 29.4 5.6 50 13-64 97-161 (627)
398 1v0l_A Endo-1,4-beta-xylanase 25.6 2.9E+02 0.0098 23.3 8.3 73 59-134 12-85 (313)
399 3tcs_A Racemase, putative; PSI 25.4 3.4E+02 0.012 23.7 9.3 99 12-130 207-307 (388)
400 1to0_A Hypothetical UPF0247 pr 25.3 42 0.0014 25.9 2.6 37 34-71 73-110 (167)
401 4hnl_A Mandelate racemase/muco 25.3 3.5E+02 0.012 23.8 9.1 97 12-128 229-327 (421)
402 3cyv_A URO-D, UPD, uroporphyri 25.2 3.2E+02 0.011 23.2 11.3 61 26-90 195-269 (354)
403 3p14_A L-rhamnose isomerase; T 25.2 2.2E+02 0.0076 25.4 7.5 97 9-122 68-177 (424)
404 2qgy_A Enolase from the enviro 25.1 3.4E+02 0.012 23.5 10.9 135 15-155 148-298 (391)
405 3noy_A 4-hydroxy-3-methylbut-2 24.8 3.5E+02 0.012 23.6 12.3 153 27-189 101-296 (366)
406 3vcn_A Mannonate dehydratase; 24.8 3.1E+02 0.011 24.2 8.7 95 13-127 236-332 (425)
407 3a21_A Putative secreted alpha 24.8 3.5E+02 0.012 25.2 9.4 79 13-93 24-144 (614)
408 3qgm_A P-nitrophenyl phosphata 24.8 1.3E+02 0.0045 24.0 5.8 60 85-155 8-67 (268)
409 3epr_A Hydrolase, haloacid deh 24.6 1.3E+02 0.0046 24.0 5.9 60 85-155 5-64 (264)
410 3t6c_A RSPA, putative MAND fam 24.6 3E+02 0.01 24.5 8.6 95 13-127 249-345 (440)
411 2poz_A Putative dehydratase; o 24.6 3.4E+02 0.012 23.5 9.0 138 14-155 135-303 (392)
412 1vhv_A Diphthine synthase; str 24.4 1.5E+02 0.0052 24.3 6.2 48 22-73 80-127 (268)
413 2nzl_A Hydroxyacid oxidase 1; 24.4 2.3E+02 0.0078 24.9 7.6 43 49-94 241-283 (392)
414 1h4p_A Glucan 1,3-beta-glucosi 24.4 1.5E+02 0.0052 26.1 6.5 61 74-135 76-138 (408)
415 3tji_A Mandelate racemase/muco 24.4 3.7E+02 0.013 23.7 9.1 96 12-127 230-327 (422)
416 1h5y_A HISF; histidine biosynt 24.4 1.8E+02 0.0062 23.0 6.6 70 19-91 34-106 (253)
417 1vjz_A Endoglucanase; TM1752, 24.3 1.4E+02 0.0049 25.2 6.2 61 74-135 39-101 (341)
418 1thf_D HISF protein; thermophI 24.3 2.6E+02 0.0089 22.2 7.6 70 19-91 31-103 (253)
419 2x7v_A Probable endonuclease 4 24.3 2.8E+02 0.0095 22.3 9.7 124 20-150 14-168 (287)
420 2rdx_A Mandelate racemase/muco 24.1 3.4E+02 0.012 23.3 11.4 134 15-157 144-292 (379)
421 2wm8_A MDP-1, magnesium-depend 24.1 1.1E+02 0.0038 23.1 5.0 27 43-71 68-94 (187)
422 1pch_A Phosphocarrier protein; 24.0 1.7E+02 0.0057 19.6 6.0 64 44-121 13-81 (88)
423 3l23_A Sugar phosphate isomera 23.9 3.1E+02 0.01 22.6 9.6 49 109-158 107-164 (303)
424 1ka9_F Imidazole glycerol phos 23.8 2E+02 0.007 22.9 6.8 71 19-91 32-104 (252)
425 1rvk_A Isomerase/lactonizing e 23.6 3.5E+02 0.012 23.2 11.5 98 13-130 209-309 (382)
426 3gh5_A HEX1, beta-hexosaminida 23.6 1.4E+02 0.0049 27.4 6.3 59 12-72 193-282 (525)
427 3rcy_A Mandelate racemase/muco 23.5 3.1E+02 0.01 24.4 8.4 138 15-156 145-308 (433)
428 4d9a_A 2-pyrone-4,6-dicarbaxyl 23.5 3.2E+02 0.011 22.7 9.9 124 14-157 53-177 (303)
429 1xim_A D-xylose isomerase; iso 23.4 2.6E+02 0.0089 24.2 7.9 135 13-154 31-207 (393)
430 2qdd_A Mandelate racemase/muco 23.3 2.4E+02 0.0084 24.3 7.6 94 12-129 198-293 (378)
431 3lab_A Putative KDPG (2-keto-3 23.3 2.9E+02 0.0099 22.1 8.7 70 14-92 21-92 (217)
432 4e5t_A Mandelate racemase / mu 23.2 3.8E+02 0.013 23.4 10.7 96 12-127 216-313 (404)
433 3l23_A Sugar phosphate isomera 23.2 3.2E+02 0.011 22.5 11.5 101 20-130 31-165 (303)
434 3civ_A Endo-beta-1,4-mannanase 23.1 71 0.0024 27.6 3.9 53 12-66 47-115 (343)
435 1kkl_H Phosphocarrier protein 23.1 1.9E+02 0.0065 19.9 7.1 67 44-124 26-98 (100)
436 1jak_A Beta-N-acetylhexosamini 23.0 1.4E+02 0.0048 27.4 6.1 58 12-71 168-256 (512)
437 3vnd_A TSA, tryptophan synthas 23.0 3.2E+02 0.011 22.5 15.0 152 13-187 27-204 (267)
438 2v5d_A O-GLCNACASE NAGJ; famil 22.9 2.3E+02 0.0079 27.3 7.9 83 12-96 160-270 (737)
439 3epr_A Hydrolase, haloacid deh 22.8 1E+02 0.0035 24.8 4.8 39 46-86 24-64 (264)
440 1nq6_A XYS1; glycoside hydrola 22.8 3.3E+02 0.011 22.6 8.2 73 59-134 11-84 (302)
441 3c8f_A Pyruvate formate-lyase 22.7 2.7E+02 0.0093 21.6 10.4 105 8-124 75-192 (245)
442 2jg1_A Tagatose-6-phosphate ki 22.7 3.4E+02 0.011 22.7 9.7 101 13-124 127-236 (330)
443 1rd5_A Tryptophan synthase alp 22.6 3.1E+02 0.01 22.2 12.7 117 14-149 28-166 (262)
444 2ekc_A AQ_1548, tryptophan syn 22.6 3.1E+02 0.011 22.3 13.0 65 64-129 20-99 (262)
445 3mwc_A Mandelate racemase/muco 22.5 3.1E+02 0.011 24.0 8.2 96 12-128 213-310 (400)
446 2qv5_A AGR_C_5032P, uncharacte 22.5 3.3E+02 0.011 22.4 12.0 122 14-152 106-234 (261)
447 2cho_A Glucosaminidase, hexosa 22.4 4E+02 0.014 25.6 9.3 81 13-95 139-244 (716)
448 3k30_A Histamine dehydrogenase 22.3 2.1E+02 0.0073 27.0 7.5 74 14-91 240-324 (690)
449 4gxw_A Adenosine deaminase; am 22.1 3.9E+02 0.013 23.3 8.6 73 75-152 100-177 (380)
450 2xn2_A Alpha-galactosidase; hy 22.1 2.4E+02 0.0081 27.2 7.7 56 14-71 346-419 (732)
451 1y0e_A Putative N-acetylmannos 22.0 2.8E+02 0.0097 21.5 9.0 115 24-156 81-200 (223)
452 2pr7_A Haloacid dehalogenase/e 21.9 48 0.0016 23.2 2.3 48 42-91 17-67 (137)
453 4awe_A Endo-beta-D-1,4-mannana 21.9 1.3E+02 0.0044 25.0 5.4 25 14-38 33-57 (387)
454 4hpn_A Putative uncharacterize 21.9 3.8E+02 0.013 23.0 9.7 96 12-127 196-293 (378)
455 3ayv_A Putative uncharacterize 21.8 1.8E+02 0.0061 23.1 6.1 76 17-95 75-164 (254)
456 1ujp_A Tryptophan synthase alp 21.6 3.4E+02 0.012 22.3 12.1 115 15-148 27-166 (271)
457 3ocu_A Lipoprotein E; hydrolas 21.5 1.8E+02 0.0061 24.1 5.9 45 40-86 98-145 (262)
458 3kc2_A Uncharacterized protein 21.3 51 0.0017 28.6 2.7 45 37-85 25-72 (352)
459 3cqj_A L-ribulose-5-phosphate 21.3 3.3E+02 0.011 22.0 13.3 127 14-150 29-187 (295)
460 4hty_A Cellulase; (alpha/beta) 21.3 1.2E+02 0.0042 26.0 5.2 55 74-132 88-142 (359)
461 3vk5_A MOEO5; TIM barrel, tran 21.2 3.7E+02 0.013 22.5 7.9 72 16-92 184-257 (286)
462 1ht6_A AMY1, alpha-amylase iso 21.1 1.9E+02 0.0064 25.3 6.4 60 74-134 24-92 (405)
463 1yqh_A DUF77, IG hypothetical 21.1 2.1E+02 0.0073 20.1 5.5 55 38-94 17-82 (109)
464 2o9p_A Beta-glucosidase B; fam 20.9 1.8E+02 0.0062 26.2 6.3 54 74-131 70-126 (454)
465 2qw5_A Xylose isomerase-like T 20.9 3.6E+02 0.012 22.4 10.1 91 60-157 8-126 (335)
466 1fob_A Beta-1,4-galactanase; B 20.9 1.8E+02 0.0063 24.7 6.2 64 60-133 19-82 (334)
467 1szn_A Alpha-galactosidase; (b 20.9 4.3E+02 0.015 23.3 9.5 80 13-94 24-135 (417)
468 4h3d_A 3-dehydroquinate dehydr 20.9 3.4E+02 0.012 22.1 12.8 133 16-164 30-180 (258)
469 2d1z_A Endo-1,4-beta-D-xylanas 20.9 3.5E+02 0.012 23.8 8.3 73 59-134 12-85 (436)
470 2fli_A Ribulose-phosphate 3-ep 20.8 3E+02 0.01 21.3 10.5 77 15-94 13-94 (220)
471 1dos_A Aldolase class II; lyas 20.8 1.3E+02 0.0045 26.2 5.1 79 14-94 196-291 (358)
472 1geq_A Tryptophan synthase alp 20.8 3.2E+02 0.011 21.7 13.7 115 14-147 15-154 (248)
473 2jxf_A NS4B(40-69), genome pol 20.7 79 0.0027 16.5 2.2 15 262-276 5-19 (30)
474 3dg3_A Muconate cycloisomerase 20.5 4.1E+02 0.014 22.8 8.7 97 12-129 193-291 (367)
475 1y51_A Phosphocarrier protein 20.4 2E+02 0.0068 19.1 7.1 61 48-122 19-83 (88)
476 3gd6_A Muconate cycloisomerase 20.3 4.2E+02 0.015 22.9 10.8 97 12-130 195-295 (391)
477 3ahx_A Beta-glucosidase A; cel 20.3 2.4E+02 0.0081 25.4 6.9 55 74-131 62-119 (453)
478 3lrk_A Alpha-galactosidase 1; 20.3 4E+02 0.014 24.2 8.3 79 14-94 43-152 (479)
479 3cui_A EXO-beta-1,4-glucanase; 20.3 3.1E+02 0.011 22.9 7.5 73 59-134 11-84 (315)
480 2v82_A 2-dehydro-3-deoxy-6-pho 20.2 3E+02 0.01 21.2 8.6 71 14-89 15-85 (212)
481 3cwo_X Beta/alpha-barrel prote 20.0 3E+02 0.01 21.1 7.6 96 21-130 133-230 (237)
No 1
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=100.00 E-value=2.3e-46 Score=336.80 Aligned_cols=292 Identities=33% Similarity=0.583 Sum_probs=245.1
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcC
Q 022377 5 GVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESG 84 (298)
Q Consensus 5 ~~~~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~ 84 (298)
+.++.++...|+.|++.++++.+.+.|+..|.|+|||||+++++.++++++++..++..+.++|||+++++.++.|+++|
T Consensus 40 ~~~~~~~~~~ls~e~i~~~i~~~~~~g~~~i~~tGGEPll~~~l~~li~~~~~~~~~~~i~i~TNG~ll~~~~~~L~~~g 119 (340)
T 1tv8_A 40 DFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAG 119 (340)
T ss_dssp TCCCCCGGGSCCHHHHHHHHHHHHHTTCCEEEEESSCGGGSTTHHHHHHHHTTCTTCCEEEEEECSTTHHHHHHHHHHHT
T ss_pred CcccCCccCCCCHHHHHHHHHHHHHCCCCEEEEeCCCccchhhHHHHHHHHHhCCCCCeEEEEeCccchHHHHHHHHHCC
Confidence 34455667789999999999999999999999999999999999999999998634435999999999988999999999
Q ss_pred CCeEEEecCCCCHHhhhhhcCCC-cHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCeeEEEeeec
Q 022377 85 LTSVNISLDTLVPAKFEFLTRRK-GHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFIEFMP 163 (298)
Q Consensus 85 ~~~v~iSldg~~~~~~~~ir~~~-~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~~~~~~~~p 163 (298)
++.|+|||||.+++.|+.+++.+ +|++++++|+.++++|+ ++.+++|++++.|.+++.++++++.++|++++++.++|
T Consensus 120 ~~~v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~-~v~i~~vv~~g~n~~ei~~~~~~~~~~g~~~~~i~~~p 198 (340)
T 1tv8_A 120 LRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGL-NVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMD 198 (340)
T ss_dssp CCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTC-EEEEEEEECTTTTGGGHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCEEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCC-CEEEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEeeE
Confidence 99999999999999999999988 89999999999999999 99999999998899999999999999999999999999
Q ss_pred CCCC-CCcccCCCCHHHHHHHHHHhCCCceec-CCCCCCCcceEEeCCCCeeEEEEeCCCccccCCCCeEEEecccceee
Q 022377 164 FDGN-VWNVKKLVPYAEMLDTVVKKFPGLRRM-QDHPTETAKNFKIDGHHGNVSFITSMTEHFCAGCNRLRLLADGNFKV 241 (298)
Q Consensus 164 ~~~~-~~~~~~~~~~~e~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~I~~dG~v~p 241 (298)
.+.. .|.....++.+++++.+.+.+. +... ......+..+|.+++..+.++++.+....+|++|++++|+|||+|+|
T Consensus 199 ~~~~~~~~~~~~~~~~e~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~C~~c~~~~i~~dG~v~p 277 (340)
T 1tv8_A 199 VGNDNGWDFSKVVTKDEMLTMIEQHFE-IDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYG 277 (340)
T ss_dssp BCSSSSBCCSSCCCHHHHHHHHHHHSC-EEEECCSSTTCSSEEEEETTTCCEEEEECTTTSCCGGGCCEEEECTTSCEES
T ss_pred cCCCccchhhcCCCHHHHHHHHHhhCC-ccccccCCCCCCCeEEEECCCCeEEEEECCCCCccccCCCcEEECCCccEEe
Confidence 8764 4665667889999999998884 3322 22233456778888777789999998889998899999999999999
Q ss_pred cCCCC-CCCCcchHhhcCCCHHHHHHHHHHHHHhhhhhccCccccc-----cccccccccccC
Q 022377 242 CLFGP-SEVSLRDPLRQNASDDELREIIGAAVKRKKAAHAGMFDIA-----KTANRPMIHIGG 298 (298)
Q Consensus 242 C~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 298 (298)
|.+.. .+++|++++++|.+++.+.++|++++++||+.|++.-... ....|.|+.|||
T Consensus 278 C~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~m~~igg 340 (340)
T 1tv8_A 278 CLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQRKKINMNYIGG 340 (340)
T ss_dssp SSCCSSCCCCHHHHHHTCCCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHTC-----------
T ss_pred CCCCCCCCcchHHHHhCCCCHHHHHHHHHHHHHhCchhcCcccccccccccCCCccccccCCC
Confidence 99998 8999999999999999999999999999999998532100 123689999998
No 2
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.89 E-value=5e-22 Score=162.43 Aligned_cols=132 Identities=14% Similarity=0.229 Sum_probs=113.5
Q ss_pred CEEEEcCCccCccccHH-HHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHH
Q 022377 33 DKIRLTGGEPTVRKDIE-EACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEK 111 (298)
Q Consensus 33 ~~v~~tGGEPll~~~~~-~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~ 111 (298)
..|.|+|||||+++++. ++++++++. ++. +.++|||++.++.++.+.+. ++.|.||+|+++++.|+++|+. ++++
T Consensus 5 ~~v~~tGGEPll~~~~~~~l~~~~~~~-g~~-~~l~TNG~l~~~~~~~l~~~-~d~v~isld~~~~~~~~~~~g~-~~~~ 80 (182)
T 3can_A 5 GGVTFCGGEPLLHPEFLIDILKRCGQQ-GIH-RAVDTTLLARKETVDEVMRN-CELLLIDLKSMDSTVHQTFCDV-PNEL 80 (182)
T ss_dssp CCEEECSSTGGGSHHHHHHHHHHHHHT-TCC-EEEECTTCCCHHHHHHHHHT-CSEEEEECCCSCHHHHHHHHSS-CSHH
T ss_pred CEEEEEcccccCCHHHHHHHHHHHHHC-CCc-EEEECCCCCCHHHHHHHHhh-CCEEEEECCCCCHHHHHHHhCC-CHHH
Confidence 57999999999999985 999999984 895 99999999767788899886 8999999999999999999985 4799
Q ss_pred HHHHHHHHHHcCCCCEEEEEEEecCC--CHhHHHHHHHHHhhC-CC--eeEEEeeecCCCCCC
Q 022377 112 VMESINAAIEVGYNPVKVNCVVMRGF--NDDEICDFVELTRDR-PI--NIRFIEFMPFDGNVW 169 (298)
Q Consensus 112 v~~~i~~l~~~g~~~v~i~~vi~~~~--n~~~i~~i~~~~~~~-g~--~~~~~~~~p~~~~~~ 169 (298)
++++|+.+.+.|+ ++.++++++++. |.+++.++++++.++ |+ .+.+..+.|.+...|
T Consensus 81 i~~~i~~l~~~g~-~v~i~~~v~~~~n~n~~~~~~~~~~~~~~~g~~~~~~l~~~~p~g~~~~ 142 (182)
T 3can_A 81 ILKNIRRVAEADF-PYYIRIPLIEGVNADEKNIKLSAEFLASLPRHPEIINLLPYHDIGKGKH 142 (182)
T ss_dssp HHHHHHHHHHTTC-CEEEEEEECBTTTCSHHHHHHHHHHHHHSSSCCSEEEEEECCC------
T ss_pred HHHHHHHHHhCCC-eEEEEEEEECCCCCCHHHHHHHHHHHHhCcCccceEEEecCcccCHHHH
Confidence 9999999999999 999999999875 468999999999998 85 678888899886655
No 3
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=99.84 E-value=4.4e-20 Score=157.35 Aligned_cols=150 Identities=17% Similarity=0.256 Sum_probs=126.6
Q ss_pred CCCCCCHHHHHHHHHHHHhC---CCCEEEEcCCccCccccH-HHHHHHHhccCCCCcEEEEeCccc--hHhhHHHHHHcC
Q 022377 11 KPQLLSLNEILRLAYLFVTS---GVDKIRLTGGEPTVRKDI-EEACFHLSKLKGLKTLAMTTNGLT--LARKLPKLKESG 84 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~---~~~~v~~tGGEPll~~~~-~~ii~~~~~~~~~~~v~i~TNG~l--l~~~~~~l~~~~ 84 (298)
....++.+++.+.++++... ++..|.|+||||++++++ .++++++++. ++. +.++|||++ ..+.++.+.+.
T Consensus 46 ~~~~~~~~~i~~~i~~~~~~~~~~~~~i~~~GGEP~l~~~~l~~l~~~~~~~-~~~-i~i~Tng~~~~~~~~~~~l~~~- 122 (245)
T 3c8f_A 46 GGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKE-GIH-TCLDTNGFVRRYDPVIDELLEV- 122 (245)
T ss_dssp CSEEECHHHHHHHHGGGHHHHTSTTCEEEEEESCGGGGHHHHHHHHHHHHTT-TCC-EEEEECCCCCCCCHHHHHHHHT-
T ss_pred cCccCCHHHHHHHHHHhhhhhcCCCCeEEEECCCcCCCHHHHHHHHHHHHHc-CCc-EEEEeCCCcCcCHHHHHHHHHh-
Confidence 35578999999888876653 468999999999999995 6999999985 885 999999988 66788888886
Q ss_pred CCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCC--HhHHHHHHHHHhhCCC--eeEEEe
Q 022377 85 LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFN--DDEICDFVELTRDRPI--NIRFIE 160 (298)
Q Consensus 85 ~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n--~~~i~~i~~~~~~~g~--~~~~~~ 160 (298)
++.|.||+|+.+++.|+++++. ++++++++++.++++|+ ++.+++++++|.| .+++.++++++.++|. .+.+..
T Consensus 123 ~~~v~isld~~~~~~~~~~~~~-~~~~~~~~i~~l~~~g~-~v~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (245)
T 3c8f_A 123 TDLVMLDLKQMNDEIHQNLVGV-SNHRTLEFAKYLANKNV-KVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLP 200 (245)
T ss_dssp CSEEEEECCCSSHHHHHHHHSS-CSHHHHHHHHHHHHHTC-CEEEEEEECTTTTCCHHHHHHHHHHHHHHCCEEEEEEEE
T ss_pred CCEEEEeCCCCCHHHhhhccCC-CHHHHHHHHHHHHhcCC-EEEEEEeecCCCCCCHHHHHHHHHHHHhcCCCceeEEEe
Confidence 8999999999999999999985 47999999999999999 9999999998754 4899999999999885 334444
Q ss_pred eecCC
Q 022377 161 FMPFD 165 (298)
Q Consensus 161 ~~p~~ 165 (298)
+.|.+
T Consensus 201 ~~~~~ 205 (245)
T 3c8f_A 201 YHELG 205 (245)
T ss_dssp CCCCS
T ss_pred ccccC
Confidence 44443
No 4
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=99.82 E-value=5.4e-19 Score=158.46 Aligned_cols=171 Identities=11% Similarity=0.122 Sum_probs=132.4
Q ss_pred CCCCCCHHHHHHHHHHHHh--------------------CCCCEEEEc-CCccCccccHHHHHHHHhccCCCCcEEEEeC
Q 022377 11 KPQLLSLNEILRLAYLFVT--------------------SGVDKIRLT-GGEPTVRKDIEEACFHLSKLKGLKTLAMTTN 69 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~--------------------~~~~~v~~t-GGEPll~~~~~~ii~~~~~~~~~~~v~i~TN 69 (298)
....++.+++...+.+... ..+..|.|+ |||||+++++.++++++++. ++. +.++||
T Consensus 101 ~~~~~~~eei~~~i~~~~~~~~~~~~g~~~v~~~~~~e~~~~~~v~~sggGEPll~~~l~~ll~~~~~~-g~~-i~l~TN 178 (342)
T 2yx0_A 101 PQPWDDPAFIVEESIKAQRKLLIGYKGNPKVDKKKFEEAWNPTHAAISLSGEPMLYPYMGDLVEEFHKR-GFT-TFIVTN 178 (342)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHTTCC--CCSCHHHHHHHTSCCEEEECSSSCGGGSTTHHHHHHHHHHT-TCE-EEEEEC
T ss_pred ccCcCCHHHHHHHHHHHHHHHhhccCCCcccchhhhhhccCCCEEEEcCCCcccchhhHHHHHHHHHHC-CCc-EEEEcC
Confidence 3456888887654443321 124679997 99999999999999999985 884 999999
Q ss_pred ccchHhhHHHHHHcC--CCeEEEecCCCCHHhhhhhcC---CCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHH
Q 022377 70 GLTLARKLPKLKESG--LTSVNISLDTLVPAKFEFLTR---RKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICD 144 (298)
Q Consensus 70 G~ll~~~~~~l~~~~--~~~v~iSldg~~~~~~~~ir~---~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~ 144 (298)
|++ ++.++.|.++| ++.+.||||+++++.|+.+++ .++|++++++++.+++.|+ ++.+++++.+|.|++++.+
T Consensus 179 G~~-~e~l~~L~~~g~~~~~l~isld~~~~e~~~~i~~~~~~~~~~~~~~~i~~l~~~g~-~v~i~~~l~~g~n~~~~~~ 256 (342)
T 2yx0_A 179 GTI-PERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERILRFLELMRDLPT-RTVVRLTLVKGENMHSPEK 256 (342)
T ss_dssp SCC-HHHHHHHHHTTCCCSEEEEEECCSSHHHHHHHHCBSSSCHHHHHHHHHHHHTTCSS-EEEEEEEECTTTTCCCHHH
T ss_pred CCc-HHHHHHHHhcCCCCCEEEEEccCCCHHHHHHHhCCCcccHHHHHHHHHHHHHhCCC-CEEEEEEEECCccHHHHHH
Confidence 988 77899999876 999999999999999999997 3469999999999999999 9999999999899999999
Q ss_pred HHHHHhhCCC-eeEEEeeecCCCCC--CcccCCCCHHHHHHHHH
Q 022377 145 FVELTRDRPI-NIRFIEFMPFDGNV--WNVKKLVPYAEMLDTVV 185 (298)
Q Consensus 145 i~~~~~~~g~-~~~~~~~~p~~~~~--~~~~~~~~~~e~~~~i~ 185 (298)
+++++.++|+ .+.+..|.|.+... .......+.+++.+...
T Consensus 257 l~~~l~~~~~~~i~l~~~~~~~~~~~~l~~~~~~~~e~~~~~~~ 300 (342)
T 2yx0_A 257 YAKLILKARPMFVEAKAYMFVGYSRNRLTINNMPSHQDIREFAE 300 (342)
T ss_dssp HHHHHHHHCCSEEEEEECC------CCCCGGGSCCHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEeeeecCCCcccccccCCCCHHHHHHHHH
Confidence 9999999887 45555676654332 21223445555554443
No 5
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=99.81 E-value=2.9e-19 Score=158.13 Aligned_cols=167 Identities=19% Similarity=0.294 Sum_probs=124.1
Q ss_pred CCCCCCHHHHHHHHHHHHh---------------------CCCCEEEEc-CCccCccccHHHHHHHHhccCCCCcEEEEe
Q 022377 11 KPQLLSLNEILRLAYLFVT---------------------SGVDKIRLT-GGEPTVRKDIEEACFHLSKLKGLKTLAMTT 68 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~---------------------~~~~~v~~t-GGEPll~~~~~~ii~~~~~~~~~~~v~i~T 68 (298)
....++.+++...+.+..+ ..+..|.|+ |||||+++++.++++++++. ++. +.++|
T Consensus 86 ~~~~~~~eei~~~~~~~~~~~~~~~~g~~~v~~~~r~~~~~~~~~i~~s~gGEPll~~~l~~li~~~~~~-g~~-~~l~T 163 (311)
T 2z2u_A 86 EPKWEEPEVVYEKILAMHKRIIMGYAGVLDRVGEKKFKEALEPKHVAISLSGEPTLYPYLDELIKIFHKN-GFT-TFVVS 163 (311)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHGGGGGHHHHCHHHHHHHTSCCEEEECSSSCGGGSTTHHHHHHHHHHT-TCE-EEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHHhhccCCCcCcchhhhhhhccCCCEEEEeCCcCccchhhHHHHHHHHHHC-CCc-EEEEC
Confidence 3467999998764433311 124679999 89999999999999999995 884 99999
Q ss_pred CccchHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCC--CcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHH
Q 022377 69 NGLTLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRR--KGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFV 146 (298)
Q Consensus 69 NG~ll~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~--~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~ 146 (298)
||++ ++.++.| +.+.+.||||+.+++.|+.+++. ++|++++++++.+++.| ++.+++++++|.|. ++.+++
T Consensus 164 NG~~-~~~l~~L---~~~~v~isld~~~~~~~~~i~~~~~~~~~~v~~~i~~l~~~g--~v~i~~~~~~g~n~-~~~~~~ 236 (311)
T 2z2u_A 164 NGIL-TDVIEKI---EPTQLYISLDAYDLDSYRRICGGKKEYWESILNTLDILKEKK--RTCIRTTLIRGYND-DILKFV 236 (311)
T ss_dssp CSCC-HHHHHHC---CCSEEEEECCCSSTTTC----CCCHHHHHHHHHHHHHHTTSS--SEEEEEEECTTTTC-CGGGTH
T ss_pred CCCC-HHHHHhC---CCCEEEEEeecCCHHHHHHHhCCccchHHHHHHHHHHHHhcC--CEEEEEEEECCcch-hHHHHH
Confidence 9987 4555555 78999999999999999999987 56999999999999987 68999999998898 999999
Q ss_pred HHHhhCCCe-eEEEeeecCCCCC--CcccCCCCHHHHHHHHHH
Q 022377 147 ELTRDRPIN-IRFIEFMPFDGNV--WNVKKLVPYAEMLDTVVK 186 (298)
Q Consensus 147 ~~~~~~g~~-~~~~~~~p~~~~~--~~~~~~~~~~e~~~~i~~ 186 (298)
+++.++|++ +.+..|+|.+... +......+.+++.+.+..
T Consensus 237 ~~~~~~~~~~i~l~~~~p~g~~~~~~~~~~~~~~~e~~~~~~~ 279 (311)
T 2z2u_A 237 ELYERADVHFIELKSYMHVGYSQKRLKKEDMLQHDEILKLAKM 279 (311)
T ss_dssp HHHHHHTCSEEEEEECC------------CCCCHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEeeEEccccccccccccCCCHHHHHHHHHH
Confidence 999998874 5667788876554 332345667776665544
No 6
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=99.79 E-value=4.3e-18 Score=156.07 Aligned_cols=212 Identities=13% Similarity=0.138 Sum_probs=150.1
Q ss_pred CCCCCHHHHHHHHHHHHh-CCCCEEEEcCCccCcccc--HHHHHHHHhccCCCCcEEEEeCc-c----ch-HhhHHHHHH
Q 022377 12 PQLLSLNEILRLAYLFVT-SGVDKIRLTGGEPTVRKD--IEEACFHLSKLKGLKTLAMTTNG-L----TL-ARKLPKLKE 82 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~-~~~~~v~~tGGEPll~~~--~~~ii~~~~~~~~~~~v~i~TNG-~----ll-~~~~~~l~~ 82 (298)
...|+.+++.++++.+.+ .++..|.|+|||||++++ +.++++++++..++..+.+.||| . ++ ++.++.|.+
T Consensus 142 ~~~ls~eei~~~i~~i~~~~gi~~V~ltGGEPll~~d~~L~~il~~l~~~~~v~~i~i~Tng~~~~p~~it~e~l~~L~~ 221 (416)
T 2a5h_A 142 DDSMPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRIGSRTPVVLPQRITPELVNMLKK 221 (416)
T ss_dssp SSBCCHHHHHHHHHHHHTCTTCCEEEEEESCTTSSCHHHHHHHHHHHHTSTTCCEEEEECSHHHHCGGGCCHHHHHHHGG
T ss_pred cCCCCHHHHHHHHHHHHhcCCCcEEEEECCCCCCCCHHHHHHHHHHHHhcCCccEEEEEecccccccccCCHHHHHHHHh
Confidence 357999999999999988 688999999999999998 88999999986566568999999 2 33 567888887
Q ss_pred cCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHh--HHHHHHHHHhhCCCeeEEEe
Q 022377 83 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDD--EICDFVELTRDRPINIRFIE 160 (298)
Q Consensus 83 ~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~--~i~~i~~~~~~~g~~~~~~~ 160 (298)
+ +.+.||+|+.++. .++ +.++++++.++++|+ .+.+++|+++|.|++ ++.++++++.++|+...++.
T Consensus 222 ~--~~v~Isl~~~~~~---ei~-----~~v~~ai~~L~~aGi-~v~i~~vll~GvNd~~e~l~~l~~~l~~lgv~~~~i~ 290 (416)
T 2a5h_A 222 Y--HPVWLNTHFNHPN---EIT-----EESTRACQLLADAGV-PLGNQSVLLRGVNDCVHVMKELVNKLVKIRVRPYYIY 290 (416)
T ss_dssp G--CSEEEEECCCSGG---GCC-----HHHHHHHHHHHHTTC-CEEEEEECCTTTTCSHHHHHHHHHHHHHTTEEEEEEE
T ss_pred c--CcEEEEEecCCHH---HHh-----HHHHHHHHHHHHcCC-EEEEEEEEECCCCCCHHHHHHHHHHHHHcCCceEEEe
Confidence 6 7799999986652 333 899999999999999 999999999988865 49999999999999877788
Q ss_pred eecCCC-CCCcccCCCCHHHHHHHHHHhCCCceecCCCCCCCcceEEeCCCCeeEEEEeCCCcccc-CCCCe-EEEeccc
Q 022377 161 FMPFDG-NVWNVKKLVPYAEMLDTVVKKFPGLRRMQDHPTETAKNFKIDGHHGNVSFITSMTEHFC-AGCNR-LRLLADG 237 (298)
Q Consensus 161 ~~p~~~-~~~~~~~~~~~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C-~~~~~-~~I~~dG 237 (298)
++|.+. ..+.. .+..+..+.+.+....+... ..+......++..+.+.+. ....| .+++. +.-++.|
T Consensus 291 ~~~~~~g~~~~~---~~~~~~~eil~~l~~~~~G~----~~p~~v~~~pgg~gk~~~~---p~y~~~~~~~~~~~~~~~g 360 (416)
T 2a5h_A 291 QCDLSLGLEHFR---TPVSKGIEIIEGLRGHTSGY----CVPTFVVDAPGGGGKTPVM---PNYVISQSHDKVILRNFEG 360 (416)
T ss_dssp CCCCBTTCGGGC---CCHHHHHHHHHTTBTTBCGG----GCCEEEEEETTTTEEEECC---CCCEEEEETTEEEEECTTC
T ss_pred ecCCCCCccccc---CCcccHHHHHHHHHHHCCCC----CCceEEEECCCCCCceeec---hhheeccCCCEEEEEcCCC
Confidence 887643 33322 34444444443322111111 0122233455444443321 11223 23343 5578999
Q ss_pred ceeecCC
Q 022377 238 NFKVCLF 244 (298)
Q Consensus 238 ~v~pC~~ 244 (298)
.++.|..
T Consensus 361 ~~~~~~~ 367 (416)
T 2a5h_A 361 VITTYSE 367 (416)
T ss_dssp CEEEEEC
T ss_pred CEEEccC
Confidence 9999965
No 7
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=99.75 E-value=4.8e-17 Score=147.17 Aligned_cols=156 Identities=19% Similarity=0.312 Sum_probs=124.7
Q ss_pred CCCCCHHHHHHHHHHHHh----------CCCCEEEEc-CCccCcccc-HHHHHHHHhccCCC-----CcEEEEeCccchH
Q 022377 12 PQLLSLNEILRLAYLFVT----------SGVDKIRLT-GGEPTVRKD-IEEACFHLSKLKGL-----KTLAMTTNGLTLA 74 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~----------~~~~~v~~t-GGEPll~~~-~~~ii~~~~~~~~~-----~~v~i~TNG~ll~ 74 (298)
...|+.+|+...+..+.. .++..|.|+ |||||++++ +.++++.+++..|+ . +.++|||++
T Consensus 140 ~r~Lt~eEIv~qv~~~~~~~~~~g~~gg~~i~~Ivf~GgGEPLln~d~v~~~i~~lk~~~Gl~~s~r~-itlsTnG~~-- 216 (404)
T 3rfa_A 140 NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRR-VTLSTSGVV-- 216 (404)
T ss_dssp EEECCHHHHHHHHHHHHHHHCCHHHHSSCSCSEEEECSSSCGGGCHHHHHHHHHHHHSTTTTCCCGGG-EEEEESCCH--
T ss_pred CCcCCHHHHHHHHHHHHHHhhhcccccCCCccEEEEeCCCCcccCHHHHHHHHHHHHhhcCcCcCCCc-eEEECCCcH--
Confidence 457999998876655433 246789999 699999976 67999999884477 5 999999976
Q ss_pred hhHHHHHHcCCCeEEEecCCCCHHhhhhhcC---CCcHHHHHHHHHHHH-HcCC--CCEEEEEEEecCCCH--hHHHHHH
Q 022377 75 RKLPKLKESGLTSVNISLDTLVPAKFEFLTR---RKGHEKVMESINAAI-EVGY--NPVKVNCVVMRGFND--DEICDFV 146 (298)
Q Consensus 75 ~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~---~~~~~~v~~~i~~l~-~~g~--~~v~i~~vi~~~~n~--~~i~~i~ 146 (298)
+.+++|.+.....+.||||+++++.|+++++ ..+++.++++++.+. +.|. .++.+++++.+|.|+ +++.+++
T Consensus 217 p~i~~L~~~~d~~LaiSLka~d~e~~~~i~pv~~~~~le~vl~ai~~~~~~~g~~~~~V~ie~vLI~GvNDs~e~~~~La 296 (404)
T 3rfa_A 217 PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLA 296 (404)
T ss_dssp HHHHHHHHHCCCEEEEECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHCTTTTTCEEEEEEEBTTTTCSHHHHHHHH
T ss_pred HHHHHHHHhhcceEEecccCCCHHHHHHhcCCccCCCHHHHHHHHHHHHHHhCCCcccEEEEEEEecCCCCCHHHHHHHH
Confidence 4578888775567889999999999999985 346999999996554 5554 269999999999986 4699999
Q ss_pred HHHhhCCCeeEEEeeecCCCCCCc
Q 022377 147 ELTRDRPINIRFIEFMPFDGNVWN 170 (298)
Q Consensus 147 ~~~~~~g~~~~~~~~~p~~~~~~~ 170 (298)
+++..+++.+.+++|.|+....+.
T Consensus 297 ~ll~~l~~~VnLIpynP~~~~~~~ 320 (404)
T 3rfa_A 297 ELLKDTPCKINLIPWNPFPGAPYG 320 (404)
T ss_dssp HHTTTSCEEEEEEECCCCTTCCCC
T ss_pred HHHHcCCCcEEEEeccCCCCCCCC
Confidence 999998888888888887655443
No 8
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=99.74 E-value=9.5e-17 Score=144.10 Aligned_cols=169 Identities=21% Similarity=0.255 Sum_probs=142.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCc-cCcc-ccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGE-PTVR-KDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGE-Pll~-~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~i 90 (298)
..|+.|++.+.++++.+.|+..|.|+||| |+++ +.+.++++.+++. ++. +. +|+|.+..+.++.|+++|++.+.+
T Consensus 82 ~~ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~-~~~-i~-~s~g~l~~e~l~~L~~ag~~~v~i 158 (348)
T 3iix_A 82 YRMTPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKM-GVA-VT-LSLGEWPREYYEKWKEAGADRYLL 158 (348)
T ss_dssp CBCCHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTT-SCE-EE-EECCCCCHHHHHHHHHHTCCEEEC
T ss_pred eeCCHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhc-Cce-EE-EecCCCCHHHHHHHHHhCCCEEee
Confidence 35999999999999999999999999999 8888 4577999999985 663 55 366766688999999999999999
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEec-CCCHhHHHHHHHHHhhCCCe-eEEEeeecCCCCC
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVELTRDRPIN-IRFIEFMPFDGNV 168 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~-~~n~~~i~~i~~~~~~~g~~-~~~~~~~p~~~~~ 168 (298)
|+++.+++.++.+++..++++++++++.+++.|+ .+.+.+++.- +.+.+++.++++++.+++++ +.+..|.|..++.
T Consensus 159 ~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi-~v~~~~i~G~p~et~e~~~~~~~~l~~l~~~~i~i~~~~p~~gt~ 237 (348)
T 3iix_A 159 RHETANPVLHRKLRPDTSFENRLNCLLTLKELGY-ETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTP 237 (348)
T ss_dssp CCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTC-EEEECBEESCTTCCHHHHHHHHHHHHHHTCSEECCEECCCCTTST
T ss_pred eeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCC-eeccceEEeCCCCCHHHHHHHHHHHHhcCCCEEeeeeeecCCCCC
Confidence 9999999999999988899999999999999999 7777665553 77899999999999999884 6777888887776
Q ss_pred CcccCCCCHHHHHHHHH
Q 022377 169 WNVKKLVPYAEMLDTVV 185 (298)
Q Consensus 169 ~~~~~~~~~~e~~~~i~ 185 (298)
+......+.++.++.++
T Consensus 238 l~~~~~~~~~e~~~~~a 254 (348)
T 3iix_A 238 LANEKKGDFTLTLKMVA 254 (348)
T ss_dssp TTTSCCCCHHHHHHHHH
T ss_pred cccCCCCCHHHHHHHHH
Confidence 65555566666655443
No 9
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=99.64 E-value=1.5e-14 Score=130.80 Aligned_cols=168 Identities=16% Similarity=0.237 Sum_probs=138.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCC--ccCcc--ccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCe
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGG--EPTVR--KDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTS 87 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGG--EPll~--~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~ 87 (298)
...++.+++.+.++++.+.|+..|.|+|| ||... ..+.++++.+++. ++. +. .|||++..+.++.|+++|++.
T Consensus 96 ~~~~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~-g~~-i~-~t~G~l~~e~l~~L~~aGvd~ 172 (369)
T 1r30_A 96 ERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAM-GLE-AC-MTLGTLSESQAQRLANAGLDY 172 (369)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHT-TSE-EE-EECSSCCHHHHHHHHHHCCCE
T ss_pred cccCCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHc-CCe-EE-EecCCCCHHHHHHHHHCCCCE
Confidence 45699999999999998899999999864 46543 4577999999984 885 76 599987788999999999999
Q ss_pred EEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCC--C-eeEEEeeecC
Q 022377 88 VNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRP--I-NIRFIEFMPF 164 (298)
Q Consensus 88 v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g--~-~~~~~~~~p~ 164 (298)
+++++++ +++.|+.+++..+++.++++++.++++|+ ++.+.+++.-+.+.+++.++++++.+++ + .+.+..+.|.
T Consensus 173 v~i~les-~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi-~v~~~~I~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~l~p~ 250 (369)
T 1r30_A 173 YNHNLDT-SPEFYGNIITTRTYQERLDTLEKVRDAGI-KVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKV 250 (369)
T ss_dssp EECCCBS-CHHHHHHHCCSSCHHHHHHHHHHHHHHHC-EEECCEEECSSCCHHHHHHHHHHHHSSSSCCSEEEEEECCCC
T ss_pred EeecCcC-CHHHHHHhCCCCCHHHHHHHHHHHHHcCC-eeeeeeEeeCCCCHHHHHHHHHHHHhhcCCCCEEEeeeeeec
Confidence 9999999 89999999998889999999999999999 7776655544578899999999999987 4 5677788888
Q ss_pred CCCCCcccCCCCHHHHHHHH
Q 022377 165 DGNVWNVKKLVPYAEMLDTV 184 (298)
Q Consensus 165 ~~~~~~~~~~~~~~e~~~~i 184 (298)
.++.+......+.++..+.+
T Consensus 251 ~gT~l~~~~~~~~~~~~~~~ 270 (369)
T 1r30_A 251 KGTPLADNDDVDAFDFIRTI 270 (369)
T ss_dssp TTSTTSSCCCCCHHHHHHHH
T ss_pred CCCcCCCCCCCCHHHHHHHH
Confidence 77766554556666655543
No 10
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=99.63 E-value=8.2e-15 Score=131.63 Aligned_cols=174 Identities=17% Similarity=0.187 Sum_probs=140.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCc-cCcc---ccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCe
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGE-PTVR---KDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTS 87 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGE-Pll~---~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~ 87 (298)
...|+.|++.+.++++.+.|+..|.|+||| |+.. .++.++++.+++..++. +.+ |.|.+..+.++.|+++|++.
T Consensus 88 ~~~ls~eei~~~~~~~~~~G~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~i~-i~~-s~g~~~~e~l~~L~~aG~~~ 165 (350)
T 3t7v_A 88 RYRLTMEEIKETCKTLKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGLP-IMI-SPGLMDNATLLKAREKGANF 165 (350)
T ss_dssp CCBCCHHHHHHHHHHHTTSCCSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHCSC-EEE-ECSSCCHHHHHHHHHTTEEE
T ss_pred ceeCCHHHHHHHHHHHHHCCCCEEEEeeCCCCccccCHHHHHHHHHHHHhhcCce-EEE-eCCCCCHHHHHHHHHcCCCE
Confidence 335899999999999999999999999999 9876 34679999988644774 654 56666678999999999999
Q ss_pred EEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCe-eEEEeeecCCC
Q 022377 88 VNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPIN-IRFIEFMPFDG 166 (298)
Q Consensus 88 v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~-~~~~~~~p~~~ 166 (298)
+.+++++.+++.++.+++..+++..+++++.+++.|+ ++...+++.-+++.+++.+.++++.+++++ +.+..|.|..+
T Consensus 166 i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi-~v~~~~i~Glget~e~~~~~l~~l~~l~~~~v~~~~f~p~~g 244 (350)
T 3t7v_A 166 LALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGY-CVEDGILTGVGNDIESTILSLRGMSTNDPDMVRVMTFLPQEG 244 (350)
T ss_dssp EECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTC-EEEEEEEESSSCCHHHHHHHHHHHHHTCCSEEEEEECCCCTT
T ss_pred EEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCC-eEccceEeecCCCHHHHHHHHHHHHhCCCCEEEecceeeCCC
Confidence 9999999999999999988889999999999999999 777776666567889999999999999984 78888999776
Q ss_pred CCCcccCCCC---HHHHHHHHHHhC
Q 022377 167 NVWNVKKLVP---YAEMLDTVVKKF 188 (298)
Q Consensus 167 ~~~~~~~~~~---~~e~~~~i~~~~ 188 (298)
+++......+ ..+++.......
T Consensus 245 T~l~~~~~~~~~e~l~~ia~~Rl~l 269 (350)
T 3t7v_A 245 TPLEGFRDKSNLSELKIISVLRLMF 269 (350)
T ss_dssp STTTTCCCCCCCCHHHHHHHHHHHS
T ss_pred CcCccCCCCChHHHHHHHHHHHHhC
Confidence 6554433333 344444444334
No 11
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=99.42 E-value=2.4e-11 Score=106.78 Aligned_cols=158 Identities=13% Similarity=0.195 Sum_probs=125.8
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCc-------cccHHHHHHHHhccCCCCcEEE-EeCccch-HhhHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTV-------RKDIEEACFHLSKLKGLKTLAM-TTNGLTL-ARKLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll-------~~~~~~ii~~~~~~~~~~~v~i-~TNG~ll-~~~~~~l~ 81 (298)
+....+.+++.+-++.+.+.|++.|.|+|++++. .+++.++++.+++..++..+.+ +||+..+ ++.++.|.
T Consensus 29 ~~r~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~~gi~~ir~~~~~p~~l~~e~l~~l~ 108 (304)
T 2qgq_A 29 SLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLTEEIISAML 108 (304)
T ss_dssp CCCBCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTSSSSCEEEECCCCGGGCCHHHHHHHH
T ss_pred CceeeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhcCCCcEEEEeeeecccCCHHHHHHHH
Confidence 3457899999999999988999999999877665 3568899999988656643555 4788777 56899999
Q ss_pred HcC--CCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHH--cCCCCEEEEEEE-ecCCCHhHHHHHHHHHhhCCC-e
Q 022377 82 ESG--LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIE--VGYNPVKVNCVV-MRGFNDDEICDFVELTRDRPI-N 155 (298)
Q Consensus 82 ~~~--~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~--~g~~~v~i~~vi-~~~~n~~~i~~i~~~~~~~g~-~ 155 (298)
+++ +..+.+++++.+++..+.+++..+++.++++++.+++ .|+ .+...+++ .||++.+++.+.++++.++++ .
T Consensus 109 ~~g~~~~~l~i~lqs~s~~vl~~m~r~~t~e~~~~~i~~l~~~~~gi-~i~~~~IvG~PgEt~ed~~~t~~~l~~l~~~~ 187 (304)
T 2qgq_A 109 ELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDA-VLRTSIIVGFPGETEEDFEELKQFVEEIQFDK 187 (304)
T ss_dssp HCTTBCCEEECCCBCSCHHHHHHTTCCSCHHHHHHHHHHHHHHCTTC-EEEEEEEECCTTCCHHHHHHHHHHHHHHCCSE
T ss_pred hCCCCccEEEEecccCCHHHHHHhCCCCCHHHHHHHHHHHHhhCCCC-EEEEEEEEeCCCCCHHHHHHHHHHHHHcCCCE
Confidence 998 8999999999999999999888889999999999999 466 55555444 378899999999999999988 4
Q ss_pred eEEEeeecCCCCCC
Q 022377 156 IRFIEFMPFDGNVW 169 (298)
Q Consensus 156 ~~~~~~~p~~~~~~ 169 (298)
+.+..|.|..++..
T Consensus 188 v~~~~~~p~pgT~~ 201 (304)
T 2qgq_A 188 LGAFVYSDEEGTVA 201 (304)
T ss_dssp EEEEECCC------
T ss_pred EEEEEeeCCCCChh
Confidence 67778888765543
No 12
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=99.33 E-value=2.4e-11 Score=112.72 Aligned_cols=134 Identities=12% Similarity=0.243 Sum_probs=113.0
Q ss_pred CCEEEEcCCccCcc--ccHHHHHHHHhccC----CCCcEEEEeCccch-HhhHHHHHHcCCCeEEEecCCCCHHhhhhhc
Q 022377 32 VDKIRLTGGEPTVR--KDIEEACFHLSKLK----GLKTLAMTTNGLTL-ARKLPKLKESGLTSVNISLDTLVPAKFEFLT 104 (298)
Q Consensus 32 ~~~v~~tGGEPll~--~~~~~ii~~~~~~~----~~~~v~i~TNG~ll-~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir 104 (298)
+..|.|.||+|++. .++.++++.+++.. .. .+++.||+..+ ++.++.|+++|++.|++++++.++++.+.++
T Consensus 105 i~~i~fgGGtpt~l~~~~l~~ll~~i~~~~~~~~~~-eitie~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~ 183 (457)
T 1olt_A 105 VSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADA-EISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVN 183 (457)
T ss_dssp EEEEEEEESCGGGSCHHHHHHHHHHHHHHSCEEEEE-EEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHT
T ss_pred eEEEEEeCCCcccCCHHHHHHHHHHHHHhCCCCCCc-EEEEEEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHHHhC
Confidence 56889999999964 35779999988732 24 48899999877 5789999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCCCEEEEEEE-ecCCCHhHHHHHHHHHhhCCC-eeEEEeeecCCC
Q 022377 105 RRKGHEKVMESINAAIEVGYNPVKVNCVV-MRGFNDDEICDFVELTRDRPI-NIRFIEFMPFDG 166 (298)
Q Consensus 105 ~~~~~~~v~~~i~~l~~~g~~~v~i~~vi-~~~~n~~~i~~i~~~~~~~g~-~~~~~~~~p~~~ 166 (298)
+..+++.++++++.++++|+..+.+.+++ .||++.+++.+.++++.++++ .+.+..+.|...
T Consensus 184 R~~~~~~~~~ai~~~r~~G~~~v~~dlI~GlPget~e~~~~tl~~~~~l~~~~i~~y~l~~~p~ 247 (457)
T 1olt_A 184 REQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPT 247 (457)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCSCEEEEEESCTTCCHHHHHHHHHHHHHHCCSEEEEEECCCCTT
T ss_pred CCCCHHHHHHHHHHHHHcCCCcEEEEEEcCCCCCCHHHHHHHHHHHHhcCcCEEEeecCcCCcC
Confidence 98899999999999999999328777655 578999999999999999998 467777775544
No 13
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=98.36 E-value=3.7e-06 Score=73.32 Aligned_cols=173 Identities=14% Similarity=0.145 Sum_probs=118.4
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcCC-----ccCccccHHHHHHHHhccCCCCcEEEEeCccchHhh
Q 022377 2 PPEGVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTGG-----EPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARK 76 (298)
Q Consensus 2 ~~~~~~~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tGG-----EPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~ 76 (298)
||+|.|.. ...++.++..++++.+.+.|+..|-++++ +|.+. +..++++.+++..+.. +.+.+ ...+.
T Consensus 13 lRDG~Q~~--~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~-d~~~~~~~~~~~~~~~-~~~l~---~~~~~ 85 (298)
T 2cw6_A 13 PRDGLQNE--KNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMG-DHTEVLKGIQKFPGIN-YPVLT---PNLKG 85 (298)
T ss_dssp TTHHHHTC--SSCCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGT-THHHHHHHSCCCTTCB-CCEEC---CSHHH
T ss_pred CCcccCCC--CCCCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccC-CHHHHHHHHhhCCCCE-EEEEc---CCHHh
Confidence 45554443 46799999999999999999999888765 68774 6677888877644553 44332 12456
Q ss_pred HHHHHHcCCCeEEEecCCCCHHhhhhhcCC--CcHHHHHHHHHHHHHcCCCCEEEEEEEe-------cCCCHhHHHHHHH
Q 022377 77 LPKLKESGLTSVNISLDTLVPAKFEFLTRR--KGHEKVMESINAAIEVGYNPVKVNCVVM-------RGFNDDEICDFVE 147 (298)
Q Consensus 77 ~~~l~~~~~~~v~iSldg~~~~~~~~ir~~--~~~~~v~~~i~~l~~~g~~~v~i~~vi~-------~~~n~~~i~~i~~ 147 (298)
++...++|++.|.|++...+......++.. ..++.+.+.++.+++.|+ .+.+++... + .+.+++.++++
T Consensus 86 i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~-~v~~~l~~~~~~~~~~~-~~~~~~~~~~~ 163 (298)
T 2cw6_A 86 FEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANI-SVRGYVSCALGCPYEGK-ISPAKVAEVTK 163 (298)
T ss_dssp HHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTC-EEEEEEETTTCBTTTBS-CCHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-eEEEEEEEEeeCCcCCC-CCHHHHHHHHH
Confidence 888899999999998766422223334432 248999999999999999 887766432 3 57889999999
Q ss_pred HHhhCCCeeEEEeeecCCCCCCcccCCCCHHHHHHHHHHhCC
Q 022377 148 LTRDRPINIRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKKFP 189 (298)
Q Consensus 148 ~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~~ 189 (298)
.+.+.|++. +.+...-+. ..+....++++.+.+.++
T Consensus 164 ~~~~~Ga~~--i~l~DT~G~----~~P~~~~~lv~~l~~~~~ 199 (298)
T 2cw6_A 164 KFYSMGCYE--ISLGDTIGV----GTPGIMKDMLSAVMQEVP 199 (298)
T ss_dssp HHHHTTCSE--EEEEETTSC----CCHHHHHHHHHHHHHHSC
T ss_pred HHHHcCCCE--EEecCCCCC----cCHHHHHHHHHHHHHhCC
Confidence 999999852 333332221 012234566667766663
No 14
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=98.31 E-value=4.8e-06 Score=72.55 Aligned_cols=143 Identities=15% Similarity=0.243 Sum_probs=102.7
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcC---Cc--cCccccHHHHHHHHhccCCCCcEEEEeCccchHhh
Q 022377 2 PPEGVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTG---GE--PTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARK 76 (298)
Q Consensus 2 ~~~~~~~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tG---GE--Pll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~ 76 (298)
||+|.|.. ...++.++..++++.+.+.|+..|.+++ ++ |.+. +..++++.+.+..+.. +.+.+ ...+.
T Consensus 12 lRDG~Q~~--~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~-~~~e~~~~i~~~~~~~-v~~l~---~n~~~ 84 (295)
T 1ydn_A 12 ARDGLQNE--KRFVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLA-DSREVMAGIRRADGVR-YSVLV---PNMKG 84 (295)
T ss_dssp TTHHHHTS--SSCCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGT-THHHHHHHSCCCSSSE-EEEEC---SSHHH
T ss_pred CCccccCC--CCCcCHHHHHHHHHHHHHcCcCEEEEccCcCcccccccc-CHHHHHHHHHhCCCCE-EEEEe---CCHHH
Confidence 45555544 3459999999999999999999888864 55 5555 6678888887754664 54433 12467
Q ss_pred HHHHHHcCCCeEEEecCCCCHHhhhhhcCC----CcHHHHHHHHHHHHHcCCCCEE--EEEEE-----ecCCCHhHHHHH
Q 022377 77 LPKLKESGLTSVNISLDTLVPAKFEFLTRR----KGHEKVMESINAAIEVGYNPVK--VNCVV-----MRGFNDDEICDF 145 (298)
Q Consensus 77 ~~~l~~~~~~~v~iSldg~~~~~~~~ir~~----~~~~~v~~~i~~l~~~g~~~v~--i~~vi-----~~~~n~~~i~~i 145 (298)
+++..++|++.|.|++.+ + +.|.+..-. .+++.+.+.++.+++.|+ .|. +.+++ ++ .+.+++.++
T Consensus 85 i~~a~~~G~~~V~i~~~~-S-~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~-~V~~~l~~~~~~e~~~~-~~~~~~~~~ 160 (295)
T 1ydn_A 85 YEAAAAAHADEIAVFISA-S-EGFSKANINCTIAESIERLSPVIGAAINDGL-AIRGYVSCVVECPYDGP-VTPQAVASV 160 (295)
T ss_dssp HHHHHHTTCSEEEEEEES-C-HHHHHHHTSSCHHHHHHHHHHHHHHHHHTTC-EEEEEEECSSEETTTEE-CCHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEec-C-HHHHHHHcCCCHHHHHHHHHHHHHHHHHcCC-eEEEEEEEEecCCcCCC-CCHHHHHHH
Confidence 888899999999998766 3 344443221 237777788999999999 777 33333 34 578889999
Q ss_pred HHHHhhCCCe
Q 022377 146 VELTRDRPIN 155 (298)
Q Consensus 146 ~~~~~~~g~~ 155 (298)
++.+.+.|++
T Consensus 161 ~~~~~~~G~d 170 (295)
T 1ydn_A 161 TEQLFSLGCH 170 (295)
T ss_dssp HHHHHHHTCS
T ss_pred HHHHHhcCCC
Confidence 9999899986
No 15
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=97.47 E-value=0.0027 Score=55.20 Aligned_cols=145 Identities=15% Similarity=0.161 Sum_probs=98.2
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcC-----CccCccccHHHHHHHHhccCCCCcEEEEeCccchHhh
Q 022377 2 PPEGVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTG-----GEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARK 76 (298)
Q Consensus 2 ~~~~~~~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tG-----GEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~ 76 (298)
||+|.|.. ...++.|+..++++.+.+.|+..|-... .-|.+ .+..++++.+.+..+.. +.+.. ...+.
T Consensus 16 lRDG~Q~~--~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~-~d~~~~~~~~~~~~~~~-~~~l~---~~~~~ 88 (302)
T 2ftp_A 16 PRDGLQNE--KQPIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQM-AGSAEVFAGIRQRPGVT-YAALA---PNLKG 88 (302)
T ss_dssp TTHHHHTS--SSCCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGG-TTHHHHHHHSCCCTTSE-EEEEC---CSHHH
T ss_pred CCCCccCC--CCCCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccc-cCHHHHHHHhhhcCCCE-EEEEe---CCHHH
Confidence 45665554 4679999999999999999998887754 24555 35667777776644553 54433 12457
Q ss_pred HHHHHHcCCCeEEEecCCCCHHh-hhhhcCC--CcHHHHHHHHHHHHHcCCCCEEEEEEEecC------CCHhHHHHHHH
Q 022377 77 LPKLKESGLTSVNISLDTLVPAK-FEFLTRR--KGHEKVMESINAAIEVGYNPVKVNCVVMRG------FNDDEICDFVE 147 (298)
Q Consensus 77 ~~~l~~~~~~~v~iSldg~~~~~-~~~ir~~--~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~------~n~~~i~~i~~ 147 (298)
++...++|++.|.|.... ++.+ ...++.. .+++.+.+.++.+++.|+ .|.......-+ .+.+++.++++
T Consensus 89 i~~a~~aG~~~v~i~~~~-s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~-~V~~~l~~~~~~e~~~~~~~~~~~~~~~ 166 (302)
T 2ftp_A 89 FEAALESGVKEVAVFAAA-SEAFSQRNINCSIKDSLERFVPVLEAARQHQV-RVRGYISCVLGCPYDGDVDPRQVAWVAR 166 (302)
T ss_dssp HHHHHHTTCCEEEEEEES-CHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTC-EEEEEEECTTCBTTTBCCCHHHHHHHHH
T ss_pred HHHHHhCCcCEEEEEEec-CHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-eEEEEEEEEeeCCcCCCCCHHHHHHHHH
Confidence 888889999999987544 3322 1223221 237778888888899999 77655433211 35677888888
Q ss_pred HHhhCCCe
Q 022377 148 LTRDRPIN 155 (298)
Q Consensus 148 ~~~~~g~~ 155 (298)
.+.+.|++
T Consensus 167 ~~~~~G~d 174 (302)
T 2ftp_A 167 ELQQMGCY 174 (302)
T ss_dssp HHHHTTCS
T ss_pred HHHHcCCC
Confidence 88899986
No 16
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=97.43 E-value=0.0032 Score=57.04 Aligned_cols=144 Identities=19% Similarity=0.231 Sum_probs=101.1
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHH
Q 022377 2 PPEGVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLK 81 (298)
Q Consensus 2 ~~~~~~~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~ 81 (298)
||+|.|.. ...|+.++-.++++.+.+.|+..|-. |-|-..|+..+.++.+.+. +.. ..+.+-.....+.++...
T Consensus 47 LRDG~Q~~--~~~~s~eeKl~Ia~~L~~~Gv~~IEv--G~P~asp~d~~~~~~i~~~-~~~-~~v~~~~r~~~~di~~A~ 120 (423)
T 3ivs_A 47 LREGEQFA--NAFFDTEKKIQIAKALDNFGVDYIEL--TSPVASEQSRQDCEAICKL-GLK-CKILTHIRCHMDDARVAV 120 (423)
T ss_dssp TTGGGGST--TCCCCHHHHHHHHHHHHHHTCSEEEE--CCTTSCHHHHHHHHHHHTS-CCS-SEEEEEEESCHHHHHHHH
T ss_pred CCCCCCCC--CCCcCHHHHHHHHHHHHHcCCCEEEE--eecccCHHHHHHHHHHHhc-CCC-CEEEEeeccChhhHHHHH
Confidence 56666654 45799999999999999999998887 3488888877778877774 654 555543332345578888
Q ss_pred HcCCCeEEEecCCCCHHhhhhh--cCC--CcHHHHHHHHHHHHHcCCCCEEEEEE-EecCCCHhHHHHHHHHHhhCCCe
Q 022377 82 ESGLTSVNISLDTLVPAKFEFL--TRR--KGHEKVMESINAAIEVGYNPVKVNCV-VMRGFNDDEICDFVELTRDRPIN 155 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~i--r~~--~~~~~v~~~i~~l~~~g~~~v~i~~v-i~~~~n~~~i~~i~~~~~~~g~~ 155 (298)
++|++.|.|.+-.- +.|... +.. ..++.+.+.++.+++.|. .|.+... .++ .+.+.+.++++.+.+.|++
T Consensus 121 ~aG~~~V~i~~s~S--d~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~-~V~~~~eda~r-~d~~~~~~v~~~~~~~Ga~ 195 (423)
T 3ivs_A 121 ETGVDGVDVVIGTS--QYLRKYSHGKDMTYIIDSATEVINFVKSKGI-EVRFSSEDSFR-SDLVDLLSLYKAVDKIGVN 195 (423)
T ss_dssp HTTCSEEEEEEEC---------------CHHHHHHHHHHHHHHTTTC-EEEEEEESGGG-SCHHHHHHHHHHHHHHCCS
T ss_pred HcCCCEEEEEeecc--HHHHHHHcCCCHHHHHHHHHHHHHHHHHCCC-EEEEEEccCcC-CCHHHHHHHHHHHHHhCCC
Confidence 89999999987653 333322 211 237888889999999998 7776643 334 5677888888888888875
No 17
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=97.41 E-value=0.0021 Score=56.00 Aligned_cols=144 Identities=13% Similarity=0.197 Sum_probs=98.2
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcCC-----ccCccccHHHHHHHHhccCCCCcEEEEeCccchHhh
Q 022377 2 PPEGVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTGG-----EPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARK 76 (298)
Q Consensus 2 ~~~~~~~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tGG-----EPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~ 76 (298)
||+|.|.. ...++.++..++++.+.+.|+..|-...+ -|.+ .+..++++.+.+..+.. +...+- -.+.
T Consensus 14 lRDG~Q~~--~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~-~d~~~~~~~~~~~~~~~-~~~l~~---~~~~ 86 (307)
T 1ydo_A 14 PRDGLQNE--PVWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPAL-RDAIDVAKGIDREKGVT-YAALVP---NQRG 86 (307)
T ss_dssp HHHTGGGS--SSCCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGG-TTHHHHHHHSCCCTTCE-EEEECC---SHHH
T ss_pred CCCCcCCC--CCCCCHHHHHHHHHHHHHcCCCEEEECCCcCccccccc-CCHHHHHHHhhhcCCCe-EEEEeC---CHHh
Confidence 35565544 36799999999999999999998888642 3444 35557777776544543 443331 1346
Q ss_pred HHHHHHcCCCeEEEecCCCCHHhhhh--hcCC--CcHHHHHHHHHHHHHcCCCCEEEEEEEec------CCCHhHHHHHH
Q 022377 77 LPKLKESGLTSVNISLDTLVPAKFEF--LTRR--KGHEKVMESINAAIEVGYNPVKVNCVVMR------GFNDDEICDFV 146 (298)
Q Consensus 77 ~~~l~~~~~~~v~iSldg~~~~~~~~--ir~~--~~~~~v~~~i~~l~~~g~~~v~i~~vi~~------~~n~~~i~~i~ 146 (298)
++...++|++.|.|.+.. ++ .|.. ++.. ..++.+.+.++.+++.|. .+..+....- ..+.+.+.+++
T Consensus 87 i~~a~~~g~~~v~i~~~~-sd-~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~-~v~~~i~~~~~~~~~~~~~~~~~~~~~ 163 (307)
T 1ydo_A 87 LENALEGGINEACVFMSA-SE-THNRKNINKSTSESLHILKQVNNDAQKANL-TTRAYLSTVFGCPYEKDVPIEQVIRLS 163 (307)
T ss_dssp HHHHHHHTCSEEEEEEES-SH-HHHHTTTCSCHHHHHHHHHHHHHHHHHTTC-EEEEEEECTTCBTTTBCCCHHHHHHHH
T ss_pred HHHHHhCCcCEEEEEeec-CH-HHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-EEEEEEEEEecCCcCCCCCHHHHHHHH
Confidence 888888999999998755 33 3322 2221 137788888999999999 7766554421 14567888899
Q ss_pred HHHhhCCCe
Q 022377 147 ELTRDRPIN 155 (298)
Q Consensus 147 ~~~~~~g~~ 155 (298)
+.+.+.|++
T Consensus 164 ~~~~~~Ga~ 172 (307)
T 1ydo_A 164 EALFEFGIS 172 (307)
T ss_dssp HHHHHHTCS
T ss_pred HHHHhcCCC
Confidence 988888885
No 18
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=97.33 E-value=0.0078 Score=51.98 Aligned_cols=175 Identities=14% Similarity=0.088 Sum_probs=106.6
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhc-cCCCCcEEEEeCcc--chHhhHH
Q 022377 2 PPEGVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSK-LKGLKTLAMTTNGL--TLARKLP 78 (298)
Q Consensus 2 ~~~~~~~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~-~~~~~~v~i~TNG~--ll~~~~~ 78 (298)
||+|.|.. ...++.++-.++++.+.+.|+..|-... |-..|+=.+.++.+.+ ..+.. +...+-+. -++..++
T Consensus 13 lRDG~Q~~--~~~~~~~~K~~i~~~L~~~Gv~~IE~g~--p~~~~~d~e~v~~i~~~~~~~~-i~~l~~~~~~di~~a~~ 87 (293)
T 3ewb_X 13 LRDGEQTP--GVNFDVKEKIQIALQLEKLGIDVIEAGF--PISSPGDFECVKAIAKAIKHCS-VTGLARCVEGDIDRAEE 87 (293)
T ss_dssp TTCCC-------CCCHHHHHHHHHHHHHHTCSEEEEEC--GGGCHHHHHHHHHHHHHCCSSE-EEEEEESSHHHHHHHHH
T ss_pred CCCcCcCC--CCCCCHHHHHHHHHHHHHcCCCEEEEeC--CCCCccHHHHHHHHHHhcCCCE-EEEEecCCHHHHHHHHH
Confidence 68877776 6689999999999999999999888764 6666643344444443 23443 44333221 1233455
Q ss_pred HHHHcCCCeEEEecCCCCHHhhhh--hcCC--CcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCC
Q 022377 79 KLKESGLTSVNISLDTLVPAKFEF--LTRR--KGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPI 154 (298)
Q Consensus 79 ~l~~~~~~~v~iSldg~~~~~~~~--ir~~--~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~ 154 (298)
.+..++.+.|.+.+-. ++ .|.. ++.. ..++.+.+.++.+++.|. .|.+...-....+.+.+.++++.+.+.|+
T Consensus 88 ~~~~ag~~~v~i~~~~-Sd-~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~-~v~~~~~d~~~~~~~~~~~~~~~~~~~G~ 164 (293)
T 3ewb_X 88 ALKDAVSPQIHIFLAT-SD-VHMEYKLKMSRAEVLASIKHHISYARQKFD-VVQFSPEDATRSDRAFLIEAVQTAIDAGA 164 (293)
T ss_dssp HHTTCSSEEEEEEEEC-SH-HHHHHTTCCCHHHHHHHHHHHHHHHHTTCS-CEEEEEETGGGSCHHHHHHHHHHHHHTTC
T ss_pred HHhhcCCCEEEEEecC-cH-HHHHHHhCCCHHHHHHHHHHHHHHHHhCCC-EEEEEeccCCCCCHHHHHHHHHHHHHcCC
Confidence 5556789988888655 33 3322 2221 136777778888888888 77765543222567778899999999998
Q ss_pred eeEEEeeecCCCCCCcccCCCCHHHHHHHHHHhCCC
Q 022377 155 NIRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKKFPG 190 (298)
Q Consensus 155 ~~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~~~ 190 (298)
+ .+.+....+.. .+....++++.+.+.+++
T Consensus 165 ~--~i~l~DT~G~~----~P~~v~~lv~~l~~~~~~ 194 (293)
T 3ewb_X 165 T--VINIPDTVGYT----NPTEFGQLFQDLRREIKQ 194 (293)
T ss_dssp C--EEEEECSSSCC----CHHHHHHHHHHHHHHCTT
T ss_pred C--EEEecCCCCCC----CHHHHHHHHHHHHHhcCC
Confidence 5 33444332221 112355667777777753
No 19
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=97.25 E-value=0.0057 Score=54.95 Aligned_cols=169 Identities=15% Similarity=0.143 Sum_probs=108.6
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHH
Q 022377 2 PPEGVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLK 81 (298)
Q Consensus 2 ~~~~~~~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~ 81 (298)
+|+|.|.. ...|+.++..++++.+.+.|+..|-..+ |-..|...+.++.+.+. +.. ..+.+-..-..+.++...
T Consensus 11 LRDG~Q~~--~~~~~~~~k~~ia~~L~~~Gv~~IE~g~--p~~~~~~~~~~~~i~~~-~~~-~~v~~~~r~~~~di~~a~ 84 (382)
T 2ztj_A 11 LREGEQFE--KANFSTQDKVEIAKALDEFGIEYIEVTT--PVASPQSRKDAEVLASL-GLK-AKVVTHIQCRLDAAKVAV 84 (382)
T ss_dssp ETGGGGST--TCCCCHHHHHHHHHHHHHHTCSEEEECC--TTSCHHHHHHHHHHHTS-CCS-SEEEEEEESCHHHHHHHH
T ss_pred CCcccCCC--CCCcCHHHHHHHHHHHHHcCcCEEEEcC--CcCCHHHHHHHHHHHhc-CCC-cEEEEEcccChhhHHHHH
Confidence 46777765 3589999999999999999999888854 87888877888888874 553 444432222234588888
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCc----HHHHHHHHHHHHHcC--CCCEEEEEEEecCCCHhHHHHHHHHHhhCCCe
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKG----HEKVMESINAAIEVG--YNPVKVNCVVMRGFNDDEICDFVELTRDRPIN 155 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~----~~~v~~~i~~l~~~g--~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~ 155 (298)
++|++.|.+.+-. + +.|.. .-+.+ ++.+.+.++.+++.| + .+.+...-....+.+.+.++++.+.+. ++
T Consensus 85 ~~g~~~v~i~~~~-s-~~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~~~-~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~ 159 (382)
T 2ztj_A 85 ETGVQGIDLLFGT-S-KYLRA-PHGRDIPRIIEEAKEVIAYIREAAPHV-EVRFSAEDTFRSEEQDLLAVYEAVAPY-VD 159 (382)
T ss_dssp HTTCSEEEEEECC-----------CCCHHHHHHHHHHHHHHHHHHCTTS-EEEEEETTTTTSCHHHHHHHHHHHGGG-CS
T ss_pred HcCCCEEEEEecc-C-HHHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCE-EEEEEEEeCCCCCHHHHHHHHHHHHHh-cC
Confidence 9999999988654 3 33433 22222 677888889999999 6 666655322225667788888888877 54
Q ss_pred eEEEeeecCCCCCCcccCCCCHHHHHHHHHHh
Q 022377 156 IRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKK 187 (298)
Q Consensus 156 ~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~ 187 (298)
.+.+...-+.. .+....++.+.+.+.
T Consensus 160 --~i~l~DT~G~~----~P~~~~~lv~~l~~~ 185 (382)
T 2ztj_A 160 --RVGLADTVGVA----TPRQVYALVREVRRV 185 (382)
T ss_dssp --EEEEEETTSCC----CHHHHHHHHHHHHHH
T ss_pred --EEEecCCCCCC----CHHHHHHHHHHHHHh
Confidence 34444332221 112244556666654
No 20
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=97.04 E-value=0.0049 Score=54.41 Aligned_cols=172 Identities=19% Similarity=0.168 Sum_probs=105.9
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHH-HHHhCCCCEEEEcCCccCccccHHHHHHHHhc-------cCCCCcEEEEeCccch
Q 022377 2 PPEGVDLTPKPQLLSLNEILRLAY-LFVTSGVDKIRLTGGEPTVRKDIEEACFHLSK-------LKGLKTLAMTTNGLTL 73 (298)
Q Consensus 2 ~~~~~~~~~~~~~l~~e~~~~~i~-~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~-------~~~~~~v~i~TNG~ll 73 (298)
||+|.|... ..++.++..++++ .+.+.|+..|-.. -|...++=.+.+..+++ ..+.. +...+.+
T Consensus 27 lRDG~Q~~~--~~~~~~~k~~i~~~~L~~~Gv~~IE~g--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-i~~l~~~--- 98 (337)
T 3ble_A 27 LRDGEQTRG--VSFSTSEKLNIAKFLLQKLNVDRVEIA--SARVSKGELETVQKIMEWAATEQLTERIE-ILGFVDG--- 98 (337)
T ss_dssp HHHHTTSTT--CCCCHHHHHHHHHHHHHTTCCSEEEEE--ETTSCTTHHHHHHHHHHHHHHTTCGGGEE-EEEESST---
T ss_pred CCCCCCCCC--CCcCHHHHHHHHHHHHHHcCCCEEEEe--CCCCChhHHHHHHHHHhhhhhhccCCCCe-EEEEccc---
Confidence 456666654 3599999999999 9999999988874 34444533333333332 12222 3332222
Q ss_pred HhhHHHHHHcCCCeEEEecCCCCHH-hhhhhcCC--CcHHHHHHHHHHHHHcCCCCEEEEEEE---ecCCCHhHHHHHHH
Q 022377 74 ARKLPKLKESGLTSVNISLDTLVPA-KFEFLTRR--KGHEKVMESINAAIEVGYNPVKVNCVV---MRGFNDDEICDFVE 147 (298)
Q Consensus 74 ~~~~~~l~~~~~~~v~iSldg~~~~-~~~~ir~~--~~~~~v~~~i~~l~~~g~~~v~i~~vi---~~~~n~~~i~~i~~ 147 (298)
.+.++...+++++.|.|.+.. ++. ....++.. ..++.+.+.++.+++.|. .+.+.+.- ....+.+.+.++++
T Consensus 99 ~~~i~~a~~~g~~~v~i~~~~-s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~ 176 (337)
T 3ble_A 99 NKTVDWIKDSGAKVLNLLTKG-SLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGL-KINVYLEDWSNGFRNSPDYVKSLVE 176 (337)
T ss_dssp THHHHHHHHHTCCEEEEEEEC-SHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTC-EEEEEEETHHHHHHHCHHHHHHHHH
T ss_pred hhhHHHHHHCCCCEEEEEEec-CHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-EEEEEEEECCCCCcCCHHHHHHHHH
Confidence 126888888999999998765 332 22233332 237888888899999999 77766543 11145677888888
Q ss_pred HHhhCCCeeEEEeeecCCCCCCcccCCCCHHHHHHHHHHhCC
Q 022377 148 LTRDRPINIRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKKFP 189 (298)
Q Consensus 148 ~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~~ 189 (298)
.+.+.|++ .+.+...-+.. .+....++++.+.+.++
T Consensus 177 ~~~~~Ga~--~i~l~DT~G~~----~P~~v~~lv~~l~~~~p 212 (337)
T 3ble_A 177 HLSKEHIE--RIFLPDTLGVL----SPEETFQGVDSLIQKYP 212 (337)
T ss_dssp HHHTSCCS--EEEEECTTCCC----CHHHHHHHHHHHHHHCT
T ss_pred HHHHcCCC--EEEEecCCCCc----CHHHHHHHHHHHHHhcC
Confidence 88888885 33333332221 11234566677777664
No 21
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=96.91 E-value=0.017 Score=51.59 Aligned_cols=174 Identities=14% Similarity=0.091 Sum_probs=109.0
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhc-cCCCCcEEEEe--CccchHhhHH
Q 022377 2 PPEGVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSK-LKGLKTLAMTT--NGLTLARKLP 78 (298)
Q Consensus 2 ~~~~~~~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~-~~~~~~v~i~T--NG~ll~~~~~ 78 (298)
||+|.|... ..|+.++-.++++.+.+.|+..|-.. =|...|+=.+.++.+.+ ..+.. +...+ |-.-++..++
T Consensus 20 LRDG~Q~~~--~~~~~~~Kl~ia~~L~~~Gv~~IE~g--~p~~~~~d~e~v~~i~~~~~~~~-i~~l~r~~~~di~~a~~ 94 (370)
T 3rmj_A 20 LRDGEQSPG--AAMTKEEKIRVARQLEKLGVDIIEAG--FAAASPGDFEAVNAIAKTITKST-VCSLSRAIERDIRQAGE 94 (370)
T ss_dssp CCCCTTSTT--CCCCHHHHHHHHHHHHHHTCSEEEEE--EGGGCHHHHHHHHHHHTTCSSSE-EEEEEESSHHHHHHHHH
T ss_pred CCccccCCC--CCcCHHHHHHHHHHHHHcCCCEEEEe--CCCCCHHHHHHHHHHHHhCCCCe-EEEEecCCHHHHHHHHH
Confidence 677777664 37999999999999999999877753 37777754445555444 22332 44333 3222234455
Q ss_pred HHHHcCCCeEEEecCCCCHHhhh--hhcCC--CcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCC
Q 022377 79 KLKESGLTSVNISLDTLVPAKFE--FLTRR--KGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPI 154 (298)
Q Consensus 79 ~l~~~~~~~v~iSldg~~~~~~~--~ir~~--~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~ 154 (298)
.+..++.+.|.+.+-.. + .|. .++.. ..++.+.+.++.++++|. .+.+.+--....+.+.+.++++.+.+.|+
T Consensus 95 al~~ag~~~v~if~~~S-d-~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~-~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga 171 (370)
T 3rmj_A 95 AVAPAPKKRIHTFIATS-P-IHMEYKLKMKPKQVIEAAVKAVKIAREYTD-DVEFSCEDALRSEIDFLAEICGAVIEAGA 171 (370)
T ss_dssp HHTTSSSEEEEEEEECS-H-HHHHHTTCCCHHHHHHHHHHHHHHHTTTCS-CEEEEEETGGGSCHHHHHHHHHHHHHHTC
T ss_pred HHhhCCCCEEEEEecCc-H-HHHHHHhCCCHHHHHHHHHHHHHHHHHcCC-EEEEecCCCCccCHHHHHHHHHHHHHcCC
Confidence 56668999999887663 3 332 33322 126777777888888888 77766643322677888899999988888
Q ss_pred eeEEEeeecCCCCCCcccCCCCHHHHHHHHHHhCC
Q 022377 155 NIRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKKFP 189 (298)
Q Consensus 155 ~~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~~ 189 (298)
+ .+.+...-+.. .+....++.+.+.+.++
T Consensus 172 ~--~i~l~DT~G~~----~P~~~~~lv~~l~~~~~ 200 (370)
T 3rmj_A 172 T--TINIPDTVGYS----IPYKTEEFFRELIAKTP 200 (370)
T ss_dssp C--EEEEECSSSCC----CHHHHHHHHHHHHHHST
T ss_pred C--EEEecCccCCc----CHHHHHHHHHHHHHhCC
Confidence 5 33344332211 11235566777777664
No 22
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=96.71 E-value=0.011 Score=51.92 Aligned_cols=175 Identities=14% Similarity=0.129 Sum_probs=105.0
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhc-cCCCCcEEEEeCcc--chHhhHH
Q 022377 2 PPEGVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSK-LKGLKTLAMTTNGL--TLARKLP 78 (298)
Q Consensus 2 ~~~~~~~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~-~~~~~~v~i~TNG~--ll~~~~~ 78 (298)
||+|.|-. ...|+.++-.++++.+.+.|+..|-.. =|...|+=.+.++.+.+ ..+.. +...+-+. -++..++
T Consensus 14 lRDG~Q~~--~~~~~~~~Kl~ia~~L~~~Gv~~IE~g--~p~~~~~d~e~v~~i~~~~~~~~-i~~l~r~~~~~i~~a~~ 88 (325)
T 3eeg_A 14 LRDGEQVP--GCQLNTEEKIIVAKALDELGVDVIEAG--FPVSSPGDFNSVVEITKAVTRPT-ICALTRAKEADINIAGE 88 (325)
T ss_dssp GGCC---------CCTTHHHHHHHHHHHHTCSEEEEE--CTTSCHHHHHHHHHHHHHCCSSE-EEEECCSCHHHHHHHHH
T ss_pred CCCcccCC--CCCCCHHHHHHHHHHHHHcCCCEEEEe--CCCCCHhHHHHHHHHHHhCCCCE-EEEeecCCHHHHHHHHH
Confidence 57777766 568999999999999999999987764 37777753344455444 23443 54443221 2233445
Q ss_pred HHHHcCCCeEEEecCCCCHHhh-hhhc--CCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCe
Q 022377 79 KLKESGLTSVNISLDTLVPAKF-EFLT--RRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPIN 155 (298)
Q Consensus 79 ~l~~~~~~~v~iSldg~~~~~~-~~ir--~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~ 155 (298)
.+..+|++.|.+.+-. ++-.. ..++ ....++.+.+.++.+++.|. .+.+.+......+.+.+.++++.+.+.|++
T Consensus 89 al~~ag~~~v~i~~s~-Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~-~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~ 166 (325)
T 3eeg_A 89 ALRFAKRSRIHTGIGS-SDIHIEHKLRSTRENILEMAVAAVKQAKKVVH-EVEFFCEDAGRADQAFLARMVEAVIEAGAD 166 (325)
T ss_dssp HHTTCSSEEEEEEEEC-SHHHHC----CCCTTGGGTTHHHHHHHHTTSS-EEEEEEETGGGSCHHHHHHHHHHHHHHTCS
T ss_pred hhcccCCCEEEEEecc-cHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-EEEEEccccccchHHHHHHHHHHHHhcCCC
Confidence 5555599988887655 33221 2222 22358889999999999998 777665433325677788888888888885
Q ss_pred eEEEeeecCCCCCCcccCCCCHHHHHHHHHHhCC
Q 022377 156 IRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKKFP 189 (298)
Q Consensus 156 ~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~~ 189 (298)
.+.+...-+.. .+....++++.+.+.++
T Consensus 167 --~i~l~DT~G~~----~P~~v~~lv~~l~~~~~ 194 (325)
T 3eeg_A 167 --VVNIPDTTGYM----LPWQYGERIKYLMDNVS 194 (325)
T ss_dssp --EEECCBSSSCC----CHHHHHHHHHHHHHHCS
T ss_pred --EEEecCccCCc----CHHHHHHHHHHHHHhCC
Confidence 33333332221 11235566777777775
No 23
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=96.37 E-value=0.034 Score=49.12 Aligned_cols=165 Identities=12% Similarity=0.112 Sum_probs=107.5
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEc-----CC-ccCc---cccHHHHHHHHhcc-CCCCcEEEEeC-c
Q 022377 2 PPEGVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLT-----GG-EPTV---RKDIEEACFHLSKL-KGLKTLAMTTN-G 70 (298)
Q Consensus 2 ~~~~~~~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~t-----GG-EPll---~~~~~~ii~~~~~~-~~~~~v~i~TN-G 70 (298)
+|+|.|. ....++.++..++++.+.+.|+..|-+. +| .|.. ..+-.+.++.+++. .+.. +.+.++ +
T Consensus 16 lRDG~Q~--~~~~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~-i~~l~~p~ 92 (345)
T 1nvm_A 16 LRDGSHA--IRHQYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQ-IATLLLPG 92 (345)
T ss_dssp TTHHHHH--TTTCCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSE-EEEEECBT
T ss_pred CCcccCC--CCCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCE-EEEEecCC
Confidence 3454444 3667999999999999999999999993 33 3322 22455677777653 3443 554432 3
Q ss_pred cchHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHh
Q 022377 71 LTLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTR 150 (298)
Q Consensus 71 ~ll~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~ 150 (298)
....+.++...++|++.+.|.+.. ++ .+.+.+.++.+++.|+ .+.....-....+.+.+.++++.+.
T Consensus 93 ~~~~~~i~~a~~aGvd~v~I~~~~-s~-----------~~~~~~~i~~ak~~G~-~v~~~~~~a~~~~~e~~~~ia~~~~ 159 (345)
T 1nvm_A 93 IGSVHDLKNAYQAGARVVRVATHC-TE-----------ADVSKQHIEYARNLGM-DTVGFLMMSHMIPAEKLAEQGKLME 159 (345)
T ss_dssp TBCHHHHHHHHHHTCCEEEEEEET-TC-----------GGGGHHHHHHHHHHTC-EEEEEEESTTSSCHHHHHHHHHHHH
T ss_pred cccHHHHHHHHhCCcCEEEEEEec-cH-----------HHHHHHHHHHHHHCCC-EEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 334667889999999999987532 21 1356677888889999 7766653344356788999999999
Q ss_pred hCCCeeEEEeeecCCCCCCcccCCCCHHHHHHHHHHhC
Q 022377 151 DRPINIRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKKF 188 (298)
Q Consensus 151 ~~g~~~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~ 188 (298)
+.|++ .+.+....+.. .+....++++.+++.+
T Consensus 160 ~~Ga~--~i~l~DT~G~~----~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 160 SYGAT--CIYMADSGGAM----SMNDIRDRMRAFKAVL 191 (345)
T ss_dssp HHTCS--EEEEECTTCCC----CHHHHHHHHHHHHHHS
T ss_pred HCCCC--EEEECCCcCcc----CHHHHHHHHHHHHHhc
Confidence 88875 33344332221 1123456667777766
No 24
>4fhd_A Spore photoproduct lyase; partial TIM-barrel, DNA repair, damaged DNA; HET: EEM 0TT; 2.00A {Geobacillus thermodenitrificans} PDB: 4fhc_A* 4fhg_A* 4fhe_A* 4fhf_A*
Probab=95.86 E-value=0.066 Score=47.51 Aligned_cols=130 Identities=10% Similarity=0.094 Sum_probs=81.8
Q ss_pred CCHHHHHHHHHH-HHhCCCC--EEEEc-CCccCccc---cH-HHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCC
Q 022377 15 LSLNEILRLAYL-FVTSGVD--KIRLT-GGEPTVRK---DI-EEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLT 86 (298)
Q Consensus 15 l~~e~~~~~i~~-~~~~~~~--~v~~t-GGEPll~~---~~-~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~ 86 (298)
.+.+++.+-+++ +.+.+.. .|.++ -.+|+.-. .+ .++++.+.+..+. .+++.|-+.+++. +..+...+..
T Consensus 140 vN~~eiL~~l~~~l~~~~~~~~~i~~g~~TDpyp~E~~~~ltr~~le~l~~~~~~-~v~i~TKs~lid~-L~~l~~~~~v 217 (368)
T 4fhd_A 140 VNLDDIFAQAQKYINERAPEITRFEAACTSDIVGIDHLTHSLKKAIEFIGATDYG-RLRFVTKYEHVDH-LLDARHNGKT 217 (368)
T ss_dssp CCHHHHHHHHHHHHHHHTTSCEEEESCSSBCHHHHHTTTCHHHHHHHHHHHCSSE-EEEEEESCCCCGG-GTTCCCTTCE
T ss_pred cCHHHHHHHHHHHHhhcCCCceEEEEEcCCCcchhhHHHhHHHHHHHHHHhCCCc-eEEEEeCCcCHHH-HHhcCcCCce
Confidence 446666554443 3333323 34343 26786211 13 4888888775455 4999999987753 3334344555
Q ss_pred eEEEecCCCCHHhhhhhcC-CCcHHHHHHHHHHHHHcCCCCEEEEE-EEecCCCH-hHHHHHHHHH
Q 022377 87 SVNISLDTLVPAKFEFLTR-RKGHEKVMESINAAIEVGYNPVKVNC-VVMRGFND-DEICDFVELT 149 (298)
Q Consensus 87 ~v~iSldg~~~~~~~~ir~-~~~~~~v~~~i~~l~~~g~~~v~i~~-vi~~~~n~-~~i~~i~~~~ 149 (298)
.|++||.. ++..+.+-. ..+.++-+++++.|.++|+ ++.+.+ -+.++.+. ++..++++.+
T Consensus 218 ~V~~Sitt--~~l~r~~EP~aps~~~RL~Ai~~l~~aGi-pv~v~iaPIiP~~~~~e~y~~lle~l 280 (368)
T 4fhd_A 218 RFRFSINS--RYVINHFEPGTSSFDGRLAAARKVAGAGY-KLGFVVAPIYRHEGWERGYFELFQEL 280 (368)
T ss_dssp EEEEEECC--HHHHHHHCTTSCCHHHHHHHHHHHHHTTC-EEEEEEEEECCCTTHHHHHHHHHHHH
T ss_pred EEEEEEcC--HHHHHHcCCCCCCHHHHHHHHHHHHHCCC-eEEEEEeCcCCCCCCHHHHHHHHHHH
Confidence 68889865 555555554 4569999999999999999 888876 66775554 3455555533
No 25
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=95.81 E-value=0.21 Score=45.84 Aligned_cols=156 Identities=13% Similarity=0.129 Sum_probs=106.2
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCc------cCccccHHHHHHHHhcc-CCCCcEEEEeCccc-----------hH
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGE------PTVRKDIEEACFHLSKL-KGLKTLAMTTNGLT-----------LA 74 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGE------Pll~~~~~~ii~~~~~~-~~~~~v~i~TNG~l-----------l~ 74 (298)
..|+.++..++++.+.+.|+..|-..||- .++.++-.+.++.+++. .+.. +.+.+.|.. .+
T Consensus 25 ~~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~~~~-l~~l~R~~N~~G~~~~~ddv~~ 103 (464)
T 2nx9_A 25 TRLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPNTP-LQMLLRGQNLLGYRHYADDVVD 103 (464)
T ss_dssp TCCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCSSSC-EEEEECGGGTTSSSCCCHHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCCCCe-EEEEeccccccCcccccchhhH
Confidence 46899999999999999999999997654 35677777777777652 4554 666665431 24
Q ss_pred hhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEE--EEecCCCHhHHHHHHHHHhhC
Q 022377 75 RKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNC--VVMRGFNDDEICDFVELTRDR 152 (298)
Q Consensus 75 ~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~--vi~~~~n~~~i~~i~~~~~~~ 152 (298)
..++...++|++.|.|.....+ .+.+.+.++.+++.|. .+...+ +.....+.+.+.++++.+.+.
T Consensus 104 ~~v~~a~~~Gvd~i~if~~~sd------------~~ni~~~i~~ak~~G~-~v~~~i~~~~~~~~~~e~~~~~a~~l~~~ 170 (464)
T 2nx9_A 104 TFVERAVKNGMDVFRVFDAMND------------VRNMQQALQAVKKMGA-HAQGTLCYTTSPVHNLQTWVDVAQQLAEL 170 (464)
T ss_dssp HHHHHHHHTTCCEEEECCTTCC------------THHHHHHHHHHHHTTC-EEEEEEECCCCTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCcCEEEEEEecCH------------HHHHHHHHHHHHHCCC-EEEEEEEeeeCCCCCHHHHHHHHHHHHHC
Confidence 4678888999999998754322 1467788999999998 775544 333335778888999989899
Q ss_pred CCeeEEEeeecCCCCCCcccCCCCHHHHHHHHHHhC
Q 022377 153 PINIRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKKF 188 (298)
Q Consensus 153 g~~~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~ 188 (298)
|++ .+.+...-+.. .+....++.+.+.+.+
T Consensus 171 Gad--~I~l~DT~G~~----~P~~v~~lv~~l~~~~ 200 (464)
T 2nx9_A 171 GVD--SIALKDMAGIL----TPYAAEELVSTLKKQV 200 (464)
T ss_dssp TCS--EEEEEETTSCC----CHHHHHHHHHHHHHHC
T ss_pred CCC--EEEEcCCCCCc----CHHHHHHHHHHHHHhc
Confidence 985 34444332221 1123456666666655
No 26
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=95.58 E-value=0.22 Score=46.46 Aligned_cols=156 Identities=13% Similarity=0.138 Sum_probs=106.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCc------cCccccHHHHHHHHhcc-CCCCcEEEEeCcc-----------chH
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGE------PTVRKDIEEACFHLSKL-KGLKTLAMTTNGL-----------TLA 74 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGE------Pll~~~~~~ii~~~~~~-~~~~~v~i~TNG~-----------ll~ 74 (298)
..|+.++..++++.+.+.|+..|-..||- .++.++-.+.++.+++. .+.. +.+.+-|. +.+
T Consensus 42 ~~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~~~~-l~~L~R~~N~~G~~~ypddv~~ 120 (539)
T 1rqb_A 42 TRMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMPNSR-LQMLLRGQNLLGYRHYNDEVVD 120 (539)
T ss_dssp TCCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCTTSC-EEEEECGGGTTSSSCCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCCCCE-EEEEeccccccCcccCcccccH
Confidence 46899999999999999999999998654 36677767777777652 4554 66665322 134
Q ss_pred hhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEE--EEecCCCHhHHHHHHHHHhhC
Q 022377 75 RKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNC--VVMRGFNDDEICDFVELTRDR 152 (298)
Q Consensus 75 ~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~--vi~~~~n~~~i~~i~~~~~~~ 152 (298)
+.++...++|++.|.|.....+ .+.+.+.++.+++.|. .+...+ +.....+.+.+.++++.+.+.
T Consensus 121 ~~ve~a~~aGvd~vrIf~s~sd------------~~ni~~~i~~ak~~G~-~v~~~i~~~~~~~~~~e~~~~~a~~l~~~ 187 (539)
T 1rqb_A 121 RFVDKSAENGMDVFRVFDAMND------------PRNMAHAMAAVKKAGK-HAQGTICYTISPVHTVEGYVKLAGQLLDM 187 (539)
T ss_dssp HHHHHHHHTTCCEEEECCTTCC------------THHHHHHHHHHHHTTC-EEEEEEECCCSTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCEEEEEEehhH------------HHHHHHHHHHHHHCCC-eEEEEEEeeeCCCCCHHHHHHHHHHHHHc
Confidence 5688899999999998744322 1567889999999998 775444 333335778888999988888
Q ss_pred CCeeEEEeeecCCCCCCcccCCCCHHHHHHHHHHhC
Q 022377 153 PINIRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKKF 188 (298)
Q Consensus 153 g~~~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~ 188 (298)
|++ .+.+...-+.. .+....++.+.+.+.+
T Consensus 188 Gad--~I~L~DT~G~~----~P~~v~~lv~~l~~~~ 217 (539)
T 1rqb_A 188 GAD--SIALKDMAALL----KPQPAYDIIKAIKDTY 217 (539)
T ss_dssp TCS--EEEEEETTCCC----CHHHHHHHHHHHHHHH
T ss_pred CCC--EEEeCCCCCCc----CHHHHHHHHHHHHHhc
Confidence 985 34444332221 1123456666776665
No 27
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=95.38 E-value=0.21 Score=42.62 Aligned_cols=128 Identities=16% Similarity=0.181 Sum_probs=94.6
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEc----CCccCccccH-HHHHHHHhcc-CCCCcEEEEeCccch---HhhHHHHHHc
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLT----GGEPTVRKDI-EEACFHLSKL-KGLKTLAMTTNGLTL---ARKLPKLKES 83 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~t----GGEPll~~~~-~~ii~~~~~~-~~~~~v~i~TNG~ll---~~~~~~l~~~ 83 (298)
-.+|++|+.+-..+..+.|...|.+. .|.|.+.++. .++++.+++. .++- +.++|.|... ++++..+ +.
T Consensus 29 lPvTpeEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~~IR~~~pd~i-i~~TTg~~~~~~~eeR~~~~-~~ 106 (282)
T 2y7e_A 29 LPITPEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAISAIREVVPEII-IQISTGGAVGESFDKRLAPL-AL 106 (282)
T ss_dssp CCCSHHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHHHHHHHCTTSE-EEECSSCSTTCCHHHHHGGG-GG
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHHCCCeE-EEeCCCCCCCCCHHHHHHHh-hc
Confidence 34899999988888888898888886 4889999984 5999999975 4784 9999976632 3455555 55
Q ss_pred CCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhh
Q 022377 84 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 151 (298)
Q Consensus 84 ~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~ 151 (298)
..+..++++-+.+ +....-..+++.+.+.++.+++.|+ .+++.+ ++...+..+..++.+
T Consensus 107 ~Pe~asl~~gs~N---f~~~v~~n~~~~~~~~~~~~~e~Gv-~pE~e~-----fd~g~l~~~~~l~~~ 165 (282)
T 2y7e_A 107 KPEMATLNAGTLN---FGDDIFINHPADIIRLAEAFKQYNV-VPEVEV-----YESGMVDAVARLIKK 165 (282)
T ss_dssp CCSEEEEECCCEE---ETTEEECCCHHHHHHHHHHHHHTTC-EEEEEE-----CSHHHHHHHHHHHHT
T ss_pred CCCEEEecccccc---cccccccCCHHHHHHHHHHHHHcCC-eEEEEE-----ECHHHHHHHHHHHHc
Confidence 6787777764432 2111123568999999999999999 777766 577888887777765
No 28
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=95.27 E-value=0.37 Score=41.70 Aligned_cols=135 Identities=12% Similarity=0.191 Sum_probs=94.7
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEc-----CCccCcccc-HHHHHHHHhccCCCCcEEEEeCccc-----hHhhHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLT-----GGEPTVRKD-IEEACFHLSKLKGLKTLAMTTNGLT-----LARKLPK 79 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~t-----GGEPll~~~-~~~ii~~~~~~~~~~~v~i~TNG~l-----l~~~~~~ 79 (298)
+.-.+|+||+.+-..+..+.|...|+++ -|.|.+.++ +.++++.+++..++- +.++|-|.. ..+.+..
T Consensus 25 P~lPvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~~d~i-I~~TTgg~~~~~~~~eeR~~~ 103 (314)
T 3lot_A 25 PYLPVTPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQSDVV-INVTTGGGGTLGIPVEERAKV 103 (314)
T ss_dssp TTSCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHHCCCE-EEECSSTTGGGTCCHHHHTTH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhcCCeE-EEeCCCCcCCCCCCHHHHHHH
Confidence 3456999999888888888898888886 278899987 559999998866874 888887652 2345555
Q ss_pred HHHcCCCeEEEecCCCCH------Hhh----------------hhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCC
Q 022377 80 LKESGLTSVNISLDTLVP------AKF----------------EFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGF 137 (298)
Q Consensus 80 l~~~~~~~v~iSldg~~~------~~~----------------~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~ 137 (298)
+.+...+..++++-+.+= +.+ +.+-. .+++.+.+.++.+++.|+ .+++.+ +
T Consensus 104 ~~~~~Pe~aSln~Gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~-N~~~~i~~~~~~~~e~Gi-~pE~e~-----f 176 (314)
T 3lot_A 104 VPALKPEIATFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEMTRDIVFR-NTFKDLEALSRIFKENDT-KPELEC-----Y 176 (314)
T ss_dssp HHHHCCSEEEEECCCEECBCTTHHHHCCCCSSTHHHHHHHHGGGCEEC-CCHHHHHHHHHHHHHHTC-EEEEEE-----C
T ss_pred HHhcCCceeeecCCCcccccccccccccccccccchhhcccCCCceec-CCHHHHHHHHHHHHHcCC-EEEEEE-----E
Confidence 555566766666532210 000 11111 368899999999999999 787766 5
Q ss_pred CHhHHHHHHHHHhhCCC
Q 022377 138 NDDEICDFVELTRDRPI 154 (298)
Q Consensus 138 n~~~i~~i~~~~~~~g~ 154 (298)
+...+..+..++.+ |+
T Consensus 177 d~g~l~~~~~l~~~-Gl 192 (314)
T 3lot_A 177 DIGQIYNTAFMFHE-GY 192 (314)
T ss_dssp SHHHHHHHHHHHHT-TC
T ss_pred CHHHHHHHHHHHHC-CC
Confidence 77888888777665 54
No 29
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=95.10 E-value=1.2 Score=36.98 Aligned_cols=130 Identities=17% Similarity=0.157 Sum_probs=94.0
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCcccc--HHHHHHHHhccCCCCcEEEEeCccch---------HhhHHHHHH
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKD--IEEACFHLSKLKGLKTLAMTTNGLTL---------ARKLPKLKE 82 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~--~~~ii~~~~~~~~~~~v~i~TNG~ll---------~~~~~~l~~ 82 (298)
-|++..+..+++.+..+ +..+.|.+|--.+.|. +.+.++.++++ ++ .+.|-|+++ ++.++..++
T Consensus 22 glg~~~~~d~Le~~g~y-ID~lKfg~Gt~~l~~~~~l~eki~l~~~~-gV---~v~~GGTl~E~~~~qg~~~~yl~~~k~ 96 (251)
T 1qwg_A 22 GLPPKFVEDYLKVCGDY-IDFVKFGWGTSAVIDRDVVKEKINYYKDW-GI---KVYPGGTLFEYAYSKGKFDEFLNECEK 96 (251)
T ss_dssp SCCHHHHHHHHHHHGGG-CSEEEECTTGGGGSCHHHHHHHHHHHHTT-TC---EEEECHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhhh-cceEEecCceeeecCHHHHHHHHHHHHHc-CC---eEECCcHHHHHHHHcCcHHHHHHHHHH
Confidence 38999999999887666 7899999999999987 77999999986 65 578889743 356788888
Q ss_pred cCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCH--------hHHHHHHHHHhhCCC
Q 022377 83 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFND--------DEICDFVELTRDRPI 154 (298)
Q Consensus 83 ~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~--------~~i~~i~~~~~~~g~ 154 (298)
.|++.|-|| ||.-+ -+.+.-.+.|+.+++.|+ .|...+ .. .+. .++.+.++...+.|+
T Consensus 97 lGf~~iEiS-~G~i~---------l~~~~~~~~I~~~~~~G~-~v~~Ev--G~-k~~~~~~~~~~~~~I~~~~~~LeAGA 162 (251)
T 1qwg_A 97 LGFEAVEIS-DGSSD---------ISLEERNNAIKRAKDNGF-MVLTEV--GK-KMPDKDKQLTIDDRIKLINFDLDAGA 162 (251)
T ss_dssp HTCCEEEEC-CSSSC---------CCHHHHHHHHHHHHHTTC-EEEEEE--CC-SSHHHHTTCCHHHHHHHHHHHHHHTC
T ss_pred cCCCEEEEC-CCccc---------CCHHHHHHHHHHHHHCCC-EEeeec--cc-cCCcccCCCCHHHHHHHHHHHHHCCC
Confidence 999999999 55321 246788889999999999 653333 22 222 344444444445687
Q ss_pred eeEEEeee
Q 022377 155 NIRFIEFM 162 (298)
Q Consensus 155 ~~~~~~~~ 162 (298)
....++-.
T Consensus 163 ~~ViiEar 170 (251)
T 1qwg_A 163 DYVIIEGR 170 (251)
T ss_dssp SEEEECCT
T ss_pred cEEEEeee
Confidence 65555433
No 30
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=95.03 E-value=0.32 Score=41.46 Aligned_cols=130 Identities=12% Similarity=0.075 Sum_probs=94.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEc----CCccCccccH-HHHHHHHhcc-CCCCcEEEEeCccch--HhhHHHHHHcC
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLT----GGEPTVRKDI-EEACFHLSKL-KGLKTLAMTTNGLTL--ARKLPKLKESG 84 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~t----GGEPll~~~~-~~ii~~~~~~-~~~~~v~i~TNG~ll--~~~~~~l~~~~ 84 (298)
-.+|+||+.+-..+..+.|...|+++ -|.|.+.++. .++++.+++. .++- +.++|.|... .+++..+ ...
T Consensus 29 lPvTpeEia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~pd~i-i~~TTgg~~~~~eeR~~~~-~~~ 106 (284)
T 3chv_A 29 VPITVSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMI-VQFSTGGRSGAGQARGGML-PLK 106 (284)
T ss_dssp CCCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCE-EEECCCTTTCCGGGGGTTG-GGC
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhCCCeE-EEeCCCCCCCCHHHHHHhh-hcC
Confidence 34899999988888888998888886 3889999984 5999999975 3784 9999976533 3455555 556
Q ss_pred CCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCC
Q 022377 85 LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPI 154 (298)
Q Consensus 85 ~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~ 154 (298)
.+..++++-+.+ +....-..+++.+.+.++.+++.|+ .+++.+ ++...+..+..++.+ |+
T Consensus 107 Pe~aSl~~Gs~N---f~~~v~~n~~~~~~~~~~~~~e~Gv-~pE~e~-----fd~g~l~~~~~l~~~-Gl 166 (284)
T 3chv_A 107 PDMASLSVGSNN---FPSRVYENPPDLVDWLAAQMRSYRV-TPEIEA-----FDLSHILRAIDMHGR-GL 166 (284)
T ss_dssp CSEEEECCSCEE---CSSSEECCCHHHHHHHHHHHHHHTC-EEEEEE-----SSHHHHHHHHHHHHT-TC
T ss_pred CCEEEecCcccc---cCCccccCCHHHHHHHHHHHHHcCC-EEEEEE-----ECHHHHHHHHHHHHc-CC
Confidence 787766664432 1111112468999999999999999 777766 577888887666654 54
No 31
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=94.95 E-value=0.55 Score=40.64 Aligned_cols=133 Identities=13% Similarity=0.136 Sum_probs=94.3
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEc-----CCccCccccH-HHHHHHHhcc-CCCCcEEEEeC------cc--------
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLT-----GGEPTVRKDI-EEACFHLSKL-KGLKTLAMTTN------GL-------- 71 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~t-----GGEPll~~~~-~~ii~~~~~~-~~~~~v~i~TN------G~-------- 71 (298)
-.+|++|+.+-..+..+.|...|.++ -|.|.+.++. .++++.+++. .++- +.++|. |.
T Consensus 43 lPvTpeEIa~~A~~a~~AGAaivHlHvRd~~~G~ps~d~~~y~e~~~~IR~~~~d~i-i~~TTg~gg~~~g~~~~p~~~~ 121 (316)
T 3c6c_A 43 MPITPAQIADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVDRVRSSGTDIV-LNLTCGLGAFLLPDPEDESKAL 121 (316)
T ss_dssp CCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHTTTCCCE-EEEECCCSEEECEETTEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHHCCCeE-EEeCCCccccccCcccCccccc
Confidence 34899999988888888898888885 3789998874 5999999985 5784 999996 43
Q ss_pred ------chHhhHHHHHHcCCCeEEEecCCCCH--HhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHH
Q 022377 72 ------TLARKLPKLKESGLTSVNISLDTLVP--AKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEIC 143 (298)
Q Consensus 72 ------ll~~~~~~l~~~~~~~v~iSldg~~~--~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~ 143 (298)
-.++++..+.....+..++++-+.+- ..-+.+- ..+++.+.+.++.+++.|+ .+++.+ ++...+.
T Consensus 122 ~~~~l~~~eeR~~~~~~~~Pe~aSl~~Gs~Nf~~~~~~~v~-~n~~~~i~~~~~~~~e~Gv-~pE~e~-----fd~g~l~ 194 (316)
T 3c6c_A 122 PESDVVPVAERVKHLEDCLPEIASLDITTGNQVEGKLEFVY-LNTTRTLRAMARRFQELGI-KPELEV-----FSPGDIL 194 (316)
T ss_dssp TTCEECCHHHHTHHHHHHCCSEEEEECCCEEEEETTEEEEE-CCCHHHHHHHHHHHHHHTC-EEEEEE-----SSHHHHH
T ss_pred cccccCCHHHHHHHHHhcCCCeEEeccccccccCCCCceee-cCCHHHHHHHHHHHHHcCC-eEEEEE-----ECHHHHH
Confidence 23445555544467877676554331 0001111 2568999999999999999 787766 5778887
Q ss_pred HHHHHHhhCCC
Q 022377 144 DFVELTRDRPI 154 (298)
Q Consensus 144 ~i~~~~~~~g~ 154 (298)
....++.+ |+
T Consensus 195 ~~~~l~~~-Gl 204 (316)
T 3c6c_A 195 FGKQLIEE-GL 204 (316)
T ss_dssp HHHHHHHT-TC
T ss_pred HHHHHHHc-CC
Confidence 77776654 44
No 32
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=94.52 E-value=0.46 Score=41.07 Aligned_cols=135 Identities=11% Similarity=0.182 Sum_probs=94.4
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEc-----CCccCccccHH-HHHHHHhccCCCCcEEEEeCccch---HhhHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLT-----GGEPTVRKDIE-EACFHLSKLKGLKTLAMTTNGLTL---ARKLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~t-----GGEPll~~~~~-~ii~~~~~~~~~~~v~i~TNG~ll---~~~~~~l~ 81 (298)
+.-.+|++|+.+-..+..+.|...|+++ -|.|.+.++.. ++++.+++..+.- +.++|-|... .+.+..+.
T Consensus 25 P~lPvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d~i-I~~TTgg~~~~~~eerla~~~ 103 (311)
T 3e49_A 25 PYLPVTPDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNTDAV-INLTTGGSPHMTVEERLRPAT 103 (311)
T ss_dssp TTSCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHCCCE-EEECSCSCTTSCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCCcE-EEECCCCCCCCCHHHHHHHHH
Confidence 3456999999888888888898888886 28899999754 9999998765663 7788876543 34666665
Q ss_pred HcCCCeEEEecCCCC------HHhhh----------------hhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCH
Q 022377 82 ESGLTSVNISLDTLV------PAKFE----------------FLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFND 139 (298)
Q Consensus 82 ~~~~~~v~iSldg~~------~~~~~----------------~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~ 139 (298)
....+..++++-+.+ .+.|+ .+- ..+++.+.+.++.+++.|+ .+++.+ ++.
T Consensus 104 ~~~Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~-~n~~~~i~~~~~~~~e~Gi-~pE~e~-----fd~ 176 (311)
T 3e49_A 104 HYMPELASLNMGSMNFGLYPMLERFKEFAHGWEREHLERSRDLVF-KNTFADIEFILKTCGGNGT-RFEFEC-----YDT 176 (311)
T ss_dssp HHCCSEEEEECSCEECCCGGGGGTCCCCSSHHHHHHHHGGGGCEE-CCCHHHHHHHHHHHHTTTC-EEEEEE-----CSH
T ss_pred hcCCCeeeecCCCcccccccchhhccccccccchhhcccCCCcee-cCCHHHHHHHHHHHHHcCC-eeEEEE-----ECH
Confidence 556776666643321 00111 111 1358889999999999999 787766 577
Q ss_pred hHHHHHHHHHhhCCC
Q 022377 140 DEICDFVELTRDRPI 154 (298)
Q Consensus 140 ~~i~~i~~~~~~~g~ 154 (298)
..+..+..++.+ |+
T Consensus 177 g~l~~~~~l~~~-Gl 190 (311)
T 3e49_A 177 SHLYNLAHFVDR-KL 190 (311)
T ss_dssp HHHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHHc-CC
Confidence 888887777665 54
No 33
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=94.41 E-value=0.42 Score=41.34 Aligned_cols=136 Identities=14% Similarity=0.227 Sum_probs=94.4
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEc-----CCccCccccHH-HHHHHHhccCCCCcEEEEeCccch---HhhHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLT-----GGEPTVRKDIE-EACFHLSKLKGLKTLAMTTNGLTL---ARKLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~t-----GGEPll~~~~~-~ii~~~~~~~~~~~v~i~TNG~ll---~~~~~~l~ 81 (298)
+.-.+|++|+.+-..+..+.|...|+++ -|.|.+.++.. ++++.+++..+.- +.++|-|... .+.+..+.
T Consensus 25 P~lPvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d~i-I~~TTgg~~~~~~eerla~~~ 103 (311)
T 3e02_A 25 PYLPITPEEIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKERTDAI-LNITTGGGLGMSLDERLAPAR 103 (311)
T ss_dssp TTSCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHHCCCE-EEECSSCSTTCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCCcE-EEECCCCCCCCCHHHHHHHHH
Confidence 3456999999888888888898888886 28899999754 9999998765663 7788876543 34666665
Q ss_pred HcCCCeEEEecCCCCH------Hhhhhh------------cC---CCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHh
Q 022377 82 ESGLTSVNISLDTLVP------AKFEFL------------TR---RKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDD 140 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~------~~~~~i------------r~---~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~ 140 (298)
....+..++++-+.+- +.|+.. +. ..+++.+.+.++.+++.|+ .+++.+ ++..
T Consensus 104 ~~~Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~d~v~~n~~~~i~~~~~~~~e~Gi-~pE~e~-----fd~g 177 (311)
T 3e02_A 104 AARPEVASMNMGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGMTELGASGT-RFEFEC-----YDVG 177 (311)
T ss_dssp HHCCSEEEEECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCCHHHHHHHHHHHHTTTC-EEEEEE-----CSHH
T ss_pred hcCCCeeeecCCCceeccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCC-eEEEEE-----EcHH
Confidence 5567766666333210 111111 01 2358889999999999999 787766 5778
Q ss_pred HHHHHHHHHhhCCC
Q 022377 141 EICDFVELTRDRPI 154 (298)
Q Consensus 141 ~i~~i~~~~~~~g~ 154 (298)
.+..+..++.+ |+
T Consensus 178 ~l~~~~~l~~~-Gl 190 (311)
T 3e02_A 178 HLYNLAHFVDR-KL 190 (311)
T ss_dssp HHHHHHHHHHT-TS
T ss_pred HHHHHHHHHHc-CC
Confidence 88887777665 54
No 34
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=94.18 E-value=1.8 Score=36.42 Aligned_cols=129 Identities=13% Similarity=0.075 Sum_probs=88.6
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch---------HhhHHHHHHcC
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL---------ARKLPKLKESG 84 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll---------~~~~~~l~~~~ 84 (298)
-|++..+..+++.+..+ +..+.|.+|--.+.|.+.+.++.++++ ++ .+.|-|+++ ++.++..++.|
T Consensus 49 glg~~~~~DlLe~ag~y-ID~lKfg~GTs~l~~~l~ekI~l~~~~-gV---~v~~GGTlfE~~l~qg~~~~yl~~~k~lG 123 (276)
T 1u83_A 49 GYPLQFFKDAIAGASDY-IDFVKFGWGTSLLTKDLEEKISTLKEH-DI---TFFFGGTLFEKYVSQKKVNEFHRYCTYFG 123 (276)
T ss_dssp SCCHHHHHHHHHHHGGG-CCEEEECTTGGGGCTTHHHHHHHHHHT-TC---EEEECHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhhhh-cceEEecCcchhhhHHHHHHHHHHHHc-CC---eEeCCcHHHHHHHHcCcHHHHHHHHHHcC
Confidence 38999999999987766 789999999999999988999999986 65 578899754 34578888899
Q ss_pred CCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEec-------CCCHhHHHHHHHHHhhCCCeeE
Q 022377 85 LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMR-------GFNDDEICDFVELTRDRPINIR 157 (298)
Q Consensus 85 ~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~-------~~n~~~i~~i~~~~~~~g~~~~ 157 (298)
++.|-|| ||.-+ -+.+.-.+.|+.+++. + .|...+ -. -....++.+.++...+.|+...
T Consensus 124 F~~IEIS-dGti~---------l~~~~~~~lI~~a~~~-f-~Vl~Ev--G~K~~~~~~~~~~~~~I~~~~~dLeAGA~~V 189 (276)
T 1u83_A 124 CEYIEIS-NGTLP---------MTNKEKAAYIADFSDE-F-LVLSEV--GSKDAELASRQSSEEWLEYIVEDMEAGAEKV 189 (276)
T ss_dssp CSEEEEC-CSSSC---------CCHHHHHHHHHHHTTT-S-EEEEEC--SCCC------CCSTHHHHHHHHHHHHTEEEE
T ss_pred CCEEEEC-CCccc---------CCHHHHHHHHHHHHhh-c-EEeeec--cccCccccCCCCHHHHHHHHHHHHHCCCcEE
Confidence 9999999 55321 2356666777777666 5 332222 11 0122444455554555677554
Q ss_pred EEee
Q 022377 158 FIEF 161 (298)
Q Consensus 158 ~~~~ 161 (298)
.++-
T Consensus 190 iiEa 193 (276)
T 1u83_A 190 ITEA 193 (276)
T ss_dssp EEC-
T ss_pred EEee
Confidence 4433
No 35
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=93.84 E-value=0.68 Score=39.30 Aligned_cols=130 Identities=12% Similarity=0.076 Sum_probs=91.4
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEc----CCccCcccc-HHHHHHHHhccC-CCCcEEEEeCccch--HhhHHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLT----GGEPTVRKD-IEEACFHLSKLK-GLKTLAMTTNGLTL--ARKLPKLKE 82 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~t----GGEPll~~~-~~~ii~~~~~~~-~~~~v~i~TNG~ll--~~~~~~l~~ 82 (298)
+.-.+|+||+.+-..+..+.|...|+++ -|.|.+.++ +.++++.+++.. ++- +.++|-|..- +++ ..+.+
T Consensus 23 P~lPvTpeEia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~~~~IR~~~pd~i-i~~Ttg~~~~~~e~R-~~~~~ 100 (275)
T 3no5_A 23 PAVPITVSEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGMI-TQVSTGGRSGAGNER-GAMLS 100 (275)
T ss_dssp TTSCCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCE-EEECCCCCTTCCGGG-GTTGG
T ss_pred CCCCCCHHHHHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHhCCCeE-EEeCCCCCCCCHHHH-hhHhh
Confidence 3446999999988888888898888886 389999997 559999998753 774 8888876432 233 33334
Q ss_pred cCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhh
Q 022377 83 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 151 (298)
Q Consensus 83 ~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~ 151 (298)
...+..++++-+.+ ..+.+- ..+++.+.+.++.+++.|+ .+++.+ ++...+..+..++.+
T Consensus 101 ~~Pe~aSl~~gs~N--f~~~v~-~N~~~~~~~~~~~~~e~Gi-~pE~e~-----fd~g~l~~~~~l~~~ 160 (275)
T 3no5_A 101 LRPDMASLATGSVN--FPTRVY-DNPPELVDWLAAEMKTYGI-KPEVEA-----FDLSMIFQAAAMQAA 160 (275)
T ss_dssp GCCSEEEEECSCEE--CSSSEE-CCCHHHHHHHHHHHHHTTC-EEEEEE-----SSTHHHHHHHHHHHH
T ss_pred cCCCEEEecCcccc--cccccc-cCCHHHHHHHHHHHHHcCC-eeEEEE-----EcHHHHHHHHHHHHC
Confidence 45676766654322 111111 2468899999999999999 777666 567788777777765
No 36
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=93.05 E-value=0.31 Score=42.42 Aligned_cols=112 Identities=14% Similarity=0.134 Sum_probs=73.5
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEc----CCc-----cCccccHHHHHHHHhccCCCCcEEEEeCccch
Q 022377 3 PEGVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLT----GGE-----PTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 73 (298)
Q Consensus 3 ~~~~~~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~t----GGE-----Pll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll 73 (298)
|+|.|.. +..++.++..++++.+.+.|+..|-.. ||. |-+.+ .+.++.+++.++.. +.+.+.|...
T Consensus 11 RDG~Qs~--~~~~~~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~--~e~l~~i~~~~~~~-~~~L~r~~~~ 85 (320)
T 3dxi_A 11 RDGGYYT--NWDFNSKIVDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTP--VSVLKHLRNISTKK-IAIMLNEKNT 85 (320)
T ss_dssp HHHGGGG--TTCCCHHHHHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCC--HHHHHHHHHHCCSE-EEEEEEGGGC
T ss_pred CccccCC--CCcCCHHHHHHHHHHHHHhCCCEEEEecccCCccccccccccCh--HHHHHHHhhccCCe-EEEEecCCCC
Confidence 4555553 678999999999999999999887776 554 22222 34445554445664 6666544321
Q ss_pred -HhhHHHH---HHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEE
Q 022377 74 -ARKLPKL---KESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCV 132 (298)
Q Consensus 74 -~~~~~~l---~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~v 132 (298)
.+.++.+ ..+|++.+.|..+- ...+.+.+.++.+++.|+ .+.....
T Consensus 86 ~~~dv~~~~~a~~~Gvd~~ri~~~~------------~nle~~~~~v~~ak~~G~-~v~~~~~ 135 (320)
T 3dxi_A 86 TPEDLNHLLLPIIGLVDMIRIAIDP------------QNIDRAIVLAKAIKTMGF-EVGFNVM 135 (320)
T ss_dssp CGGGHHHHHGGGTTTCSEEEEEECG------------GGHHHHHHHHHHHHTTTC-EEEEEEC
T ss_pred ChhhHHHHHHhhhcCCCEEEEEecH------------HHHHHHHHHHHHHHHCCC-EEEEEEE
Confidence 2233333 23689988888422 137889999999999999 7765553
No 37
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=90.79 E-value=6.3 Score=33.50 Aligned_cols=23 Identities=9% Similarity=0.264 Sum_probs=11.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEE
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRL 37 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~ 37 (298)
-+++++.++++.+.+.|+..|.+
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l 174 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSL 174 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEe
Confidence 34455555555555555554444
No 38
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=90.00 E-value=4.2 Score=39.19 Aligned_cols=106 Identities=14% Similarity=0.150 Sum_probs=71.1
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcC-------------C------ccCccccHHHHHHHHhccCCCCcEE--EEeCccc
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTG-------------G------EPTVRKDIEEACFHLSKLKGLKTLA--MTTNGLT 72 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tG-------------G------EPll~~~~~~ii~~~~~~~~~~~v~--i~TNG~l 72 (298)
-++.+..++.|+.+.+.|...|.+-| | .|.-..|+.++++|+++ +|+. +. ..|+|..
T Consensus 367 g~nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~s-KGV~-iilw~~t~~~~ 444 (738)
T 2d73_A 367 SANTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAAR-KGIK-MMMHHETSASV 444 (738)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHH-TTCE-EEEEEECTTBH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHh-CCCE-EEEEEcCCCch
Confidence 38999999999999999999999811 1 23333458999999999 5875 55 4566621
Q ss_pred ------hHhhHHHHHHcCCCeEEEecCC---CCHHhhhhhcCCCcHHHHHHHHHHHHHcCC
Q 022377 73 ------LARKLPKLKESGLTSVNISLDT---LVPAKFEFLTRRKGHEKVMESINAAIEVGY 124 (298)
Q Consensus 73 ------l~~~~~~l~~~~~~~v~iSldg---~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~ 124 (298)
+++.+..+.+.|+..|-+..=| ...+.|+... .-+-..+.++.+.++++
T Consensus 445 ~n~e~~~d~~f~~~~~~Gv~GVKvdF~g~~~~r~~~h~~Q~---~v~~Y~~i~~~AA~~~L 502 (738)
T 2d73_A 445 RNYERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQW---MNNHYLYAVKKAADYKI 502 (738)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECCSSCBSTTCCTTSHH---HHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHHcCCCEEEeCccccCcCCcccccchH---HHHHHHHHHHHHHHcCc
Confidence 3456788899999998888775 2222221111 13444556666667665
No 39
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=89.15 E-value=14 Score=35.73 Aligned_cols=157 Identities=12% Similarity=0.113 Sum_probs=101.0
Q ss_pred CCCCHHHHHHHHHHHHhC--CCCEEEEcCCc------cCccccHHHHHHHHhc-cCCCCcEEEEeCcc---c--------
Q 022377 13 QLLSLNEILRLAYLFVTS--GVDKIRLTGGE------PTVRKDIEEACFHLSK-LKGLKTLAMTTNGL---T-------- 72 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~--~~~~v~~tGGE------Pll~~~~~~ii~~~~~-~~~~~~v~i~TNG~---l-------- 72 (298)
..|+.++..++++.+.+. |+..|-..||- |++..+=.+.++.+++ .++.. +.+...|. -
T Consensus 120 ~r~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~e~l~~l~~~~~~~~-l~~l~R~~n~vgy~~~p~~~ 198 (718)
T 3bg3_A 120 TRVRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQELRELIPNIP-FQMLLRGANAVGYTNYPDNV 198 (718)
T ss_dssp TCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCSSSC-EEEEECGGGTTSSSCCCHHH
T ss_pred cCCCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCHHHHHHHHHHHcccch-HHHHhcccccccccccCCcc
Confidence 358999999999999998 46678887664 4776553444444433 23443 66666442 1
Q ss_pred hHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEe-----c---CCCHhHHHH
Q 022377 73 LARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVM-----R---GFNDDEICD 144 (298)
Q Consensus 73 l~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~-----~---~~n~~~i~~ 144 (298)
..+.++...++|++.|.|.. +.+ ..+.+...++.+++.|. .+.....++ + ..+.+.+.+
T Consensus 199 ~~~~i~~a~~~Gvd~irIf~-s~n-----------~l~~l~~~i~~ak~~G~-~v~~~i~~~~d~~dp~r~~~~~e~~~~ 265 (718)
T 3bg3_A 199 VFKFCEVAKENGMDVFRVFD-SLN-----------YLPNMLLGMEAAGSAGG-VVEAAISYTGDVADPSRTKYSLQYYMG 265 (718)
T ss_dssp HHHHHHHHHHHTCCEEEEEC-SSC-----------CHHHHHHHHHHHHTTTS-EEEEEEECCSCTTCTTCCTTCHHHHHH
T ss_pred hHHHHHHHHhcCcCEEEEEe-cHH-----------HHHHHHHHHHHHHHcCC-eEEEEEEeeccccCCCCCCCCHHHHHH
Confidence 24567888899999988874 322 25677788888999987 776555444 1 136677888
Q ss_pred HHHHHhhCCCeeEEEeeecCCCCCCcccCCCCHHHHHHHHHHhCC
Q 022377 145 FVELTRDRPINIRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKKFP 189 (298)
Q Consensus 145 i~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~~ 189 (298)
+++.+.+.|++ .+.+....+.. .+....++.+.+.+.++
T Consensus 266 ~a~~l~~~Ga~--~I~l~DT~G~~----~P~~v~~lV~~lk~~~p 304 (718)
T 3bg3_A 266 LAEELVRAGTH--ILCIKDMAGLL----KPTACTMLVSSLRDRFP 304 (718)
T ss_dssp HHHHHHHHTCS--EEEEECTTSCC----CHHHHHHHHHHHHHHST
T ss_pred HHHHHHHcCCC--EEEEcCcCCCc----CHHHHHHHHHHHHHhCC
Confidence 88888888885 33333332211 11234566777777664
No 40
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=88.85 E-value=2.9 Score=39.69 Aligned_cols=144 Identities=10% Similarity=0.036 Sum_probs=85.9
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhcc----CCCCcEEEEeCcc--chHh
Q 022377 2 PPEGVDLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKL----KGLKTLAMTTNGL--TLAR 75 (298)
Q Consensus 2 ~~~~~~~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~----~~~~~v~i~TNG~--ll~~ 75 (298)
+|+|.|.. ...|+.++-.++++.|.++|+..|-..- |-..+.-.+.++.+.+. .+.. +...+-.. .++.
T Consensus 79 LRDGeQ~~--g~~~s~eeKl~Ia~~L~~lGVd~IEaGf--P~asp~D~e~v~~i~~~~l~~~~~~-i~aL~r~~~~did~ 153 (644)
T 3hq1_A 79 LRDGNQAL--IDPMSPARKRRMFDLLVRMGYKEIEVGF--PSASQTDFDFVREIIEQGAIPDDVT-IQVLTQCRPELIER 153 (644)
T ss_dssp CCCCGGGC--SSCCCHHHHHHHHHHHHHHTCSEEEEEC--TTTCHHHHHHHHHHHHTTCSCTTCE-EEEEEESCHHHHHH
T ss_pred CCccccCC--CCCCCHHHHHHHHHHHHHcCCCEEEEeC--CCCChhHHHHHHHHHhcCCCCCCeE-EEEEecCCHhhHHH
Confidence 35554443 5679999999999999999998876533 88877655666666553 1332 44333221 1244
Q ss_pred hHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCc----HHHHHHHHHHHHHcCCC--CEEEEEEEec----CCCHhHHHHH
Q 022377 76 KLPKLKESGLTSVNISLDTLVPAKFEFLTRRKG----HEKVMESINAAIEVGYN--PVKVNCVVMR----GFNDDEICDF 145 (298)
Q Consensus 76 ~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~----~~~v~~~i~~l~~~g~~--~v~i~~vi~~----~~n~~~i~~i 145 (298)
.++.++.++.+.|.+.+-.. +.|....-+.+ ++.+.+.++.+++++.. .+.+.+.+.. ..+.+.+.++
T Consensus 154 a~eal~~a~~~~Vhif~stS--d~h~~~~l~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasrtd~dfl~ev 231 (644)
T 3hq1_A 154 TFQACSGAPRAIVHFYNSTS--ILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTGTELEYAKQV 231 (644)
T ss_dssp HHHHHTTCSEEEEEEEEECC--HHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEETGGGSCHHHHHHH
T ss_pred HHHHHhcCCCCEEEEEecCC--HHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcccCCCCHHHHHHH
Confidence 56667777888888887763 33433322233 55555666666654321 2233333332 1466777788
Q ss_pred HHHHhhC
Q 022377 146 VELTRDR 152 (298)
Q Consensus 146 ~~~~~~~ 152 (298)
++.+.+.
T Consensus 232 ~~aa~ea 238 (644)
T 3hq1_A 232 CDAVGEV 238 (644)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8877764
No 41
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=88.39 E-value=11 Score=32.13 Aligned_cols=122 Identities=12% Similarity=0.039 Sum_probs=71.5
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc---CCccCcccc-HHHHHHHHhccC-CCCcEEEEe-Cccch-HhhHHHHHHcCCC
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLT---GGEPTVRKD-IEEACFHLSKLK-GLKTLAMTT-NGLTL-ARKLPKLKESGLT 86 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~t---GGEPll~~~-~~~ii~~~~~~~-~~~~v~i~T-NG~ll-~~~~~~l~~~~~~ 86 (298)
.-+++.+.++++.+.+.|+..|.+. |. +.|. ..++++.+++.. ++. +.+.+ |.+-+ ......-.++|++
T Consensus 155 ~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~---~~P~~~~~lv~~l~~~~~~~~-l~~H~Hn~~Gla~An~laAv~aGa~ 230 (302)
T 2ftp_A 155 DVDPRQVAWVARELQQMGCYEVSLGDTIGV---GTAGATRRLIEAVASEVPRER-LAGHFHDTYGQALANIYASLLEGIA 230 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEESSSC---CCHHHHHHHHHHHTTTSCGGG-EEEEEBCTTSCHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCC---cCHHHHHHHHHHHHHhCCCCe-EEEEeCCCccHHHHHHHHHHHhCCC
Confidence 4677778888887778887777774 43 4454 447777776643 353 66664 22222 2333344456888
Q ss_pred eEEEecCCCCHHhhhhh-cCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhh
Q 022377 87 SVNISLDTLVPAKFEFL-TRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 151 (298)
Q Consensus 87 ~v~iSldg~~~~~~~~i-r~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~ 151 (298)
.|..|+.|..+=-|..= .|....+.++..++. .|+ .. +.+.+.+.++.+++.+
T Consensus 231 ~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~---~g~-~~--------~idl~~l~~~~~~~~~ 284 (302)
T 2ftp_A 231 VFDSSVAGLGGCPYAKGATGNVASEDVLYLLNG---LEI-HT--------GVDMHALVDAGQRICA 284 (302)
T ss_dssp EEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHH---TTC-BC--------CCCHHHHHHHHHHHHH
T ss_pred EEEecccccCCCCCCCCCCCChhHHHHHHHHHh---cCC-CC--------CcCHHHHHHHHHHHHH
Confidence 88888887754223222 233346666655553 455 32 3567777777776654
No 42
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=88.32 E-value=8.8 Score=32.69 Aligned_cols=110 Identities=14% Similarity=0.153 Sum_probs=73.7
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 21 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvp-viaGvg~~~t~~ai~la~~a~ 99 (297)
T 3flu_A 21 QDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVP-VIAGTGANNTVEAIALSQAAE 99 (297)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSC-EEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCc-EEEeCCCcCHHHHHHHHHHHH
Confidence 45689999999999999999999999987 99 777665 33555554431 2343 555555544543 456677
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 131 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 131 (298)
+.|.+.+.+.--.+ + ..+-+.+.+-.+.+.++ ++ ++.+.-
T Consensus 100 ~~Gadavlv~~P~y----~-----~~~~~~l~~~f~~va~a~~l-PiilYn 140 (297)
T 3flu_A 100 KAGADYTLSVVPYY----N-----KPSQEGIYQHFKTIAEATSI-PMIIYN 140 (297)
T ss_dssp HTTCSEEEEECCCS----S-----CCCHHHHHHHHHHHHHHCCS-CEEEEE
T ss_pred HcCCCEEEECCCCC----C-----CCCHHHHHHHHHHHHHhCCC-CEEEEE
Confidence 78999887764332 1 13456777777777764 66 665543
No 43
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=88.06 E-value=8.6 Score=33.12 Aligned_cols=110 Identities=11% Similarity=0.166 Sum_probs=73.0
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 36 ~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvp-ViaGvg~~st~~ai~la~~A~ 114 (315)
T 3si9_A 36 DNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVP-VVAGAGSNSTSEAVELAKHAE 114 (315)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSC-BEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCc-EEEeCCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999887 99 777654 33555544431 2343 555555444543 456677
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 131 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 131 (298)
+.|.+.+.+---.+ + ..+-+.+.+-.+.+.++ ++ ++.+.-
T Consensus 115 ~~Gadavlv~~P~y----~-----~~~~~~l~~~f~~va~a~~l-PiilYn 155 (315)
T 3si9_A 115 KAGADAVLVVTPYY----N-----RPNQRGLYTHFSSIAKAISI-PIIIYN 155 (315)
T ss_dssp HTTCSEEEEECCCS----S-----CCCHHHHHHHHHHHHHHCSS-CEEEEE
T ss_pred hcCCCEEEECCCCC----C-----CCCHHHHHHHHHHHHHcCCC-CEEEEe
Confidence 78999877764322 1 13456777777777664 66 665543
No 44
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=87.46 E-value=8.6 Score=33.09 Aligned_cols=109 Identities=20% Similarity=0.214 Sum_probs=73.4
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 38 ~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvp-ViaGvg~~~t~~ai~la~~A~ 116 (315)
T 3na8_A 38 ADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVP-TIVSVSDLTTAKTVRRAQFAE 116 (315)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSC-BEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEecCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999987 99 888764 33555554431 2343 555555444543 456667
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
+.|.+.+.+---.+ + ..+-+.+.+-++.+.++ ++ ++.+.
T Consensus 117 ~~Gadavlv~~P~y----~-----~~s~~~l~~~f~~va~a~~l-PiilY 156 (315)
T 3na8_A 117 SLGAEAVMVLPISY----W-----KLNEAEVFQHYRAVGEAIGV-PVMLY 156 (315)
T ss_dssp HTTCSEEEECCCCS----S-----CCCHHHHHHHHHHHHHHCSS-CEEEE
T ss_pred hcCCCEEEECCCCC----C-----CCCHHHHHHHHHHHHHhCCC-cEEEE
Confidence 78999877754332 1 13457777878777764 66 66544
No 45
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=86.99 E-value=7.2 Score=33.87 Aligned_cols=108 Identities=11% Similarity=0.137 Sum_probs=72.0
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..|.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 48 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvp-ViaGvg~~st~eai~la~~A~ 126 (332)
T 2r8w_A 48 EAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRT-LMAGIGALRTDEAVALAKDAE 126 (332)
T ss_dssp TTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSE-EEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEecCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999987 99 677664 33555554432 2343 554555544543 456666
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKV 129 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i 129 (298)
+.|.+.+.+.--.+ . ..+-+.+.+-.+.+.++ ++ ++.+
T Consensus 127 ~~Gadavlv~~P~Y-----~----~~s~~~l~~~f~~VA~a~~l-Piil 165 (332)
T 2r8w_A 127 AAGADALLLAPVSY-----T----PLTQEEAYHHFAAVAGATAL-PLAI 165 (332)
T ss_dssp HHTCSEEEECCCCS-----S----CCCHHHHHHHHHHHHHHCSS-CEEE
T ss_pred hcCCCEEEECCCCC-----C----CCCHHHHHHHHHHHHHhcCC-CEEE
Confidence 77999887764332 1 13457777777777664 66 6654
No 46
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=86.97 E-value=13 Score=31.50 Aligned_cols=110 Identities=11% Similarity=0.143 Sum_probs=74.8
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+...| || |.|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 17 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~p-viaGvg~~~t~~ai~la~~A~ 95 (294)
T 3b4u_A 17 TDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSR-IVTGVLVDSIEDAADQSAEAL 95 (294)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGG-EEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEeCCCccHHHHHHHHHHHH
Confidence 45789999999999999999999999987 99 888765 44666665542 1343 555555544543 456667
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc----CCCCEEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV----GYNPVKVN 130 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~----g~~~v~i~ 130 (298)
+.|.+.+.+.--.+ + + ..+-+.+.+-.+.+.++ ++ ++.+.
T Consensus 96 ~~Gadavlv~~P~y----~-~---~~s~~~l~~~f~~va~a~p~~~l-PiilY 139 (294)
T 3b4u_A 96 NAGARNILLAPPSY----F-K---NVSDDGLFAWFSAVFSKIGKDAR-DILVY 139 (294)
T ss_dssp HTTCSEEEECCCCS----S-C---SCCHHHHHHHHHHHHHHHCTTCC-CEEEE
T ss_pred hcCCCEEEEcCCcC----C-C---CCCHHHHHHHHHHHHHhcCCCCC-cEEEE
Confidence 78999887764332 1 1 13567777777777764 67 76553
No 47
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=86.73 E-value=8 Score=32.88 Aligned_cols=109 Identities=17% Similarity=0.223 Sum_probs=73.0
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhccCCCCcEEEEeCccchHh---hHHHHHHc
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTLAR---KLPKLKES 83 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll~~---~~~~l~~~ 83 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+..+ . +-.-+.+..+.+ ..+...+.
T Consensus 13 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~-g-viaGvg~~~t~~ai~la~~A~~~ 90 (293)
T 1w3i_A 13 KDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTN-K-IIFQVGGLNLDDAIRLAKLSKDF 90 (293)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCS-C-EEEECCCSCHHHHHHHHHHGGGS
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcC-C-EEEecCCCCHHHHHHHHHHHHhc
Confidence 45789999999999999999999999987 99 888765 5588887776322 1 333344434444 34555567
Q ss_pred CCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 84 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 84 ~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
|.+.+.+.--.+. + ..+-+.+.+-.+.+.++ ++ ++.+.
T Consensus 91 Gadavlv~~P~y~-----~---~~s~~~l~~~f~~va~a~~l-PiilY 129 (293)
T 1w3i_A 91 DIVGIASYAPYYY-----P---RMSEKHLVKYFKTLCEVSPH-PVYLY 129 (293)
T ss_dssp CCSEEEEECCCSC-----S---SCCHHHHHHHHHHHHHHCSS-CEEEE
T ss_pred CCCEEEEcCCCCC-----C---CCCHHHHHHHHHHHHhhCCC-CEEEE
Confidence 9998877743321 1 03556777777777664 66 66543
No 48
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=86.68 E-value=14 Score=31.52 Aligned_cols=109 Identities=16% Similarity=0.172 Sum_probs=72.9
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 30 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvp-viaGvg~~st~~ai~la~~A~ 108 (304)
T 3cpr_A 30 ESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAK-LIAGVGTNNTRTSVELAEAAA 108 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSE-EEEECCCSCHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCc-EEecCCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999987 99 677664 33555554432 2343 555555544544 456667
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
+.|.+.+.+.--.+ . ..+-+.+.+-.+.+.++ ++ ++.+.
T Consensus 109 ~~Gadavlv~~P~y-----~----~~~~~~l~~~f~~ia~a~~l-PiilY 148 (304)
T 3cpr_A 109 SAGADGLLVVTPYY-----S----KPSQEGLLAHFGAIAAATEV-PICLY 148 (304)
T ss_dssp HTTCSEEEEECCCS-----S----CCCHHHHHHHHHHHHHHCCS-CEEEE
T ss_pred hcCCCEEEECCCCC-----C----CCCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 78999887774332 1 13457777777777664 66 66553
No 49
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=86.65 E-value=15 Score=31.92 Aligned_cols=108 Identities=12% Similarity=0.162 Sum_probs=71.8
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..|.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 45 ~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvp-ViaGvg~~st~eai~la~~A~ 123 (343)
T 2v9d_A 45 ADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVP-VLIGTGGTNARETIELSQHAQ 123 (343)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSC-EEEECCSSCHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEecCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999877 99 888765 33555554432 2453 655555555544 345566
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKV 129 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i 129 (298)
+.|.+.+.+.--.+. ..+-+.+.+-.+.+.++ ++ ++.+
T Consensus 124 ~~Gadavlv~~P~Y~---------~~s~~~l~~~f~~VA~a~~l-Piil 162 (343)
T 2v9d_A 124 QAGADGIVVINPYYW---------KVSEANLIRYFEQVADSVTL-PVML 162 (343)
T ss_dssp HHTCSEEEEECCSSS---------CCCHHHHHHHHHHHHHTCSS-CEEE
T ss_pred hcCCCEEEECCCCCC---------CCCHHHHHHHHHHHHHhcCC-CEEE
Confidence 779998887744321 12456667777666664 55 5544
No 50
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=85.96 E-value=4.8 Score=34.59 Aligned_cols=132 Identities=14% Similarity=0.131 Sum_probs=81.9
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 22 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvp-viaGvg~~~t~~ai~la~~A~ 100 (309)
T 3fkr_A 22 DTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVP-VIVTTSHYSTQVCAARSLRAQ 100 (309)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSC-EEEECCCSSHHHHHHHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCc-EEEecCCchHHHHHHHHHHHH
Confidence 45689999999999999999999999987 99 777765 33555554432 2453 555555544543 456667
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHH-cCCCCEEEEEEEecCCCHhHHHHHHHHHhh
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIE-VGYNPVKVNCVVMRGFNDDEICDFVELTRD 151 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~-~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~ 151 (298)
+.|.+.+.+-- | .|... ...+-+.+.+-.+.+.+ .++ ++.+.-+-..|.+.. .+.+.+++.+
T Consensus 101 ~~Gadavlv~~----P-yy~~~-~~~s~~~l~~~f~~va~a~~l-PiilYn~P~tg~~l~-~~~~~~La~~ 163 (309)
T 3fkr_A 101 QLGAAMVMAMP----P-YHGAT-FRVPEAQIFEFYARVSDAIAI-PIMVQDAPASGTALS-APFLARMARE 163 (309)
T ss_dssp HTTCSEEEECC----S-CBTTT-BCCCHHHHHHHHHHHHHHCSS-CEEEEECGGGCCCCC-HHHHHHHHHH
T ss_pred HcCCCEEEEcC----C-CCccC-CCCCHHHHHHHHHHHHHhcCC-CEEEEeCCCCCCCCC-HHHHHHHHhh
Confidence 78999777653 2 22110 12356777777777776 467 665533211244433 3445555544
No 51
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=85.83 E-value=16 Score=31.34 Aligned_cols=109 Identities=13% Similarity=0.120 Sum_probs=73.5
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+...| || |+|..+ -.++++.+.+. ..+. +-.-+.+ .+.+ ..+...
T Consensus 26 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvp-ViaGvg~-st~~ai~la~~A~ 103 (314)
T 3d0c_A 26 GTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRAT-VVAGIGY-SVDTAIELGKSAI 103 (314)
T ss_dssp TTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSE-EEEEECS-SHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCe-EEecCCc-CHHHHHHHHHHHH
Confidence 45789999999999999999999999877 99 677664 33555554432 2453 6566666 6654 345566
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 131 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 131 (298)
+.|.+.+.+.--.+. ..+-+.+.+-.+.+.++ ++ ++.+.-
T Consensus 104 ~~Gadavlv~~P~y~---------~~s~~~l~~~f~~va~a~~l-PiilYn 144 (314)
T 3d0c_A 104 DSGADCVMIHQPVHP---------YITDAGAVEYYRNIIEALDA-PSIIYF 144 (314)
T ss_dssp HTTCSEEEECCCCCS---------CCCHHHHHHHHHHHHHHSSS-CEEEEE
T ss_pred HcCCCEEEECCCCCC---------CCCHHHHHHHHHHHHHhCCC-CEEEEe
Confidence 789998777643321 13456677777777664 66 665543
No 52
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=85.81 E-value=5.2 Score=34.30 Aligned_cols=109 Identities=16% Similarity=0.163 Sum_probs=73.9
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |.|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 29 ~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvp-viaGvg~~~t~~ai~la~~a~ 107 (304)
T 3l21_A 29 GDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRAR-VIAGAGTYDTAHSIRLAKACA 107 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSE-EEEECCCSCHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCe-EEEeCCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999987 99 787765 33555554442 2343 555554444543 456667
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
+.|.+.+.+.--.+ + ..+-+.+.+-++.+.++ ++ ++.+.
T Consensus 108 ~~Gadavlv~~P~y----~-----~~s~~~l~~~f~~va~a~~l-PiilY 147 (304)
T 3l21_A 108 AEGAHGLLVVTPYY----S-----KPPQRGLQAHFTAVADATEL-PMLLY 147 (304)
T ss_dssp HHTCSEEEEECCCS----S-----CCCHHHHHHHHHHHHTSCSS-CEEEE
T ss_pred HcCCCEEEECCCCC----C-----CCCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 78999877764332 1 13567788888887774 66 66544
No 53
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=85.71 E-value=16 Score=31.18 Aligned_cols=109 Identities=19% Similarity=0.207 Sum_probs=72.4
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 25 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvp-ViaGvg~~~t~~ai~la~~A~ 103 (303)
T 2wkj_A 25 QQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIK-LIAHVGCVSTAESQQLAASAK 103 (303)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSE-EEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEecCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999987 99 677664 33555554432 2343 555455544543 455666
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-C-CCCEEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-G-YNPVKVN 130 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g-~~~v~i~ 130 (298)
+.|.+.+.+.--.+. ..+-+.+.+-.+.+.++ . + ++.+.
T Consensus 104 ~~Gadavlv~~P~y~---------~~s~~~l~~~f~~va~a~~~l-PiilY 144 (303)
T 2wkj_A 104 RYGFDAVSAVTPFYY---------PFSFEEHCDHYRAIIDSADGL-PMVVY 144 (303)
T ss_dssp HHTCSEEEEECCCSS---------CCCHHHHHHHHHHHHHHHTTC-CEEEE
T ss_pred hCCCCEEEecCCCCC---------CCCHHHHHHHHHHHHHhCCCC-CEEEE
Confidence 779998877743321 12456777777777664 5 7 66553
No 54
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=85.61 E-value=7.5 Score=33.16 Aligned_cols=109 Identities=12% Similarity=0.150 Sum_probs=72.2
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+...| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 14 ~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvp-viaGvg~~~t~~ai~la~~A~ 92 (297)
T 2rfg_A 14 INGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVP-VIAGAGSNNPVEAVRYAQHAQ 92 (297)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSC-BEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCe-EEEccCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999987 99 677664 33555544431 2343 545555544543 456667
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
+.|.+.+.+.--.+ + ..+-+.+.+-.+.+.++ ++ ++.+.
T Consensus 93 ~~Gadavlv~~P~y----~-----~~s~~~l~~~f~~va~a~~l-PiilY 132 (297)
T 2rfg_A 93 QAGADAVLCVAGYY----N-----RPSQEGLYQHFKMVHDAIDI-PIIVY 132 (297)
T ss_dssp HHTCSEEEECCCTT----T-----CCCHHHHHHHHHHHHHHCSS-CEEEE
T ss_pred hcCCCEEEEcCCCC----C-----CCCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 78999887764322 1 13557777777777664 66 66543
No 55
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=85.56 E-value=16 Score=30.98 Aligned_cols=109 Identities=15% Similarity=0.187 Sum_probs=73.2
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+...| || |.|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 15 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~p-viaGvg~~~t~~ai~la~~a~ 93 (291)
T 3tak_A 15 KDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIP-IIAGTGANSTREAIELTKAAK 93 (291)
T ss_dssp TTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSC-EEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCe-EEEeCCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999877 99 777665 33555554432 2343 555555544543 456667
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
+.|.+.+.+.--.+ + ..+-+.+.+-.+.+.++ ++ ++.+.
T Consensus 94 ~~Gadavlv~~P~y----~-----~~~~~~l~~~f~~ia~a~~l-PiilY 133 (291)
T 3tak_A 94 DLGADAALLVTPYY----N-----KPTQEGLYQHYKAIAEAVEL-PLILY 133 (291)
T ss_dssp HHTCSEEEEECCCS----S-----CCCHHHHHHHHHHHHHHCCS-CEEEE
T ss_pred hcCCCEEEEcCCCC----C-----CCCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 78999887764332 1 13456777777777764 66 66554
No 56
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=85.45 E-value=2.7 Score=35.78 Aligned_cols=109 Identities=17% Similarity=0.206 Sum_probs=73.6
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhccCCCCcEEEEeCccchHh---hHHHHHHc
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTLAR---KLPKLKES 83 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll~~---~~~~l~~~ 83 (298)
.+..++.+.+.++++.+.+.|+..+...| || |+|..+ -.++++.+.+..+ . +-.-+.+..+.+ ..+...+.
T Consensus 13 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-g-ViaGvg~~~t~~ai~la~~A~~~ 90 (288)
T 2nuw_A 13 KQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTH-K-LIFQVGSLNLNDVMELVKFSNEM 90 (288)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCS-C-EEEECCCSCHHHHHHHHHHHHTS
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-C-eEEeeCCCCHHHHHHHHHHHHhc
Confidence 45789999999999999999999999987 99 888765 5588888776322 1 333343333433 45666677
Q ss_pred CCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 84 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 84 ~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
|.+.+.+.--.+ + + ..+-+.+.+-.+.+.++ ++ ++.+.
T Consensus 91 Gadavlv~~P~y----~-~---~~s~~~l~~~f~~va~a~~l-PiilY 129 (288)
T 2nuw_A 91 DILGVSSHSPYY----F-P---RLPEKFLAKYYEEIARISSH-SLYIY 129 (288)
T ss_dssp CCSEEEECCCCS----S-C---SCCHHHHHHHHHHHHHHCCS-CEEEE
T ss_pred CCCEEEEcCCcC----C-C---CCCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 999877764332 1 1 03557777777777664 66 66543
No 57
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=85.32 E-value=8.6 Score=32.66 Aligned_cols=106 Identities=15% Similarity=0.197 Sum_probs=70.7
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHHHcC
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKESG 84 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~~~~ 84 (298)
.++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...+.|
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvp-viaGvg~~~t~~ai~la~~a~~~G 97 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVP-VIAGTGTNDTEKSIQASIQAKALG 97 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSC-EEEECCCSCHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCc-EEEeCCcccHHHHHHHHHHHHHcC
Confidence 89999999999999999999999987 99 777664 33555544332 2443 555554444543 456667789
Q ss_pred CCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 85 LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 85 ~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
.+.+.+.--.+. ..+-+.+.+-.+.+.++ ++ ++.+.
T Consensus 98 adavlv~~P~y~---------~~~~~~l~~~f~~ia~a~~l-PiilY 134 (292)
T 3daq_A 98 ADAIMLITPYYN---------KTNQRGLVKHFEAIADAVKL-PVVLY 134 (292)
T ss_dssp CSEEEEECCCSS---------CCCHHHHHHHHHHHHHHHCS-CEEEE
T ss_pred CCEEEECCCCCC---------CCCHHHHHHHHHHHHHhCCC-CEEEE
Confidence 998877643321 12456677777777663 77 66554
No 58
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=85.22 E-value=16 Score=30.85 Aligned_cols=108 Identities=12% Similarity=0.166 Sum_probs=72.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHHH
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 82 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~~ 82 (298)
+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...+
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~p-viaGvg~~~t~~ai~la~~a~~ 93 (289)
T 2yxg_A 15 NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQ-VIAGAGSNCTEEAIELSVFAED 93 (289)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSE-EEEECCCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEeCCCCCHHHHHHHHHHHHh
Confidence 5679999999999999999999999987 99 777664 33555554432 2343 555555544543 4566667
Q ss_pred cCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 83 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 83 ~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
.|.+.+.+.--.+. ..+-+.+.+-.+.+.++ ++ ++.+.
T Consensus 94 ~Gadavlv~~P~y~---------~~s~~~l~~~f~~ia~a~~l-PiilY 132 (289)
T 2yxg_A 94 VGADAVLSITPYYN---------KPTQEGLRKHFGKVAESINL-PIVLY 132 (289)
T ss_dssp HTCSEEEEECCCSS---------CCCHHHHHHHHHHHHHHCSS-CEEEE
T ss_pred cCCCEEEECCCCCC---------CCCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 89998877743321 13557777777777664 66 66543
No 59
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=85.17 E-value=17 Score=30.99 Aligned_cols=108 Identities=19% Similarity=0.251 Sum_probs=73.1
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 26 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvp-ViaGvg~~~t~~ai~la~~A~ 104 (301)
T 1xky_A 26 INGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVP-VIAGTGSNNTHASIDLTKKAT 104 (301)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSC-EEEECCCSCHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCce-EEeCCCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999987 99 677664 33555544431 2453 555555545544 456667
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKV 129 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i 129 (298)
+.|.+.+.+.--.+. ..+-+.+.+-.+.+.++ ++ ++.+
T Consensus 105 ~~Gadavlv~~P~y~---------~~s~~~l~~~f~~va~a~~l-Piil 143 (301)
T 1xky_A 105 EVGVDAVMLVAPYYN---------KPSQEGMYQHFKAIAESTPL-PVML 143 (301)
T ss_dssp HTTCSEEEEECCCSS---------CCCHHHHHHHHHHHHHTCSS-CEEE
T ss_pred hcCCCEEEEcCCCCC---------CCCHHHHHHHHHHHHHhcCC-CEEE
Confidence 789998877744321 13557777888777774 56 6654
No 60
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=85.07 E-value=17 Score=31.01 Aligned_cols=108 Identities=18% Similarity=0.210 Sum_probs=72.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHHH
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 82 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~~ 82 (298)
+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...+
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvp-ViaGvg~~st~~ai~la~~A~~ 105 (306)
T 1o5k_A 27 NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIP-VIVGAGTNSTEKTLKLVKQAEK 105 (306)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSC-EEEECCCSCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCe-EEEcCCCccHHHHHHHHHHHHh
Confidence 5679999999999999999999999987 99 677664 33555544431 2353 555555545544 3455667
Q ss_pred cCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 83 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 83 ~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
.|.+.+.+.--.+. ..+-+.+.+-.+.+.++ ++ ++.+.
T Consensus 106 ~Gadavlv~~P~y~---------~~s~~~l~~~f~~va~a~~l-PiilY 144 (306)
T 1o5k_A 106 LGANGVLVVTPYYN---------KPTQEGLYQHYKYISERTDL-GIVVY 144 (306)
T ss_dssp HTCSEEEEECCCSS---------CCCHHHHHHHHHHHHTTCSS-CEEEE
T ss_pred cCCCEEEECCCCCC---------CCCHHHHHHHHHHHHHhCCC-CEEEE
Confidence 79998877743321 13457777777777764 56 66543
No 61
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=84.93 E-value=4.6 Score=34.91 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=72.8
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 25 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvp-viaGvg~~~t~~ai~la~~a~ 103 (318)
T 3qfe_A 25 KTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFP-IMAGVGAHSTRQVLEHINDAS 103 (318)
T ss_dssp TTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSC-EEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEeCCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999987 99 777665 33555554432 2453 555555544543 456667
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 131 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 131 (298)
+.|.+.+.+---. .|.+ ..+-+.+.+-.+.+.++ ++ ++.+.-
T Consensus 104 ~~Gadavlv~~P~----y~~k---p~~~~~l~~~f~~ia~a~~l-PiilYn 146 (318)
T 3qfe_A 104 VAGANYVLVLPPA----YFGK---ATTPPVIKSFFDDVSCQSPL-PVVIYN 146 (318)
T ss_dssp HHTCSEEEECCCC----C------CCCHHHHHHHHHHHHHHCSS-CEEEEE
T ss_pred HcCCCEEEEeCCc----ccCC---CCCHHHHHHHHHHHHhhCCC-CEEEEe
Confidence 7899977775332 2211 12456777777777664 66 665544
No 62
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=84.79 E-value=17 Score=30.77 Aligned_cols=109 Identities=12% Similarity=0.091 Sum_probs=72.9
Q ss_pred CCCCCCHHHHHHHHHHHHh-CCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVT-SGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKL 80 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~-~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l 80 (298)
.+..++.+.+.++++.+.+ .|+..+...| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+..
T Consensus 17 ~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvp-viaGvg~~~t~~ai~la~~a 95 (293)
T 1f6k_A 17 EDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIA-LIAQVGSVNLKEAVELGKYA 95 (293)
T ss_dssp TTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSE-EEEECCCSCHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCe-EEEecCCCCHHHHHHHHHHH
Confidence 4578999999999999999 9999999987 99 888765 33555554432 2343 555555545544 34556
Q ss_pred HHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 81 KESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 81 ~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
.+.|.+.+.+.--.+. ..+-+.+.+-.+.+.++ ++ ++.+.
T Consensus 96 ~~~Gadavlv~~P~y~---------~~~~~~l~~~f~~va~a~~l-PiilY 136 (293)
T 1f6k_A 96 TELGYDCLSAVTPFYY---------KFSFPEIKHYYDTIIAETGS-NMIVY 136 (293)
T ss_dssp HHHTCSEEEEECCCSS---------CCCHHHHHHHHHHHHHHHCC-CEEEE
T ss_pred HhcCCCEEEECCCCCC---------CCCHHHHHHHHHHHHHhCCC-CEEEE
Confidence 6779998877743321 13456777777776664 66 66553
No 63
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=84.74 E-value=18 Score=31.01 Aligned_cols=110 Identities=13% Similarity=0.138 Sum_probs=73.8
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+...| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 37 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvp-ViaGvg~~st~eai~la~~A~ 115 (314)
T 3qze_A 37 AQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIP-VIAGTGANSTREAVALTEAAK 115 (314)
T ss_dssp TTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSC-EEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEeCCCcCHHHHHHHHHHHH
Confidence 45689999999999999999999999987 99 888765 33555544332 2343 555555544544 456677
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 131 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 131 (298)
+.|.+.+.+---.+ + ..+-+.+.+-.+.+.++ ++ ++.+.-
T Consensus 116 ~~Gadavlv~~P~y----~-----~~s~~~l~~~f~~va~a~~l-PiilYn 156 (314)
T 3qze_A 116 SGGADACLLVTPYY----N-----KPTQEGMYQHFRHIAEAVAI-PQILYN 156 (314)
T ss_dssp HTTCSEEEEECCCS----S-----CCCHHHHHHHHHHHHHHSCS-CEEEEE
T ss_pred HcCCCEEEEcCCCC----C-----CCCHHHHHHHHHHHHHhcCC-CEEEEe
Confidence 78999877764322 1 13456777777777764 67 665543
No 64
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=84.73 E-value=18 Score=30.85 Aligned_cols=109 Identities=16% Similarity=0.128 Sum_probs=74.1
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--C-CCCcEEEEeCccchHh---hHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--K-GLKTLAMTTNGLTLAR---KLPKL 80 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~-~~~~v~i~TNG~ll~~---~~~~l 80 (298)
.+..++.+.+.++++.+.+.|+..+...| || |+|..+ -.++++.+.+. . .+. +-.-+.+..+.+ ..+..
T Consensus 21 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvp-viaGvg~~~t~~ai~la~~a 99 (301)
T 3m5v_A 21 KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVK-VLAGAGSNATHEAVGLAKFA 99 (301)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCE-EEEECCCSSHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCe-EEEeCCCCCHHHHHHHHHHH
Confidence 45689999999999999999999999987 99 888765 34555555442 2 343 555555545544 45666
Q ss_pred HHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 81 KESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 81 ~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
.+.|.+.+.+.--.+. ..+-+.+.+-.+.+.++ ++ ++.+.
T Consensus 100 ~~~Gadavlv~~P~y~---------~~s~~~l~~~f~~va~a~~l-PiilY 140 (301)
T 3m5v_A 100 KEHGADGILSVAPYYN---------KPTQQGLYEHYKAIAQSVDI-PVLLY 140 (301)
T ss_dssp HHTTCSEEEEECCCSS---------CCCHHHHHHHHHHHHHHCSS-CEEEE
T ss_pred HHcCCCEEEEcCCCCC---------CCCHHHHHHHHHHHHHhCCC-CEEEE
Confidence 7789998877643321 13457777777777764 66 66554
No 65
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=84.45 E-value=18 Score=30.68 Aligned_cols=108 Identities=19% Similarity=0.227 Sum_probs=72.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHHH
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 82 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~~ 82 (298)
+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...+
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvp-viaGvg~~~t~~ai~la~~A~~ 93 (294)
T 2ehh_A 15 EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIK-VIAGTGGNATHEAVHLTAHAKE 93 (294)
T ss_dssp TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSE-EEEECCCSCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEecCCCCHHHHHHHHHHHHh
Confidence 5679999999999999999999999987 99 677664 33555554432 2343 555555545544 3456667
Q ss_pred cCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 83 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 83 ~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
.|.+.+.+.--.+. ..+-+.+.+-.+.+.++ ++ ++.+.
T Consensus 94 ~Gadavlv~~P~y~---------~~s~~~l~~~f~~va~a~~l-PiilY 132 (294)
T 2ehh_A 94 VGADGALVVVPYYN---------KPTQRGLYEHFKTVAQEVDI-PIIIY 132 (294)
T ss_dssp TTCSEEEEECCCSS---------CCCHHHHHHHHHHHHHHCCS-CEEEE
T ss_pred cCCCEEEECCCCCC---------CCCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 89998877743321 13556777777777664 66 66543
No 66
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=84.34 E-value=3.1 Score=35.64 Aligned_cols=111 Identities=12% Similarity=0.140 Sum_probs=71.3
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCC-cEEEEeCccch-HhhHHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLK-TLAMTTNGLTL-ARKLPKLKE 82 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~-~v~i~TNG~ll-~~~~~~l~~ 82 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. -+++.+|.+.- -+..+...+
T Consensus 18 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~ 97 (300)
T 3eb2_A 18 AEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEK 97 (300)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999998877 99 777765 33555544331 2332 23444444322 234567777
Q ss_pred cCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEEE
Q 022377 83 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 131 (298)
Q Consensus 83 ~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 131 (298)
.|.+.+.+---.+. ..+-+.+.+-++.+.++ ++ ++.+.-
T Consensus 98 ~Gadavlv~~P~y~---------~~~~~~l~~~f~~va~a~~l-PiilYn 137 (300)
T 3eb2_A 98 LGADGILAILEAYF---------PLKDAQIESYFRAIADAVEI-PVVIYT 137 (300)
T ss_dssp HTCSEEEEEECCSS---------CCCHHHHHHHHHHHHHHCSS-CEEEEE
T ss_pred cCCCEEEEcCCCCC---------CCCHHHHHHHHHHHHHHCCC-CEEEEE
Confidence 89998777643321 13456777777777663 66 665443
No 67
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=84.28 E-value=18 Score=30.61 Aligned_cols=108 Identities=19% Similarity=0.238 Sum_probs=71.5
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHhhH---HHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLARKL---PKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~~~---~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+.+ +...
T Consensus 15 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~p-viaGvg~~~t~~ai~la~~a~ 93 (292)
T 2ojp_A 15 EKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIP-VIAGTGANATAEAISLTQRFN 93 (292)
T ss_dssp TTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSC-EEEECCCSSHHHHHHHHHHTT
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCc-EEEecCCccHHHHHHHHHHHH
Confidence 45789999999999999999999999987 99 777664 33555554431 2353 65555554555544 4445
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKV 129 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i 129 (298)
+.|.+.+.+.--.+. ..+-+.+.+-.+.+.++ ++ ++.+
T Consensus 94 ~~Gadavlv~~P~y~---------~~s~~~l~~~f~~ia~a~~l-Piil 132 (292)
T 2ojp_A 94 DSGIVGCLTVTPYYN---------RPSQEGLYQHFKAIAEHTDL-PQIL 132 (292)
T ss_dssp TSSCSEEEEECCCSS---------CCCHHHHHHHHHHHHTTCSS-CEEE
T ss_pred hcCCCEEEECCCCCC---------CCCHHHHHHHHHHHHHhcCC-CEEE
Confidence 568898777643321 13567777777777764 56 6544
No 68
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=84.15 E-value=9.5 Score=32.39 Aligned_cols=109 Identities=17% Similarity=0.137 Sum_probs=72.2
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 14 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~p-viaGvg~~~t~~ai~la~~A~ 92 (292)
T 2vc6_A 14 ADDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVP-VIAGAGSNSTAEAIAFVRHAQ 92 (292)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSC-BEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEecCCccHHHHHHHHHHHH
Confidence 45789999999999999999999999887 99 677664 33555554431 2343 555555544443 455667
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
+.|.+.+.+.--.+. ..+-+.+.+-.+.+.++ ++ ++.+.
T Consensus 93 ~~Gadavlv~~P~y~---------~~s~~~l~~~f~~ia~a~~l-PiilY 132 (292)
T 2vc6_A 93 NAGADGVLIVSPYYN---------KPTQEGIYQHFKAIDAASTI-PIIVY 132 (292)
T ss_dssp HTTCSEEEEECCCSS---------CCCHHHHHHHHHHHHHHCSS-CEEEE
T ss_pred HcCCCEEEEcCCCCC---------CCCHHHHHHHHHHHHHhCCC-CEEEE
Confidence 789998877644321 13456777777777664 66 66543
No 69
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=84.01 E-value=17 Score=30.24 Aligned_cols=126 Identities=14% Similarity=0.157 Sum_probs=81.9
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch----H----hhHHHHHHc
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL----A----RKLPKLKES 83 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll----~----~~~~~l~~~ 83 (298)
+...+.+++.++++++.++++..|++ +|.+...+....+..++. +..+. |+-+ . ...+...+.
T Consensus 53 ~p~~t~~~I~~lc~eA~~~~~aaVCV-------~p~~V~~a~~~L~gs~v~-v~tVi-gFP~G~~~~~~Kv~Ea~~Ai~~ 123 (260)
T 3r12_A 53 KPFATPDDIKKLCLEARENRFHGVCV-------NPCYVKLAREELEGTDVK-VVTVV-GFPLGANETRTKAHEAIFAVES 123 (260)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCSEEEE-------CGGGHHHHHHHHTTSCCE-EEEEE-STTTCCSCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCcEEEE-------CHHHHHHHHHHhcCCCCe-EEEEe-cCCCCCCcHHHHHHHHHHHHHc
Confidence 34678999999999999999888886 566554444333323553 54433 2222 1 134556667
Q ss_pred CCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc--CCCCEEEEEEEecC-CCHhHHHHHHHHHhhCCCee
Q 022377 84 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV--GYNPVKVNCVVMRG-FNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 84 ~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~--g~~~v~i~~vi~~~-~n~~~i~~i~~~~~~~g~~~ 156 (298)
|.+.|.+-++-. . +. .+.|+.+.+-|+.+++. +. .+ .+.+-.+ .+.+++....+.+.+.|.++
T Consensus 124 GAdEIDmViNig-~-----lk-~g~~~~v~~eI~~v~~a~~~~-~l--KVIlEt~~Lt~eei~~A~~ia~eaGADf 189 (260)
T 3r12_A 124 GADEIDMVINVG-M-----LK-AKEWEYVYEDIRSVVESVKGK-VV--KVIIETCYLDTEEKIAACVISKLAGAHF 189 (260)
T ss_dssp TCSEEEEECCHH-H-----HH-TTCHHHHHHHHHHHHHHTTTS-EE--EEECCGGGCCHHHHHHHHHHHHHTTCSE
T ss_pred CCCEEEEEeehh-h-----hc-cccHHHHHHHHHHHHHhcCCC-cE--EEEEeCCCCCHHHHHHHHHHHHHhCcCE
Confidence 999888887642 1 11 24688888888888876 33 33 3332222 46788999999999999874
No 70
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=83.85 E-value=18 Score=30.19 Aligned_cols=119 Identities=15% Similarity=0.172 Sum_probs=77.5
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc--CCccCccccHH------------------HHHHHHhcc-CCCCcEEEEe--Cc
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLT--GGEPTVRKDIE------------------EACFHLSKL-KGLKTLAMTT--NG 70 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~t--GGEPll~~~~~------------------~ii~~~~~~-~~~~~v~i~T--NG 70 (298)
..+.+++.++++.+.+.|+..|.+. -.+|++...++ ++++.+++. .++. +.+.+ |.
T Consensus 27 dp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~P-v~lm~y~n~ 105 (268)
T 1qop_A 27 DPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIP-IGLLMYANL 105 (268)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSC-EEEEECHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCC-EEEEEcccH
Confidence 4667899999999999998877773 25676554433 567777775 4665 65543 54
Q ss_pred cc---hHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHH
Q 022377 71 LT---LARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVE 147 (298)
Q Consensus 71 ~l---l~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~ 147 (298)
.. ..+.++.+.++|.+.+.+. |-+. +.+.+.++.++++|+ .+ -.++.+....+.+.++.+
T Consensus 106 v~~~g~~~~~~~~~~aGadgii~~-d~~~-------------e~~~~~~~~~~~~g~-~~--i~l~~p~t~~~~i~~i~~ 168 (268)
T 1qop_A 106 VFNNGIDAFYARCEQVGVDSVLVA-DVPV-------------EESAPFRQAALRHNI-AP--IFICPPNADDDLLRQVAS 168 (268)
T ss_dssp HHTTCHHHHHHHHHHHTCCEEEET-TCCG-------------GGCHHHHHHHHHTTC-EE--ECEECTTCCHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHcCCCEEEEc-CCCH-------------HHHHHHHHHHHHcCC-cE--EEEECCCCCHHHHHHHHh
Confidence 22 2568899999999987775 4331 334456677788887 44 234555444566677766
Q ss_pred HHh
Q 022377 148 LTR 150 (298)
Q Consensus 148 ~~~ 150 (298)
...
T Consensus 169 ~~~ 171 (268)
T 1qop_A 169 YGR 171 (268)
T ss_dssp HCC
T ss_pred hCC
Confidence 543
No 71
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=83.79 E-value=17 Score=29.92 Aligned_cols=127 Identities=14% Similarity=0.137 Sum_probs=83.6
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeC---ccch-H---hhHHHHHHcC
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTN---GLTL-A---RKLPKLKESG 84 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TN---G~ll-~---~~~~~l~~~~ 84 (298)
+...+.+++.++++++.++++..|++ +|.+...+....+..++. +..+++ |... . ...+...+.|
T Consensus 37 ~p~~t~~~i~~lc~eA~~~~~~aVcV-------~p~~v~~a~~~L~~s~v~-v~tVigFP~G~~~~~~Kv~Ea~~Ai~~G 108 (239)
T 3ngj_A 37 KADATEEQIRKLCSEAAEYKFASVCV-------NPTWVPLCAELLKGTGVK-VCTVIGFPLGATPSEVKAYETKVAVEQG 108 (239)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCSEEEE-------CGGGHHHHHHHHTTSSCE-EEEEESTTTCCSCHHHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHhcCCcEEEE-------CHHHHHHHHHHhCCCCCe-EEEEeccCCCCCchHHHHHHHHHHHHcC
Confidence 34788999999999999999888885 566554444333324664 665553 2111 1 1356666779
Q ss_pred CCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc--CCCCEEEEEEEecC-CCHhHHHHHHHHHhhCCCee
Q 022377 85 LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV--GYNPVKVNCVVMRG-FNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 85 ~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~--g~~~v~i~~vi~~~-~n~~~i~~i~~~~~~~g~~~ 156 (298)
.+.|.+-++-. .. . .+.++.+.+-|+.+++. +. .+++ .+-.+ .+.+++....+.+.+.|.++
T Consensus 109 AdEIDmViNig--~l----k-~g~~~~v~~eI~~v~~a~~~~-~lKV--IlEt~~Lt~eei~~a~~ia~~aGADf 173 (239)
T 3ngj_A 109 AEEVDMVINIG--MV----K-AKKYDDVEKDVKAVVDASGKA-LTKV--IIECCYLTNEEKVEVCKRCVAAGAEY 173 (239)
T ss_dssp CSEEEEECCHH--HH----H-TTCHHHHHHHHHHHHHHHTTS-EEEE--ECCGGGSCHHHHHHHHHHHHHHTCSE
T ss_pred CCEEEEEeehH--Hh----c-cccHHHHHHHHHHHHHHhcCC-ceEE--EEecCCCCHHHHHHHHHHHHHHCcCE
Confidence 99998888652 11 1 35688888888888876 33 3333 22222 46788999999999989864
No 72
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=83.33 E-value=3.8 Score=34.91 Aligned_cols=106 Identities=14% Similarity=0.189 Sum_probs=67.9
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHHH
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 82 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~~ 82 (298)
+. ++.+.+.++++.+.+.|+..+...| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...+
T Consensus 17 dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~p-vi~Gvg~~~t~~ai~la~~a~~ 94 (291)
T 3a5f_A 17 TG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIP-VIAGTGSNNTAASIAMSKWAES 94 (291)
T ss_dssp SS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSC-EEEECCCSSHHHHHHHHHHHHH
T ss_pred CC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEeCCcccHHHHHHHHHHHHh
Confidence 45 9999999999999999999999987 99 677664 33555554431 2353 555555544544 4566677
Q ss_pred cCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEE
Q 022377 83 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKV 129 (298)
Q Consensus 83 ~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i 129 (298)
.|.+.+.+.--.+. ..+-+.+.+-.+.+.++ ++ ++.+
T Consensus 95 ~Gadavlv~~P~y~---------~~s~~~l~~~f~~ia~a~~l-Piil 132 (291)
T 3a5f_A 95 IGVDGLLVITPYYN---------KTTQKGLVKHFKAVSDAVST-PIII 132 (291)
T ss_dssp TTCSEEEEECCCSS---------CCCHHHHHHHC-CTGGGCCS-CEEE
T ss_pred cCCCEEEEcCCCCC---------CCCHHHHHHHHHHHHHhcCC-CEEE
Confidence 89998877743321 12445666666655553 55 5544
No 73
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=82.85 E-value=8.8 Score=33.75 Aligned_cols=107 Identities=12% Similarity=0.118 Sum_probs=69.4
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 73 ~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvp-ViaGvg~~st~eai~la~~A~ 151 (360)
T 4dpp_A 73 PDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIK-VIGNTGSNSTREAIHATEQGF 151 (360)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSE-EEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCe-EEEecCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999977 99 777665 33555544432 2343 544454444544 345666
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
+.|.+.+.+---. |. ..+-+.+.+-.+.+.+. . ++.+
T Consensus 152 ~~Gadavlvv~Py-----Y~----k~sq~gl~~hf~~IA~a-~-Piil 188 (360)
T 4dpp_A 152 AVGMHAALHINPY-----YG----KTSIEGLIAHFQSVLHM-G-PTII 188 (360)
T ss_dssp HTTCSEEEEECCC-----SS----CCCHHHHHHHHHTTGGG-S-CEEE
T ss_pred HcCCCEEEEcCCC-----CC----CCCHHHHHHHHHHHHHh-C-CEEE
Confidence 7899977765322 21 13456666766666665 5 5543
No 74
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=82.83 E-value=6 Score=33.95 Aligned_cols=112 Identities=11% Similarity=0.092 Sum_probs=74.1
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 28 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~p-viaGvg~~~t~~ai~la~~A~ 106 (307)
T 3s5o_A 28 ATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRL-LLAGSGCESTQATVEMTVSMA 106 (307)
T ss_dssp TTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSE-EEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCc-EEEecCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999987 99 777765 44666666553 2342 444454444543 456667
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEEE
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVNC 131 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~ 131 (298)
+.|.+.+.+.--.+ + + ...+-+.+.+-++.+.++ ++ ++.+.-
T Consensus 107 ~~Gadavlv~~P~y----~-~--~~~s~~~l~~~f~~ia~a~~l-PiilYn 149 (307)
T 3s5o_A 107 QVGADAAMVVTPCY----Y-R--GRMSSAALIHHYTKVADLSPI-PVVLYS 149 (307)
T ss_dssp HTTCSEEEEECCCT----T-G--GGCCHHHHHHHHHHHHHHCSS-CEEEEE
T ss_pred HcCCCEEEEcCCCc----C-C--CCCCHHHHHHHHHHHHhhcCC-CEEEEe
Confidence 78999887764332 1 1 112456777777777664 66 665443
No 75
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=82.63 E-value=9 Score=32.90 Aligned_cols=128 Identities=16% Similarity=0.187 Sum_probs=80.7
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhccC-CCCcEEEEeCccchHh---hHHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKLK-GLKTLAMTTNGLTLAR---KLPKLKE 82 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~~-~~~~v~i~TNG~ll~~---~~~~l~~ 82 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+.. .+. +-.-+.+..+.+ ..+...+
T Consensus 22 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvp-ViaGvg~~~t~~ai~la~~A~~ 100 (313)
T 3dz1_A 22 DDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQ-VIVGVSAPGFAAMRRLARLSMD 100 (313)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSE-EEEECCCSSHHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCc-EEEecCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999987 99 777665 346666554432 342 544444444543 4566677
Q ss_pred cCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-C--CCCEEEEEEE-ecCCCHhHHHHHHHHHhh
Q 022377 83 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-G--YNPVKVNCVV-MRGFNDDEICDFVELTRD 151 (298)
Q Consensus 83 ~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g--~~~v~i~~vi-~~~~n~~~i~~i~~~~~~ 151 (298)
.|.+.+.+.- |- |. .+-+.+.+-++.+.++ + + ++.+.-+- ..|.+.. .+-+.+++.+
T Consensus 101 ~Gadavlv~~----P~-~~-----~s~~~l~~~f~~va~a~~~~l-PiilYn~P~~tg~~l~-~~~~~~La~~ 161 (313)
T 3dz1_A 101 AGAAGVMIAP----PP-SL-----RTDEQITTYFRQATEAIGDDV-PWVLQDYPLTLSVVMT-PKVIRQIVMD 161 (313)
T ss_dssp HTCSEEEECC----CT-TC-----CSHHHHHHHHHHHHHHHCTTS-CEEEEECHHHHCCCCC-HHHHHHHHHH
T ss_pred cCCCEEEECC----CC-CC-----CCHHHHHHHHHHHHHhCCCCC-cEEEEeCccccCcCCC-HHHHHHHHHh
Confidence 8999887642 22 21 2567788888887764 5 7 66554321 1233332 3445555544
No 76
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=82.45 E-value=3.1 Score=35.38 Aligned_cols=107 Identities=14% Similarity=0.114 Sum_probs=72.1
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc-CCCCcEEEEeCccchH---hhHHHHHHc
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL-KGLKTLAMTTNGLTLA---RKLPKLKES 83 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~-~~~~~v~i~TNG~ll~---~~~~~l~~~ 83 (298)
+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. .+ +-.-+.+..+. +..+...+.
T Consensus 13 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi~Gvg~~~t~~ai~la~~A~~~ 89 (286)
T 2r91_A 13 GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VIVQVASLNADEAIALAKYAESR 89 (286)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EEEECCCSSHHHHHHHHHHHHHT
T ss_pred CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EEEeeCCCCHHHHHHHHHHHHhc
Confidence 5679999999999999999999999987 99 888765 44777766653 23 33334333343 345666778
Q ss_pred CCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 84 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 84 ~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
|.+.+.+.--.+ + + ..+-+.+.+-.+.+.++ ++ ++.+.
T Consensus 90 Gadavlv~~P~y----~-~---~~s~~~l~~~f~~va~a~~l-PiilY 128 (286)
T 2r91_A 90 GAEAVASLPPYY----F-P---RLSERQIAKYFRDLCSAVSI-PVFLY 128 (286)
T ss_dssp TCSEEEECCSCS----S-T---TCCHHHHHHHHHHHHHHCSS-CEEEE
T ss_pred CCCEEEEcCCcC----C-C---CCCHHHHHHHHHHHHHhcCC-CEEEE
Confidence 999887764332 1 1 03557777777777664 66 66543
No 77
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=81.63 E-value=6.2 Score=32.72 Aligned_cols=119 Identities=18% Similarity=0.157 Sum_probs=68.9
Q ss_pred HHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEE-ecC-CCCHH
Q 022377 21 LRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNI-SLD-TLVPA 98 (298)
Q Consensus 21 ~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~i-Sld-g~~~~ 98 (298)
.+.++.+.+.|...|++. .|.. +++.+.++.+++. |++ ..+..|...-.+.++.+.+ .+|.|.+ |++ |+.-.
T Consensus 99 ~~~i~~~~~aGAd~itvH-~Ea~--~~~~~~i~~ir~~-G~k-~Gvalnp~Tp~e~l~~~l~-~vD~VlvMsV~PGfgGQ 172 (246)
T 3inp_A 99 DALIESFAKAGATSIVFH-PEAS--EHIDRSLQLIKSF-GIQ-AGLALNPATGIDCLKYVES-NIDRVLIMSVNPGFGGQ 172 (246)
T ss_dssp HHHHHHHHHHTCSEEEEC-GGGC--SCHHHHHHHHHTT-TSE-EEEEECTTCCSGGGTTTGG-GCSEEEEECSCTTC--C
T ss_pred HHHHHHHHHcCCCEEEEc-cccc--hhHHHHHHHHHHc-CCe-EEEEecCCCCHHHHHHHHh-cCCEEEEeeecCCCCCc
Confidence 345777778898888886 4554 4678899999884 995 9999996443355666655 4787654 654 22111
Q ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCee
Q 022377 99 KFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 99 ~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~~ 156 (298)
.+ ....++++-+.-+.+.+.|. .+ .+.+.-|.|.+.+.++ .+.|+++
T Consensus 173 ~f----i~~~l~KI~~lr~~~~~~~~-~~--~I~VDGGI~~~ti~~~----~~aGAD~ 219 (246)
T 3inp_A 173 KF----IPAMLDKAKEISKWISSTDR-DI--LLEIDGGVNPYNIAEI----AVCGVNA 219 (246)
T ss_dssp CC----CTTHHHHHHHHHHHHHHHTS-CC--EEEEESSCCTTTHHHH----HTTTCCE
T ss_pred cc----chHHHHHHHHHHHHHHhcCC-Ce--eEEEECCcCHHHHHHH----HHcCCCE
Confidence 10 01224443332223333455 33 3445566776655443 4567764
No 78
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=81.29 E-value=20 Score=29.02 Aligned_cols=128 Identities=16% Similarity=0.158 Sum_probs=82.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeC---ccchH----hhHHHHHHcC
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTN---GLTLA----RKLPKLKESG 84 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TN---G~ll~----~~~~~l~~~~ 84 (298)
+...+.+++.++++++.++|+..|+ ++|.+...+..... +++ +.-.++ |..+. ...+...+.|
T Consensus 14 ~p~~t~~~i~~l~~~a~~~g~~~v~-------v~~~~v~~~~~~l~--~v~-v~~v~~~P~g~~~~~~k~~~~~~A~~~G 83 (225)
T 1mzh_A 14 KPHLSEKEIEEFVLKSEELGIYAVC-------VNPYHVKLASSIAK--KVK-VCCVIGFPLGLNKTSVKVKEAVEAVRDG 83 (225)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCSEEE-------ECGGGHHHHHHHCS--SSE-EEEEESTTTCCSCHHHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHhCCeEEE-------ECHHHHHHHHHHhc--CCc-eeeEecCCCCccchhhhHHHHHHHHHcC
Confidence 3457999999999999999988887 66666655443322 443 443343 32221 2345667789
Q ss_pred CCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEE-ecCCCHhHHHHHHHHHhhCCCeeE
Q 022377 85 LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV-MRGFNDDEICDFVELTRDRPINIR 157 (298)
Q Consensus 85 ~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi-~~~~n~~~i~~i~~~~~~~g~~~~ 157 (298)
.+.|.+-++-.. .+ .+.++.+.+-++.+++..- ++.+.+.+ .++.+.+++.++.+.+.+.|+++-
T Consensus 84 ad~Id~viN~g~------~~-~~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I 149 (225)
T 1mzh_A 84 AQELDIVWNLSA------FK-SEKYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFI 149 (225)
T ss_dssp CSEEEEECCHHH------HH-TTCHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEE
T ss_pred CCEEEEEecHHH------Hh-cCChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 998886665321 22 2456788888888888643 44444422 234567789999999999998643
No 79
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=79.15 E-value=31 Score=29.96 Aligned_cols=109 Identities=14% Similarity=0.225 Sum_probs=74.1
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhccCCCCcEEEEeCccchHh---hHHHHHHc
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTLAR---KLPKLKES 83 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll~~---~~~~l~~~ 83 (298)
.+..++.+.+.++++.+.+.|+..|.+.| || |+|..+ -.++++.... ..+. +-.-+.+..+.+ ..+...+.
T Consensus 40 ~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~-grvp-ViaGvg~~st~eai~la~~A~~~ 117 (344)
T 2hmc_A 40 QDRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVK-AGIP-VIVGTGAVNTASAVAHAVHAQKV 117 (344)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHH-TTCC-EEEECCCSSHHHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhC-CCCc-EEEecCCCCHHHHHHHHHHHHhc
Confidence 45789999999999999999999999887 99 878765 3455555222 2454 655555545544 35556677
Q ss_pred CCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHH-c-CCCCEEEE
Q 022377 84 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIE-V-GYNPVKVN 130 (298)
Q Consensus 84 ~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~-~-g~~~v~i~ 130 (298)
|.+.+.+.--.+. + ..+-+.+.+-++.+.+ + ++ ++.+.
T Consensus 118 Gadavlv~~P~y~-----~---~~s~~~l~~~f~~IA~aa~~l-PiilY 157 (344)
T 2hmc_A 118 GAKGLMVIPRVLS-----R---GSVIAAQKAHFKAILSAAPEI-PAVIY 157 (344)
T ss_dssp TCSEEEECCCCSS-----S---TTCHHHHHHHHHHHHHHSTTS-CEEEE
T ss_pred CCCEEEECCCccC-----C---CCCHHHHHHHHHHHHhhCCCC-cEEEE
Confidence 9998877743321 1 1346778888888877 3 66 66553
No 80
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=79.15 E-value=10 Score=33.04 Aligned_cols=81 Identities=22% Similarity=0.290 Sum_probs=55.9
Q ss_pred CCCCCCHHHHHHHHHHHH-------hCCCCEEEEcCCc---------cCcc-------------ccH-HHHHHHHhccC-
Q 022377 11 KPQLLSLNEILRLAYLFV-------TSGVDKIRLTGGE---------PTVR-------------KDI-EEACFHLSKLK- 59 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~-------~~~~~~v~~tGGE---------Pll~-------------~~~-~~ii~~~~~~~- 59 (298)
...+||.+||.++++++. +.|...|.+.++- |..+ ..+ .++++.+++.-
T Consensus 138 ~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG 217 (349)
T 3hgj_A 138 VPEPLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVP 217 (349)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhc
Confidence 346899999999987654 3688999998877 6643 123 48888888743
Q ss_pred -CCCcEEE--EeC-----ccchH---hhHHHHHHcCCCeEEEec
Q 022377 60 -GLKTLAM--TTN-----GLTLA---RKLPKLKESGLTSVNISL 92 (298)
Q Consensus 60 -~~~~v~i--~TN-----G~ll~---~~~~~l~~~~~~~v~iSl 92 (298)
++. +.+ ..+ |.-.+ +.++.|.+.|++.|.+|.
T Consensus 218 ~d~p-V~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 218 RELP-LFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp TTSC-EEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCce-EEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 332 444 432 33343 346788889999999995
No 81
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=78.91 E-value=27 Score=29.00 Aligned_cols=119 Identities=13% Similarity=0.044 Sum_probs=76.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcC--CccCcccc------------------HHHHHHHHhccC-CCCcEEEE--eC
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTG--GEPTVRKD------------------IEEACFHLSKLK-GLKTLAMT--TN 69 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tG--GEPll~~~------------------~~~ii~~~~~~~-~~~~v~i~--TN 69 (298)
...+.++..++++.+.+.|+..|-+.. .+|+.... +.++++.+++.. ++. +.+. .|
T Consensus 26 g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~P-i~~m~y~n 104 (262)
T 2ekc_A 26 GYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIP-FLLMTYYN 104 (262)
T ss_dssp TSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSC-EEEECCHH
T ss_pred CCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCC-EEEEecCc
Confidence 456778999999999999988877721 34443222 335677777654 564 6663 34
Q ss_pred ccch---HhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHH
Q 022377 70 GLTL---ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFV 146 (298)
Q Consensus 70 G~ll---~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~ 146 (298)
..+- .+.++.+.++|.+.+.+. |-+ ++.+.+.++.++++|+ .+ -..+.+....+.+.++.
T Consensus 105 ~v~~~g~~~f~~~~~~aG~dgvii~-dl~-------------~ee~~~~~~~~~~~gl-~~--i~l~~p~t~~~rl~~ia 167 (262)
T 2ekc_A 105 PIFRIGLEKFCRLSREKGIDGFIVP-DLP-------------PEEAEELKAVMKKYVL-SF--VPLGAPTSTRKRIKLIC 167 (262)
T ss_dssp HHHHHCHHHHHHHHHHTTCCEEECT-TCC-------------HHHHHHHHHHHHHTTC-EE--CCEECTTCCHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHcCCCEEEEC-CCC-------------HHHHHHHHHHHHHcCC-cE--EEEeCCCCCHHHHHHHH
Confidence 2211 457888999999977774 332 3667777788888988 43 22344533455677776
Q ss_pred HHH
Q 022377 147 ELT 149 (298)
Q Consensus 147 ~~~ 149 (298)
+..
T Consensus 168 ~~a 170 (262)
T 2ekc_A 168 EAA 170 (262)
T ss_dssp HHC
T ss_pred HhC
Confidence 665
No 82
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=78.78 E-value=6.9 Score=34.12 Aligned_cols=82 Identities=20% Similarity=0.283 Sum_probs=54.8
Q ss_pred CCCCCCHHHHHHHHHHHHh-------CCCCEEEEcCCc---------cCcc-------------ccH-HHHHHHHhccCC
Q 022377 11 KPQLLSLNEILRLAYLFVT-------SGVDKIRLTGGE---------PTVR-------------KDI-EEACFHLSKLKG 60 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~-------~~~~~v~~tGGE---------Pll~-------------~~~-~~ii~~~~~~~~ 60 (298)
...+||.+||.++++++.+ .|...|.+.+|- |..+ ..+ .++++.+++.-+
T Consensus 130 ~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~ 209 (340)
T 3gr7_A 130 TPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWD 209 (340)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcC
Confidence 3468999999999876544 588889888763 6542 234 488888877434
Q ss_pred CC-cEEEEeC-----ccchH---hhHHHHHHcCCCeEEEec
Q 022377 61 LK-TLAMTTN-----GLTLA---RKLPKLKESGLTSVNISL 92 (298)
Q Consensus 61 ~~-~v~i~TN-----G~ll~---~~~~~l~~~~~~~v~iSl 92 (298)
+. .+.|..+ |.-.+ +.++.|.++|++.|.+|-
T Consensus 210 ~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~ 250 (340)
T 3gr7_A 210 GPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSS 250 (340)
T ss_dssp SCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEEC
T ss_pred CceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 43 1334433 22232 357888889999999984
No 83
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=78.50 E-value=57 Score=33.38 Aligned_cols=155 Identities=10% Similarity=0.072 Sum_probs=98.5
Q ss_pred CCCHHHHHHHHHHHHhC--CCCEEEEcCCc------cCccccHHHHHHHHhc-cCCCCcEEEEeCc---cc--------h
Q 022377 14 LLSLNEILRLAYLFVTS--GVDKIRLTGGE------PTVRKDIEEACFHLSK-LKGLKTLAMTTNG---LT--------L 73 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~--~~~~v~~tGGE------Pll~~~~~~ii~~~~~-~~~~~~v~i~TNG---~l--------l 73 (298)
.|+.++..++++.+.+. |+..+-..||. |+++.+=.+.++.+++ ..+.. +.+..-| .- .
T Consensus 551 r~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e~~~e~l~~l~~~~~~~~-~~~l~R~~n~vgy~~~pd~v~ 629 (1150)
T 3hbl_A 551 RVRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIPNVL-FQMLLRASNAVGYKNYPDNVI 629 (1150)
T ss_dssp CCCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCCSSE-EEEEEETTTBTCSSCCCHHHH
T ss_pred CCCHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCCCHHHHHHHHHHhCCCCe-EEEEeccccccccccCCchhH
Confidence 49999999999999997 88888887754 7887776677777665 23553 6665543 21 2
Q ss_pred HhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEec---------CCCHhHHHH
Q 022377 74 ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMR---------GFNDDEICD 144 (298)
Q Consensus 74 ~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~---------~~n~~~i~~ 144 (298)
.+.++...++|++.|.|.... ++ .+ .....++...+.|. .+....+.+. ..+.+.+.+
T Consensus 630 ~~~v~~a~~~Gvd~irif~~~-sd-~~----------~~~~~~~~~~e~g~-~~~~~i~~~~~~~~pe~~~~~~~~~~~~ 696 (1150)
T 3hbl_A 630 HKFVQESAKAGIDVFRIFDSL-NW-VD----------QMKVANEAVQEAGK-ISEGTICYTGDILNPERSNIYTLEYYVK 696 (1150)
T ss_dssp HHHHHHHHHTTCCEEEEECTT-CC-GG----------GGHHHHHHHHHTTC-EEEEEEECCSCTTCTTTCSSSSHHHHHH
T ss_pred HHHHHHHHhCCcCEEEEEeeC-CH-HH----------HHHHHHHHHHHHhh-heeEEEeecccccChhhcCCCCHHHHHH
Confidence 346788888999999988433 32 11 22345566667776 5555555441 145667888
Q ss_pred HHHHHhhCCCeeEEEeeecCCCCCCcccCCCCHHHHHHHHHHhC
Q 022377 145 FVELTRDRPINIRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKKF 188 (298)
Q Consensus 145 i~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~ 188 (298)
+++.+.+.|++. +.+...-+.. .+....++.+.+.+..
T Consensus 697 ~a~~~~~~Ga~~--i~l~Dt~G~~----~P~~~~~lv~~l~~~~ 734 (1150)
T 3hbl_A 697 LAKELEREGFHI--LAIKDMAGLL----KPKAAYELIGELKSAV 734 (1150)
T ss_dssp HHHHHHHTTCSE--EEEEETTCCC----CHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCe--eeEcCccCCC----CHHHHHHHHHHHHHhc
Confidence 888888888853 4444332221 1123456666666654
No 84
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=78.33 E-value=26 Score=35.98 Aligned_cols=156 Identities=13% Similarity=0.105 Sum_probs=95.2
Q ss_pred CCCCHHHHHHHHHHHHhCC--CCEEEEcCCc--c----CccccHHHHHHHHhc-cCCCCcEEEEeCc-----c------c
Q 022377 13 QLLSLNEILRLAYLFVTSG--VDKIRLTGGE--P----TVRKDIEEACFHLSK-LKGLKTLAMTTNG-----L------T 72 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~--~~~v~~tGGE--P----ll~~~~~~ii~~~~~-~~~~~~v~i~TNG-----~------l 72 (298)
..|+.++..++++.+.+.| +..|-+.||- | ++..+=.+.++.+++ .++.. +.+...| + .
T Consensus 568 ~~~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~p~e~l~~~~~~~~~~~-~~~l~R~~n~vg~~~~~~~~ 646 (1165)
T 2qf7_A 568 TRMRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLALIREGAPNLL-LQMLLRGANGVGYTNYPDNV 646 (1165)
T ss_dssp TCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCCHHHHHHHHHHHCTTSE-EEEEEETTTBTCSSCCCHHH
T ss_pred ccCCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcCCCHHHHHHHHHHHchhhH-HHHHhccccccccccCCchh
Confidence 3599999999999999985 4557765443 3 445443343443333 22443 5555432 2 1
Q ss_pred hHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEec--------CCCHhHHHH
Q 022377 73 LARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMR--------GFNDDEICD 144 (298)
Q Consensus 73 l~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~--------~~n~~~i~~ 144 (298)
..+.++...++|++.+.|. ++.+ .++.+...++.+++.|. .+.....++. ..+.+.+.+
T Consensus 647 ~~~~i~~a~~~g~d~irif-~sl~-----------~~~~~~~~i~~~~~~g~-~v~~~i~~~~~~~d~~r~~~~~~~~~~ 713 (1165)
T 2qf7_A 647 VKYFVRQAAKGGIDLFRVF-DCLN-----------WVENMRVSMDAIAEENK-LCEAAICYTGDILNSARPKYDLKYYTN 713 (1165)
T ss_dssp HHHHHHHHHHHTCCEEEEE-CTTC-----------CGGGGHHHHHHHHHTTC-EEEEEEECCSCTTCTTSGGGCHHHHHH
T ss_pred HHHHHHHHHhcCcCEEEEE-eeHH-----------HHHHHHHHHHHHHhccc-eEEEEEEEeccccCCCCCCCCHHHHHH
Confidence 2356888889999998885 4321 24566778888889987 6665544431 145677888
Q ss_pred HHHHHhhCCCeeEEEeeecCCCCCCcccCCCCHHHHHHHHHHhC
Q 022377 145 FVELTRDRPINIRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKKF 188 (298)
Q Consensus 145 i~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~ 188 (298)
+++.+.+.|++ .+.+...-+.. .+....++.+.+.+.+
T Consensus 714 ~~~~~~~~Ga~--~i~l~DT~G~~----~P~~~~~lv~~l~~~~ 751 (1165)
T 2qf7_A 714 LAVELEKAGAH--IIAVKDMAGLL----KPAAAKVLFKALREAT 751 (1165)
T ss_dssp HHHHHHHTTCS--EEEEEETTCCC----CHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCC--EEEEeCccCCc----CHHHHHHHHHHHHHhc
Confidence 88888888985 33444332221 1122456666776665
No 85
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=78.32 E-value=31 Score=29.49 Aligned_cols=107 Identities=15% Similarity=0.113 Sum_probs=71.9
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHHH
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLKE 82 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~~ 82 (298)
+..++.+.+.++++.+.+.|+..+.+.| || |+|..+ -.++++.+.+. ..+. +-.-+. ..+.+ ..+...+
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvp-ViaGvg-~~t~~ai~la~~A~~ 104 (316)
T 3e96_A 27 DGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRAL-VVAGIG-YATSTAIELGNAAKA 104 (316)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSE-EEEEEC-SSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCc-EEEEeC-cCHHHHHHHHHHHHh
Confidence 5789999999999999999999999987 99 888765 33555554432 2343 555553 34544 3566677
Q ss_pred cCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 83 SGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 83 ~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
.|.+.+.+.--. |. ..+-+.+++-++.+.++ ++ ++.+.
T Consensus 105 ~Gadavlv~~P~-----y~----~~s~~~l~~~f~~va~a~~l-PiilY 143 (316)
T 3e96_A 105 AGADAVMIHMPI-----HP----YVTAGGVYAYFRDIIEALDF-PSLVY 143 (316)
T ss_dssp HTCSEEEECCCC-----CS----CCCHHHHHHHHHHHHHHHTS-CEEEE
T ss_pred cCCCEEEEcCCC-----CC----CCCHHHHHHHHHHHHHhCCC-CEEEE
Confidence 799987765322 21 23567777777777664 67 66554
No 86
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=78.29 E-value=13 Score=32.72 Aligned_cols=83 Identities=13% Similarity=0.202 Sum_probs=55.1
Q ss_pred CCCCCCHHHHHHHHHHHHh-------CCCCEEEEcCCc---------cCccc-------------cHH-HHHHHHhccCC
Q 022377 11 KPQLLSLNEILRLAYLFVT-------SGVDKIRLTGGE---------PTVRK-------------DIE-EACFHLSKLKG 60 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~-------~~~~~v~~tGGE---------Pll~~-------------~~~-~ii~~~~~~~~ 60 (298)
...+||.+||.++++++.+ .|...|.+.||- |..+. .|. ++++.+++.-+
T Consensus 139 ~pr~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg 218 (362)
T 4ab4_A 139 TPRALETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWG 218 (362)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcC
Confidence 3568999999999876543 688999998876 76432 244 88888876422
Q ss_pred CCcEEEEeCcc----------ch---HhhHHHHHHcCCCeEEEecC
Q 022377 61 LKTLAMTTNGL----------TL---ARKLPKLKESGLTSVNISLD 93 (298)
Q Consensus 61 ~~~v~i~TNG~----------ll---~~~~~~l~~~~~~~v~iSld 93 (298)
-..+.+--++. .. .+.++.|.+.|++.|.+|--
T Consensus 219 ~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~ 264 (362)
T 4ab4_A 219 AQRVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSRER 264 (362)
T ss_dssp GGGEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCC
Confidence 11244433332 12 23467788889999999853
No 87
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=77.93 E-value=10 Score=32.06 Aligned_cols=106 Identities=16% Similarity=0.100 Sum_probs=71.1
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhccCCCCcEEEEeCccchHh---hHHHHHHc
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTLAR---KLPKLKES 83 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll~~---~~~~l~~~ 83 (298)
.+..++.+.+.++++.+.+. +..+...| || |+|..+ -.++++.+.+ .+. +-.-+.+..+.+ ..+...+.
T Consensus 12 ~dg~iD~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~--rvp-viaGvg~~~t~~ai~la~~A~~~ 87 (283)
T 2pcq_A 12 REGRLDEEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP--RKP-FLVGLMEETLPQAEGALLEAKAA 87 (283)
T ss_dssp TTCCBCHHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC--SSC-CEEEECCSSHHHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh--CCc-EEEeCCCCCHHHHHHHHHHHHhc
Confidence 45789999999999999988 99988877 99 677665 5588887776 443 444444444443 45666778
Q ss_pred CCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEE
Q 022377 84 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 130 (298)
Q Consensus 84 ~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 130 (298)
|.+.+.+.--.+ .+.. +-+.+.+-.+.+.+ ++ ++.+.
T Consensus 88 Gadavlv~~P~y-----~~~~---~~~~l~~~f~~va~-~l-PiilY 124 (283)
T 2pcq_A 88 GAMALLATPPRY-----YHGS---LGAGLLRYYEALAE-KM-PLFLY 124 (283)
T ss_dssp TCSEEEECCCCT-----TGGG---TTTHHHHHHHHHHH-HS-CEEEE
T ss_pred CCCEEEecCCcC-----CCCC---CHHHHHHHHHHHhc-CC-CEEEE
Confidence 999887764332 2210 23456666666666 77 76553
No 88
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=77.50 E-value=10 Score=31.93 Aligned_cols=58 Identities=17% Similarity=0.142 Sum_probs=44.8
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 73 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll 73 (298)
..+.+++.+.+.+..+.|-..+.+++|.|+++.-..++++.+.+. ++. +.+.-.-+..
T Consensus 75 ~~~~~~i~~~l~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~-gi~-veviPGiSs~ 132 (280)
T 1s4d_A 75 SPKQRDISLRLVELARAGNRVLRLKGGDPFVFGRGGEEALTLVEH-QVP-FRIVPGITAG 132 (280)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEESBCTTSSSSHHHHHHHHHTT-TCC-EEEECCCCTT
T ss_pred ccCHHHHHHHHHHHHhCCCeEEEEcCCCCccccCHHHHHHHHHHC-CCC-EEEEcCccHH
Confidence 467788887776666667678888999999998888899999884 885 8887655444
No 89
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=77.15 E-value=34 Score=29.24 Aligned_cols=109 Identities=17% Similarity=0.177 Sum_probs=72.8
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcC--Cc-cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccchHh---hHHHHH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTG--GE-PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTLAR---KLPKLK 81 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GE-Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll~~---~~~~l~ 81 (298)
.+..++.+.+.++++.+.+.|+..+.+.| || |.|..+ -.++++.+.+. ..+. +-.-+.+..+.+ ..+...
T Consensus 21 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvp-ViaGvg~~~t~~ai~la~~A~ 99 (311)
T 3h5d_A 21 EDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVP-LIAGVGTNDTRDSIEFVKEVA 99 (311)
T ss_dssp TTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSC-EEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCc-EEEeCCCcCHHHHHHHHHHHH
Confidence 45679999999999999999999999987 99 777664 44666655442 2343 655555545544 345566
Q ss_pred HcCC-CeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCCEEEE
Q 022377 82 ESGL-TSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV-GYNPVKVN 130 (298)
Q Consensus 82 ~~~~-~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~ 130 (298)
+.|. +.+.+.--.+ + ..+-+.+.+-.+.+.++ ++ ++.+.
T Consensus 100 ~~Ga~davlv~~P~y----~-----~~s~~~l~~~f~~va~a~~l-PiilY 140 (311)
T 3h5d_A 100 EFGGFAAGLAIVPYY----N-----KPSQEGMYQHFKAIADASDL-PIIIY 140 (311)
T ss_dssp HSCCCSEEEEECCCS----S-----CCCHHHHHHHHHHHHHSCSS-CEEEE
T ss_pred hcCCCcEEEEcCCCC----C-----CCCHHHHHHHHHHHHHhCCC-CEEEE
Confidence 6675 8777664332 1 13456778888888774 66 66554
No 90
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=77.02 E-value=6 Score=33.10 Aligned_cols=59 Identities=22% Similarity=0.268 Sum_probs=44.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchH
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA 74 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~ 74 (298)
.++.+++.+.+.+..+.|-..+.+++|.|+++.-..++++.+.+. ++. +.+.-.-+.+.
T Consensus 59 ~~~~~~~~~~i~~~~~~G~~Va~L~~GDP~iyg~~~~l~~~l~~~-gi~-veviPGiSs~~ 117 (264)
T 3ndc_A 59 PMSLDAIIDTIAEAHAAGQDVARLHSGDLSIWSAMGEQLRRLRAL-NIP-YDVTPGVPSFA 117 (264)
T ss_dssp TSCHHHHHHHHHHHHHHTCCEEEEESBCTTSSCSHHHHHHHHHHT-TCC-EEEECCCCHHH
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEEeCCCCccccHHHHHHHHHHhC-CCC-EEEeCCHHHHH
Confidence 477888777666665667677888999999999888899998884 885 88765554443
No 91
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=76.92 E-value=33 Score=29.23 Aligned_cols=26 Identities=19% Similarity=0.207 Sum_probs=12.9
Q ss_pred HHHHHHHhccCCCCcEEE-EeCccchHh
Q 022377 49 EEACFHLSKLKGLKTLAM-TTNGLTLAR 75 (298)
Q Consensus 49 ~~ii~~~~~~~~~~~v~i-~TNG~ll~~ 75 (298)
.++++.+.+. |...+.+ .|+|...++
T Consensus 160 ~~~~~~~~~~-Ga~~i~l~DT~G~~~P~ 186 (307)
T 1ydo_A 160 IRLSEALFEF-GISELSLGDTIGAANPA 186 (307)
T ss_dssp HHHHHHHHHH-TCSCEEEECSSCCCCHH
T ss_pred HHHHHHHHhc-CCCEEEEcCCCCCcCHH
Confidence 3555555553 4433333 366665543
No 92
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=76.79 E-value=29 Score=28.33 Aligned_cols=125 Identities=14% Similarity=0.185 Sum_probs=83.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-----H---hhHHHHHHc
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-----A---RKLPKLKES 83 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-----~---~~~~~l~~~ 83 (298)
+...+.+++.++++++.++++..|++ +|.+...+..++. .++. +..+. |+-+ . ...+...+.
T Consensus 23 ~p~~t~~~i~~lc~eA~~~~~~aVcV-------~p~~v~~a~~l~~-~~v~-v~tVi-gFP~G~~~~~~K~~E~~~Ai~~ 92 (231)
T 3ndo_A 23 KPEATPSDVTALVDEAADLGVFAVCV-------SPPLVSVAAGVAP-SGLA-IAAVA-GFPSGKHVPGIKATEAELAVAA 92 (231)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCSEEEE-------CGGGHHHHHHHCC-TTCE-EEEEE-STTTCCSCHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhCCcEEEE-------CHHHHHHHHHhcC-CCCe-EEEEe-cCCCCCCcHHHHHHHHHHHHHc
Confidence 46789999999999999999988886 5666666554433 3553 55443 3322 1 135666777
Q ss_pred CCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc--CCCCEEEEEEEecC-C----CHhHHHHHHHHHhhCCCee
Q 022377 84 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV--GYNPVKVNCVVMRG-F----NDDEICDFVELTRDRPINI 156 (298)
Q Consensus 84 ~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~--g~~~v~i~~vi~~~-~----n~~~i~~i~~~~~~~g~~~ 156 (298)
|.+.|.+-++-. .+. .+.|+.+.+-|..+++. +. .++ +.+-.+ . +.+++....+.+.+.|.++
T Consensus 93 GAdEIDmVinig------~lk-~g~~~~v~~ei~~v~~a~~~~-~lK--vIiEt~~L~~~~t~eei~~a~~ia~~aGADf 162 (231)
T 3ndo_A 93 GATEIDMVIDVG------AAL-AGDLDAVSADITAVRKAVRAA-TLK--VIVESAALLEFSGEPLLADVCRVARDAGADF 162 (231)
T ss_dssp TCSEEEEECCHH------HHH-TTCHHHHHHHHHHHHHHTTTS-EEE--EECCHHHHHHHTCHHHHHHHHHHHHHTTCSE
T ss_pred CCCEEEEEeehH------hhh-cccHHHHHHHHHHHHHHccCC-ceE--EEEECcccCCCCCHHHHHHHHHHHHHHCcCE
Confidence 999888887641 111 25688899988888886 33 333 222211 2 6778889999999999874
No 93
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=76.57 E-value=34 Score=28.96 Aligned_cols=127 Identities=13% Similarity=0.095 Sum_probs=85.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHH-HHhccCCCCcEEEEeC---ccch-H---hhHHHHHHcC
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACF-HLSKLKGLKTLAMTTN---GLTL-A---RKLPKLKESG 84 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~-~~~~~~~~~~v~i~TN---G~ll-~---~~~~~l~~~~ 84 (298)
...+.+++.++++++.++++..|++. |.+...+. .++. .++. +..+++ |... . ...+...+.|
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~-------P~~V~~a~~~L~~-s~V~-V~tVigFP~G~~~~~~Kv~Ea~~Ai~~G 139 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR-------PDYVSRAVQYLQG-TQVG-VTCVIGFHEGTYSTDQKVSEAKRAMQNG 139 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC-------GGGHHHHHHHTTT-SSCE-EEEEESTTTSCSCHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC-------HHHHHHHHHHcCC-CCCe-EEEEeCCCCCCCcHHHHHHHHHHHHHcC
Confidence 56899999999999999999999874 55554443 3433 4664 665554 3222 2 2356677789
Q ss_pred CCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecC-CCHhHHHHHHHHHhhCCCee
Q 022377 85 LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRG-FNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 85 ~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~-~n~~~i~~i~~~~~~~g~~~ 156 (298)
.+.|.+-++-. . + ..+.++.+.+-|+.+++.--.+ .+.+++-.+ .+.+++....+.+.+.|.++
T Consensus 140 AdEIDmVINig--~----l-k~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~ia~eaGADf 204 (288)
T 3oa3_A 140 ASELDMVMNYP--W----L-SEKRYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEIIAGCVLSSLAGADY 204 (288)
T ss_dssp CSEEEEECCHH--H----H-HTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHHHHTTCSE
T ss_pred CCEEEEEeehh--h----h-cCCcHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHHHHHHHHHHHcCCCE
Confidence 99998888642 1 1 1356899999999998862213 234443332 46788888899999999874
No 94
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=76.57 E-value=16 Score=34.80 Aligned_cols=101 Identities=7% Similarity=0.006 Sum_probs=70.6
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcC------C----ccCccccHHHHHHHHhccCCCCcEEEEeCccch----HhhHHH
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTG------G----EPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL----ARKLPK 79 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tG------G----EPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll----~~~~~~ 79 (298)
-++.+..++.|+.+.++|...|.+-- + +|--..++.++++|+++ +|+. +.+-.|..-+ ++.++.
T Consensus 305 g~n~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~-kgV~-i~lw~~~~~~~~~~~~~~~~ 382 (641)
T 3a24_A 305 GVNNPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAAS-KNVG-IILWAGYHAFERDMENVCRH 382 (641)
T ss_dssp SSSHHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHH-TTCE-EEEEEEHHHHHTSHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHh-cCCE-EEEEeeCcchHHHHHHHHHH
Confidence 47999999999999999999888742 1 22223569999999999 5986 7777665433 346788
Q ss_pred HHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCC
Q 022377 80 LKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGY 124 (298)
Q Consensus 80 l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~ 124 (298)
+.+.|++.|-+..=.-+.. ...+...+.++.+.++++
T Consensus 383 ~~~~Gv~gvK~Df~~~~~Q--------~~v~~y~~i~~~aA~~~l 419 (641)
T 3a24_A 383 YAEMGVKGFKVDFMDRDDQ--------EMTAFNYRAAEMCAKYKL 419 (641)
T ss_dssp HHHHTCCEEEEECCCCCSH--------HHHHHHHHHHHHHHHTTC
T ss_pred HHHcCCCEEEECCCCCCcH--------HHHHHHHHHHHHHHHcCC
Confidence 8889999888776321110 113444555567777776
No 95
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=76.48 E-value=26 Score=30.18 Aligned_cols=23 Identities=13% Similarity=0.276 Sum_probs=11.9
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEE
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRL 37 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~ 37 (298)
-+++.+.++++.+.+.|+..|.|
T Consensus 148 ~~~~~~~~~~~~~~~~G~~~i~l 170 (325)
T 3eeg_A 148 ADQAFLARMVEAVIEAGADVVNI 170 (325)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEC
T ss_pred chHHHHHHHHHHHHhcCCCEEEe
Confidence 34455555555555555555555
No 96
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=75.49 E-value=39 Score=29.17 Aligned_cols=101 Identities=15% Similarity=0.174 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHhCCCCEEEEcC-C---ccCcccc-HHHHHHHHhccCCCCcEEE-EeCccchHhh----HHHHHHcCCCe
Q 022377 18 NEILRLAYLFVTSGVDKIRLTG-G---EPTVRKD-IEEACFHLSKLKGLKTLAM-TTNGLTLARK----LPKLKESGLTS 87 (298)
Q Consensus 18 e~~~~~i~~~~~~~~~~v~~tG-G---EPll~~~-~~~ii~~~~~~~~~~~v~i-~TNG~ll~~~----~~~l~~~~~~~ 87 (298)
+.+...++.+++.|. .|.++- - ++-..++ +.++++.+.+. |...+.+ .|+|...++. ++.+++. +..
T Consensus 137 ~~~~~~v~~ak~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~-~p~ 213 (337)
T 3ble_A 137 TDVSFVIEYAIKSGL-KINVYLEDWSNGFRNSPDYVKSLVEHLSKE-HIERIFLPDTLGVLSPEETFQGVDSLIQK-YPD 213 (337)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEEETHHHHHHHCHHHHHHHHHHHHTS-CCSEEEEECTTCCCCHHHHHHHHHHHHHH-CTT
T ss_pred HHHHHHHHHHHHCCC-EEEEEEEECCCCCcCCHHHHHHHHHHHHHc-CCCEEEEecCCCCcCHHHHHHHHHHHHHh-cCC
Confidence 344445555556663 344331 0 1111233 34666666663 6554444 3777766543 3333332 212
Q ss_pred EEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEe
Q 022377 88 VNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVM 134 (298)
Q Consensus 88 v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~ 134 (298)
+.|++++.+ ++-..+.|.-.+.++|. . .+.+++.
T Consensus 214 ~~i~~H~Hn-----------d~GlA~AN~laAv~aGa-~-~vd~tv~ 247 (337)
T 3ble_A 214 IHFEFHGHN-----------DYDLSVANSLQAIRAGV-K-GLHASIN 247 (337)
T ss_dssp SCEEEECBC-----------TTSCHHHHHHHHHHTTC-S-EEEEBGG
T ss_pred CeEEEEecC-----------CcchHHHHHHHHHHhCC-C-EEEEecc
Confidence 455555532 11234455555555676 2 3344444
No 97
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=75.46 E-value=11 Score=31.05 Aligned_cols=59 Identities=20% Similarity=0.262 Sum_probs=45.6
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchH
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA 74 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~ 74 (298)
.++.+++.+.+.+..+.|-..+.+++|.|+++.-..++++.+.+. ++. +.+.-.-+.+.
T Consensus 60 ~~~~~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~-gi~-veviPGiSS~~ 118 (253)
T 4e16_A 60 HMDLQEIIDVMREGIENNKSVVRLQTGDFSIYGSIREQVEDLNKL-NID-YDCTPGVSSFL 118 (253)
T ss_dssp GCCHHHHHHHHHHHHHTTCCEEEEESBCTTTTCCHHHHHHHHHHH-TCC-EEEECCCCHHH
T ss_pred CCCHHHHHHHHHHHHHCCCcEEEEeCCCCccccCHHHHHHHHHHC-CCC-EEEECCHHHHH
Confidence 467788877776666677677888999999999888899998884 885 88876655443
No 98
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=74.55 E-value=32 Score=27.96 Aligned_cols=18 Identities=33% Similarity=0.386 Sum_probs=8.6
Q ss_pred hhHHHHHHcCCCeEEEec
Q 022377 75 RKLPKLKESGLTSVNISL 92 (298)
Q Consensus 75 ~~~~~l~~~~~~~v~iSl 92 (298)
+.++.+.+.|++.|.+..
T Consensus 26 ~~l~~~~~~G~~~vEl~~ 43 (262)
T 3p6l_A 26 EALDKTQELGLKYIEIYP 43 (262)
T ss_dssp HHHHHHHHTTCCEEEECT
T ss_pred HHHHHHHHcCCCEEeecC
Confidence 344444444555554443
No 99
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=72.84 E-value=42 Score=29.06 Aligned_cols=117 Identities=15% Similarity=0.177 Sum_probs=79.4
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcC--CccCcccc-HHHHHHHHhccC--CCCcEEEEe---CccchHhhHHHHHHcCC
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTG--GEPTVRKD-IEEACFHLSKLK--GLKTLAMTT---NGLTLARKLPKLKESGL 85 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tG--GEPll~~~-~~~ii~~~~~~~--~~~~v~i~T---NG~ll~~~~~~l~~~~~ 85 (298)
.-+++.+.++++.+.+.|+..|.+.+ |-- .|. +.++++.+++.. ++. +.+.+ -|.-+...+.. .++|.
T Consensus 145 ~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~--~P~~v~~lv~~l~~~~~~~~p-i~~H~Hn~~G~avAn~laA-~~aGa 220 (345)
T 1nvm_A 145 MIPAEKLAEQGKLMESYGATCIYMADSGGAM--SMNDIRDRMRAFKAVLKPETQ-VGMHAHHNLSLGVANSIVA-VEEGC 220 (345)
T ss_dssp SSCHHHHHHHHHHHHHHTCSEEEEECTTCCC--CHHHHHHHHHHHHHHSCTTSE-EEEECBCTTSCHHHHHHHH-HHTTC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCcCcc--CHHHHHHHHHHHHHhcCCCce-EEEEECCCccHHHHHHHHH-HHcCC
Confidence 34678888899988889988888853 432 254 668888887754 553 77653 35444444444 45699
Q ss_pred CeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhh
Q 022377 86 TSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 151 (298)
Q Consensus 86 ~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~ 151 (298)
+.|..|+.|..+ ..|..+.+.++.+++. .|+ . .|.+.+.+.++.+++.+
T Consensus 221 ~~vd~tv~GlG~-----~aGN~~le~lv~~L~~---~g~-~--------~~idl~~l~~~~~~~~~ 269 (345)
T 1nvm_A 221 DRVDASLAGMGA-----GAGNAPLEVFIAVAER---LGW-N--------HGTDLYTLMDAADDIVR 269 (345)
T ss_dssp CEEEEBGGGCSS-----TTCBCBHHHHHHHHHH---HTC-B--------CCSCHHHHHHHHHHTTG
T ss_pred CEEEecchhccC-----CccCcCHHHHHHHHHh---cCC-C--------CCCCHHHHHHHHHHHHH
Confidence 999999999864 2344458888777763 466 3 24788888888887754
No 100
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=72.49 E-value=21 Score=30.82 Aligned_cols=81 Identities=20% Similarity=0.254 Sum_probs=53.7
Q ss_pred CCCCCCHHHHHHHHHHHH-------hCCCCEEEEcCCc---------cCcc-------------ccH-HHHHHHHhccCC
Q 022377 11 KPQLLSLNEILRLAYLFV-------TSGVDKIRLTGGE---------PTVR-------------KDI-EEACFHLSKLKG 60 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~-------~~~~~~v~~tGGE---------Pll~-------------~~~-~~ii~~~~~~~~ 60 (298)
...+||.+|+..+++.+. +.|...|.+.+|- |..+ ..+ .++++.+++.-+
T Consensus 130 ~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~ 209 (338)
T 1z41_A 130 TPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWD 209 (338)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcC
Confidence 346799999988876553 4688889888764 5432 233 488888877434
Q ss_pred CCcEE--EEeC-----ccchH---hhHHHHHHcCCCeEEEec
Q 022377 61 LKTLA--MTTN-----GLTLA---RKLPKLKESGLTSVNISL 92 (298)
Q Consensus 61 ~~~v~--i~TN-----G~ll~---~~~~~l~~~~~~~v~iSl 92 (298)
+. +. |..+ |.-.+ +.++.|.+.|++.|.+|-
T Consensus 210 ~p-v~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~ 250 (338)
T 1z41_A 210 GP-LFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSS 250 (338)
T ss_dssp SC-EEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred Cc-EEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 43 44 4332 33332 456788889999999985
No 101
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=71.96 E-value=35 Score=29.95 Aligned_cols=117 Identities=12% Similarity=0.133 Sum_probs=75.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++..++++.+.++++..|. ||+- ++-.+..+.+++..++ -|.+++.+. .+.++++.+.+ .+.|++
T Consensus 199 ~~~~~~~a~~~~~~l~~~~i~~iE----qP~~-~~~~~~~~~l~~~~~i---PI~~de~i~~~~~~~~~i~~~~~d~v~i 270 (384)
T 2pgw_A 199 EGWSVHDAINMCRKLEKYDIEFIE----QPTV-SWSIPAMAHVREKVGI---PIVADQAAFTLYDVYEICRQRAADMICI 270 (384)
T ss_dssp TCCCHHHHHHHHHHHGGGCCSEEE----CCSC-TTCHHHHHHHHHHCSS---CEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEe----CCCC-hhhHHHHHHHHhhCCC---CEEEeCCcCCHHHHHHHHHcCCCCEEEE
Confidence 456889998999999888887775 7874 3334445555553344 467788766 45677776654 777777
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhC
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDR 152 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~ 152 (298)
.+. ..+++...++.++.+.++|+ ++.+.+. . .+.-.+...+.++...
T Consensus 271 k~~-----------~~GGit~~~~i~~~A~~~g~-~~~~~~~--~-es~i~~aa~~hlaaa~ 317 (384)
T 2pgw_A 271 GPR-----------EIGGIQPMMKAAAVAEAAGL-KICIHSS--F-TTGITTCAEHHIGLAI 317 (384)
T ss_dssp CHH-----------HHTSHHHHHHHHHHHHHTTC-CEEECCC--S-CCHHHHHHHHHHHHHC
T ss_pred cch-----------hhCCHHHHHHHHHHHHHCCC-eEeeccC--c-CCHHHHHHHHHHHHhC
Confidence 542 12568888999999999999 7655431 1 2322344455555443
No 102
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=71.28 E-value=15 Score=32.18 Aligned_cols=82 Identities=13% Similarity=0.165 Sum_probs=54.9
Q ss_pred CCCCCCHHHHHHHHHHHHh-------CCCCEEEEcCCc---------cCccc-------------cHH-HHHHHHhccCC
Q 022377 11 KPQLLSLNEILRLAYLFVT-------SGVDKIRLTGGE---------PTVRK-------------DIE-EACFHLSKLKG 60 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~-------~~~~~v~~tGGE---------Pll~~-------------~~~-~ii~~~~~~~~ 60 (298)
...+||.+||.++++++.+ .|...|.+.||- |..+. .|. ++++.+++.-+
T Consensus 147 ~pr~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg 226 (361)
T 3gka_A 147 TPRALELDEIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWS 226 (361)
T ss_dssp CCEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcC
Confidence 3568999999999876543 688999998876 76432 344 88888877422
Q ss_pred CCcEEEEeCcc----------ch---HhhHHHHHHcCCCeEEEec
Q 022377 61 LKTLAMTTNGL----------TL---ARKLPKLKESGLTSVNISL 92 (298)
Q Consensus 61 ~~~v~i~TNG~----------ll---~~~~~~l~~~~~~~v~iSl 92 (298)
-..+.+--++. .. .+.++.|.+.|++.|.+|-
T Consensus 227 ~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~ 271 (361)
T 3gka_A 227 AARVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARE 271 (361)
T ss_dssp GGGEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCeEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECC
Confidence 11244433331 12 2356778888999999985
No 103
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=70.56 E-value=16 Score=26.11 Aligned_cols=45 Identities=18% Similarity=0.230 Sum_probs=31.5
Q ss_pred HHHHHHHHHhCCCCEEEEc-CCccCccccHHHHHHHHhccCCCCcEEEE
Q 022377 20 ILRLAYLFVTSGVDKIRLT-GGEPTVRKDIEEACFHLSKLKGLKTLAMT 67 (298)
Q Consensus 20 ~~~~i~~~~~~~~~~v~~t-GGEPll~~~~~~ii~~~~~~~~~~~v~i~ 67 (298)
...+++.+ +.|-..+.++ .|.|++..-..++++.+++ .++. +.+.
T Consensus 69 ~~~i~~~~-~~G~~V~~l~d~GdP~i~~~~~~l~~~~~~-~gi~-v~vi 114 (117)
T 3hh1_A 69 VRQVIELL-EEGSDVALVTDAGTPAISDPGYTMASAAHA-AGLP-VVPV 114 (117)
T ss_dssp HHHHHHHH-HTTCCEEEEEETTSCGGGSTTHHHHHHHHH-TTCC-EEEE
T ss_pred HHHHHHHH-HCCCeEEEEecCCcCeEeccHHHHHHHHHH-CCCc-EEEe
Confidence 44445544 4465677778 8999998888888888887 4774 6553
No 104
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=69.78 E-value=52 Score=28.07 Aligned_cols=45 Identities=22% Similarity=0.245 Sum_probs=31.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCcc-----------ccHHHHHHHHhcc
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVR-----------KDIEEACFHLSKL 58 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~-----------~~~~~ii~~~~~~ 58 (298)
..+.+++...+..+...|++.|....|+|--. .+-.++++.+++.
T Consensus 82 ~~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~ 137 (310)
T 3apt_A 82 GQSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRER 137 (310)
T ss_dssp TSCHHHHHHHHHHHHHTTCCEEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 37888999999999999998877665554321 1345666666653
No 105
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=69.21 E-value=16 Score=32.34 Aligned_cols=138 Identities=9% Similarity=0.058 Sum_probs=84.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEc----CCcc-CccccHHHHHHHHhccCCCCcEEEEeCccchHh------hHHHHHHc
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLT----GGEP-TVRKDIEEACFHLSKLKGLKTLAMTTNGLTLAR------KLPKLKES 83 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~t----GGEP-ll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~------~~~~l~~~ 83 (298)
-+.++..+.|+.+.++|...|--+ -+++ .....+.++++++++. |+. +.+..|...+.+ .+..|++.
T Consensus 38 ~~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~-g~~-vi~DVsp~~~~~Lg~s~~dl~~f~~l 115 (385)
T 1x7f_A 38 STKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDN-NME-VILDVAPAVFDQLGISYSDLSFFAEL 115 (385)
T ss_dssp SCHHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHT-TCE-EEEEECTTCC------CCCTHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHC-CCE-EEEECCHHHHHHcCCCHHHHHHHHHc
Confidence 356777899999999996654322 2333 4445688999999995 995 999999987743 57899999
Q ss_pred CCCeEEEecCCCCHHhhhhhcCCC-------cHHHHHHHHHHHHHcCCC--CEEEEEEEec----CCCHhHHHHHHHHHh
Q 022377 84 GLTSVNISLDTLVPAKFEFLTRRK-------GHEKVMESINAAIEVGYN--PVKVNCVVMR----GFNDDEICDFVELTR 150 (298)
Q Consensus 84 ~~~~v~iSldg~~~~~~~~ir~~~-------~~~~v~~~i~~l~~~g~~--~v~i~~vi~~----~~n~~~i~~i~~~~~ 150 (298)
|++.+.+. +|++.+.-..+.... +-+...+-++.+.+++.. .+..---.-| |...+.+.+--++++
T Consensus 116 Gi~gLRLD-~Gf~~~eia~ls~n~~glkIeLNASt~~~~l~~l~~~~~n~~~l~acHNFYPr~~TGLs~~~f~~~n~~~k 194 (385)
T 1x7f_A 116 GADGIRLD-VGFDGLTEAKMTNNPYGLKIELNVSNDIAYLENILSHQANKSALIGCHNFYPQKFTGLPYDYFIRCSERFK 194 (385)
T ss_dssp TCSEEEES-SCCSSHHHHHHTTCTTCCEEEEETTSCSSHHHHHTTSSCCGGGEEEECCCBCSTTCSBCHHHHHHHHHHHH
T ss_pred CCCEEEEc-CCCCHHHHHHHhcCCCCCEEEEeCcCCHHHHHHHHHcCCChHHeEEeeccCCCCCCCCCHHHHHHHHHHHH
Confidence 99999998 666654433443321 001133445666666552 1211111111 334566777788888
Q ss_pred hCCCe
Q 022377 151 DRPIN 155 (298)
Q Consensus 151 ~~g~~ 155 (298)
+.|+.
T Consensus 195 ~~Gi~ 199 (385)
T 1x7f_A 195 KHGIR 199 (385)
T ss_dssp HTTCC
T ss_pred HCCCc
Confidence 88874
No 106
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=68.84 E-value=54 Score=28.30 Aligned_cols=71 Identities=15% Similarity=0.276 Sum_probs=50.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc--CC---------ccCcccc-HHHHHHHHhccCCCCcEEEEeCccchHhhHHHHH
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLT--GG---------EPTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLK 81 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~t--GG---------EPll~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~ 81 (298)
.-+.+++.+.++++.+.|...|.+. || .|.+.++ +..+++.+++. ++. +.+-..+. +.++...
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~-g~~-v~~H~~~~---~~i~~~~ 237 (403)
T 3gnh_A 163 SDSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMA-GIK-VAAHAHGA---SGIREAV 237 (403)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHT-TCE-EEEEECSH---HHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHC-CCE-EEEEeCCH---HHHHHHH
Confidence 3568899999999888887766654 43 5666665 55889998884 885 88877663 3366666
Q ss_pred HcCCCeEE
Q 022377 82 ESGLTSVN 89 (298)
Q Consensus 82 ~~~~~~v~ 89 (298)
++|.+.+.
T Consensus 238 ~~g~~~i~ 245 (403)
T 3gnh_A 238 RAGVDTIE 245 (403)
T ss_dssp HTTCSEEE
T ss_pred HhCCCEEe
Confidence 77776554
No 107
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=68.81 E-value=48 Score=27.29 Aligned_cols=112 Identities=11% Similarity=0.095 Sum_probs=64.6
Q ss_pred CHHHHHHHHHHHHhCCCCEEEE--cCCc--cCccccHHHHHHHHhccC-CCC-cEEEEeCccchHhhHHHHHHcCCCeEE
Q 022377 16 SLNEILRLAYLFVTSGVDKIRL--TGGE--PTVRKDIEEACFHLSKLK-GLK-TLAMTTNGLTLARKLPKLKESGLTSVN 89 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~--tGGE--Pll~~~~~~ii~~~~~~~-~~~-~v~i~TNG~ll~~~~~~l~~~~~~~v~ 89 (298)
++..+.+.++.+.+.|...+.+ --|- |-+.... ++++.+++.. .+. .+.+-++= ..+.++.+.++|.+.|.
T Consensus 38 D~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~-~~v~~lr~~~p~~~ldvHLmv~~--p~~~i~~~~~aGAd~it 114 (246)
T 3inp_A 38 DLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGP-MVLKALRDYGITAGMDVHLMVKP--VDALIESFAKAGATSIV 114 (246)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCH-HHHHHHHHHTCCSCEEEEEECSS--CHHHHHHHHHHTCSEEE
T ss_pred ChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCH-HHHHHHHHhCCCCeEEEEEeeCC--HHHHHHHHHHcCCCEEE
Confidence 4445566677777788776655 3233 5454332 4555555432 222 24333221 14578889999999999
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHH
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVE 147 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~ 147 (298)
|...+.+ .+.+.++.++++|. .+.+ .+.++...+.++++++
T Consensus 115 vH~Ea~~--------------~~~~~i~~ir~~G~-k~Gv--alnp~Tp~e~l~~~l~ 155 (246)
T 3inp_A 115 FHPEASE--------------HIDRSLQLIKSFGI-QAGL--ALNPATGIDCLKYVES 155 (246)
T ss_dssp ECGGGCS--------------CHHHHHHHHHTTTS-EEEE--EECTTCCSGGGTTTGG
T ss_pred Eccccch--------------hHHHHHHHHHHcCC-eEEE--EecCCCCHHHHHHHHh
Confidence 9866531 23455666678888 6655 5666545555554443
No 108
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=68.40 E-value=54 Score=27.70 Aligned_cols=26 Identities=23% Similarity=0.178 Sum_probs=13.0
Q ss_pred HHHHHHHhccCCCCcEEE-EeCccchHh
Q 022377 49 EEACFHLSKLKGLKTLAM-TTNGLTLAR 75 (298)
Q Consensus 49 ~~ii~~~~~~~~~~~v~i-~TNG~ll~~ 75 (298)
.++++.+.+. |...+.+ .|.|...+.
T Consensus 153 ~~~~~~~~~~-G~~~i~l~DT~G~~~P~ 179 (293)
T 3ewb_X 153 IEAVQTAIDA-GATVINIPDTVGYTNPT 179 (293)
T ss_dssp HHHHHHHHHT-TCCEEEEECSSSCCCHH
T ss_pred HHHHHHHHHc-CCCEEEecCCCCCCCHH
Confidence 3566655553 5443333 366665543
No 109
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=68.32 E-value=20 Score=31.03 Aligned_cols=75 Identities=16% Similarity=0.185 Sum_probs=51.1
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCc---c-C-cccc-HHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-C
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGE---P-T-VRKD-IEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-L 85 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGE---P-l-l~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~ 85 (298)
-++.++...+++.+.+.|+..|.+++|- . . ..+. ..++++.+++..++ -+..||-+. .+.++++.+.| .
T Consensus 225 g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~i---PVi~~Ggi~s~~~a~~~l~~G~a 301 (338)
T 1z41_A 225 GLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADM---ATGAVGMITDGSMAEEILQNGRA 301 (338)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCC---EEEECSSCCSHHHHHHHHHTTSC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCC---CEEEECCCCCHHHHHHHHHcCCc
Confidence 4678888899999999999999998762 1 0 1222 34666666664343 455666554 56777787877 8
Q ss_pred CeEEEe
Q 022377 86 TSVNIS 91 (298)
Q Consensus 86 ~~v~iS 91 (298)
|.|.+.
T Consensus 302 D~V~iG 307 (338)
T 1z41_A 302 DLIFIG 307 (338)
T ss_dssp SEEEEC
T ss_pred eEEeec
Confidence 888876
No 110
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=68.29 E-value=70 Score=29.03 Aligned_cols=114 Identities=22% Similarity=0.340 Sum_probs=63.1
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEc---CCccCcccc-HHHHHHHHhccCCCCcEEEEe---CccchHhhHHHHHHcCCCeE
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLT---GGEPTVRKD-IEEACFHLSKLKGLKTLAMTT---NGLTLARKLPKLKESGLTSV 88 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~t---GGEPll~~~-~~~ii~~~~~~~~~~~v~i~T---NG~ll~~~~~~l~~~~~~~v 88 (298)
+++.+.++++++.+.|+..|+|. |+ +.|. +.++++.+++..++. +.+-+ -|.-+...+..+ ++|++.|
T Consensus 156 ~~e~~~~~a~~l~~~Gad~I~l~DT~G~---~~P~~v~~lv~~l~~~~~~~-i~~H~Hnd~GlAvAN~laAv-~AGa~~V 230 (464)
T 2nx9_A 156 NLQTWVDVAQQLAELGVDSIALKDMAGI---LTPYAAEELVSTLKKQVDVE-LHLHCHSTAGLADMTLLKAI-EAGVDRV 230 (464)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTSC---CCHHHHHHHHHHHHHHCCSC-EEEEECCTTSCHHHHHHHHH-HTTCSEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCC---cCHHHHHHHHHHHHHhcCCe-EEEEECCCCChHHHHHHHHH-HhCCCEE
Confidence 66777777777777777777773 32 3343 446666655533453 55553 333333333333 4577777
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhh
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 151 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~ 151 (298)
..|+.|..+ ..|..+.+.++.+++. .|+ .. |.+.+.+.++.+++.+
T Consensus 231 D~ti~g~ge-----rtGN~~lE~lv~~L~~---~g~-~t--------gidl~~L~~is~~v~~ 276 (464)
T 2nx9_A 231 DTAISSMSG-----TYGHPATESLVATLQG---TGY-DT--------GLDIAKLEQIAAYFRD 276 (464)
T ss_dssp EEBCGGGCS-----TTSCCBHHHHHHHHTT---STT-CC--------CCCHHHHHHHHHHHHH
T ss_pred EEeccccCC-----CCcCHHHHHHHHHHHh---cCC-Cc--------ccCHHHHHHHHHHHHH
Confidence 777776542 1344446666666654 455 21 3566666666665544
No 111
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=67.95 E-value=50 Score=27.20 Aligned_cols=128 Identities=15% Similarity=0.183 Sum_probs=65.6
Q ss_pred HHHHHHHHHhCCCCEEEEcCCc-cCccc-cHHHHHHHHhccCCCCcEEEEeCcc----ch--------------HhhHHH
Q 022377 20 ILRLAYLFVTSGVDKIRLTGGE-PTVRK-DIEEACFHLSKLKGLKTLAMTTNGL----TL--------------ARKLPK 79 (298)
Q Consensus 20 ~~~~i~~~~~~~~~~v~~tGGE-Pll~~-~~~~ii~~~~~~~~~~~v~i~TNG~----ll--------------~~~~~~ 79 (298)
+...++.+.+.|...|.+.... |-+.+ ++.++-+.+++ .|+. +...+... +. .+.++.
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~-~gl~-i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~ 96 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHG-NGIT-LTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKR 96 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHH-TTCE-EEEEECCCGGGCTTCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHH-cCCe-EEEeecCCCCcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3445666677899999998654 22223 35577777777 4885 65422110 11 123444
Q ss_pred HHHcCCCeEEEecCCCCHHhhh-hhcCCCcHHHHHHHHHHHHH----cCCCCEEEEEEEe-cC---CCHhHHHHHHHHHh
Q 022377 80 LKESGLTSVNISLDTLVPAKFE-FLTRRKGHEKVMESINAAIE----VGYNPVKVNCVVM-RG---FNDDEICDFVELTR 150 (298)
Q Consensus 80 l~~~~~~~v~iSldg~~~~~~~-~ir~~~~~~~v~~~i~~l~~----~g~~~v~i~~vi~-~~---~n~~~i~~i~~~~~ 150 (298)
....|...|.+.+.+.-+..+. .......++.+.+.++.+.+ .|+ .+.+...-. ++ .+.+++.++++-+.
T Consensus 97 a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lEn~~~~~~~~~~~~~~~~~l~~~v~ 175 (294)
T 3vni_A 97 LYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGV-DFCLEVLNRFENYLINTAQEGVDFVKQVD 175 (294)
T ss_dssp HHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTC-EEEEECCCTTTCSSCCSHHHHHHHHHHHC
T ss_pred HHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-EEEEEecCcccCcccCCHHHHHHHHHHcC
Confidence 5556888887655542211111 00011236666666666554 577 666554321 11 13445555555544
No 112
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=67.50 E-value=56 Score=27.56 Aligned_cols=122 Identities=16% Similarity=0.168 Sum_probs=70.4
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc--CCccCcccc-HHHHHHHHhccC-CCCcEEEEe---CccchHhhHHHHHHcCCC
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLT--GGEPTVRKD-IEEACFHLSKLK-GLKTLAMTT---NGLTLARKLPKLKESGLT 86 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~t--GGEPll~~~-~~~ii~~~~~~~-~~~~v~i~T---NG~ll~~~~~~l~~~~~~ 86 (298)
.-+++.+.++++.+.+.|+..|.|. -| .+.|. +.++++.+++.. ++. +.+.+ -|.-+...+.. .++|.+
T Consensus 152 ~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G--~~~P~~~~~lv~~l~~~~~~~~-i~~H~Hn~~Gla~An~laA-~~aGa~ 227 (298)
T 2cw6_A 152 KISPAKVAEVTKKFYSMGCYEISLGDTIG--VGTPGIMKDMLSAVMQEVPLAA-LAVHCHDTYGQALANTLMA-LQMGVS 227 (298)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEEETTS--CCCHHHHHHHHHHHHHHSCGGG-EEEEEBCTTSCHHHHHHHH-HHTTCC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEecCCCC--CcCHHHHHHHHHHHHHhCCCCe-EEEEECCCCchHHHHHHHH-HHhCCC
Confidence 3577778888888888887777774 33 34454 457777666533 342 55553 23323333333 356888
Q ss_pred eEEEecCCCCHHhhhhh-cCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhh
Q 022377 87 SVNISLDTLVPAKFEFL-TRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 151 (298)
Q Consensus 87 ~v~iSldg~~~~~~~~i-r~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~ 151 (298)
.|..|+.|..+=-|..- .|.-..+.++..++. .|+ .. +.+.+.+.++.+++.+
T Consensus 228 ~vd~tv~GlG~cp~a~g~aGN~~~E~lv~~l~~---~g~-~~--------~idl~~l~~~~~~~~~ 281 (298)
T 2cw6_A 228 VVDSSVAGLGGCPYAQGASGNLATEDLVYMLEG---LGI-HT--------GVNLQKLLEAGNFICQ 281 (298)
T ss_dssp EEEEBTTSCCCCTTSCSSCCBCBHHHHHHHHHH---HTC-BC--------CCCHHHHHHHHHHHHH
T ss_pred EEEeecccccCCCCCCCCcCChhHHHHHHHHHh---cCC-CC--------CcCHHHHHHHHHHHHH
Confidence 88888887654122221 233336666666653 465 31 4677777777776655
No 113
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=67.36 E-value=33 Score=28.61 Aligned_cols=110 Identities=12% Similarity=0.121 Sum_probs=62.1
Q ss_pred HHHHHHHHhccCCCCcEEEEeCccch----HhhHHHHHHcCCCeEEEecCCCCH---------HhhhhhcCCCcHHHHHH
Q 022377 48 IEEACFHLSKLKGLKTLAMTTNGLTL----ARKLPKLKESGLTSVNISLDTLVP---------AKFEFLTRRKGHEKVME 114 (298)
Q Consensus 48 ~~~ii~~~~~~~~~~~v~i~TNG~ll----~~~~~~l~~~~~~~v~iSldg~~~---------~~~~~ir~~~~~~~v~~ 114 (298)
+.+..+.+++......+...|.|.-- .+.++.|.++|.|.|.+.+---+| ...+.+..+-+.+++++
T Consensus 5 i~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~ 84 (267)
T 3vnd_A 5 YQAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFD 84 (267)
T ss_dssp HHHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHH
Confidence 33455555442111135566888752 245777888888888888554333 12233445556888888
Q ss_pred HHHHHHHc--CCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCeeEEE
Q 022377 115 SINAAIEV--GYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFI 159 (298)
Q Consensus 115 ~i~~l~~~--g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~~~~~ 159 (298)
.++.+++. .+ ++.+.+-..+ .-.-.++.+++-+.+.|++...+
T Consensus 85 ~v~~ir~~~~~~-Pivlm~Y~np-v~~~g~e~f~~~~~~aGvdgvii 129 (267)
T 3vnd_A 85 IITKVRAQHPDM-PIGLLLYANL-VFANGIDEFYTKAQAAGVDSVLI 129 (267)
T ss_dssp HHHHHHHHCTTC-CEEEEECHHH-HHHHCHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHhcCCCC-CEEEEecCcH-HHHhhHHHHHHHHHHcCCCEEEe
Confidence 88888875 44 5433221111 00123577777777778764444
No 114
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=67.21 E-value=20 Score=31.56 Aligned_cols=138 Identities=12% Similarity=0.124 Sum_probs=88.0
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEc----CCcc-CccccHHHHHHHHhccCCCCcEEEEeCccchHh------hHHHHHHc
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLT----GGEP-TVRKDIEEACFHLSKLKGLKTLAMTTNGLTLAR------KLPKLKES 83 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~t----GGEP-ll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~------~~~~l~~~ 83 (298)
-+.++..+.|+.+.++|...|--+ -+++ .....+.++++++++. |+. +.+..|...+.+ .+..|.+.
T Consensus 14 ~~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~-g~~-vi~DIsp~~l~~Lg~s~~dl~~~~~l 91 (372)
T 2p0o_A 14 EITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAE-KMK-IMVDISGEALKRAGFSFDELEPLIEL 91 (372)
T ss_dssp CCCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHH-TCE-EEEEECHHHHHTTTCBTTBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHC-CCE-EEEECCHHHHHHcCCCHHHHHHHHHc
Confidence 345566689999999997765433 2444 3445688999999996 995 999999988753 57899999
Q ss_pred CCCeEEEecCCCCHHhhhhhcCCC----cHHH-HHHHHHHHHHcCCC--CEEEEEEEec----CCCHhHHHHHHHHHhhC
Q 022377 84 GLTSVNISLDTLVPAKFEFLTRRK----GHEK-VMESINAAIEVGYN--PVKVNCVVMR----GFNDDEICDFVELTRDR 152 (298)
Q Consensus 84 ~~~~v~iSldg~~~~~~~~ir~~~----~~~~-v~~~i~~l~~~g~~--~v~i~~vi~~----~~n~~~i~~i~~~~~~~ 152 (298)
|++.+.+. +|++.+.-..+...- +-+. ..+-++.+.+++.. .+..-.-.-| |...+.+.+--+++++.
T Consensus 92 Gi~glRLD-~Gf~~~eia~ls~nlkIeLNASti~~~~l~~l~~~~~n~~~l~a~HNFYPr~~TGLs~~~f~~~n~~~k~~ 170 (372)
T 2p0o_A 92 GVTGLRMD-YGITIEQMAHASHKIDIGLNASTITLEEVAELKAHQADFSRLEAWHNYYPRPETGIGTTFFNEKNRWLKEL 170 (372)
T ss_dssp TCCEEEEC-SSCCHHHHHHHHTTSEEEEETTTCCHHHHHHHHHTTCCGGGEEEECCCCCSTTCSBCHHHHHHHHHHHHHT
T ss_pred CCCEEEEc-CCCCHHHHHHHhcCCEEEEECccCCHHHHHHHHHcCCChHHeEEeeccCCCCCCCCCHHHHHHHHHHHHHC
Confidence 99999999 677775444443211 0111 33456666666652 1211111111 33456788888888888
Q ss_pred CCe
Q 022377 153 PIN 155 (298)
Q Consensus 153 g~~ 155 (298)
|+.
T Consensus 171 Gi~ 173 (372)
T 2p0o_A 171 GLQ 173 (372)
T ss_dssp TCE
T ss_pred CCc
Confidence 874
No 115
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=67.17 E-value=51 Score=27.23 Aligned_cols=105 Identities=17% Similarity=0.293 Sum_probs=68.6
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCC---ccCcc-ccHHHHHHHHhccCCCCcEEEEeCccch-H-----hhHHHHHHc
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGG---EPTVR-KDIEEACFHLSKLKGLKTLAMTTNGLTL-A-----RKLPKLKES 83 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGG---EPll~-~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~-----~~~~~l~~~ 83 (298)
.++.+.+.+.|+.+.++|+ -..+|| |-.+. ..+.+.++.+++. |+..+.| |+|++- + +.++++.+.
T Consensus 51 l~~~~~l~eki~l~~~~gV--~v~~GGTl~E~~~~qg~~~~yl~~~k~l-Gf~~iEi-S~G~i~l~~~~~~~~I~~~~~~ 126 (251)
T 1qwg_A 51 VIDRDVVKEKINYYKDWGI--KVYPGGTLFEYAYSKGKFDEFLNECEKL-GFEAVEI-SDGSSDISLEERNNAIKRAKDN 126 (251)
T ss_dssp GSCHHHHHHHHHHHHTTTC--EEEECHHHHHHHHHTTCHHHHHHHHHHH-TCCEEEE-CCSSSCCCHHHHHHHHHHHHHT
T ss_pred ecCHHHHHHHHHHHHHcCC--eEECCcHHHHHHHHcCcHHHHHHHHHHc-CCCEEEE-CCCcccCCHHHHHHHHHHHHHC
Confidence 3667778889998888772 234466 54443 4588999999996 9874555 888764 2 236777777
Q ss_pred CCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 84 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 84 ~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
|+. +..-+-.-+++.. ...+-+..++.++...++|...|
T Consensus 127 G~~-v~~EvG~k~~~~~----~~~~~~~~I~~~~~~LeAGA~~V 165 (251)
T 1qwg_A 127 GFM-VLTEVGKKMPDKD----KQLTIDDRIKLINFDLDAGADYV 165 (251)
T ss_dssp TCE-EEEEECCSSHHHH----TTCCHHHHHHHHHHHHHHTCSEE
T ss_pred CCE-EeeeccccCCccc----CCCCHHHHHHHHHHHHHCCCcEE
Confidence 776 4333322222221 23457899999999999998333
No 116
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=65.96 E-value=14 Score=28.07 Aligned_cols=28 Identities=14% Similarity=0.076 Sum_probs=23.4
Q ss_pred CccccHHHHHHHHhccCCCCcEEEEeCccc
Q 022377 43 TVRKDIEEACFHLSKLKGLKTLAMTTNGLT 72 (298)
Q Consensus 43 ll~~~~~~ii~~~~~~~~~~~v~i~TNG~l 72 (298)
-+.|+..++++.+++. |+. +.+.||+..
T Consensus 27 ~~~~g~~~~l~~L~~~-g~~-~~i~Tn~~~ 54 (179)
T 3l8h_A 27 IALPGSLQAIARLTQA-DWT-VVLATNQSG 54 (179)
T ss_dssp CBCTTHHHHHHHHHHT-TCE-EEEEEECTT
T ss_pred eECcCHHHHHHHHHHC-CCE-EEEEECCCc
Confidence 3567899999999984 995 999999974
No 117
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=65.48 E-value=27 Score=31.28 Aligned_cols=82 Identities=12% Similarity=0.175 Sum_probs=55.4
Q ss_pred CCCCCHHHHHHHHHHHHh-------CCCCEEEEcCCc---------cCccc--------------cHH-HHHHHHhccC-
Q 022377 12 PQLLSLNEILRLAYLFVT-------SGVDKIRLTGGE---------PTVRK--------------DIE-EACFHLSKLK- 59 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~-------~~~~~v~~tGGE---------Pll~~--------------~~~-~ii~~~~~~~- 59 (298)
..+||.+||.++++.+.+ .|...|.+.||- |..+. .|. ++++.+++.-
T Consensus 157 pr~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~ 236 (419)
T 3l5a_A 157 VIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVID 236 (419)
T ss_dssp EEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHh
Confidence 468999999999886543 688999999886 76432 243 7887776631
Q ss_pred -----CCCcEEEEeC---------ccchH---hhHHHHHH-cCCCeEEEecCC
Q 022377 60 -----GLKTLAMTTN---------GLTLA---RKLPKLKE-SGLTSVNISLDT 94 (298)
Q Consensus 60 -----~~~~v~i~TN---------G~ll~---~~~~~l~~-~~~~~v~iSldg 94 (298)
++. |.+=-+ |...+ +.++.|.+ +|++.|.||--+
T Consensus 237 ~~~~~~f~-v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~ 288 (419)
T 3l5a_A 237 KEAPDNFI-LGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWG 288 (419)
T ss_dssp HHCCTTCE-EEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTT
T ss_pred hhcCCCee-EEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCC
Confidence 332 443322 44443 34677888 899999999643
No 118
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=64.97 E-value=54 Score=26.47 Aligned_cols=128 Identities=13% Similarity=0.115 Sum_probs=84.9
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch----H----hhHHHHHHc
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL----A----RKLPKLKES 83 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll----~----~~~~~l~~~ 83 (298)
+...+.+++.++++++.++++..|+ ++|.+...+....+..++. +..++ |+-+ . ..++...+.
T Consensus 13 ~p~~t~~~i~~l~~~a~~~~~~aVc-------v~p~~v~~~~~~l~~~~v~-v~~vi-gFP~G~~~~~~k~~e~~~Ai~~ 83 (220)
T 1ub3_A 13 KPTATLEEVAKAAEEALEYGFYGLC-------IPPSYVAWVRARYPHAPFR-LVTVV-GFPLGYQEKEVKALEAALACAR 83 (220)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCSEEE-------CCGGGHHHHHHHCTTCSSE-EEEEE-STTTCCSCHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEE-------ECHHHHHHHHHHhCCCCce-EEEEe-cCCCCCCchHHHHHHHHHHHHc
Confidence 4567999999999999999988887 4566665544332223564 66555 3322 1 235666778
Q ss_pred CCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecC-CCHhHHHHHHHHHhhCCCee
Q 022377 84 GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRG-FNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 84 ~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~-~n~~~i~~i~~~~~~~g~~~ 156 (298)
|.+.|.+-++-. . + ..+.++.+++-|..+.+.-- ...+.+.+-.+ .+.+++....+.+.+.|.++
T Consensus 84 GAdevd~vinig-~-----~-~~g~~~~v~~ei~~v~~a~~-~~~lkvIlet~~l~~e~i~~a~~ia~eaGADf 149 (220)
T 1ub3_A 84 GADEVDMVLHLG-R-----A-KAGDLDYLEAEVRAVREAVP-QAVLKVILETGYFSPEEIARLAEAAIRGGADF 149 (220)
T ss_dssp TCSEEEEECCHH-H-----H-HTTCHHHHHHHHHHHHHHST-TSEEEEECCGGGSCHHHHHHHHHHHHHHTCSE
T ss_pred CCCEEEecccch-h-----h-hCCCHHHHHHHHHHHHHHHc-CCCceEEEecCCCCHHHHHHHHHHHHHhCCCE
Confidence 999998888642 1 1 12468999999999988632 22333222211 46788999999999999875
No 119
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=64.65 E-value=22 Score=28.88 Aligned_cols=114 Identities=13% Similarity=0.163 Sum_probs=70.3
Q ss_pred HHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEE-ecCCCCHHhh
Q 022377 22 RLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNI-SLDTLVPAKF 100 (298)
Q Consensus 22 ~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~i-Sldg~~~~~~ 100 (298)
+.++.+.+.|...|++.+ |.. .++.+.++.+++. |++ +.+..|...-.+.++.+.+ .++.|.+ |++ +-
T Consensus 78 ~~i~~~~~aGad~itvH~-Ea~--~~~~~~i~~i~~~-G~k-~gval~p~t~~e~l~~~l~-~~D~Vl~msv~---pG-- 146 (228)
T 3ovp_A 78 QWVKPMAVAGANQYTFHL-EAT--ENPGALIKDIREN-GMK-VGLAIKPGTSVEYLAPWAN-QIDMALVMTVE---PG-- 146 (228)
T ss_dssp GGHHHHHHHTCSEEEEEG-GGC--SCHHHHHHHHHHT-TCE-EEEEECTTSCGGGTGGGGG-GCSEEEEESSC---TT--
T ss_pred HHHHHHHHcCCCEEEEcc-CCc--hhHHHHHHHHHHc-CCC-EEEEEcCCCCHHHHHHHhc-cCCeEEEeeec---CC--
Confidence 456677778888999975 654 3567888889884 885 8998886443455555555 3776653 442 21
Q ss_pred hhhcCCCcH-HHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCee
Q 022377 101 EFLTRRKGH-EKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 101 ~~ir~~~~~-~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~~ 156 (298)
+ ++..| ...++.++.+++... .+ .+.+..|.|.+.+.++++ .|+++
T Consensus 147 --f-~Gq~f~~~~l~ki~~lr~~~~-~~--~I~VdGGI~~~t~~~~~~----aGAd~ 193 (228)
T 3ovp_A 147 --F-GGQKFMEDMMPKVHWLRTQFP-SL--DIEVDGGVGPDTVHKCAE----AGANM 193 (228)
T ss_dssp --T-CSCCCCGGGHHHHHHHHHHCT-TC--EEEEESSCSTTTHHHHHH----HTCCE
T ss_pred --C-CCcccCHHHHHHHHHHHHhcC-CC--CEEEeCCcCHHHHHHHHH----cCCCE
Confidence 1 11222 345666788887654 33 345566777766665544 56654
No 120
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=63.92 E-value=68 Score=27.29 Aligned_cols=120 Identities=11% Similarity=0.108 Sum_probs=63.8
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCcc-----ccHHHHHHHHhccCCCCcEEEEeCcc------chHhhHHHH--
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVR-----KDIEEACFHLSKLKGLKTLAMTTNGL------TLARKLPKL-- 80 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~-----~~~~~ii~~~~~~~~~~~v~i~TNG~------ll~~~~~~l-- 80 (298)
..+.+++...+..+...|++.|-.-.|+|--. .+-.++++.+++..++ .+++..+.. ..+..++.|
T Consensus 93 ~~~~~~l~~~L~~~~~~GI~nILaLrGDpp~~~~~~~~~A~dLv~~ir~~~~f-~IgvA~yPE~Hp~a~~~~~d~~~Lk~ 171 (304)
T 3fst_A 93 DATPDELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADF-DISVAAYPEVHPEAKSAQADLLNLKR 171 (304)
T ss_dssp TSCHHHHHHHHHHHHHTTCCEEEEECCCCC------CCCHHHHHHHHHHHCCC-EEEEEECTTCCTTCSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCCCCCCCCCHHHHHHHHHHcCCC-eEEEEeCCCcCCCCCCHHHHHHHHHH
Confidence 46888888888888888888877666664321 1244677766664455 355554321 121122222
Q ss_pred -HHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHH
Q 022377 81 -KESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVEL 148 (298)
Q Consensus 81 -~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~ 148 (298)
.++|.+. .|+--.++.+ ...+-++.+++.|+ .+-|-.-++|=.|...+..+.++
T Consensus 172 KvdAGAdf-~iTQ~ffD~~------------~~~~f~~~~r~~Gi-~vPIi~GImPi~s~~~~~~~~~~ 226 (304)
T 3fst_A 172 KVDAGANR-AITQFFFDVE------------SYLRFRDRCVSAGI-DVEIIPGILPVSNFKQAKKLADM 226 (304)
T ss_dssp HHHHTCCE-EEECCCSCHH------------HHHHHHHHHHHTTC-CSCEECEECCCSCHHHHHHHHHH
T ss_pred HHHcCCCE-EEeCccCCHH------------HHHHHHHHHHhcCC-CCcEEEEecccCCHHHHHHHHHc
Confidence 2456663 3332333333 34445556666666 44444444442455666555433
No 121
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=63.86 E-value=17 Score=30.84 Aligned_cols=58 Identities=21% Similarity=0.204 Sum_probs=42.5
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 73 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll 73 (298)
.++.+++.+.+.+..+.|-..+.+.+|.|+++.-..++++.+.+. ++. +.+.-.-+.+
T Consensus 85 ~~~~~~i~~~l~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~-gi~-vevIPGiSS~ 142 (294)
T 2ybo_A 85 SLPQEEINELLVRLARQQRRVVRLKGGDPFIFGRGAEELERLLEA-GVD-CQVVPGVTAA 142 (294)
T ss_dssp --CHHHHHHHHHHHHHTTCCEEEEEEBCTTSSSSHHHHHHHHHHT-TCC-EEEECCCCHH
T ss_pred cCCHHHHHHHHHHHHHCCCeEEEEcCCCCCccCCHHHHHHHHHHC-CCC-EEEECCHHHH
Confidence 456777776665555667677778899999998888888988884 885 8887655544
No 122
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=63.54 E-value=69 Score=27.26 Aligned_cols=102 Identities=15% Similarity=0.169 Sum_probs=66.4
Q ss_pred hhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCC
Q 022377 75 RKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPI 154 (298)
Q Consensus 75 ~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~ 154 (298)
+.++.|...+.+.|+|. |+.. +..-...++....+++.|+ .+....+... .|..++.+++.-+.+.|+
T Consensus 33 ~~~~~L~~~~pd~vsVT-~~~~---------g~~r~~t~~~a~~i~~~g~-~~i~Hltc~~-~~~~~l~~~L~~~~~~GI 100 (310)
T 3apt_A 33 RTLEELKAFRPAFVSIT-YGAM---------GSTRERSVAWAQRIQSLGL-NPLAHLTVAG-QSRKEVAEVLHRFVESGV 100 (310)
T ss_dssp HHHHHHGGGCCSEEEEC-CCST---------TCSHHHHHHHHHHHHHTTC-CBCEEEECTT-SCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCCEEEEe-cCCC---------CCcchhHHHHHHHHHHhCC-CeEEEeecCC-CCHHHHHHHHHHHHHCCC
Confidence 45677777778988887 4432 2335567778888888899 7777776665 899999999999999998
Q ss_pred e-eEEEeeecCCC-CCCcc--cCCCCHHHHHHHHHHhC
Q 022377 155 N-IRFIEFMPFDG-NVWNV--KKLVPYAEMLDTVVKKF 188 (298)
Q Consensus 155 ~-~~~~~~~p~~~-~~~~~--~~~~~~~e~~~~i~~~~ 188 (298)
. +-.+.==|... ..|.. ..+....++++.+++.+
T Consensus 101 ~niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~ 138 (310)
T 3apt_A 101 ENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERY 138 (310)
T ss_dssp CEEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhC
Confidence 4 32221112222 22322 12335678888887763
No 123
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=63.25 E-value=60 Score=28.82 Aligned_cols=99 Identities=14% Similarity=0.128 Sum_probs=66.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCcc-CccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEP-TVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSV 88 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEP-ll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v 88 (298)
+.-.+.++..++++.+.++++..|- || +-..++. -.+.+++..++. |.+..+.. ...++.+.+.+ ++.|
T Consensus 221 N~~~~~~~A~~~~~~L~~~~i~~iE----qP~~~~~~~~-~~~~l~~~~~iP---Ia~dE~~~~~~~~~~~l~~~~~d~v 292 (410)
T 3dip_A 221 HSLWGTHAAARICNALADYGVLWVE----DPIAKMDNIP-AVADLRRQTRAP---ICGGENLAGTRRFHEMLCADAIDFV 292 (410)
T ss_dssp TTCBCHHHHHHHHHHGGGGTCSEEE----CCBSCTTCHH-HHHHHHHHHCCC---EEECTTCCSHHHHHHHHHTTCCSEE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE----CCCCCcccHH-HHHHHHhhCCCC---EEecCCcCCHHHHHHHHHcCCCCeE
Confidence 4557888888888888888877776 78 4444443 334454433553 55666555 34566666654 6777
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEE
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 130 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 130 (298)
++.+.- .+++..+++....+.++|+ ++.+.
T Consensus 293 ~~k~~~-----------~GGit~~~~ia~~A~~~gi-~~~~h 322 (410)
T 3dip_A 293 MLDLTW-----------CGGLSEGRKIAALAETHAR-PLAPH 322 (410)
T ss_dssp EECTTT-----------SSCHHHHHHHHHHHHHTTC-CEEEC
T ss_pred eecccc-----------cCCHHHHHHHHHHHHHcCC-EEeee
Confidence 776532 3578899999999999999 66543
No 124
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=63.19 E-value=47 Score=27.23 Aligned_cols=108 Identities=17% Similarity=0.120 Sum_probs=57.6
Q ss_pred HHHHHHHHHhCCCCEEEEcCCccCcc--ccHHHHHHHHhccCCCCcEEEEeC-c--c-ch--------------HhhHHH
Q 022377 20 ILRLAYLFVTSGVDKIRLTGGEPTVR--KDIEEACFHLSKLKGLKTLAMTTN-G--L-TL--------------ARKLPK 79 (298)
Q Consensus 20 ~~~~i~~~~~~~~~~v~~tGGEPll~--~~~~~ii~~~~~~~~~~~v~i~TN-G--~-ll--------------~~~~~~ 79 (298)
+...++.+.+.|...|.+....|... .++.++.+.+.+. |+. +...+. + . +. .+.++.
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~-gl~-~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~ 96 (290)
T 2qul_A 19 FPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDL-GLT-VMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDD 96 (290)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHH-TCE-EEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHc-CCc-eEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 34456666788999999987665432 2355777777774 885 655441 1 1 11 122344
Q ss_pred HHHcCCCeEEEecC---CCCHHhhhhhcCCCcHHHHHHHHHHHH----HcCCCCEEEEE
Q 022377 80 LKESGLTSVNISLD---TLVPAKFEFLTRRKGHEKVMESINAAI----EVGYNPVKVNC 131 (298)
Q Consensus 80 l~~~~~~~v~iSld---g~~~~~~~~ir~~~~~~~v~~~i~~l~----~~g~~~v~i~~ 131 (298)
....|...|.++.. |.+. ..........++.+.+.++.+. +.|+ .+.+..
T Consensus 97 a~~lG~~~v~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lEn 153 (290)
T 2qul_A 97 CHLLGAPVFAGLTFCAWPQSP-PLDMKDKRPYVDRAIESVRRVIKVAEDYGI-IYALEV 153 (290)
T ss_dssp HHHHTCSEEEEEEEEESSCCC-CTTCCCCHHHHHHHHHHHHTTHHHHHHHTC-EEEEEC
T ss_pred HHHcCCCEEEeeccccCCccc-CCCcccHHHHHHHHHHHHHHHHHHHHHcCC-EEEEEe
Confidence 45568887776542 3210 0000011122666666665544 3577 666654
No 125
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=62.99 E-value=25 Score=30.72 Aligned_cols=81 Identities=22% Similarity=0.310 Sum_probs=54.4
Q ss_pred CCCCCHHHHHHHHHHHHh-------CCCCEEEEcCCc---------cCcc-------------ccH-HHHHHHHhccC--
Q 022377 12 PQLLSLNEILRLAYLFVT-------SGVDKIRLTGGE---------PTVR-------------KDI-EEACFHLSKLK-- 59 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~-------~~~~~v~~tGGE---------Pll~-------------~~~-~~ii~~~~~~~-- 59 (298)
..+||.+||.++++.+.+ .|...|.+.++. |..+ ..| .++++.+++.-
T Consensus 145 p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~ 224 (363)
T 3l5l_A 145 PREMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPE 224 (363)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCT
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCC
Confidence 467999999999876544 588899998763 5432 224 48999988753
Q ss_pred CCCcEE--EEeC-----c-cchH---hhHHHHHHcCCCeEEEecC
Q 022377 60 GLKTLA--MTTN-----G-LTLA---RKLPKLKESGLTSVNISLD 93 (298)
Q Consensus 60 ~~~~v~--i~TN-----G-~ll~---~~~~~l~~~~~~~v~iSld 93 (298)
++. +. |..+ | .-.+ +.++.|.+.|++.|.+|--
T Consensus 225 d~p-V~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g 268 (363)
T 3l5l_A 225 NLP-LTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVG 268 (363)
T ss_dssp TSC-EEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred Cce-EEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 232 44 4332 3 2222 3467888899999999963
No 126
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=62.90 E-value=64 Score=26.67 Aligned_cols=127 Identities=13% Similarity=0.089 Sum_probs=75.3
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccc--------hHhhHHHHHHcCCCe
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLT--------LARKLPKLKESGLTS 87 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~l--------l~~~~~~l~~~~~~~ 87 (298)
+.+++.++++++.+.++..|+++ |.+.+.+. +.+ .++- +.+.+...+ ....++...+.|.+.
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~-------~~~v~~~~-~~~-~~li-v~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~ 108 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ-------RGIAEKYY-DGS-VPLI-LKLNGKTTLYNGEPVSVANCSVEEAVSLGASA 108 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC-------HHHHHHHC-CSS-SCEE-EECEECCTTCCSSCCCEESSCHHHHHHTTCSE
T ss_pred chhhHHHHHHHHHhhCCCEEEEC-------HHHHHHhh-cCC-CcEE-EEEeCCCCcCCCCccchHHHHHHHHHHCCCCE
Confidence 67889999999999999999877 55554444 333 2431 455444322 113478888889998
Q ss_pred EEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCC------CHhHHHHHHHHHhhCCCeeEEEe
Q 022377 88 VNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGF------NDDEICDFVELTRDRPINIRFIE 160 (298)
Q Consensus 88 v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~------n~~~i~~i~~~~~~~g~~~~~~~ 160 (298)
|++-++--+.. ++ ..++.+.+..+.+.++++ ++-+++ ..+|. +.+++....+.+.+.|.++--..
T Consensus 109 v~~~~nig~~~-~~-----~~~~~~~~v~~~~~~~~~-~vIi~~-~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~ 179 (263)
T 1w8s_A 109 VGYTIYPGSGF-EW-----KMFEELARIKRDAVKFDL-PLVVES-FPRGGKVVNETAPEIVAYAARIALELGADAMKIK 179 (263)
T ss_dssp EEEEECTTSTT-HH-----HHHHHHHHHHHHHHHHTC-CEEEEE-CCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EEEEEecCCcC-HH-----HHHHHHHHHHHHHHHcCC-eEEEEe-eCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 88876331111 00 012333334444456788 776663 22221 45667777788888898754333
No 127
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=62.69 E-value=84 Score=30.28 Aligned_cols=117 Identities=17% Similarity=0.221 Sum_probs=73.3
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc--CCccCcccc-HHHHHHHHhccC-CCCcEEEEeC---ccchHhhHHHHHHcCCC
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLT--GGEPTVRKD-IEEACFHLSKLK-GLKTLAMTTN---GLTLARKLPKLKESGLT 86 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~t--GGEPll~~~-~~~ii~~~~~~~-~~~~v~i~TN---G~ll~~~~~~l~~~~~~ 86 (298)
..+.+.+.++++++.+.|+..|+|. -| ++.|. +.++++.+++.. ++. +++.+. |.-+...+..+ ++|.+
T Consensus 257 ~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G--~~~P~~v~~lV~~lk~~~p~~~-I~~H~Hnd~GlAvANslaAv-eAGa~ 332 (718)
T 3bg3_A 257 KYSLQYYMGLAEELVRAGTHILCIKDMAG--LLKPTACTMLVSSLRDRFPDLP-LHIHTHDTSGAGVAAMLACA-QAGAD 332 (718)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEECTTS--CCCHHHHHHHHHHHHHHSTTCC-EEEECCCTTSCHHHHHHHHH-HTTCS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCcCC--CcCHHHHHHHHHHHHHhCCCCe-EEEEECCCccHHHHHHHHHH-HhCCC
Confidence 4578888888888888888888884 23 34454 457777776643 453 666643 43333344444 56888
Q ss_pred eEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhh
Q 022377 87 SVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 151 (298)
Q Consensus 87 ~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~ 151 (298)
.|..|+.|..+ ..|..+.+.++.+++. .|+ .. |.+.+.+.++.+++.+
T Consensus 333 ~VD~ti~GlGe-----rtGN~~lE~vv~~L~~---~g~-~t--------gidl~~L~~~s~~v~~ 380 (718)
T 3bg3_A 333 VVDVAADSMSG-----MTSQPSMGALVACTRG---TPL-DT--------EVPMERVFDYSEYWEG 380 (718)
T ss_dssp EEEEBCGGGCS-----TTSCCBHHHHHHHHTT---STT-CC--------CCCHHHHHHHHHHHHH
T ss_pred EEEecCccccc-----ccCchhHHHHHHHHHh---cCC-Cc--------ccCHHHHHHHHHHHHH
Confidence 88888888653 2344457777776664 355 31 4567776666666654
No 128
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=62.50 E-value=19 Score=30.34 Aligned_cols=58 Identities=17% Similarity=0.271 Sum_probs=42.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 73 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll 73 (298)
.++.+++.+.+.+..+.|-..+.+++|.|+++.-..++++.+.+. ++. +.+.-.-+.+
T Consensus 76 ~~~~~~~~~~i~~~~~~g~~Vv~L~~GDP~i~g~~~~l~~~l~~~-gi~-veviPGiSS~ 133 (285)
T 1cbf_A 76 GMHLEEMVGTMLDRMREGKMVVRVHTGDPAMYGAIMEQMVLLKRE-GVD-IEIVPGVTSV 133 (285)
T ss_dssp TCCHHHHHHHHHHHHTTTCCEEEEESBCTTTTCCCHHHHHHHHHT-TCE-EEEECCCCHH
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEEeCCCccccccHHHHHHHHHHC-CCc-EEEECCchHH
Confidence 467777766665555566677788899999998878888888874 885 8887665544
No 129
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=62.39 E-value=30 Score=29.75 Aligned_cols=76 Identities=20% Similarity=0.178 Sum_probs=49.8
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCc---------cC------c-----cccHHHHHHHHhccC--CCCcEEEEeCcc
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGE---------PT------V-----RKDIEEACFHLSKLK--GLKTLAMTTNGL 71 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGE---------Pl------l-----~~~~~~ii~~~~~~~--~~~~v~i~TNG~ 71 (298)
.++.+++..+.+.+.+.|+..|.++++- |+ + .+-..+.+..+++.. ++. + +.+.|.
T Consensus 221 ~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ip-V-i~~GGI 298 (336)
T 1f76_A 221 DLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLP-I-IGVGGI 298 (336)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSC-E-EEESSC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCC-E-EEECCC
Confidence 4778888889999999999999998641 00 1 111235666665532 453 3 445555
Q ss_pred chHhhHHHHHHcCCCeEEEe
Q 022377 72 TLARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 72 ll~~~~~~l~~~~~~~v~iS 91 (298)
...+.+.++...|.+.|++.
T Consensus 299 ~~~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 299 DSVIAAREKIAAGASLVQIY 318 (336)
T ss_dssp CSHHHHHHHHHHTCSEEEES
T ss_pred CCHHHHHHHHHCCCCEEEee
Confidence 44666766767899988886
No 130
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=62.25 E-value=61 Score=26.17 Aligned_cols=93 Identities=14% Similarity=0.127 Sum_probs=51.7
Q ss_pred cHHHHHHHHhccCCCCcEEEEeCcc---ch----HhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHH
Q 022377 47 DIEEACFHLSKLKGLKTLAMTTNGL---TL----ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAA 119 (298)
Q Consensus 47 ~~~~ii~~~~~~~~~~~v~i~TNG~---ll----~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l 119 (298)
++.+.++.+++. |+..+.+..... .. .+..+.+.+.|+....++.... ...+...+.++.+
T Consensus 31 ~~~~~l~~~~~~-G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~-----------~~~~~~~~~i~~A 98 (257)
T 3lmz_A 31 DLDTTLKTLERL-DIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM-----------KSEEEIDRAFDYA 98 (257)
T ss_dssp CHHHHHHHHHHT-TCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE-----------CSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh-CCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecccc-----------CCHHHHHHHHHHH
Confidence 566777777774 665455543310 01 1223445555665444432211 3456677777788
Q ss_pred HHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCeeE
Q 022377 120 IEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIR 157 (298)
Q Consensus 120 ~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~~~ 157 (298)
.+.|. +..+ +.++ .+.+.++.+.+.+.|+.+.
T Consensus 99 ~~lGa-~~v~---~~p~--~~~l~~l~~~a~~~gv~l~ 130 (257)
T 3lmz_A 99 KRVGV-KLIV---GVPN--YELLPYVDKKVKEYDFHYA 130 (257)
T ss_dssp HHHTC-SEEE---EEEC--GGGHHHHHHHHHHHTCEEE
T ss_pred HHhCC-CEEE---ecCC--HHHHHHHHHHHHHcCCEEE
Confidence 88887 4322 2342 4667778888877787643
No 131
>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus}
Probab=61.75 E-value=65 Score=26.31 Aligned_cols=91 Identities=12% Similarity=0.070 Sum_probs=54.5
Q ss_pred HHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhcc---CCCCcEEEEeCccchHhhHHHHHHcC-CCeEEEecCCCCH
Q 022377 22 RLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKL---KGLKTLAMTTNGLTLARKLPKLKESG-LTSVNISLDTLVP 97 (298)
Q Consensus 22 ~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~---~~~~~v~i~TNG~ll~~~~~~l~~~~-~~~v~iSldg~~~ 97 (298)
.+++.+ +.|-..+.+++|+|+++.-..++++.+.+. .++. +.+.-.-+...-....+--.- -+...+|+.+.
T Consensus 70 ~li~~~-~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~~~~~gi~-veviPGiSS~~aa~a~~G~plt~~~~~~s~~~~-- 145 (251)
T 3nut_A 70 HALEMA-AEGRRVVVVSSGDPGVFAMASALFEALEAHPEHAGTE-IRILPGITAMLAAAAAAGAPLGHDFCAINLSDN-- 145 (251)
T ss_dssp HHHHHH-HTTCEEEEEESBCTTSSSHHHHHHHHHHHCGGGTTCC-EEEECCCCHHHHHHHHHEETTSSSEEEEESCCT--
T ss_pred HHHHHH-HCCCeEEEEeCCCcccccCHHHHHHHHHhhcccCCCc-EEEECCHHHHHHHHHHhCCCccCCeEEEEecCC--
Confidence 345543 456566777899999999888888888761 3785 887665554433333332111 24455666431
Q ss_pred HhhhhhcCCCcHHHHHHHHHHHHHcCC
Q 022377 98 AKFEFLTRRKGHEKVMESINAAIEVGY 124 (298)
Q Consensus 98 ~~~~~ir~~~~~~~v~~~i~~l~~~g~ 124 (298)
...++...+.++.+...+.
T Consensus 146 --------~~~~~~~~~~l~~l~~~~~ 164 (251)
T 3nut_A 146 --------LKPFEILEKRLRHAARGDF 164 (251)
T ss_dssp --------TSCHHHHHHHHHHHHHTTC
T ss_pred --------CCChHHHHHHHHHHhCCCC
Confidence 1246666667777766654
No 132
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=61.62 E-value=78 Score=27.21 Aligned_cols=64 Identities=14% Similarity=0.320 Sum_probs=34.9
Q ss_pred HHHHhCCCCEEEEc---CCccCcccc-HHHH----HHHHhc-cCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEecC
Q 022377 25 YLFVTSGVDKIRLT---GGEPTVRKD-IEEA----CFHLSK-LKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLD 93 (298)
Q Consensus 25 ~~~~~~~~~~v~~t---GGEPll~~~-~~~i----i~~~~~-~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSld 93 (298)
+...+.|...|.+. ||.++|.|+ +.++ ++.+.+ ..+. ..+..-| .....++.+.+.|++.+ |+|
T Consensus 197 ~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~~~--~iih~~g-~~~~~l~~~~~~g~d~i--~~d 269 (348)
T 4ay7_A 197 NAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVNSV--TVLHICG-NVNPILSDMADCGFEGL--SVE 269 (348)
T ss_dssp HHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSSSE--EEEECCS-CCHHHHHHHHTSCCSEE--ECC
T ss_pred HHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhccCC--cEEEecC-CcHHHHHHHHHhccccc--ccc
Confidence 33344687777774 577788876 2232 222222 2222 2233333 23456788889999865 454
No 133
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=61.38 E-value=68 Score=26.41 Aligned_cols=100 Identities=14% Similarity=0.067 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcE-EEEe-------Cccch--------------Hh
Q 022377 18 NEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTL-AMTT-------NGLTL--------------AR 75 (298)
Q Consensus 18 e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v-~i~T-------NG~ll--------------~~ 75 (298)
..+...++.+.+.|...|.+.+..|. ..++.++.+.+.+. |+. + ++.+ ...+. .+
T Consensus 41 ~~~~~~l~~~~~~G~~~vEl~~~~~~-~~~~~~~~~~l~~~-gl~-~~~~~~~~p~~~~~~~l~~~d~~~r~~~~~~~~~ 117 (290)
T 2zvr_A 41 GDLRKGMELAKRVGYQAVEIAVRDPS-IVDWNEVKILSEEL-NLP-ICAIGTGQAYLADGLSLTHPNDEIRKKAIERVVK 117 (290)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECSCGG-GSCHHHHHHHHHHH-TCC-EEEEECTHHHHTTCCCTTCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhCCCEEEEcCCCcc-hhhHHHHHHHHHHc-CCe-EEEEeccCccccCCCCCCCCCHHHHHHHHHHHHH
Confidence 45667777788889999999876653 23466777777774 886 6 5655 11111 11
Q ss_pred hHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCC
Q 022377 76 KLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGY 124 (298)
Q Consensus 76 ~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~ 124 (298)
.++.....|...|..+..|..+ .......++.+.+.++.+.+..-
T Consensus 118 ~i~~A~~lG~~~v~~~~~g~~~----~~~~~~~~~~~~~~l~~l~~~a~ 162 (290)
T 2zvr_A 118 HTEVAGMFGALVIIGLVRGRRE----GRSYEETEELFIESMKRLLELTE 162 (290)
T ss_dssp HHHHHHHHTCEEEESGGGCCCT----TSCHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHcCCCEEEecCCCCCC----CcCHHHHHHHHHHHHHHHHHHhc
Confidence 2333444577766533223211 00011236778888888877644
No 134
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=61.27 E-value=42 Score=27.43 Aligned_cols=110 Identities=13% Similarity=0.077 Sum_probs=67.1
Q ss_pred HHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccC---------CCCcEEEEeCccchHhhHHHHHHcCCCeEEE-
Q 022377 21 LRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK---------GLKTLAMTTNGLTLARKLPKLKESGLTSVNI- 90 (298)
Q Consensus 21 ~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~---------~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~i- 90 (298)
.+.++.+.+.|...|+++.+-. .+..+.++.+++ . |+. +.+..|.....+.++.+.+ ++|.|.+
T Consensus 82 ~~~i~~~~~aGAd~itvH~ea~---~~~~~~i~~i~~-~~~~~~~~~~g~~-~gv~l~p~Tp~~~l~~~l~-~~D~vlvM 155 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQLEQY---HDFALTIEWLAK-QKTTYANQVYPVL-IGACLCPETPISELEPYLD-QIDVIQLL 155 (237)
T ss_dssp HHHHHHHHHTTCSEEEEETTCT---TSHHHHHHHHTT-CEEEETTEEEECE-EEEEECTTSCGGGGTTTTT-TCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEecCCc---ccHHHHHHHHHh-cccccccccCCce-EEEEEeCCChHHHHHHHhh-cCceeeee
Confidence 5568888889999999985432 346688888887 5 774 8888886444455555544 6887766
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc----CCCCEEEEEEEecCCCHhHHHHHH
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEV----GYNPVKVNCVVMRGFNDDEICDFV 146 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~----g~~~v~i~~vi~~~~n~~~i~~i~ 146 (298)
|++..-. +..--...++.|+.+++. |. .+ .+.+.-|.|.+.+.++.
T Consensus 156 sv~pgfg-------gq~f~~~~l~ki~~lr~~~~~~~~-~~--~I~vdGGI~~~~~~~~~ 205 (237)
T 3cu2_A 156 TLDPRNG-------TKYPSELILDRVIQVEKRLGNRRV-EK--LINIDGSMTLELAKYFK 205 (237)
T ss_dssp SEETTTT-------EECCHHHHHHHHHHHHHHHGGGGG-GC--EEEEESSCCHHHHHHHH
T ss_pred eeccCcC-------CeecChhHHHHHHHHHHHHHhcCC-Cc--eEEEECCcCHHHHHHHH
Confidence 6544211 111134455555555543 22 22 34455578877776654
No 135
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=61.10 E-value=32 Score=29.79 Aligned_cols=74 Identities=16% Similarity=0.214 Sum_probs=38.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCc--c--C-cccc-HHHHHHHHhccCCCCcEEEEeCccc-hHhhHHHHHHcC-CC
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTGGE--P--T-VRKD-IEEACFHLSKLKGLKTLAMTTNGLT-LARKLPKLKESG-LT 86 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tGGE--P--l-l~~~-~~~ii~~~~~~~~~~~v~i~TNG~l-l~~~~~~l~~~~-~~ 86 (298)
.+.++...+++.+.+.|+..|.++.|- | . ..+. ..++++.+++..++. +..||-. ..+.++++.+.| .|
T Consensus 226 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iP---Vi~~GgI~s~e~a~~~L~~G~aD 302 (340)
T 3gr7_A 226 LTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIP---TGAVGLITSGWQAEEILQNGRAD 302 (340)
T ss_dssp CCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCC---EEEESSCCCHHHHHHHHHTTSCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCc---EEeeCCCCCHHHHHHHHHCCCee
Confidence 456666677777777777777776321 1 0 0111 235555555533432 3344433 245566666665 66
Q ss_pred eEEEe
Q 022377 87 SVNIS 91 (298)
Q Consensus 87 ~v~iS 91 (298)
.|.+.
T Consensus 303 ~V~iG 307 (340)
T 3gr7_A 303 LVFLG 307 (340)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 66654
No 136
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=60.91 E-value=84 Score=27.36 Aligned_cols=115 Identities=12% Similarity=0.129 Sum_probs=74.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++..++++.+.++++ .|. ||+- + .+..+.+++..+ +-|.+++.+. .+.++++.+.+ .+.|++
T Consensus 198 ~~~~~~~a~~~~~~l~~~~i-~iE----~P~~--~-~~~~~~l~~~~~---iPI~~de~i~~~~~~~~~i~~~~~d~v~i 266 (379)
T 2rdx_A 198 QGWRVDNAIRLARATRDLDY-ILE----QPCR--S-YEECQQVRRVAD---QPMKLDECVTGLHMAQRIVADRGAEICCL 266 (379)
T ss_dssp TCSCHHHHHHHHHHTTTSCC-EEE----CCSS--S-HHHHHHHHTTCC---SCEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCCCHHHHHHHHHHHHhCCe-EEe----CCcC--C-HHHHHHHHhhCC---CCEEEeCCcCCHHHHHHHHHcCCCCEEEE
Confidence 45688999899998888887 653 6874 4 344455555334 4467788765 35666665544 788887
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCC
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRP 153 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g 153 (298)
.+.- .+++...++.++.+.++|+ ++.+.+.. .+.-.+...+.++...+
T Consensus 267 k~~~-----------~GGit~~~~i~~~A~~~g~-~~~~~~~~---es~i~~~a~~~laaa~~ 314 (379)
T 2rdx_A 267 KISN-----------LGGLSKARRTRDFLIDNRM-PVVAEDSW---GGEIASAAVAHFAASTP 314 (379)
T ss_dssp ETTT-----------TTSHHHHHHHHHHHHHTTC-CEEEECSB---CSHHHHHHHHHHHHTSC
T ss_pred eccc-----------cCCHHHHHHHHHHHHHcCC-eEEEeecc---CcHHHHHHHHHHHHcCC
Confidence 6532 3568899999999999999 77665321 23333445555655443
No 137
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=60.79 E-value=72 Score=26.55 Aligned_cols=122 Identities=12% Similarity=0.110 Sum_probs=63.1
Q ss_pred HHHHHhCCCCEEEEcCCccCcc--ccHHHHHHHHhccCCCCcEEEEeC----ccch--------------HhhHHHHHHc
Q 022377 24 AYLFVTSGVDKIRLTGGEPTVR--KDIEEACFHLSKLKGLKTLAMTTN----GLTL--------------ARKLPKLKES 83 (298)
Q Consensus 24 i~~~~~~~~~~v~~tGGEPll~--~~~~~ii~~~~~~~~~~~v~i~TN----G~ll--------------~~~~~~l~~~ 83 (298)
++.+.+.|...|-+....|... .++.++.+.+.+ .|+. +...+. ..+. .+.++.....
T Consensus 42 l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~-~gl~-i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~l 119 (309)
T 2hk0_A 42 IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKD-NGII-LTAGIGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKL 119 (309)
T ss_dssp HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHH-TTCE-EEEECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHH-cCCe-EEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 5666778999999886544322 335577777777 4885 665432 1111 1224444556
Q ss_pred CCCeEEEecC---CCCHHhhhhh-cCCCcHHHHHHHHHHHH----HcCCCCEEEEEEEe-cC---CCHhHHHHHHHHHhh
Q 022377 84 GLTSVNISLD---TLVPAKFEFL-TRRKGHEKVMESINAAI----EVGYNPVKVNCVVM-RG---FNDDEICDFVELTRD 151 (298)
Q Consensus 84 ~~~~v~iSld---g~~~~~~~~i-r~~~~~~~v~~~i~~l~----~~g~~~v~i~~vi~-~~---~n~~~i~~i~~~~~~ 151 (298)
|...|.+... |... ... .....++.+.+.++.+. +.|+ .+.+...-. ++ .+.+++.++++-+..
T Consensus 120 G~~~v~~~~~~~~g~~~---~~~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lEn~~~~~~~~~~~~~~~~~l~~~v~~ 195 (309)
T 2hk0_A 120 DIHTIGGALHSYWPIDY---SQPVDKAGDYARGVEGINGIADFANDLGI-NLCIEVLNRFENHVLNTAAEGVAFVKDVGK 195 (309)
T ss_dssp TCCEEEECTTSCSSCCT---TSCCCHHHHHHHHHHHHHHHHHHHHHTTC-EEEEECCCTTTCSSCCSHHHHHHHHHHHTC
T ss_pred CCCEEEeeccccccccC---CCcCChHHHHHHHHHHHHHHHHHHHHcCC-EEEEeecccccccccCCHHHHHHHHHHcCC
Confidence 8888876542 2100 000 00112566666666554 3577 666654310 11 134555555555543
No 138
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=60.62 E-value=79 Score=26.98 Aligned_cols=60 Identities=7% Similarity=0.094 Sum_probs=38.4
Q ss_pred HHHhCCCCEEEEc---CCccCcccc---------HHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEE
Q 022377 26 LFVTSGVDKIRLT---GGEPTVRKD---------IEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNI 90 (298)
Q Consensus 26 ~~~~~~~~~v~~t---GGEPll~~~---------~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~i 90 (298)
...+.|+..|.+. || +|.|+ +.++++.+++..+.. +.+.+.|. ...++.+.+.|++.+++
T Consensus 187 ~~~~aGad~i~i~d~~~~--~lsp~~f~ef~~p~~k~i~~~i~~~~g~~-~i~~~~g~--~~~l~~l~~~g~d~~~~ 258 (338)
T 2eja_A 187 EQIKAGADVVQIFDSWVN--NLSLEDYGEYVYPYVNYLISELKDFSDTP-VIYFFRGS--SSFIDLAVDYRADALSV 258 (338)
T ss_dssp HHHHTTCSEEEEEETTGG--GSCHHHHHHHTHHHHHHHHHHHHHHCCCC-EEEEESSH--HHHHHHHTTSCCSEEEC
T ss_pred HHHHhCCCEEEEecCccc--cCCHHHHHHHhHHHHHHHHHHHhhcCCCC-EEEEcCCc--HHHHHHHHHcCCCEEEe
Confidence 3334677766653 34 67765 335666666532664 66777786 56788888999996544
No 139
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=59.71 E-value=29 Score=28.10 Aligned_cols=58 Identities=19% Similarity=0.225 Sum_probs=42.1
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 73 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll 73 (298)
..+.+++.+.+.+..+.|-..+.+.+|.|+++.-..++++.+.+. ++. +.+.-.-+.+
T Consensus 61 ~~~~~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~-gi~-v~viPGiSs~ 118 (235)
T 1ve2_A 61 KTPQEAITARLIALAREGRVVARLKGGDPMVFGRGGEEALALRRA-GIP-FEVVPGVTSA 118 (235)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEESBCTTSSTTHHHHHHHHHHH-TCC-EEEECCCCTT
T ss_pred ccCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCHHHHHHHHHHC-CCC-EEEECCHhHH
Confidence 456777776655555556455666899999998888888888874 885 8887665544
No 140
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=59.33 E-value=57 Score=28.18 Aligned_cols=97 Identities=18% Similarity=0.170 Sum_probs=64.3
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++..++++.+.++++..+- ||+-..+ .+..+.+++..+ +-|.+++.+. .+.++++.+.+ .+.|++
T Consensus 198 ~~~~~~~a~~~~~~l~~~~i~~iE----~P~~~~~-~~~~~~l~~~~~---iPI~~de~~~~~~~~~~~i~~~~~d~v~i 269 (359)
T 1mdl_A 198 QSLDVPAAIKRSQALQQEGVTWIE----EPTLQHD-YEGHQRIQSKLN---VPVQMGENWLGPEEMFKALSIGACRLAMP 269 (359)
T ss_dssp TCSCHHHHHHHHHHHHHHTCSCEE----CCSCTTC-HHHHHHHHHTCS---SCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCCCHHHHHHHHHHHHHhCCCeEE----CCCChhh-HHHHHHHHHhCC---CCEEeCCCCCCHHHHHHHHHcCCCCEEee
Confidence 446788888888888888877663 6874333 344455555334 4466788766 45667766654 665555
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
.+. ..+++...++.++.+.++|+ ++.+
T Consensus 270 k~~-----------~~GGi~~~~~i~~~A~~~g~-~~~~ 296 (359)
T 1mdl_A 270 DAM-----------KIGGVTGWIRASALAQQFGI-PMSS 296 (359)
T ss_dssp BTT-----------TTTHHHHHHHHHHHHHHTTC-CBCC
T ss_pred cch-----------hhCCHHHHHHHHHHHHHcCC-eEee
Confidence 432 23568899999999999999 6533
No 141
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=59.21 E-value=41 Score=27.84 Aligned_cols=127 Identities=14% Similarity=0.042 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCccCccc-----------cHHHHHHHHhccCCCCcEEEEeCccc-h--HhhHHH-HH
Q 022377 17 LNEILRLAYLFVTSGVDKIRLTGGEPTVRK-----------DIEEACFHLSKLKGLKTLAMTTNGLT-L--ARKLPK-LK 81 (298)
Q Consensus 17 ~e~~~~~i~~~~~~~~~~v~~tGGEPll~~-----------~~~~ii~~~~~~~~~~~v~i~TNG~l-l--~~~~~~-l~ 81 (298)
.+.+.+.++.+..+|+..|.+.|+.+...+ .+.++++.+.+ .|+. +.+.+-... + .+.+.. +.
T Consensus 107 ~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~-l~lEn~~~~~~~~~~~~~~l~~ 184 (295)
T 3cqj_A 107 LEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASR-AQVT-LAMEIMDYPLMNSISKALGYAH 184 (295)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHH-HTCE-EEEECCSSGGGCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHH-hCCE-EEEeeCCCcccCCHHHHHHHHH
Confidence 466788888888899999998877542211 13455566666 4885 888876542 2 233333 34
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEE------ec-CCCHhHHHHHHHHHhhCCC
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV------MR-GFNDDEICDFVELTRDRPI 154 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi------~~-~~n~~~i~~i~~~~~~~g~ 154 (298)
..+-..+.+-+|... -...+ .+. .+.++.+.+. +..+.+.-.. .+ |.-.-++.++++.+.+.|.
T Consensus 185 ~v~~~~vg~~~D~~h----~~~~g-~d~---~~~l~~~~~~-i~~vHl~D~~~g~~~~~p~G~G~id~~~~~~~L~~~gy 255 (295)
T 3cqj_A 185 YLNNPWFQLYPDIGN----LSAWD-NDV---QMELQAGIGH-IVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLKQSGY 255 (295)
T ss_dssp HHCCTTEEEECBHHH----HHSSS-CCH---HHHHHHTGGG-BCCEEECEEETTEEEEECTTSSSCCHHHHHHHHHHTTC
T ss_pred hcCCCCeEEEeccch----HhhcC-CCH---HHHHHHhccc-eEEEEeecCCCCccCCcCCCCCccCHHHHHHHHHHCCC
Confidence 445567899888742 12223 233 2344444332 2244443221 11 3223346677777777665
No 142
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=59.18 E-value=18 Score=29.76 Aligned_cols=78 Identities=13% Similarity=0.131 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCccCcc----------ccHHHHHHHHhccCCCCcEEEEe-C-----ccch--Hh-h
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLTGGEPTVR----------KDIEEACFHLSKLKGLKTLAMTT-N-----GLTL--AR-K 76 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~tGGEPll~----------~~~~~ii~~~~~~~~~~~v~i~T-N-----G~ll--~~-~ 76 (298)
..+.+.+.++.+..+|...|.+..|-|.-. ..+.++++++.+ .|+. +.+.+ | +.++ .+ .
T Consensus 91 ~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~-l~lE~~n~~~~~~~~~~~~~~~ 168 (269)
T 3ngf_A 91 FRDNVDIALHYALALDCRTLHAMSGITEGLDRKACEETFIENFRYAADKLAP-HGIT-VLVEPLNTRNMPGYFIVHQLEA 168 (269)
T ss_dssp HHHHHHHHHHHHHHTTCCEEECCBCBCTTSCHHHHHHHHHHHHHHHHHHHGG-GTCE-EEECCCCTTTSTTBSCCCHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHHHH-cCCE-EEEeeCCcccCccchhcCHHHH
Confidence 456788889999999999999865544311 113356666666 4885 88886 4 3333 23 3
Q ss_pred HHHHHHcCCCeEEEecCCC
Q 022377 77 LPKLKESGLTSVNISLDTL 95 (298)
Q Consensus 77 ~~~l~~~~~~~v~iSldg~ 95 (298)
.+.+...+-..+.+-+|..
T Consensus 169 ~~l~~~v~~~~vg~~~D~~ 187 (269)
T 3ngf_A 169 VGLVKRVNRPNVAVQLDLY 187 (269)
T ss_dssp HHHHHHHCCTTEEEEEEHH
T ss_pred HHHHHHhCCCCCCeEEEhh
Confidence 3444444556688888864
No 143
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=59.05 E-value=24 Score=26.43 Aligned_cols=67 Identities=7% Similarity=0.094 Sum_probs=44.5
Q ss_pred CCeEEEecCCCCHHhhh--hhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCeeEEE
Q 022377 85 LTSVNISLDTLVPAKFE--FLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFI 159 (298)
Q Consensus 85 ~~~v~iSldg~~~~~~~--~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~~~~~ 159 (298)
+..|.+.+||.=-. ++ .+.. ....++++|+.+++.|+ .+ ++..|.+...+..+.+++.++|+.+..+
T Consensus 3 ~k~i~~DlDGTL~~-~~~~~i~~--~~~~~~~al~~l~~~G~-~i----ii~TgR~~~~~~~~~~~l~~~gi~~~~I 71 (142)
T 2obb_A 3 AMTIAVDFDGTIVE-HRYPRIGE--EIPFAVETLKLLQQEKH-RL----ILWSVREGELLDEAIEWCRARGLEFYAA 71 (142)
T ss_dssp CCEEEECCBTTTBC-SCTTSCCC--BCTTHHHHHHHHHHTTC-EE----EECCSCCHHHHHHHHHHHHTTTCCCSEE
T ss_pred CeEEEEECcCCCCC-CCCccccc--cCHHHHHHHHHHHHCCC-EE----EEEeCCCcccHHHHHHHHHHcCCCeEEE
Confidence 45688899994211 11 1111 12478999999999998 44 4444566778889999999998865433
No 144
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A
Probab=58.96 E-value=26 Score=28.41 Aligned_cols=58 Identities=24% Similarity=0.267 Sum_probs=41.6
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 73 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll 73 (298)
..+.+++.+.+.+..+.|-..+.+.+|.|+++.-..++++.+.+. ++. +.+.-.-+.+
T Consensus 58 ~~~~~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~-gi~-v~viPGiSs~ 115 (239)
T 1va0_A 58 SEKQEEIHRLLLRHARAHPFVVRLKGGDPMVFGRGGEEVLFLLRH-GVP-VEVVPGVTSL 115 (239)
T ss_dssp --CHHHHHHHHHHHHHTSSEEEEEESBCTTSSSSHHHHHHHHHHT-TCC-EEEECCCCGG
T ss_pred ccCHHHHHHHHHHHHHCCCcEEEEeCCCCccccCHHHHHHHHHHC-CCc-EEEECCcchH
Confidence 556777776665555566456666899999998888899988884 885 8887665544
No 145
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=58.57 E-value=23 Score=30.96 Aligned_cols=74 Identities=18% Similarity=0.166 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCc--cC----cccc-HHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-C
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTGGE--PT----VRKD-IEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-L 85 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tGGE--Pl----l~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~ 85 (298)
.+.++...+++.+.+.|+..|.+++|- +- ..+. ..++++.+++..++. +..||-.. .+.++++.+.| .
T Consensus 243 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iP---Vi~~GgI~s~e~a~~~l~~G~a 319 (363)
T 3l5l_A 243 QTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLP---VTSAWGFGTPQLAEAALQANQL 319 (363)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCC---EEECSSTTSHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCc---EEEeCCCCCHHHHHHHHHCCCc
Confidence 567888888888888898888888542 11 0121 345666666543443 44566544 56777777777 7
Q ss_pred CeEEEe
Q 022377 86 TSVNIS 91 (298)
Q Consensus 86 ~~v~iS 91 (298)
|.|.+.
T Consensus 320 D~V~iG 325 (363)
T 3l5l_A 320 DLVSVG 325 (363)
T ss_dssp SEEECC
T ss_pred cEEEec
Confidence 777664
No 146
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=57.67 E-value=99 Score=28.66 Aligned_cols=115 Identities=15% Similarity=0.260 Sum_probs=65.7
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEc--CCccCcccc-HHHHHHHHhccC--CCCcEEEEe---CccchHhhHHHHHHcCCCe
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLT--GGEPTVRKD-IEEACFHLSKLK--GLKTLAMTT---NGLTLARKLPKLKESGLTS 87 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~t--GGEPll~~~-~~~ii~~~~~~~--~~~~v~i~T---NG~ll~~~~~~l~~~~~~~ 87 (298)
+++.+.++++++.+.|+..|+|. -| ++.|. +.++++.+++.. ++. +++.+ -|.-+...+.. .++|.+.
T Consensus 173 ~~e~~~~~a~~l~~~Gad~I~L~DT~G--~~~P~~v~~lv~~l~~~~p~~i~-I~~H~Hnd~GlAvAN~laA-veAGa~~ 248 (539)
T 1rqb_A 173 TVEGYVKLAGQLLDMGADSIALKDMAA--LLKPQPAYDIIKAIKDTYGQKTQ-INLHCHSTTGVTEVSLMKA-IEAGVDV 248 (539)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTC--CCCHHHHHHHHHHHHHHHCTTCC-EEEEEBCTTSCHHHHHHHH-HHTTCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCC--CcCHHHHHHHHHHHHHhcCCCce-EEEEeCCCCChHHHHHHHH-HHhCCCE
Confidence 67777777777777777777773 12 13343 446666555532 453 66553 34333333333 3568888
Q ss_pred EEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhh
Q 022377 88 VNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 151 (298)
Q Consensus 88 v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~ 151 (298)
|..|+.|..+ ..|..+.+.++.+++. .|+ . + |.+.+.+.++.+++.+
T Consensus 249 VD~ti~g~Ge-----rtGN~~lE~lv~~L~~---~g~-~----t----gidl~~L~~is~~v~~ 295 (539)
T 1rqb_A 249 VDTAISSMSL-----GPGHNPTESVAEMLEG---TGY-T----T----NLDYDRLHKIRDHFKA 295 (539)
T ss_dssp EEEBCGGGCS-----TTSBCBHHHHHHHTTT---SSE-E----C----CCCHHHHHHHHHHHHH
T ss_pred EEEeccccCC-----CccChhHHHHHHHHHh---cCC-C----c----hhhHHHHHHHHHHHHH
Confidence 8888877542 1344446666666553 233 1 1 4677777777766654
No 147
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=57.65 E-value=57 Score=28.27 Aligned_cols=75 Identities=19% Similarity=0.246 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCccC------------c-cccHH-HHHHHHhccCCCCcEEEEeC-ccc-------h
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLTGGEPT------------V-RKDIE-EACFHLSKLKGLKTLAMTTN-GLT-------L 73 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~tGGEPl------------l-~~~~~-~ii~~~~~~~~~~~v~i~TN-G~l-------l 73 (298)
+++.+.+..+.+.+.|...|.+.+|-|. + ++++. ++++.+++.-++. +.+-+. |.. .
T Consensus 68 ~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~P-V~vKiR~g~~~~~~~~~~ 146 (350)
T 3b0p_A 68 DPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVP-VTVKMRLGLEGKETYRGL 146 (350)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSC-EEEEEESCBTTCCCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCc-eEEEEecCcCccccHHHH
Confidence 4688888888888899999999876664 2 34544 8888888744664 666322 221 2
Q ss_pred HhhHHHHHHcCCCeEEEe
Q 022377 74 ARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 74 ~~~~~~l~~~~~~~v~iS 91 (298)
.+.++.+.++|++.|.|+
T Consensus 147 ~~~a~~l~~aG~d~I~V~ 164 (350)
T 3b0p_A 147 AQSVEAMAEAGVKVFVVH 164 (350)
T ss_dssp HHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHcCCCEEEEe
Confidence 345788889999999987
No 148
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=57.57 E-value=74 Score=25.64 Aligned_cols=99 Identities=9% Similarity=0.111 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHhCCCCEEEE--cCCc--cCccccHHHHHHHHhccCCCC-cEEEEeCccchHhhHHHHHHcCCCeEEEe
Q 022377 17 LNEILRLAYLFVTSGVDKIRL--TGGE--PTVRKDIEEACFHLSKLKGLK-TLAMTTNGLTLARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 17 ~e~~~~~i~~~~~~~~~~v~~--tGGE--Pll~~~~~~ii~~~~~~~~~~-~v~i~TNG~ll~~~~~~l~~~~~~~v~iS 91 (298)
...+.+.++.+.+.|+..+.+ --|. |-+...+ ++++.+++..+.. .+.+-+|= -.+.++.+.++|.+.|.|.
T Consensus 16 ~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~-~~v~~lr~~~~~~~~vhlmv~d--p~~~i~~~~~aGadgv~vh 92 (230)
T 1tqj_A 16 FSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGP-LIVDAIRPLTKKTLDVHLMIVE--PEKYVEDFAKAGADIISVH 92 (230)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCH-HHHHHHGGGCCSEEEEEEESSS--GGGTHHHHHHHTCSEEEEE
T ss_pred HhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhH-HHHHHHHhhcCCcEEEEEEccC--HHHHHHHHHHcCCCEEEEC
Confidence 455666777777788776544 4565 5444433 7888887753332 23344432 2457899999999999998
Q ss_pred cC--CCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEec
Q 022377 92 LD--TLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMR 135 (298)
Q Consensus 92 ld--g~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~ 135 (298)
.. ..+ ...+.++.+++.|. .+.+.+ .+
T Consensus 93 ~e~~~~~--------------~~~~~~~~i~~~g~-~~gv~~--~p 121 (230)
T 1tqj_A 93 VEHNASP--------------HLHRTLCQIRELGK-KAGAVL--NP 121 (230)
T ss_dssp CSTTTCT--------------THHHHHHHHHHTTC-EEEEEE--CT
T ss_pred cccccch--------------hHHHHHHHHHHcCC-cEEEEE--eC
Confidence 66 321 23356677778888 665544 55
No 149
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=57.28 E-value=28 Score=30.31 Aligned_cols=81 Identities=19% Similarity=0.308 Sum_probs=51.8
Q ss_pred CCCCCHHHHHHHHHHHHh-------CCCCEEEEcCC---------ccC-------------ccccHH-HHHHHHhccC--
Q 022377 12 PQLLSLNEILRLAYLFVT-------SGVDKIRLTGG---------EPT-------------VRKDIE-EACFHLSKLK-- 59 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~-------~~~~~v~~tGG---------EPl-------------l~~~~~-~ii~~~~~~~-- 59 (298)
..+||.+||.++++++.+ .|...|.+.|+ -|. -+..|. ++++.+++.-
T Consensus 130 p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~ 209 (343)
T 3kru_A 130 PRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPE 209 (343)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCT
T ss_pred chhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCc
Confidence 468999999999876544 57888888732 233 244454 8999988753
Q ss_pred CCC-cEEEEeC-----ccchH---hhHHHHHHcCCCeEEEecC
Q 022377 60 GLK-TLAMTTN-----GLTLA---RKLPKLKESGLTSVNISLD 93 (298)
Q Consensus 60 ~~~-~v~i~TN-----G~ll~---~~~~~l~~~~~~~v~iSld 93 (298)
++. -+.|..+ |.-.+ +.++.|.++ ++.|.+|.-
T Consensus 210 d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g 251 (343)
T 3kru_A 210 NKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSG 251 (343)
T ss_dssp TSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECC
T ss_pred cCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCC
Confidence 332 1334443 22233 346677777 999999843
No 150
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=57.24 E-value=27 Score=30.81 Aligned_cols=83 Identities=14% Similarity=0.189 Sum_probs=53.2
Q ss_pred CCCCCCHHHHHHHHHHHH-------hCCCCEEEEcCCc---------cCcc-------------ccH-HHHHHHHhccCC
Q 022377 11 KPQLLSLNEILRLAYLFV-------TSGVDKIRLTGGE---------PTVR-------------KDI-EEACFHLSKLKG 60 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~-------~~~~~~v~~tGGE---------Pll~-------------~~~-~~ii~~~~~~~~ 60 (298)
...+||.+||..+++.+. +.|...|.+.+|- |..+ ..+ .++++.+++.-+
T Consensus 152 ~p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg 231 (377)
T 2r14_A 152 TPRALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFG 231 (377)
T ss_dssp CCEECCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcC
Confidence 356799999998887654 3588899998765 5532 223 488888877423
Q ss_pred CCcEEEEeCc----------cchH---hhHHHHHHcCCCeEEEecC
Q 022377 61 LKTLAMTTNG----------LTLA---RKLPKLKESGLTSVNISLD 93 (298)
Q Consensus 61 ~~~v~i~TNG----------~ll~---~~~~~l~~~~~~~v~iSld 93 (298)
-..+.+--+. .-.+ +.++.|.+.|++.|.+|--
T Consensus 232 ~~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~ 277 (377)
T 2r14_A 232 PERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEP 277 (377)
T ss_dssp GGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 1024443322 1122 3467888899999999863
No 151
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=57.07 E-value=1e+02 Score=27.00 Aligned_cols=98 Identities=10% Similarity=0.124 Sum_probs=68.5
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++.. ++.+++..+ +-|.++..+. .+.++.+.+.+ ++.|+
T Consensus 202 n~~~~~~~A~~~~~~l~~~~i~~iE----qP~~~~d~~~-~~~l~~~~~---iPIa~dE~~~~~~~~~~~i~~~~~d~v~ 273 (383)
T 3i4k_A 202 NARWDRRTALHYLPILAEAGVELFE----QPTPADDLET-LREITRRTN---VSVMADESVWTPAEALAVVKAQAADVIA 273 (383)
T ss_dssp TTCSCHHHHHHHHHHHHHTTCCEEE----SCSCTTCHHH-HHHHHHHHC---CEEEESTTCSSHHHHHHHHHHTCCSEEE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE----CCCChhhHHH-HHHHHhhCC---CCEEecCccCCHHHHHHHHHcCCCCEEE
Confidence 4557889999999999999987776 8986555443 334444224 4466777766 34566666554 78777
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
+.+.- .+++...++....+.++|+ ++.+
T Consensus 274 ~k~~~-----------~GGit~~~~ia~~A~~~gi-~~~~ 301 (383)
T 3i4k_A 274 LKTTK-----------HGGLLESKKIAAIAEAGGL-ACHG 301 (383)
T ss_dssp ECTTT-----------TTSHHHHHHHHHHHHHTTC-EEEE
T ss_pred Ecccc-----------cCCHHHHHHHHHHHHHcCC-eEEe
Confidence 76532 3568899999999999999 6533
No 152
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=56.90 E-value=79 Score=25.77 Aligned_cols=125 Identities=18% Similarity=0.153 Sum_probs=76.3
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHH-HHhccC-CCCcEEEEeCcc----chH----hhHHHHH
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACF-HLSKLK-GLKTLAMTTNGL----TLA----RKLPKLK 81 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~-~~~~~~-~~~~v~i~TNG~----ll~----~~~~~l~ 81 (298)
+...+.+++.++++++.++++..|++ +|.+. .+. .+.. . +++ +.-.+ |+ ... ..++...
T Consensus 30 ~p~~t~~~i~~l~~~a~~~~~~aVcv-------~p~~v-~a~~~l~~-~~~v~-v~tvi-gFP~G~~~~~~k~~e~~~Av 98 (234)
T 1n7k_A 30 SPRATEEDVRNLVREASDYGFRCAVL-------TPVYT-VKISGLAE-KLGVK-LCSVI-GFPLGQAPLEVKLVEAQTVL 98 (234)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCSEEEE-------CHHHH-HHHHHHHH-HHTCC-EEEEE-STTTCCSCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEE-------chHHh-eeehHhCC-CCCce-EEEEe-CCCCCCCcHHHHHHHHHHHH
Confidence 45679999999999999999888885 45555 333 3322 3 564 76666 33 222 2356666
Q ss_pred HcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCee
Q 022377 82 ESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 82 ~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~~ 156 (298)
+.|.+.|.+-++--. ..+ .-++.+.+-.+.+.++|. ++++-.-... .+.+++....+.+.+.|.++
T Consensus 99 ~~GAdEID~vinig~--~~~-----~v~~ei~~v~~a~~~~g~-~lKvIlEt~~-L~~e~i~~a~ria~eaGADf 164 (234)
T 1n7k_A 99 EAGATELDVVPHLSL--GPE-----AVYREVSGIVKLAKSYGA-VVKVILEAPL-WDDKTLSLLVDSSRRAGADI 164 (234)
T ss_dssp HHTCCEEEECCCGGG--CHH-----HHHHHHHHHHHHHHHTTC-EEEEECCGGG-SCHHHHHHHHHHHHHTTCSE
T ss_pred HcCCCEEEEeccchH--HHH-----HHHHHHHHHHHHHhhcCC-eEEEEEeccC-CCHHHHHHHHHHHHHhCCCE
Confidence 779998888876421 111 112222222333334566 6644332222 46788999999999999874
No 153
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=56.88 E-value=96 Score=26.75 Aligned_cols=60 Identities=17% Similarity=0.216 Sum_probs=39.6
Q ss_pred HHHHhCCCCEEEEc---CCccCcccc---------HHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEE
Q 022377 25 YLFVTSGVDKIRLT---GGEPTVRKD---------IEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNI 90 (298)
Q Consensus 25 ~~~~~~~~~~v~~t---GGEPll~~~---------~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~i 90 (298)
+...+.|+..|.+. || ++.|+ +.++++.+++. +.. +.+.+.|. ...++.+.+.|++.+++
T Consensus 200 ~~~~~aGad~i~i~D~~~~--~lsp~~f~ef~~p~~~~i~~~i~~~-g~~-~i~~~~G~--~~~l~~l~~~g~d~~~~ 271 (359)
T 2inf_A 200 KAQIKAGAKAIQIFDSWVG--ALNQADYRTYIKPVMNRIFSELAKE-NVP-LIMFGVGA--SHLAGDWHDLPLDVVGL 271 (359)
T ss_dssp HHHHHTTCSEEEEECTTGG--GSCHHHHHHHTHHHHHHHHHHHGGG-CSC-EEEECTTC--GGGHHHHHTSSCSEEEC
T ss_pred HHHHHhCCCEEEEeCCccc--cCCHHHHHHHhHHHHHHHHHHHHHc-CCc-EEEEcCCc--HHHHHHHHHhCCCEEEe
Confidence 33445688777763 34 67664 33566777764 664 66777776 55788888999996544
No 154
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=56.85 E-value=68 Score=28.20 Aligned_cols=100 Identities=15% Similarity=0.172 Sum_probs=67.5
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..+- ||+-..++ +-.+.+++..+ +-|.+.+.+. .+.++++.+.+ .+.|+
T Consensus 197 n~~~~~~~a~~~~~~l~~~~i~~iE----qP~~~~~~-~~~~~l~~~~~---iPIa~dE~~~~~~~~~~~i~~~~~d~v~ 268 (397)
T 2qde_A 197 NGAWTYDQALTTIRALEKYNLSKIE----QPLPAWDL-DGMARLRGKVA---TPIYADESAQELHDLLAIINKGAADGLM 268 (397)
T ss_dssp TTCCCHHHHHHHHHHHGGGCCSCEE----CCSCTTCH-HHHHHHHTTCS---SCEEESTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CCCCCHHHHHHHHHHHHhCCCCEEE----CCCChhhH-HHHHHHHhhCC---CCEEEeCCcCCHHHHHHHHHcCCCCEEE
Confidence 3457889998999999888877664 78744343 44445554334 4466777665 34566666544 77777
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNC 131 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~ 131 (298)
+.+. ..+++..+++.++.+.++|+ ++.+.+
T Consensus 269 ik~~-----------~~GGit~~~~i~~~A~~~g~-~~~~~~ 298 (397)
T 2qde_A 269 IKTQ-----------KAGGLLKAQRWLTLARLANL-PVICGC 298 (397)
T ss_dssp ECHH-----------HHTSHHHHHHHHHHHHHHTC-CEEECC
T ss_pred Eecc-----------ccCCHHHHHHHHHHHHHcCC-eEEEec
Confidence 6532 13568899999999999999 765553
No 155
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=56.54 E-value=36 Score=28.72 Aligned_cols=134 Identities=13% Similarity=0.131 Sum_probs=85.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEE--cCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-------------HhhHHH
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRL--TGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-------------ARKLPK 79 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~--tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-------------~~~~~~ 79 (298)
-+.+++.+++....+.| ..|.| |.| -||..-..+++.+++..+..-++|--|.+.+ ++.++.
T Consensus 8 ~t~~elr~~~~~~r~~g-~~IgfVPTMG--~LH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~~ 84 (287)
T 3q12_A 8 ETLPLLRQQIRRWRQEG-KRIALVPTMG--NLHEGHMTLVDEAKTRADVVVVTIFVNPLQFERPDDLAHYPRTLQEDCEK 84 (287)
T ss_dssp CSHHHHHHHHHHHHHTT-CCEEEEEECS--SCCHHHHHHHHHHHTTSSEEEEEECCCGGGCSSHHHHHHSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcC-CeEEEEcCCC--cccHHHHHHHHHHHHhCCEEEEEeccCcccCCCcchhhcCCCCHHHHHHH
Confidence 46889999999888877 56777 877 3999999999999886454335677788764 234677
Q ss_pred HHHcCCCeEEEecCCCCHHhhh----------------hh---cCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHh
Q 022377 80 LKESGLTSVNISLDTLVPAKFE----------------FL---TRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDD 140 (298)
Q Consensus 80 l~~~~~~~v~iSldg~~~~~~~----------------~i---r~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~ 140 (298)
+.++|+|.| +.-+. ++.|- .+ .+.+.|+-+..-+.+|...=-+.. ..+.. ....
T Consensus 85 l~~~gvd~v-F~P~~--~emYP~g~~~~t~v~~~~l~~~LeG~~RPgHF~GV~TVV~KLfniv~Pd~---A~FGe-KD~Q 157 (287)
T 3q12_A 85 LTRHGADLV-FAPAA--ADIYPAGLEKQTYVDVPALSTILEGASRPGHFRGVSTIVSKLFNLIQPDV---ACFGE-KDYQ 157 (287)
T ss_dssp HHHHTCSEE-ECCCH--HHHSTTCSTTCCEEECTTTSSSTHHHHSTTHHHHHHHHHHHHHHHHCCSE---EEEET-TSHH
T ss_pred HHHCCCCEE-ECCCh--HhcCCCCCCceeEEecCCccccccCCCCcchhhhHHHHHHHHHhccCCCe---eEEch-hHHH
Confidence 888888843 32111 12221 01 122348888887777776522121 23333 5778
Q ss_pred HHHHHHHHHhhCCCeeEE
Q 022377 141 EICDFVELTRDRPINIRF 158 (298)
Q Consensus 141 ~i~~i~~~~~~~g~~~~~ 158 (298)
++.=+-+.+.++.+++..
T Consensus 158 Ql~vIrrmV~DL~~pv~I 175 (287)
T 3q12_A 158 QLALIRKMVADMGYDINI 175 (287)
T ss_dssp HHHHHHHHHHHHTCCCEE
T ss_pred HHHHHHHHHHHcCCCceE
Confidence 887777788887776543
No 156
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=56.42 E-value=72 Score=27.39 Aligned_cols=116 Identities=17% Similarity=0.219 Sum_probs=71.7
Q ss_pred CCCCCHHHHHHHHHHHHhCCCC--EEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCe
Q 022377 12 PQLLSLNEILRLAYLFVTSGVD--KIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTS 87 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~--~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~ 87 (298)
+.-.+.++..++++.+.++++. .+- ||+-..++ +-.+.+++..++ -|.+...+. .+.++++.+.+ .+.
T Consensus 190 n~~~~~~~a~~~~~~l~~~~i~~~~iE----~P~~~~~~-~~~~~l~~~~~i---pia~dE~~~~~~~~~~~i~~~~~d~ 261 (345)
T 2zad_A 190 NMGYTQKEAVEFARAVYQKGIDIAVYE----QPVRREDI-EGLKFVRFHSPF---PVAADESARTKFDVMRLVKEEAVDY 261 (345)
T ss_dssp TTCSCHHHHHHHHHHHHHTTCCCSEEE----CCSCTTCH-HHHHHHHHHSSS---CEEESTTCCSHHHHHHHHHHTCCSE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCeeeee----CCCCcccH-HHHHHHHHhCCC---CEEEeCCcCCHHHHHHHHHhCCCCE
Confidence 3456889999999999988877 665 88854343 444445543344 466777665 34566666554 676
Q ss_pred EEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhh
Q 022377 88 VNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 151 (298)
Q Consensus 88 v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~ 151 (298)
|++.+ .. +++...++.++.+.++|+ ++.+.+.. .+.-.+...+.++..
T Consensus 262 v~ik~-----------~~-GGit~~~~i~~~A~~~g~-~~~~~~~~---es~i~~aa~~hlaa~ 309 (345)
T 2zad_A 262 VNIKL-----------MK-SGISDALAIVEIAESSGL-KLMIGCMG---ESSLGINQSVHFALG 309 (345)
T ss_dssp EEECH-----------HH-HHHHHHHHHHHHHHTTTC-EEEECCSS---CCHHHHHHHHHHHHH
T ss_pred EEEec-----------cc-ccHHHHHHHHHHHHHcCC-eEEEecCc---ccHHHHHHHHHHHHc
Confidence 66643 12 457788888999999999 65444321 222234444555444
No 157
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=56.27 E-value=72 Score=26.71 Aligned_cols=126 Identities=11% Similarity=0.033 Sum_probs=67.5
Q ss_pred HHHHHHHHhCCCCEEEEcCCccCc--cc-----cHHHHHHHHhccCCCCcEEEEeCc---c----ch-------------
Q 022377 21 LRLAYLFVTSGVDKIRLTGGEPTV--RK-----DIEEACFHLSKLKGLKTLAMTTNG---L----TL------------- 73 (298)
Q Consensus 21 ~~~i~~~~~~~~~~v~~tGGEPll--~~-----~~~~ii~~~~~~~~~~~v~i~TNG---~----ll------------- 73 (298)
..+++.+.+.|...|-+....|.- .. +..++-+.+.+ .|+. +...+.+ . +.
T Consensus 38 ~~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gl~-i~~~~~~~~~~~~~~l~~~d~~~r~~~~~~ 115 (316)
T 3qxb_A 38 RLAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRK-AGLT-IESTFGGLASYTYNHFLAPTLELQSLGYQH 115 (316)
T ss_dssp HHHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHH-TTCE-EEEEECCHHHHTSCBTTCSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHH-cCCe-EEEeeccccccccccCCCCCHHHHHHHHHH
Confidence 345666678999999998654432 11 24456666666 5885 6543332 1 11
Q ss_pred -HhhHHHHHHcCCCeEEEecCCCCHHhhh-hhcCCCcHHHHHHHHHHHHH----cCCCC-EEEEEEEec---CCCHhHHH
Q 022377 74 -ARKLPKLKESGLTSVNISLDTLVPAKFE-FLTRRKGHEKVMESINAAIE----VGYNP-VKVNCVVMR---GFNDDEIC 143 (298)
Q Consensus 74 -~~~~~~l~~~~~~~v~iSldg~~~~~~~-~ir~~~~~~~v~~~i~~l~~----~g~~~-v~i~~vi~~---~~n~~~i~ 143 (298)
.+.++.....|...|.+.+.+.....+. .......+++++++++.+.+ .|+ . +.+..+-.. ..+.+++.
T Consensus 116 ~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv-~~l~lE~~~~~~~~~~t~~~~~ 194 (316)
T 3qxb_A 116 LKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGL-SMLYVEPVPLATEFPSSAADAA 194 (316)
T ss_dssp HHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTC-CEEEECCCSCTTBSSCSHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCC-eEEEEEecCCccccCCCHHHHH
Confidence 1224444556888887665542211111 00111236677777766654 588 6 665542111 12456677
Q ss_pred HHHHHH
Q 022377 144 DFVELT 149 (298)
Q Consensus 144 ~i~~~~ 149 (298)
++++.+
T Consensus 195 ~l~~~v 200 (316)
T 3qxb_A 195 RLMADL 200 (316)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777766
No 158
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=56.25 E-value=69 Score=26.73 Aligned_cols=105 Identities=16% Similarity=0.172 Sum_probs=54.9
Q ss_pred HHHHHHHHhccC-CCCcEEEEeCccch-H---hhHHHHHHcCCCeEEEecCCCCH---------HhhhhhcCCCcHHHHH
Q 022377 48 IEEACFHLSKLK-GLKTLAMTTNGLTL-A---RKLPKLKESGLTSVNISLDTLVP---------AKFEFLTRRKGHEKVM 113 (298)
Q Consensus 48 ~~~ii~~~~~~~-~~~~v~i~TNG~ll-~---~~~~~l~~~~~~~v~iSldg~~~---------~~~~~ir~~~~~~~v~ 113 (298)
+.+..+.+++.. .. .+...|.|.-- + +.+..|.++|.|.|.+.+---+| ...+.+.++-+.++++
T Consensus 7 i~~~f~~~~~~~~~a-li~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~ 85 (271)
T 3nav_A 7 YQALFQRLSAAQQGA-FVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICF 85 (271)
T ss_dssp HHHHHHHHHHTTBCE-EEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHhcCCCe-EEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 334445444421 22 25556777532 2 34666667777777777655333 1223344445577777
Q ss_pred HHHHHHHHc--CCCCEEEEEEEecCCCH---hHHHHHHHHHhhCCCeeEE
Q 022377 114 ESINAAIEV--GYNPVKVNCVVMRGFND---DEICDFVELTRDRPINIRF 158 (298)
Q Consensus 114 ~~i~~l~~~--g~~~v~i~~vi~~~~n~---~~i~~i~~~~~~~g~~~~~ 158 (298)
+.++.+++. .+ ++.+.+ + .|. -.++.+++.+.+.|++-..
T Consensus 86 ~~v~~~r~~~~~~-Pivlm~-Y---~n~v~~~g~~~f~~~~~~aGvdGvI 130 (271)
T 3nav_A 86 ELIAQIRARNPET-PIGLLM-Y---ANLVYARGIDDFYQRCQKAGVDSVL 130 (271)
T ss_dssp HHHHHHHHHCTTS-CEEEEE-C---HHHHHHTCHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHhcCCCC-CEEEEe-c---CcHHHHHhHHHHHHHHHHCCCCEEE
Confidence 777777764 34 443321 1 121 1356667777666765333
No 159
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=56.10 E-value=80 Score=25.58 Aligned_cols=110 Identities=12% Similarity=0.141 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHhCCCCE--EEEcCCc--cCccccHHHHHHHHhccCCCC-cEEEEeCccchHhhHHHHHHcCCCeEEEe
Q 022377 17 LNEILRLAYLFVTSGVDK--IRLTGGE--PTVRKDIEEACFHLSKLKGLK-TLAMTTNGLTLARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 17 ~e~~~~~i~~~~~~~~~~--v~~tGGE--Pll~~~~~~ii~~~~~~~~~~-~v~i~TNG~ll~~~~~~l~~~~~~~v~iS 91 (298)
+..+.+-++.+ +.|... +.+--|- |-+... ..+++.+++..+.. .+.+-++ --.+.++.+.++|.+.|.|.
T Consensus 12 ~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G-~~~v~~lr~~~~~~~dvhLmv~--dp~~~i~~~~~aGAd~itvh 87 (231)
T 3ctl_A 12 LLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLS-PFFVSQVKKLATKPLDCHLMVT--RPQDYIAQLARAGADFITLH 87 (231)
T ss_dssp GGGHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBC-HHHHHHHHTTCCSCEEEEEESS--CGGGTHHHHHHHTCSEEEEC
T ss_pred hhhHHHHHHHH-HcCCCEEEEEEEeCccCccchhc-HHHHHHHHhccCCcEEEEEEec--CHHHHHHHHHHcCCCEEEEC
Confidence 33455556666 667665 4444566 765543 35777777643332 2333333 12457899999999999888
Q ss_pred cCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHH
Q 022377 92 LDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFV 146 (298)
Q Consensus 92 ldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~ 146 (298)
...+. . ...+.++.++++|. .+.+ .+.++...+.+++++
T Consensus 88 ~Ea~~----------~---~~~~~i~~i~~~G~-k~gv--~lnp~tp~~~~~~~l 126 (231)
T 3ctl_A 88 PETIN----------G---QAFRLIDEIRRHDM-KVGL--ILNPETPVEAMKYYI 126 (231)
T ss_dssp GGGCT----------T---THHHHHHHHHHTTC-EEEE--EECTTCCGGGGTTTG
T ss_pred cccCC----------c---cHHHHHHHHHHcCC-eEEE--EEECCCcHHHHHHHH
Confidence 65421 1 23456777788888 6655 446643444454444
No 160
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=56.01 E-value=65 Score=28.32 Aligned_cols=11 Identities=0% Similarity=-0.016 Sum_probs=5.5
Q ss_pred HHHHHHHHHHH
Q 022377 109 HEKVMESINAA 119 (298)
Q Consensus 109 ~~~v~~~i~~l 119 (298)
.+.++.++..+
T Consensus 234 lE~vv~~L~~~ 244 (382)
T 2ztj_A 234 LGGFLARMYTL 244 (382)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 55555555444
No 161
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=55.85 E-value=96 Score=27.31 Aligned_cols=99 Identities=16% Similarity=0.147 Sum_probs=67.9
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcCCCeEEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESGLTSVNI 90 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~~~~v~i 90 (298)
+.-.+.++..++++.+.++++..|- ||+-..++. -++.+++..+ +-|.+...+. ...++.+.+.+++.|++
T Consensus 199 N~~~~~~~A~~~~~~L~~~~i~~iE----qP~~~~d~~-~~~~l~~~~~---iPIa~dE~~~~~~~~~~~i~~~~d~v~~ 270 (393)
T 4dwd_A 199 NNGYSVGGAIRVGRALEDLGYSWFE----EPVQHYHVG-AMGEVAQRLD---ITVSAGEQTYTLQALKDLILSGVRMVQP 270 (393)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCSEEE----CCSCTTCHH-HHHHHHHHCS---SEEEBCTTCCSHHHHHHHHHHTCCEECC
T ss_pred CCCCCHHHHHHHHHHHHhhCCCEEE----CCCCcccHH-HHHHHHhhCC---CCEEecCCcCCHHHHHHHHHcCCCEEEe
Confidence 4557899999999999999887776 798654543 3444554334 4567777666 34666766656776655
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 130 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 130 (298)
.+-- .+++...++....+.++|+ ++.+.
T Consensus 271 k~~~-----------~GGit~~~~ia~~A~~~gi-~~~~h 298 (393)
T 4dwd_A 271 DIVK-----------MGGITGMMQCAALAHAHGV-EFVPH 298 (393)
T ss_dssp CTTT-----------TTHHHHHHHHHHHHHHHTC-EECCC
T ss_pred Cccc-----------cCCHHHHHHHHHHHHHcCC-EEeec
Confidence 5422 3568889999999999999 65433
No 162
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=55.31 E-value=49 Score=29.51 Aligned_cols=82 Identities=20% Similarity=0.339 Sum_probs=53.6
Q ss_pred CCCCCCHHHHHHHHHH--------HHhCCCCEEEEcCCc---------cCccc-------------cH-HHHHHHHhccC
Q 022377 11 KPQLLSLNEILRLAYL--------FVTSGVDKIRLTGGE---------PTVRK-------------DI-EEACFHLSKLK 59 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~--------~~~~~~~~v~~tGGE---------Pll~~-------------~~-~~ii~~~~~~~ 59 (298)
...+||.+||.++++. +.+.|...|.+.||- |..+. .| .++++.+++.-
T Consensus 153 ~pr~lt~~eI~~ii~~~~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~ 232 (407)
T 3tjl_A 153 PVRALTTQEVKDLVYEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIV 232 (407)
T ss_dssp CCEECCHHHHHHHHHTHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHh
Confidence 3568999999999988 344789999999888 86542 24 38888877632
Q ss_pred CCCcEEEEeCc------cch-----------HhhHHHH---HHcC--CCeEEEec
Q 022377 60 GLKTLAMTTNG------LTL-----------ARKLPKL---KESG--LTSVNISL 92 (298)
Q Consensus 60 ~~~~v~i~TNG------~ll-----------~~~~~~l---~~~~--~~~v~iSl 92 (298)
+-..|.+--+. ... ...++.| .+.| +++|.||-
T Consensus 233 ~~~~v~~r~~~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~ 287 (407)
T 3tjl_A 233 GADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVE 287 (407)
T ss_dssp CGGGEEEEECTTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEEC
T ss_pred CCCeEEEEECcccccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEc
Confidence 21124433221 111 1235666 7778 99999984
No 163
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=55.31 E-value=60 Score=28.73 Aligned_cols=79 Identities=11% Similarity=0.022 Sum_probs=58.7
Q ss_pred CCCHHHHHHHHHHHHh-----CCCCEEEEc-C---------CccCcc----cc-HHHHHHHHhccCCCCcEEEEeCcc--
Q 022377 14 LLSLNEILRLAYLFVT-----SGVDKIRLT-G---------GEPTVR----KD-IEEACFHLSKLKGLKTLAMTTNGL-- 71 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~-----~~~~~v~~t-G---------GEPll~----~~-~~~ii~~~~~~~~~~~v~i~TNG~-- 71 (298)
.++.+.+.+.++.+.+ +|+..|.+= | |+.... |+ +..+++++++ +|++ +.|-+...
T Consensus 22 ~~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~r~~~G~~~~~~~kFP~Gl~~l~~~i~~-~Glk-~Giw~~pg~~ 99 (397)
T 3a5v_A 22 NVDEQLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERESSKTLLADPTKFPRGIKPLVDDIHN-LGLK-AGIYSSAGTL 99 (397)
T ss_dssp GCCHHHHHHHHHHHHHHTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHH-TTCE-EEEEEESSSB
T ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEECCCcCCCCCCCCCCeEEChhcCCcCHHHHHHHHHH-cCCE-EEEEecCCCC
Confidence 5789999999999888 778888772 2 444443 33 8899999999 5996 88876532
Q ss_pred ----------chHhhHHHHHHcCCCeEEEecCC
Q 022377 72 ----------TLARKLPKLKESGLTSVNISLDT 94 (298)
Q Consensus 72 ----------ll~~~~~~l~~~~~~~v~iSldg 94 (298)
.....++.+.+.|++.|-+..-.
T Consensus 100 tc~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~~ 132 (397)
T 3a5v_A 100 TCGGHIASLGYEDIDAKTWAKWGIDYLKYDNCY 132 (397)
T ss_dssp CTTSCBCCTTCHHHHHHHHHHHTCCEEEEECTT
T ss_pred ccCCCHHHHHHHHHHHHHHHHcCCCEEEECCCc
Confidence 22456788889999999888654
No 164
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=55.10 E-value=1e+02 Score=26.63 Aligned_cols=61 Identities=15% Similarity=0.233 Sum_probs=38.9
Q ss_pred HHHhCCCCEEEEc--CCccCcccc---------HHHHHHHHh-cc-C----CCCcEEEEeCccchHhhHHHHHHcCCCeE
Q 022377 26 LFVTSGVDKIRLT--GGEPTVRKD---------IEEACFHLS-KL-K----GLKTLAMTTNGLTLARKLPKLKESGLTSV 88 (298)
Q Consensus 26 ~~~~~~~~~v~~t--GGEPll~~~---------~~~ii~~~~-~~-~----~~~~v~i~TNG~ll~~~~~~l~~~~~~~v 88 (298)
...+.|+..|.+. .| .+|.|+ +.++++.++ +. . +.. +.+.+.|. ...++.+.+.|++.+
T Consensus 205 ~~i~aGad~i~i~D~~~-~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p-~i~~~~G~--~~~l~~l~~~g~d~i 280 (367)
T 1r3s_A 205 GQVVAGAQALQLFESHA-GHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVP-MIIFAKDG--HFALEELAQAGYEVV 280 (367)
T ss_dssp HHHHTTCSEEEEEETTG-GGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCC-EEEEETTC--GGGHHHHTTSSCSEE
T ss_pred HHHHhCCCEEEEecCcc-ccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCC-eEEEcCCc--HHHHHHHHhcCCCEE
Confidence 3344677777663 34 377765 336667776 42 0 464 66777775 567888999999965
Q ss_pred EE
Q 022377 89 NI 90 (298)
Q Consensus 89 ~i 90 (298)
++
T Consensus 281 ~~ 282 (367)
T 1r3s_A 281 GL 282 (367)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 165
>1pzr_A Erythronolide synthase; four helix bundle, homodimer, transferase; NMR {Saccharopolyspora erythraea} SCOP: a.38.2.1
Probab=55.08 E-value=5.3 Score=25.26 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=20.3
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCccCcccc-----HHHHHHHHhc
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLTGGEPTVRKD-----IEEACFHLSK 57 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~-----~~~ii~~~~~ 57 (298)
+.+++..++++ .|.|||||+.-. -.++.++++.
T Consensus 2 ~~~~~~~~~~~---------~~~~~~~~~~tg~~m~~eeKLrdyLkr 39 (60)
T 1pzr_A 2 SDDELFSMLDQ---------RFGGGEDLLMSGDNGMTEEKLRRYLKR 39 (60)
T ss_dssp CHHHHHHHHHH---------HHHCCCSSCCCCCCSSHHHHHHHHHHH
T ss_pred chHHHHHHHHH---------HhcCCchHHhcCCCCCCHHHHHHHHHH
Confidence 34566666664 256999999755 3355555543
No 166
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=55.05 E-value=97 Score=26.27 Aligned_cols=124 Identities=10% Similarity=-0.007 Sum_probs=74.5
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCcccc--HHHHHHHHh---ccCCCCcEEEEeCccchHhhHHHHHH--cCCC
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKD--IEEACFHLS---KLKGLKTLAMTTNGLTLARKLPKLKE--SGLT 86 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~--~~~ii~~~~---~~~~~~~v~i~TNG~ll~~~~~~l~~--~~~~ 86 (298)
.-+.+.+.+...++.+.|..-|.+.||.+.+... +.+++..+. +..++. ++|.|-= .+.++.-.+ +|.+
T Consensus 33 ~~~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~~~~~~~vp-isIDT~~---~~V~eaaL~~~~Ga~ 108 (300)
T 3k13_A 33 EKKYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSEPEIARVP-VMIDSSK---WEVIEAGLKCLQGKS 108 (300)
T ss_dssp TTCHHHHHHHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHTCHHHHTSC-EEEECSC---HHHHHHHHHHCSSCC
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHhhhcCCCe-EEEeCCC---HHHHHHHHHhcCCCC
Confidence 4567888888888888999999999888776542 445665554 224775 8998842 344444445 5766
Q ss_pred eEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEE---EecCCCHhH----HHHHHHHH-hhCCCe
Q 022377 87 SVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCV---VMRGFNDDE----ICDFVELT-RDRPIN 155 (298)
Q Consensus 87 ~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~v---i~~~~n~~~----i~~i~~~~-~~~g~~ 155 (298)
+.=|+.+...+ ..|+ +-+..++++|. .+.+... -++ .+.++ .+.+.+.+ .+.|++
T Consensus 109 -iINdIs~~~~d--------~~~~---~~~~l~a~~ga-~vV~mh~d~~G~p-~t~~~~~~i~~r~~~~~~~~~Gi~ 171 (300)
T 3k13_A 109 -IVNSISLKEGE--------EVFL---EHARIIKQYGA-ATVVMAFDEKGQA-DTAARKIEVCERAYRLLVDKVGFN 171 (300)
T ss_dssp -EEEEECSTTCH--------HHHH---HHHHHHHHHTC-EEEEESEETTEEC-CSHHHHHHHHHHHHHHHHHHTCCC
T ss_pred -EEEeCCcccCC--------hhHH---HHHHHHHHhCC-eEEEEeeCCCCCC-CCHHHHHHHHHHHHHHHHHHcCCC
Confidence 55566553211 1133 44566678888 6654432 133 34444 34455554 678883
No 167
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=54.67 E-value=1.1e+02 Score=26.60 Aligned_cols=97 Identities=13% Similarity=0.111 Sum_probs=63.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++..++++.+.++++..|- ||+-..++. -++.+++..++ -|.+++.+. .+.++++.+.+ ++.|++
T Consensus 200 ~~~~~~~a~~~~~~l~~~~i~~iE----qP~~~~d~~-~~~~l~~~~~i---PI~~dE~~~~~~~~~~~i~~~~~d~v~i 271 (371)
T 2ovl_A 200 MKWTVDGAIRAARALAPFDLHWIE----EPTIPDDLV-GNARIVRESGH---TIAGGENLHTLYDFHNAVRAGSLTLPEP 271 (371)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSEEE----CCSCTTCHH-HHHHHHHHHCS---CEEECTTCCSHHHHHHHHHHTCCSEECC
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE----CCCCcccHH-HHHHHHhhCCC---CEEeCCCCCCHHHHHHHHHcCCCCEEee
Confidence 456888988899988888877664 787443443 33444442244 366777665 35566665544 666555
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
.+. ..+++...++.++.+.++|+ ++.+
T Consensus 272 k~~-----------~~GGi~~~~~i~~~A~~~gi-~~~~ 298 (371)
T 2ovl_A 272 DVS-----------NIGGYTTFRKVAALAEANNM-LLTS 298 (371)
T ss_dssp CTT-----------TTTSHHHHHHHHHHHHHTTC-CEEE
T ss_pred Ccc-----------ccCCHHHHHHHHHHHHHcCC-eEcc
Confidence 432 23568899999999999999 6543
No 168
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=54.49 E-value=40 Score=32.04 Aligned_cols=75 Identities=16% Similarity=0.116 Sum_probs=53.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCC--ccCcc--------ccHHHHHHHHhccCCCCcEEEEeCccc-hHhhHHHHHH
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGG--EPTVR--------KDIEEACFHLSKLKGLKTLAMTTNGLT-LARKLPKLKE 82 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGG--EPll~--------~~~~~ii~~~~~~~~~~~v~i~TNG~l-l~~~~~~l~~ 82 (298)
-.+.++...+++.+.+.|+..|.+++| ||... ....+.++.+++..++ -+..||-+ ..+.++++.+
T Consensus 224 g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i---Pvi~~Ggi~~~~~a~~~l~ 300 (671)
T 1ps9_A 224 GGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSL---PLVTTNRINDPQVADDILS 300 (671)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSS---CEEECSSCCSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCc---eEEEeCCCCCHHHHHHHHH
Confidence 367889999999999999999998865 43221 1245777888775444 35566655 4677888888
Q ss_pred cC-CCeEEEe
Q 022377 83 SG-LTSVNIS 91 (298)
Q Consensus 83 ~~-~~~v~iS 91 (298)
.| .|.|.+.
T Consensus 301 ~g~aD~V~~g 310 (671)
T 1ps9_A 301 RGDADMVSMA 310 (671)
T ss_dssp TTSCSEEEES
T ss_pred cCCCCEEEeC
Confidence 77 8888875
No 169
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=54.35 E-value=1.1e+02 Score=26.77 Aligned_cols=135 Identities=10% Similarity=0.006 Sum_probs=83.0
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccCccccH-HHHHHHHhccC-CCCcEEEEeCccch-Hh---hHHHHHHcCCCeE
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDI-EEACFHLSKLK-GLKTLAMTTNGLTL-AR---KLPKLKESGLTSV 88 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~-~~ii~~~~~~~-~~~~v~i~TNG~ll-~~---~~~~l~~~~~~~v 88 (298)
.+.+++.+.+.++.+.|...|.+-.|- +++. .++++.+++.. ++ .+.+.-|+... ++ .++.|.+.++++|
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g~---~~~~~~e~v~avr~a~gd~-~l~vD~n~~~~~~~a~~~~~~l~~~~i~~i 221 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVGR---GEKLDLEITAAVRGEIGDA-RLRLDANEGWSVHDAINMCRKLEKYDIEFI 221 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCS---CHHHHHHHHHHHHTTSTTC-EEEEECTTCCCHHHHHHHHHHHGGGCCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcCC---CHHHHHHHHHHHHHHcCCc-EEEEecCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 478888888888888899999987543 4443 48888888754 46 48888897654 33 3566667789888
Q ss_pred EEecCCCCHHhhhhhcC--------CCcHHHHHHHHHHHHHcCCCCEEEEEEEec-CCCHhHHHHHHHHHhhCCCee
Q 022377 89 NISLDTLVPAKFEFLTR--------RKGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~--------~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~-~~n~~~i~~i~~~~~~~g~~~ 156 (298)
.=.+...+-+.+..++. ..++. -.+.++.+.+.+... .++.-+.+ | ...+..++++++...|+.+
T Consensus 222 EqP~~~~~~~~~~~l~~~~~iPI~~de~i~-~~~~~~~~i~~~~~d-~v~ik~~~~G-Git~~~~i~~~A~~~g~~~ 295 (384)
T 2pgw_A 222 EQPTVSWSIPAMAHVREKVGIPIVADQAAF-TLYDVYEICRQRAAD-MICIGPREIG-GIQPMMKAAAVAEAAGLKI 295 (384)
T ss_dssp ECCSCTTCHHHHHHHHHHCSSCEEESTTCC-SHHHHHHHHHTTCCS-EEEECHHHHT-SHHHHHHHHHHHHHTTCCE
T ss_pred eCCCChhhHHHHHHHHhhCCCCEEEeCCcC-CHHHHHHHHHcCCCC-EEEEcchhhC-CHHHHHHHHHHHHHCCCeE
Confidence 76554444455555542 11111 123444444544312 12222222 2 5677888888898888864
No 170
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=54.30 E-value=73 Score=27.78 Aligned_cols=59 Identities=17% Similarity=0.261 Sum_probs=34.3
Q ss_pred HhCCCCEEEEc--CCccCcccc---------HHHHHHHHhccC---CCCcEEEEeCccchHhhHHHHHHcCCCeEEE
Q 022377 28 VTSGVDKIRLT--GGEPTVRKD---------IEEACFHLSKLK---GLKTLAMTTNGLTLARKLPKLKESGLTSVNI 90 (298)
Q Consensus 28 ~~~~~~~v~~t--GGEPll~~~---------~~~ii~~~~~~~---~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~i 90 (298)
.+.|+..|.+. -| .+|.|+ +.++++.+++.. ++. +.+.+.|. ...++.+.+.|.+.+++
T Consensus 207 i~aGad~i~ifDs~~-~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~p-vi~f~~g~--~~~l~~l~~~g~d~i~~ 279 (368)
T 4exq_A 207 IEAGAQAVMIFDTWG-GALADGAYQRFSLDYIRRVVAQLKREHDGARVP-AIAFTKGG--GLWLEDLAATGVDAVGL 279 (368)
T ss_dssp HHHTCSEEEEEETTG-GGSCTTHHHHHTHHHHHHHHHTSCCEETTEECC-EEEEETTC--GGGHHHHHTSSCSEEEC
T ss_pred HHhCCCEEEEeCCcc-ccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCc-EEEEcCCc--HHHHHHHHHhCCCEEee
Confidence 34577777653 23 267765 224455554421 354 55556664 45678888999996644
No 171
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=54.22 E-value=58 Score=28.19 Aligned_cols=75 Identities=23% Similarity=0.220 Sum_probs=47.5
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc-CC-ccC--c--ccc-HHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLT-GG-EPT--V--RKD-IEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG- 84 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~t-GG-EPl--l--~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~- 84 (298)
-++.++...+++.+.+.|+..|.++ |+ .|. . .+. ..++++.+++..++ -+..+|-.. .+.++++.+.|
T Consensus 235 g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~i---PVi~~Ggi~t~e~a~~~l~~G~ 311 (349)
T 3hgj_A 235 GWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGL---RTGAVGLITTPEQAETLLQAGS 311 (349)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCC---EEEECSSCCCHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCc---eEEEECCCCCHHHHHHHHHCCC
Confidence 4677888888888888888888887 32 111 1 121 34566666653333 355666543 56677777777
Q ss_pred CCeEEEe
Q 022377 85 LTSVNIS 91 (298)
Q Consensus 85 ~~~v~iS 91 (298)
.|.|.+.
T Consensus 312 aD~V~iG 318 (349)
T 3hgj_A 312 ADLVLLG 318 (349)
T ss_dssp CSEEEES
T ss_pred ceEEEec
Confidence 7877765
No 172
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=54.08 E-value=1.1e+02 Score=26.70 Aligned_cols=24 Identities=25% Similarity=0.457 Sum_probs=11.6
Q ss_pred HHHHHHhccCCCCcEEE-EeCccchH
Q 022377 50 EACFHLSKLKGLKTLAM-TTNGLTLA 74 (298)
Q Consensus 50 ~ii~~~~~~~~~~~v~i-~TNG~ll~ 74 (298)
++++.+.+. |...+.+ .|+|...+
T Consensus 161 ~~~~~~~~~-Ga~~i~l~DT~G~~~P 185 (370)
T 3rmj_A 161 EICGAVIEA-GATTINIPDTVGYSIP 185 (370)
T ss_dssp HHHHHHHHH-TCCEEEEECSSSCCCH
T ss_pred HHHHHHHHc-CCCEEEecCccCCcCH
Confidence 555555553 4433332 36665554
No 173
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=53.90 E-value=97 Score=26.79 Aligned_cols=94 Identities=18% Similarity=0.157 Sum_probs=62.2
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++ .++++.+.++++..+- ||+-..+ .+-.+.+++..++ -|.+...+. .+.++++.+.+ .+.|++
T Consensus 192 ~~~~~~~-~~~~~~l~~~~i~~iE----~P~~~~~-~~~~~~l~~~~~i---pIa~dE~~~~~~~~~~~i~~~~~d~v~i 262 (368)
T 1sjd_A 192 TAYTLGD-APQLARLDPFGLLLIE----QPLEEED-VLGHAELARRIQT---PICLDESIVSARAAADAIKLGAVQIVNI 262 (368)
T ss_dssp TCCCGGG-HHHHHTTGGGCCSEEE----CCSCTTC-HHHHHHHHTTCSS---CEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCCCHHH-HHHHHHHHhcCCCeEe----CCCChhh-HHHHHHHHHhCCC---CEEECCCcCCHHHHHHHHHcCCCCEEEe
Confidence 4467778 8888888888877664 7874334 3444455543344 466777655 35667766654 677777
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
.+. ..+++..+++.++.+.++|+ ++
T Consensus 263 k~~-----------~~GGit~~~~i~~~A~~~g~-~~ 287 (368)
T 1sjd_A 263 KPG-----------RVGGYLEARRVHDVCAAHGI-PV 287 (368)
T ss_dssp CTT-----------TTTSHHHHHHHHHHHHHTTC-CE
T ss_pred ccc-----------ccCCHHHHHHHHHHHHHcCC-cE
Confidence 442 23578899999999999999 65
No 174
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=53.67 E-value=97 Score=25.82 Aligned_cols=119 Identities=14% Similarity=0.141 Sum_probs=76.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEc--CCccCccccH------------------HHHHHHHhcc-CCCCcEEEEe--C
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLT--GGEPTVRKDI------------------EEACFHLSKL-KGLKTLAMTT--N 69 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~t--GGEPll~~~~------------------~~ii~~~~~~-~~~~~v~i~T--N 69 (298)
..-+.+...+++..+.+.|+.-|-+. =-+|+..... .++++.+++. ..+. +.+-| |
T Consensus 29 GdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~P-ivlm~Y~n 107 (271)
T 3nav_A 29 GDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETP-IGLLMYAN 107 (271)
T ss_dssp TSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSC-EEEEECHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCC-EEEEecCc
Confidence 34578888999999998887755553 4677766443 3467777663 3564 55545 5
Q ss_pred ccc---hHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHH
Q 022377 70 GLT---LARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFV 146 (298)
Q Consensus 70 G~l---l~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~ 146 (298)
-.+ +++.++.+.++|++.+.+. |-+-+ ...+..+.+.++|+ .+ -..+.+....+.+..+.
T Consensus 108 ~v~~~g~~~f~~~~~~aGvdGvIip-Dlp~e-------------e~~~~~~~~~~~gl-~~--I~lvap~t~~eri~~i~ 170 (271)
T 3nav_A 108 LVYARGIDDFYQRCQKAGVDSVLIA-DVPTN-------------ESQPFVAAAEKFGI-QP--IFIAPPTASDETLRAVA 170 (271)
T ss_dssp HHHHTCHHHHHHHHHHHTCCEEEET-TSCGG-------------GCHHHHHHHHHTTC-EE--EEEECTTCCHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHCCCCEEEEC-CCCHH-------------HHHHHHHHHHHcCC-eE--EEEECCCCCHHHHHHHH
Confidence 422 2567899999999987775 66432 24455667788888 43 34445533445566666
Q ss_pred HHH
Q 022377 147 ELT 149 (298)
Q Consensus 147 ~~~ 149 (298)
+..
T Consensus 171 ~~~ 173 (271)
T 3nav_A 171 QLG 173 (271)
T ss_dssp HHC
T ss_pred HHC
Confidence 653
No 175
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=53.45 E-value=46 Score=28.11 Aligned_cols=72 Identities=15% Similarity=0.216 Sum_probs=41.1
Q ss_pred HHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHH-cCCCeEEEecCC
Q 022377 21 LRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKE-SGLTSVNISLDT 94 (298)
Q Consensus 21 ~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~-~~~~~v~iSldg 94 (298)
.+.++.+.++|+..|--+||.|.....+..+-+.+... +-. +.|.--|=+..+.+..+.+ .|++.+..|-..
T Consensus 169 ~~Ale~Li~lGvdrILTSG~~~~a~~Gl~~Lk~Lv~~a-~~r-I~ImaGGGV~~~Ni~~l~~~tG~~~~H~S~~~ 241 (287)
T 3iwp_A 169 MAALETLLTLGFERVLTSGCDSSALEGLPLIKRLIEQA-KGR-IVVMPGGGITDRNLQRILEGSGATEFHCSARS 241 (287)
T ss_dssp HHHHHHHHHHTCSEEEECTTSSSTTTTHHHHHHHHHHH-TTS-SEEEECTTCCTTTHHHHHHHHCCSEEEECCEE
T ss_pred HHHHHHHHHcCCCEEECCCCCCChHHhHHHHHHHHHHh-CCC-CEEEECCCcCHHHHHHHHHhhCCCEEeECcCc
Confidence 34556666678888888888887644433332222221 211 4443333244556666655 788888888654
No 176
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=53.09 E-value=1.2e+02 Score=26.58 Aligned_cols=94 Identities=16% Similarity=0.151 Sum_probs=65.1
Q ss_pred CCCCHHHHHHHHHHHHh--CCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchH-hhHHHHHHcC-CCeE
Q 022377 13 QLLSLNEILRLAYLFVT--SGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESG-LTSV 88 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~--~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~-~~~~~l~~~~-~~~v 88 (298)
.-.+.++..++++.+.+ +++..+- ||+-..+ .+..+.+++..+ . +-|.+++.+ + +.++++.+.+ ++.|
T Consensus 199 ~~~~~~~a~~~~~~l~~~g~~i~~iE----qP~~~~~-~~~~~~l~~~~~-~-iPIa~dE~~-~~~~~~~~i~~~~~d~v 270 (389)
T 2oz8_A 199 EAWTSKEALTKLVAIREAGHDLLWVE----DPILRHD-HDGLRTLRHAVT-W-TQINSGEYL-DLQGKRLLLEAHAADIL 270 (389)
T ss_dssp TCBCHHHHHHHHHHHHHTTCCCSEEE----SCBCTTC-HHHHHHHHHHCC-S-SEEEECTTC-CHHHHHHHHHTTCCSEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCceEEe----CCCCCcC-HHHHHHHHhhCC-C-CCEEeCCCC-CHHHHHHHHHcCCCCEE
Confidence 45688999999999988 7766553 7874334 344455555331 2 457777776 4 4567776655 7777
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEE
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 130 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 130 (298)
++. +++..+++.++.+.++|+ .+.+.
T Consensus 271 ~ik---------------GGit~a~~i~~~A~~~gi-~~~~~ 296 (389)
T 2oz8_A 271 NVH---------------GQVTDVMRIGWLAAELGI-PISIG 296 (389)
T ss_dssp EEC---------------SCHHHHHHHHHHHHHHTC-CEEEC
T ss_pred EEC---------------cCHHHHHHHHHHHHHcCC-eEeec
Confidence 774 568899999999999999 76554
No 177
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=53.01 E-value=51 Score=28.94 Aligned_cols=96 Identities=14% Similarity=-0.021 Sum_probs=63.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++..++++.+.++++..|. ||+- ++-.+..+.+++..+ +-|.+++.+. .+.++++.+.+ .+.|++
T Consensus 217 ~~~~~~~a~~~~~~l~~~~i~~iE----qP~~-~~d~~~~~~l~~~~~---iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 288 (388)
T 2nql_A 217 WNQTPERALELIAEMQPFDPWFAE----APVW-TEDIAGLEKVSKNTD---VPIAVGEEWRTHWDMRARIERCRIAIVQP 288 (388)
T ss_dssp SCSCHHHHHHHHHHHGGGCCSCEE----CCSC-TTCHHHHHHHHTSCC---SCEEECTTCCSHHHHHHHHTTSCCSEECC
T ss_pred CCCCHHHHHHHHHHHhhcCCCEEE----CCCC-hhhHHHHHHHHhhCC---CCEEEeCCcCCHHHHHHHHHcCCCCEEEe
Confidence 456888988999988888877664 6774 333444555555334 4466787766 45677777655 565554
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
.+ .. +++...++.++.+.++|+ ++.+
T Consensus 289 k~-----------~~-GGit~~~~i~~~A~~~g~-~~~~ 314 (388)
T 2nql_A 289 EM-----------GH-KGITNFIRIGALAAEHGI-DVIP 314 (388)
T ss_dssp CH-----------HH-HCHHHHHHHHHHHHHHTC-EECC
T ss_pred cC-----------CC-CCHHHHHHHHHHHHHcCC-eEEe
Confidence 21 12 468888999999999999 5533
No 178
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=52.96 E-value=85 Score=24.99 Aligned_cols=54 Identities=17% Similarity=0.252 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch
Q 022377 18 NEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 73 (298)
Q Consensus 18 e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll 73 (298)
+++.+.+.+..+.|-..+.+++|.|+++.-...+++.+.+. ++. +.+.-.-+.+
T Consensus 81 ~~~~~~i~~~~~~g~~V~~l~~GDP~i~~~~~~l~~~~~~~-gi~-v~viPGiSs~ 134 (232)
T 2qbu_A 81 DSAARMVAAELEDGRDVAFITLGDPSIYSTFSYLQQRIEDM-GFK-TEMVPGVTSF 134 (232)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESBCTTBSCSHHHHHHHHHHT-TCC-EEEECCCCHH
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCCccchhHHHHHHHHHHC-CCc-EEEeCCccHH
Confidence 44444444444456567778899999998888999999884 885 8887655544
No 179
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=52.92 E-value=79 Score=26.58 Aligned_cols=76 Identities=17% Similarity=0.020 Sum_probs=51.4
Q ss_pred CCHHHHHHHHHHHHhCCCC-EEEEcCCccCc--------ccc-HHHHHHHHhccCCCCcEEEEeCccch----HhhHHHH
Q 022377 15 LSLNEILRLAYLFVTSGVD-KIRLTGGEPTV--------RKD-IEEACFHLSKLKGLKTLAMTTNGLTL----ARKLPKL 80 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~-~v~~tGGEPll--------~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll----~~~~~~l 80 (298)
-+.+++.+.++.+.+.|.. .|.+..+-|.. .++ +.++++.+++..++. +.+=.+..+. .+.++.+
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~P-v~vKi~~~~~~~~~~~~a~~~ 181 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKP-LGVKLPPYFDLVHFDIMAEIL 181 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSC-EEEEECCCCSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCC-EEEEECCCCCHHHHHHHHHHH
Confidence 4788999999999998888 77776555543 333 458888888754554 5544443332 2236777
Q ss_pred HHcCCCeEEEe
Q 022377 81 KESGLTSVNIS 91 (298)
Q Consensus 81 ~~~~~~~v~iS 91 (298)
.++|++.|.++
T Consensus 182 ~~~G~d~i~v~ 192 (311)
T 1jub_A 182 NQFPLTYVNSV 192 (311)
T ss_dssp TTSCCCEEEEC
T ss_pred HHcCCcEEEec
Confidence 78899988775
No 180
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=52.41 E-value=1e+02 Score=25.68 Aligned_cols=121 Identities=10% Similarity=-0.019 Sum_probs=73.8
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccCcc-c-cHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHc--CCCeEEE
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVR-K-DIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKES--GLTSVNI 90 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~-~-~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~--~~~~v~i 90 (298)
.+.+.+.+...++.+.|..-|.+.|+-+.-. . .+..+++.+++..++. ++|.|- -.+.++.-.++ |.+ +--
T Consensus 31 ~~~~~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~p-isIDT~---~~~v~~aal~a~~Ga~-iIN 105 (271)
T 2yci_X 31 KDPRPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLP-CCLDST---NPDAIEAGLKVHRGHA-MIN 105 (271)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCCC-EEEECS---CHHHHHHHHHHCCSCC-EEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCCe-EEEeCC---CHHHHHHHHHhCCCCC-EEE
Confidence 4567888888888889977777766553321 1 2667788777645775 888876 23445555555 777 444
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEE---ecCCC----HhHHHHHHHHHhhCCCe
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV---MRGFN----DDEICDFVELTRDRPIN 155 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi---~~~~n----~~~i~~i~~~~~~~g~~ 155 (298)
|+.+. .+. |+. -+..+.++|. .+.+...- ++ .+ .+.+.+.++.+.+.|++
T Consensus 106 dvs~~-~d~---------~~~---~~~~~a~~~~-~vv~m~~d~~G~p-~t~~~~~~~l~~~~~~a~~~Gi~ 162 (271)
T 2yci_X 106 STSAD-QWK---------MDI---FFPMAKKYEA-AIIGLTMNEKGVP-KDANDRSQLAMELVANADAHGIP 162 (271)
T ss_dssp EECSC-HHH---------HHH---HHHHHHHHTC-EEEEESCBTTBCC-CSHHHHHHHHHHHHHHHHHTTCC
T ss_pred ECCCC-ccc---------cHH---HHHHHHHcCC-CEEEEecCCCCCC-CCHHHHHHHHHHHHHHHHHCCCC
Confidence 55442 121 333 3455677888 55433321 12 23 34577788888888985
No 181
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=52.37 E-value=72 Score=28.57 Aligned_cols=57 Identities=12% Similarity=0.216 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCccCcc-cc-HHHHHHHHhccCCCCcEE-EEeCccchHh
Q 022377 17 LNEILRLAYLFVTSGVDKIRLTGGEPTVR-KD-IEEACFHLSKLKGLKTLA-MTTNGLTLAR 75 (298)
Q Consensus 17 ~e~~~~~i~~~~~~~~~~v~~tGGEPll~-~~-~~~ii~~~~~~~~~~~v~-i~TNG~ll~~ 75 (298)
.+.+.+.++.+++.| ..|.|+.-+.+-. ++ +.++++.+.+. |...+. ..|+|...+.
T Consensus 150 l~~~~~~v~~ak~~G-~~V~~~~eda~r~d~~~~~~v~~~~~~~-Ga~~i~l~DTvG~~~P~ 209 (423)
T 3ivs_A 150 IDSATEVINFVKSKG-IEVRFSSEDSFRSDLVDLLSLYKAVDKI-GVNRVGIADTVGCATPR 209 (423)
T ss_dssp HHHHHHHHHHHHTTT-CEEEEEEESGGGSCHHHHHHHHHHHHHH-CCSEEEEEETTSCCCHH
T ss_pred HHHHHHHHHHHHHCC-CEEEEEEccCcCCCHHHHHHHHHHHHHh-CCCccccCCccCcCCHH
Confidence 455555666666666 4455553333322 22 34666666663 554343 3477776654
No 182
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=52.23 E-value=52 Score=27.29 Aligned_cols=66 Identities=11% Similarity=0.170 Sum_probs=33.9
Q ss_pred HHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEe
Q 022377 23 LAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 23 ~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iS 91 (298)
.++.+.++|+.+|-=+||.|.....+..+-+.+.. .+ . +.|.--|=+..+.+..+...|+..+..|
T Consensus 133 ale~L~~lG~~rILTSG~~~~a~~g~~~L~~Lv~~-a~-~-i~Im~GgGv~~~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 133 TLNNLAELGIARVLTSGQKSDALQGLSKIMELIAH-RD-A-PIIMAGAGVRAENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp HHHHHHHHTCCEEEECTTSSSTTTTHHHHHHHHTS-SS-C-CEEEEESSCCTTTHHHHHHHTCSEEEEC
T ss_pred HHHHHHHcCCCEEECCCCCCCHHHHHHHHHHHHHh-hC-C-cEEEecCCcCHHHHHHHHHcCCCeEeEC
Confidence 35555666766666667776655444433333332 23 2 3333322233344444556677777766
No 183
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=51.33 E-value=56 Score=26.51 Aligned_cols=118 Identities=11% Similarity=0.077 Sum_probs=67.2
Q ss_pred HHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEE-ecCCCCHHhhh
Q 022377 23 LAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNI-SLDTLVPAKFE 101 (298)
Q Consensus 23 ~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~i-Sldg~~~~~~~ 101 (298)
+++.+.+.|...|++.+-.|. +++.++++.+++. |++ +.+..|...-.+.++.+.+ +++.|-+ |++..-.. .
T Consensus 72 ~i~~~~~aGAd~itvh~Ea~~--~~~~~~i~~i~~~-G~k-~gv~lnp~tp~~~~~~~l~-~~D~VlvmsV~pGfgg--Q 144 (231)
T 3ctl_A 72 YIAQLARAGADFITLHPETIN--GQAFRLIDEIRRH-DMK-VGLILNPETPVEAMKYYIH-KADKITVMTVDPGFAG--Q 144 (231)
T ss_dssp THHHHHHHTCSEEEECGGGCT--TTHHHHHHHHHHT-TCE-EEEEECTTCCGGGGTTTGG-GCSEEEEESSCTTCSS--C
T ss_pred HHHHHHHcCCCEEEECcccCC--ccHHHHHHHHHHc-CCe-EEEEEECCCcHHHHHHHHh-cCCEEEEeeeccCcCC--c
Confidence 467777788899999854324 3567899999984 985 8888887544455555555 5787653 55431100 0
Q ss_pred hhcCCCcHHHHHHHHHHHH-HcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCee
Q 022377 102 FLTRRKGHEKVMESINAAI-EVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 102 ~ir~~~~~~~v~~~i~~l~-~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~~ 156 (298)
.+ .....+++ +.++.+. +.|. .+. +.+.-|.|.+.+.++++ .|+++
T Consensus 145 ~f-~~~~l~kI-~~lr~~~~~~~~-~~~--I~VdGGI~~~~~~~~~~----aGAd~ 191 (231)
T 3ctl_A 145 PF-IPEMLDKL-AELKAWREREGL-EYE--IEVDGSCNQATYEKLMA----AGADV 191 (231)
T ss_dssp CC-CTTHHHHH-HHHHHHHHHHTC-CCE--EEEESCCSTTTHHHHHH----HTCCE
T ss_pred cc-cHHHHHHH-HHHHHHHhccCC-Cce--EEEECCcCHHHHHHHHH----cCCCE
Confidence 00 11123333 3333333 2444 333 34445677777766654 35653
No 184
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=51.21 E-value=1e+02 Score=27.03 Aligned_cols=94 Identities=12% Similarity=0.016 Sum_probs=63.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-----CC
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-----LT 86 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-----~~ 86 (298)
.-.+.++..++++.+.++++..+- ||+-..++ +..+.+++..+ +-|.++..+. .+.++++.+.+ .+
T Consensus 219 ~~~~~~~a~~~~~~l~~~~i~~iE----qP~~~~d~-~~~~~l~~~~~---iPIa~dE~~~~~~~~~~~i~~~~~~~~~d 290 (392)
T 1tzz_A 219 GRFNLETGIAYAKMLRDYPLFWYE----EVGDPLDY-ALQAALAEFYP---GPMATGENLFSHQDARNLLRYGGMRPDRD 290 (392)
T ss_dssp TCCCHHHHHHHHHHHTTSCCSEEE----CCSCTTCH-HHHHHHTTTCC---SCEEECTTCCSHHHHHHHHHHSCCCTTTC
T ss_pred CCCCHHHHHHHHHHHHHcCCCeec----CCCChhhH-HHHHHHHhhCC---CCEEECCCCCCHHHHHHHHHcCCCccCCc
Confidence 456888888889888888877665 78754443 44445554333 4466777665 45667776665 66
Q ss_pred eEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCC
Q 022377 87 SVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNP 126 (298)
Q Consensus 87 ~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~ 126 (298)
.|++.+. ..+++..+++.++.+.++|+ .
T Consensus 291 ~v~ik~~-----------~~GGit~~~~i~~~A~~~gi-~ 318 (392)
T 1tzz_A 291 WLQFDCA-----------LSYGLCEYQRTLEVLKTHGW-S 318 (392)
T ss_dssp EECCCTT-----------TTTCHHHHHHHHHHHHHTTC-C
T ss_pred EEEECcc-----------ccCCHHHHHHHHHHHHHCCC-C
Confidence 5555432 23578899999999999999 6
No 185
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=51.18 E-value=2.1e+02 Score=29.25 Aligned_cols=116 Identities=19% Similarity=0.254 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEc--CCccCcccc-HHHHHHHHhccCCCCcEEEEeC---ccchHhhHHHHHHcCCCeE
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLT--GGEPTVRKD-IEEACFHLSKLKGLKTLAMTTN---GLTLARKLPKLKESGLTSV 88 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~t--GGEPll~~~-~~~ii~~~~~~~~~~~v~i~TN---G~ll~~~~~~l~~~~~~~v 88 (298)
-+.+.+.++++++.+.|+..|+|. -| ++.|. +.++++.+++..++. +++.+. |.-+...+..+ ++|.+.|
T Consensus 706 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G--~~~P~~~~~lv~~l~~~~~~~-i~~H~Hnd~GlAvAn~laAv-~aGa~~v 781 (1165)
T 2qf7_A 706 YDLKYYTNLAVELEKAGAHIIAVKDMAG--LLKPAAAKVLFKALREATGLP-IHFHTHDTSGIAAATVLAAV-EAGVDAV 781 (1165)
T ss_dssp GCHHHHHHHHHHHHHTTCSEEEEEETTC--CCCHHHHHHHHHHHHHHCSSC-EEEEECBTTSCHHHHHHHHH-HTTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCccC--CcCHHHHHHHHHHHHHhcCCe-EEEEECCCCCHHHHHHHHHH-HhCCCEE
Confidence 577888888888888888888884 22 33444 447777766644553 666543 33333344443 5688989
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhh
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 151 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~ 151 (298)
..|+.|..+- .|..+.+.++.+++. .|+ .. +.+.+.+.++.+++.+
T Consensus 782 d~ti~GlGe~-----~Gn~~le~vv~~L~~---~g~-~t--------gidl~~L~~~s~~~~~ 827 (1165)
T 2qf7_A 782 DAAMDALSGN-----TSQPCLGSIVEALSG---SER-DP--------GLDPAWIRRISFYWEA 827 (1165)
T ss_dssp EEBCGGGCSB-----TSCCBHHHHHHHHTT---STT-CC--------CCCHHHHHHHHHHHHH
T ss_pred EecccccCCC-----ccchhHHHHHHHHHh---cCC-Cc--------cccHHHHHHHHHHHHH
Confidence 9998886532 344446666666654 355 31 4677777777766654
No 186
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=50.81 E-value=48 Score=28.37 Aligned_cols=135 Identities=13% Similarity=0.126 Sum_probs=88.1
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEE--cCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-------------HhhHHH
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRL--TGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-------------ARKLPK 79 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~--tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-------------~~~~~~ 79 (298)
-+.+++.+++....+.| ..|.| |.| -||..=..+++.+++..+..-++|--|.+.+ ++.++.
T Consensus 26 ~t~~elr~~~~~~r~~g-~~IgfVPTMG--~LH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~l 102 (314)
T 3inn_A 26 HTIEELRQALAPARQQG-KKIGFVPTMG--YLHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPRDLERDAGL 102 (314)
T ss_dssp CSHHHHHHHHHHHHHTT-CCEEEEEECS--SCCHHHHHHHHHHHHHCSEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcC-CeEEEEcCCC--ccCHHHHHHHHHHHHhCCEEEEEECCChhhcCCCccccccCCCHHHHHHH
Confidence 47899999999888877 56777 866 4999888999988875443235666777653 345788
Q ss_pred HHHcCCCeEEEecCCCCHHhhh--------------hhc---CCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHH
Q 022377 80 LKESGLTSVNISLDTLVPAKFE--------------FLT---RRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEI 142 (298)
Q Consensus 80 l~~~~~~~v~iSldg~~~~~~~--------------~ir---~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i 142 (298)
+.+.|+|.| +.-+. ++.|- .+. +.+-|+-|..-+.+|...=-+.. ..+.. ....++
T Consensus 103 l~~~GvD~v-F~P~~--~emYP~g~~t~V~v~~l~~~LeG~~RPgHF~GV~TVV~KLfniv~Pd~---A~FGe-KD~QQl 175 (314)
T 3inn_A 103 LHDAQVDYL-FAPTV--SDMYPRPMQTVVDVPPLGNQIEGEARPGHFAGVATVVSKLFNIVGPDA---AYFGE-KDFQQL 175 (314)
T ss_dssp HHHTTCSEE-ECCCH--HHHCSSCCCCEEECHHHHSSTHHHHSTTHHHHHHHHHHHHHHHHCCSE---EEEET-TSHHHH
T ss_pred HHhCCCCEE-ECCCH--HHcCCCCCeeEEEcCCcccccCCCCCcchhhhHHHHHHHHHhccCCCE---EEECc-cHHHHH
Confidence 999999954 33221 12221 111 22348888887777776522121 23333 577888
Q ss_pred HHHHHHHhhCCCeeEEE
Q 022377 143 CDFVELTRDRPINIRFI 159 (298)
Q Consensus 143 ~~i~~~~~~~g~~~~~~ 159 (298)
.-+-+.+.++++++..+
T Consensus 176 ~vIrrmV~DL~~pVeIv 192 (314)
T 3inn_A 176 VIIRRMVDDMAIPVRIV 192 (314)
T ss_dssp HHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHcCCceEEE
Confidence 88888999988876544
No 187
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=50.54 E-value=56 Score=25.52 Aligned_cols=70 Identities=30% Similarity=0.257 Sum_probs=48.4
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccC--CCCcEEEEeCccchHhhHHHHHHcCCCeEEEe
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK--GLKTLAMTTNGLTLARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~--~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iS 91 (298)
..+.+++.++++.+.+.|+..|.++.+.| +..+.++.+++.. ++. +.+.|- ...+.++...+.|.+.| ++
T Consensus 18 ~~~~~~~~~~~~~~~~~G~~~iev~~~~~----~~~~~i~~ir~~~~~~~~-ig~~~v--~~~~~~~~a~~~Gad~i-v~ 89 (205)
T 1wa3_A 18 ANSVEEAKEKALAVFEGGVHLIEITFTVP----DADTVIKELSFLKEKGAI-IGAGTV--TSVEQCRKAVESGAEFI-VS 89 (205)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEETTST----THHHHHHHTHHHHHTTCE-EEEESC--CSHHHHHHHHHHTCSEE-EC
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCCh----hHHHHHHHHHHHCCCCcE-EEeccc--CCHHHHHHHHHcCCCEE-Ec
Confidence 46889999999999999999998886654 3445666666532 342 555331 12345677778899988 66
No 188
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=50.27 E-value=99 Score=24.92 Aligned_cols=112 Identities=15% Similarity=0.181 Sum_probs=64.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEc--CCc--cCccccHHHHHHHHhcc--CCCC-cEEEEeCccchHhhHHHHHHcCCCe
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLT--GGE--PTVRKDIEEACFHLSKL--KGLK-TLAMTTNGLTLARKLPKLKESGLTS 87 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~t--GGE--Pll~~~~~~ii~~~~~~--~~~~-~v~i~TNG~ll~~~~~~l~~~~~~~ 87 (298)
+++..+.+-++.+.+.|...+.+= -|- |-+... .++++.+++. ..+. .+.+-+|- ..+.++.+.++|.+.
T Consensus 14 ~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G-~~~v~~ir~~~~~~~~~dvhLmv~~--p~~~i~~~~~aGad~ 90 (228)
T 3ovp_A 14 SDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFG-HPVVESLRKQLGQDPFFDMHMMVSK--PEQWVKPMAVAGANQ 90 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBC-HHHHHHHHHHHCSSSCEEEEEECSC--GGGGHHHHHHHTCSE
T ss_pred CCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccC-HHHHHHHHHhhCCCCcEEEEEEeCC--HHHHHHHHHHcCCCE
Confidence 344556667777778887766663 232 444422 2344444443 1221 24444432 245788999999999
Q ss_pred EEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHH
Q 022377 88 VNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFV 146 (298)
Q Consensus 88 v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~ 146 (298)
|+|...+.+ ...+.++.++++|. .+.+ .+.++...+.++++.
T Consensus 91 itvH~Ea~~--------------~~~~~i~~i~~~G~-k~gv--al~p~t~~e~l~~~l 132 (228)
T 3ovp_A 91 YTFHLEATE--------------NPGALIKDIRENGM-KVGL--AIKPGTSVEYLAPWA 132 (228)
T ss_dssp EEEEGGGCS--------------CHHHHHHHHHHTTC-EEEE--EECTTSCGGGTGGGG
T ss_pred EEEccCCch--------------hHHHHHHHHHHcCC-CEEE--EEcCCCCHHHHHHHh
Confidence 999755421 24556677778888 6544 566644555554444
No 189
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=50.15 E-value=83 Score=27.43 Aligned_cols=83 Identities=13% Similarity=0.189 Sum_probs=52.9
Q ss_pred CCCCCCHHHHHHHHHHH-------HhCCCCEEEEcCCc---------cCcc-------------ccHH-HHHHHHhccCC
Q 022377 11 KPQLLSLNEILRLAYLF-------VTSGVDKIRLTGGE---------PTVR-------------KDIE-EACFHLSKLKG 60 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~-------~~~~~~~v~~tGGE---------Pll~-------------~~~~-~ii~~~~~~~~ 60 (298)
...+||.+++..+++.+ .+.|...|.+.+|- |..+ ..+. ++++.+++.-+
T Consensus 147 ~p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg 226 (365)
T 2gou_A 147 VPRAMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIG 226 (365)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHC
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcC
Confidence 45679999999888755 34688899997754 4321 2243 88888876422
Q ss_pred CCcEEE--EeCcc--------chH---hhHHHHHHcCCCeEEEecC
Q 022377 61 LKTLAM--TTNGL--------TLA---RKLPKLKESGLTSVNISLD 93 (298)
Q Consensus 61 ~~~v~i--~TNG~--------ll~---~~~~~l~~~~~~~v~iSld 93 (298)
-..+.+ ..++. -.+ +.++.+.+.|++.|.+|--
T Consensus 227 ~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~ 272 (365)
T 2gou_A 227 AERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEV 272 (365)
T ss_dssp GGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 102444 44331 122 3467888899999999853
No 190
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=49.79 E-value=1.1e+02 Score=26.91 Aligned_cols=141 Identities=11% Similarity=0.011 Sum_probs=82.1
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcC------CccCccc----------c-HHHHHHHHhcc--CCCCcEEEEeCccc
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTG------GEPTVRK----------D-IEEACFHLSKL--KGLKTLAMTTNGLT 72 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tG------GEPll~~----------~-~~~ii~~~~~~--~~~~~v~i~TNG~l 72 (298)
++.++.+++.+.+.++.+.|...|.+-. |-+++.+ + ..++++.+++. .++. +.+.-|+..
T Consensus 142 ~~~~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~-l~vDan~~~ 220 (403)
T 2ox4_A 142 KSKGRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVD-IIVENHGHT 220 (403)
T ss_dssp CCCCSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSE-EEEECTTCS
T ss_pred cccCCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCe-EEEECCCCC
Confidence 3457899998888888888988888763 5433322 2 34777777663 3564 889999876
Q ss_pred h-Hh---hHHHHHHcCCCeEEEecCCCCHHhhhhhcCC--------CcHHHHHHHHHHHHHcCCCCEEEEEEEec-CCCH
Q 022377 73 L-AR---KLPKLKESGLTSVNISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMR-GFND 139 (298)
Q Consensus 73 l-~~---~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~vi~~-~~n~ 139 (298)
. ++ .++.|.+.++.++.=.+...+-+.+..++.. .++.. .+.++.+.+.+...+ ++.-+.+ | -.
T Consensus 221 ~~~~ai~~~~~l~~~~i~~iE~P~~~~d~~~~~~l~~~~~iPIa~dE~~~~-~~~~~~~i~~~~~d~-v~ik~~~~G-Gi 297 (403)
T 2ox4_A 221 DLVSAIQFAKAIEEFNIFFYEEINTPLNPRLLKEAKKKIDIPLASGERIYS-RWGFLPFLEDRSIDV-IQPDLGTCG-GF 297 (403)
T ss_dssp CHHHHHHHHHHHGGGCEEEEECCSCTTSTHHHHHHHHTCCSCEEECTTCCH-HHHHHHHHHTTCCSE-ECCCHHHHT-HH
T ss_pred CHHHHHHHHHHHHhhCCCEEeCCCChhhHHHHHHHHHhCCCCEEecCCcCC-HHHHHHHHHcCCCCE-EecCccccC-CH
Confidence 4 33 3455666677766644443333445454421 12222 445566666553121 1221111 1 24
Q ss_pred hHHHHHHHHHhhCCCee
Q 022377 140 DEICDFVELTRDRPINI 156 (298)
Q Consensus 140 ~~i~~i~~~~~~~g~~~ 156 (298)
.+..++++++...|+.+
T Consensus 298 te~~~i~~~A~~~g~~~ 314 (403)
T 2ox4_A 298 TEFKKIADMAHIFEVTV 314 (403)
T ss_dssp HHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHcCCEE
Confidence 56788888888888753
No 191
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=49.63 E-value=1e+02 Score=27.33 Aligned_cols=65 Identities=22% Similarity=0.299 Sum_probs=42.7
Q ss_pred HHHHHHHhCCCCEEEE--cCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEec
Q 022377 22 RLAYLFVTSGVDKIRL--TGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISL 92 (298)
Q Consensus 22 ~~i~~~~~~~~~~v~~--tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSl 92 (298)
..++.+.+.|+..|.| +-|.| ..+.++++.+++..++. +.+ .|. ...+.++.+.++|.|.|.++.
T Consensus 147 e~~~~lveaGvdvIvldta~G~~---~~~~e~I~~ik~~~~i~-Vi~-g~V-~t~e~A~~a~~aGAD~I~vG~ 213 (400)
T 3ffs_A 147 ERAKLLVEAGVDVIVLDSAHGHS---LNIIRTLKEIKSKMNID-VIV-GNV-VTEEATKELIENGADGIKVGI 213 (400)
T ss_dssp HHHHHHHHHTCSEEEECCSCCSB---HHHHHHHHHHHTTCCCE-EEE-EEE-CSHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEEeCCCCCc---ccHHHHHHHHHhcCCCe-EEE-eec-CCHHHHHHHHHcCCCEEEEeC
Confidence 3455556678888887 34533 34678888888744653 433 222 235678888999999999854
No 192
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=49.50 E-value=89 Score=27.86 Aligned_cols=118 Identities=8% Similarity=0.103 Sum_probs=74.9
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCC-CCcEEEEeCccch-HhhHHHHHHcC-CCeE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKG-LKTLAMTTNGLTL-ARKLPKLKESG-LTSV 88 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~-~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v 88 (298)
+.-.+.++..++++.+.++++..|- ||+-..+ .+-.+.+++..+ + -|.+.+.+. .+.++++.+.+ .+.|
T Consensus 237 n~~~~~~eai~~~~~L~~~~i~~iE----qP~~~~d-~~~~~~l~~~~~~i---PIa~dE~~~~~~~~~~~i~~~~~d~v 308 (428)
T 3bjs_A 237 NTAYTMADARRVLPVLAEIQAGWLE----EPFACND-FASYREVAKITPLV---PIAAGENHYTRFEFGQMLDAGAVQVW 308 (428)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCSCEE----CCSCTTC-HHHHHHHTTTCSSS---CEEECTTCCSHHHHHHHHTTCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE----CCCCccC-HHHHHHHHHhCCCC---cEEcCCCcCCHHHHHHHHHhCCCCEE
Confidence 3457889999999999888877664 7874434 344445554334 4 466777665 45677777654 4444
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCC
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRP 153 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g 153 (298)
++.+. ..+++..+++.++.+.++|+ .+.+. +. .+.-.+...+.++...+
T Consensus 309 ~ik~~-----------~~GGitea~~ia~~A~~~gi-~~~~~---~~-es~i~~~a~~hlaaa~~ 357 (428)
T 3bjs_A 309 QPDLS-----------KCGGITEGIRIAAMASAYRI-PINAH---SS-ATGLNHAATIHFLAATE 357 (428)
T ss_dssp CCBTT-----------TSSCHHHHHHHHHHHHHTTC-CBCCB---CC-SSHHHHHHHHHHHHHCT
T ss_pred EeCcc-----------ccCCHHHHHHHHHHHHHcCC-eEEec---CC-CcHHHHHHHHHHHHhCC
Confidence 43321 24678999999999999999 65444 11 23334555566665544
No 193
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=49.41 E-value=68 Score=27.89 Aligned_cols=94 Identities=17% Similarity=0.169 Sum_probs=62.1
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++ .++++.+.++++..|- ||+-..++. -.+.+++..++ -|.++..+. .+.++++.+.+ .+.|++
T Consensus 198 ~~~~~~~-~~~~~~l~~~~i~~iE----qP~~~~d~~-~~~~l~~~~~i---pIa~dE~~~~~~~~~~~i~~~~~d~v~i 268 (375)
T 1r0m_A 198 SAYTLAD-AGRLRQLDEYDLTYIE----QPLAWDDLV-DHAELARRIRT---PLCLDESVASASDARKALALGAGGVINL 268 (375)
T ss_dssp TCCCGGG-HHHHHTTGGGCCSCEE----CCSCTTCSH-HHHHHHHHCSS---CEEESTTCCSHHHHHHHHHHTSCSEEEE
T ss_pred CCCCHHH-HHHHHHHHhCCCcEEE----CCCCcccHH-HHHHHHHhCCC---CEEecCccCCHHHHHHHHHhCCCCEEEE
Confidence 3456777 8888888888877776 888543433 33444443344 466777655 34566666544 787777
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
.+. ..+++..+++.++.+.++|+ ++
T Consensus 269 k~~-----------~~GGit~~~~i~~~A~~~g~-~~ 293 (375)
T 1r0m_A 269 KVA-----------RVGGHAESRRVHDVAQSFGA-PV 293 (375)
T ss_dssp CTT-----------TTTSHHHHHHHHHHHHHTTC-CE
T ss_pred Ccc-----------hhcCHHHHHHHHHHHHHcCC-cE
Confidence 542 23678899999999999999 65
No 194
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=49.40 E-value=1.3e+02 Score=26.00 Aligned_cols=98 Identities=14% Similarity=0.126 Sum_probs=65.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++..++++.+.++++..+- ||+-..++ +-.+.+++..+ +-|.+++.+. .+.++++.+.+ .+.|++
T Consensus 197 ~~~~~~~a~~~~~~l~~~~i~~iE----qP~~~~~~-~~~~~l~~~~~---ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 268 (370)
T 1nu5_A 197 QGWDEQTASIWIPRLEEAGVELVE----QPVPRANF-GALRRLTEQNG---VAILADESLSSLSSAFELARDHAVDAFSL 268 (370)
T ss_dssp TCCCHHHHHHHHHHHHHHTCCEEE----CCSCTTCH-HHHHHHHHHCS---SEEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCCCHHHHHHHHHHHHhcCcceEe----CCCCcccH-HHHHHHHHhCC---CCEEeCCCCCCHHHHHHHHHhCCCCEEEE
Confidence 346788888888888888877665 78744343 34444544323 5577888765 35667776654 777776
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 130 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 130 (298)
.+. ..+++...++.++.+.++|+ ++.+.
T Consensus 269 k~~-----------~~GGit~~~~i~~~A~~~g~-~~~~~ 296 (370)
T 1nu5_A 269 KLC-----------NMGGIANTLKVAAVAEAAGI-SSYGG 296 (370)
T ss_dssp CHH-----------HHTSHHHHHHHHHHHHHHTC-EEEEC
T ss_pred chh-----------hcCCHHHHHHHHHHHHHcCC-cEEec
Confidence 531 12568889999999999999 65433
No 195
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=49.40 E-value=25 Score=29.02 Aligned_cols=54 Identities=13% Similarity=-0.002 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch
Q 022377 18 NEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 73 (298)
Q Consensus 18 e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll 73 (298)
+++.+.+.+..+.|-..+.+++|+|+++.-...+++.+.+. ++. +.+.-.-+.+
T Consensus 83 ~~~~~~i~~~~~~g~~Va~l~~GDP~~~~~~~~l~~~l~~~-gi~-v~viPGiSs~ 136 (259)
T 2e0n_A 83 AANYASMAEEVQAGRRVAVVSVGDGGFYSTASAIIERARRD-GLD-CSMTPGIPAF 136 (259)
T ss_dssp GGGHHHHHHHHHTTCEEEEEESBCTTBSCTHHHHHHHHHTT-TCC-EEEECCCCHH
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCCcccccHHHHHHHHHHC-CCC-EEEeCChhHH
Confidence 34434343334456456667899999998888999999884 885 8887665544
No 196
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=49.01 E-value=1.4e+02 Score=26.17 Aligned_cols=99 Identities=14% Similarity=0.099 Sum_probs=64.2
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++..++++.+.++++..+- ||+-..++ +..+.+++..++ -|.+++.+. .+.++++.+.+ .+.|++
T Consensus 203 ~~~~~~~a~~~~~~l~~~~i~~iE----qP~~~~d~-~~~~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~~~d~v~i 274 (391)
T 2qgy_A 203 VPEDLDQTKSFLKEVSSFNPYWIE----EPVDGENI-SLLTEIKNTFNM---KVVTGEKQSGLVHFRELISRNAADIFNP 274 (391)
T ss_dssp CCSCHHHHHHHHHHHGGGCCSEEE----CSSCTTCH-HHHHHHHHHCSS---CEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCCCHHHHHHHHHHHHhcCCCeEe----CCCChhhH-HHHHHHHhhCCC---CEEEcCCcCCHHHHHHHHHcCCCCEEEE
Confidence 446788888888888888877664 67654343 334444443344 466777665 45667776655 565555
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNC 131 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~ 131 (298)
.+. ..+++..+++.++.+.++|+ ++.+.+
T Consensus 275 k~~-----------~~GGit~~~~i~~~A~~~gi-~~~~~~ 303 (391)
T 2qgy_A 275 DIS-----------GMGGLIDIIEISNEASNNGI-FISPHC 303 (391)
T ss_dssp BTT-----------TSSCHHHHHHHHHHHHHTTC-EECCBC
T ss_pred Ccc-----------hhCCHHHHHHHHHHHHHCCC-EEeccC
Confidence 432 23578899999999999999 654443
No 197
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=49.00 E-value=44 Score=29.09 Aligned_cols=117 Identities=14% Similarity=0.085 Sum_probs=68.8
Q ss_pred CCCHHHHH-HHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 14 LLSLNEIL-RLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 14 ~l~~e~~~-~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
-.+.++.. ++++.+.++++..+. ||+-..+ .+..+.+++..++ -|.+++.+. .+.++++.+.+ .+.|++
T Consensus 195 ~~~~~~a~~~~~~~l~~~~i~~iE----qP~~~~d-~~~~~~l~~~~~i---PI~~dE~~~~~~~~~~~i~~~~~d~v~i 266 (369)
T 2p8b_A 195 GWKNSANTLTALRSLGHLNIDWIE----QPVIADD-IDAMAHIRSKTDL---PLMIDEGLKSSREMRQIIKLEAADKVNI 266 (369)
T ss_dssp TTBSHHHHHHHHHTSTTSCCSCEE----CCBCTTC-HHHHHHHHHTCCS---CEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCCcEEE----CCCCccc-HHHHHHHHHhCCC---CEEeCCCCCCHHHHHHHHHhCCCCEEEe
Confidence 35667777 777777777766654 7874333 3444445543343 466777665 34566655544 676666
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCC
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRP 153 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g 153 (298)
.+. ..+++...++.++.+.++|+ ++.+.+. ..+.-.+...+.++...+
T Consensus 267 k~~-----------~~GGit~~~~i~~~A~~~g~-~~~~~~~---~es~i~~~a~~~laa~~~ 314 (369)
T 2p8b_A 267 KLM-----------KCGGIYPAVKLAHQAEMAGI-ECQVGSM---VESSVASSAGFHVAFSKK 314 (369)
T ss_dssp CHH-----------HHTSHHHHHHHHHHHHHTTC-EEEECCS---SCCHHHHHHHHHHHTTCT
T ss_pred ecc-----------hhCCHHHHHHHHHHHHHcCC-cEEecCC---CccHHHHHHHHHHHHcCC
Confidence 531 12568888999999999999 6544332 123333444555555443
No 198
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=48.77 E-value=27 Score=31.61 Aligned_cols=59 Identities=19% Similarity=0.235 Sum_probs=43.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 73 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll 73 (298)
..++.+++.+.+-+..+.|-..+.+.+|.|+++.-..++++.+.+. ++. +.+.-.-+..
T Consensus 275 ~~~~~~~i~~~l~~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~-gi~-v~vvPGiSs~ 333 (457)
T 1pjq_A 275 HCVPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCHA-GIP-FSVVPGITAA 333 (457)
T ss_dssp CCCTTHHHHHHHHHHHHTTCEEEEEESBCTTTSSSHHHHHTTTTTT-TCC-EEEECCCCHH
T ss_pred cCCCHHHHHHHHHHHHHCCCcEEEEeCCCCCccCCHHHHHHHHHHC-CCC-EEEeCCHhHH
Confidence 3466778777665556666556667899999998888889988884 885 8887655433
No 199
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=48.58 E-value=93 Score=24.16 Aligned_cols=96 Identities=21% Similarity=0.131 Sum_probs=59.5
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccC-CCCcEEE---EeCccchHhhHHHHHHcCCCeEE
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK-GLKTLAM---TTNGLTLARKLPKLKESGLTSVN 89 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~-~~~~v~i---~TNG~ll~~~~~~l~~~~~~~v~ 89 (298)
..+.++..++++.+.. ++..+.+ |.|+...+-.++++.+++.. +.. +-+ ..| ..+..++.+.++|.+.|.
T Consensus 9 ~~~~~~~~~~~~~~~~-~v~~iev--~~~~~~~~g~~~i~~l~~~~~~~~-i~~~l~~~d--i~~~~~~~a~~~Gad~v~ 82 (207)
T 3ajx_A 9 LLSTEAALELAGKVAE-YVDIIEL--GTPLIKAEGLSVITAVKKAHPDKI-VFADMKTMD--AGELEADIAFKAGADLVT 82 (207)
T ss_dssp CSCHHHHHHHHHHHGG-GCSEEEE--CHHHHHHHCTHHHHHHHHHSTTSE-EEEEEEECS--CHHHHHHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHHhhc-cCCEEEE--CcHHHHhhCHHHHHHHHHhCCCCe-EEEEEEecC--ccHHHHHHHHhCCCCEEE
Confidence 3578899999998877 7777777 66654333345666666643 442 332 233 123457888999999999
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
++.... ++ .+-+.++.++++|. .+.+
T Consensus 83 vh~~~~-~~------------~~~~~~~~~~~~g~-~~gv 108 (207)
T 3ajx_A 83 VLGSAD-DS------------TIAGAVKAAQAHNK-GVVV 108 (207)
T ss_dssp EETTSC-HH------------HHHHHHHHHHHHTC-EEEE
T ss_pred EeccCC-hH------------HHHHHHHHHHHcCC-ceEE
Confidence 886552 22 22244555666788 5533
No 200
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=48.27 E-value=34 Score=22.55 Aligned_cols=50 Identities=22% Similarity=0.337 Sum_probs=22.4
Q ss_pred ccccHHHHHHHHhccCCCCcEEEEeCccchH--hh-----HHHHHHcCCCeEEEecCC
Q 022377 44 VRKDIEEACFHLSKLKGLKTLAMTTNGLTLA--RK-----LPKLKESGLTSVNISLDT 94 (298)
Q Consensus 44 l~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~--~~-----~~~l~~~~~~~v~iSldg 94 (298)
|.+-+-++++|+++. |.+++.|+-.+..-. +. +.-+.+.|...|++.+||
T Consensus 29 lqkvlnelmdyikkq-gakrvrisitartkkeaekfaailikvfaelgyndinvtfdg 85 (106)
T 1qys_A 29 LQKVLNELMDYIKKQ-GAKRVRISITARTKKEAEKFAAILIKVFAELGYNDINVTFDG 85 (106)
T ss_dssp HHHHHHHHHHHHHHH-CCSEEEEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred HHHHHHHHHHHHHhc-CCcEEEEEEEecchhHHHHHHHHHHHHHHHhCCcceeEEEcC
Confidence 333344566666553 433344433332211 11 233344555556666665
No 201
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=48.12 E-value=1.8e+02 Score=29.66 Aligned_cols=117 Identities=12% Similarity=0.155 Sum_probs=76.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc--CCccCcccc-HHHHHHHHhccCCCCcEEEEeC---ccchHhhHHHHHHcCCCe
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLT--GGEPTVRKD-IEEACFHLSKLKGLKTLAMTTN---GLTLARKLPKLKESGLTS 87 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~t--GGEPll~~~-~~~ii~~~~~~~~~~~v~i~TN---G~ll~~~~~~l~~~~~~~ 87 (298)
.-+.+.+.++++++.+.|+..|+|. -| ++.|. +.++++.+++..++. +.+.|. |.-+...+.. .++|.+.
T Consensus 688 ~~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G--~~~P~~~~~lv~~l~~~~~~~-i~~H~Hnt~G~a~An~laA-~~aGa~~ 763 (1150)
T 3hbl_A 688 IYTLEYYVKLAKELEREGFHILAIKDMAG--LLKPKAAYELIGELKSAVDLP-IHLHTHDTSGNGLLTYKQA-IDAGVDI 763 (1150)
T ss_dssp SSSHHHHHHHHHHHHHTTCSEEEEEETTC--CCCHHHHHHHHHHHHHHCCSC-EEEEECBTTSCHHHHHHHH-HHTTCSE
T ss_pred CCCHHHHHHHHHHHHHcCCCeeeEcCccC--CCCHHHHHHHHHHHHHhcCCe-EEEEeCCCCcHHHHHHHHH-HHhCCCE
Confidence 3678889999999999999999994 22 34444 557777777655664 777654 3333333444 4679999
Q ss_pred EEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhh
Q 022377 88 VNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRD 151 (298)
Q Consensus 88 v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~ 151 (298)
|..|+.|...- .+..+.+.++.+++. .|+ . .|.+.+.+.++.+++.+
T Consensus 764 vD~ai~GlG~~-----~gn~~lE~lv~~L~~---~g~-~--------tgidl~~l~~~~~~~~~ 810 (1150)
T 3hbl_A 764 IDTAVASMSGL-----TSQPSANSLYYALNG---FPR-H--------LRTDIEGMESLSHYWST 810 (1150)
T ss_dssp EEEBCGGGCSB-----TSCCBHHHHHHHTTT---SSC-C--------BCSCHHHHHHHHHHHHH
T ss_pred EEEeccccCCC-----CCCccHHHHHHHHHh---cCC-C--------cCccHHHHHHHHHHHHH
Confidence 99999997532 233346666555543 355 3 24677777777766654
No 202
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=48.06 E-value=66 Score=26.39 Aligned_cols=78 Identities=15% Similarity=0.199 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEc-CCccCccc--------cHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCC
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLT-GGEPTVRK--------DIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLT 86 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~t-GGEPll~~--------~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~ 86 (298)
+.+.+.+.++.+..+|+..|.+. |--|--.. .+.++++++++ .|+. +.+.+-.....+..+.+...+-.
T Consensus 100 ~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~-l~lE~~~~~~~~~~~l~~~~~~~ 177 (290)
T 3tva_A 100 RVAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAAN-HGQA-VHLETGQESADHLLEFIEDVNRP 177 (290)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHT-TTCE-EEEECCSSCHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHH-cCCE-EEEecCCCCHHHHHHHHHhcCCC
Confidence 45778888999999999999986 43342211 14466666666 4985 88887653334444444444556
Q ss_pred eEEEecCCC
Q 022377 87 SVNISLDTL 95 (298)
Q Consensus 87 ~v~iSldg~ 95 (298)
.+.+-+|..
T Consensus 178 ~~g~~~D~~ 186 (290)
T 3tva_A 178 NLGINFDPA 186 (290)
T ss_dssp TEEEEECHH
T ss_pred CEEEEeccH
Confidence 788998874
No 203
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=47.90 E-value=1.4e+02 Score=26.11 Aligned_cols=140 Identities=13% Similarity=0.088 Sum_probs=82.6
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcC------CccCccc----------c-HHHHHHHHhcc--CCCCcEEEEeCccc
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTG------GEPTVRK----------D-IEEACFHLSKL--KGLKTLAMTTNGLT 72 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tG------GEPll~~----------~-~~~ii~~~~~~--~~~~~v~i~TNG~l 72 (298)
++..+.+++.+.+.++.+.|...|.+-. |.+++.| + ..++++.+++. .++ .+.+.-|+..
T Consensus 148 ~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~-~l~vDan~~~ 226 (407)
T 2o56_A 148 DMLTEPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDV-DIIAEMHAFT 226 (407)
T ss_dssp CCCCSHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTS-EEEEECTTCS
T ss_pred cccCCHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCC-EEEEECCCCC
Confidence 3456899998888888888988888753 5433321 3 34777777763 356 4889999865
Q ss_pred h-Hh---hHHHHHHcCCCeEEEecCCCCHHhhhhhcC--------CCcHHHHHHHHHHHHHcCCCCEEEEEEEec-CCCH
Q 022377 73 L-AR---KLPKLKESGLTSVNISLDTLVPAKFEFLTR--------RKGHEKVMESINAAIEVGYNPVKVNCVVMR-GFND 139 (298)
Q Consensus 73 l-~~---~~~~l~~~~~~~v~iSldg~~~~~~~~ir~--------~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~-~~n~ 139 (298)
. ++ .++.|.+.++.++.=.+...+.+.+..++. ..++. ..+.++.+.+.+...+ ++.-+.+ | -.
T Consensus 227 ~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~~~~d~-v~ik~~~~G-Gi 303 (407)
T 2o56_A 227 DTTSAIQFGRMIEELGIFYYEEPVMPLNPAQMKQVADKVNIPLAAGERIY-WRWGYRPFLENGSLSV-IQPDICTCG-GI 303 (407)
T ss_dssp CHHHHHHHHHHHGGGCCSCEECSSCSSSHHHHHHHHHHCCSCEEECTTCC-HHHHHHHHHHTTCCSE-ECCCTTTTT-HH
T ss_pred CHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHHhCCCCEEeCCCcC-CHHHHHHHHHcCCCCE-EecCccccC-CH
Confidence 4 33 356666678887775555444455555442 11221 2344555555543121 2221221 1 25
Q ss_pred hHHHHHHHHHhhCCCe
Q 022377 140 DEICDFVELTRDRPIN 155 (298)
Q Consensus 140 ~~i~~i~~~~~~~g~~ 155 (298)
.+..++++++...|+.
T Consensus 304 te~~~i~~~A~~~g~~ 319 (407)
T 2o56_A 304 TEVKKICDMAHVYDKT 319 (407)
T ss_dssp HHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHHHHHcCCe
Confidence 6677888888888875
No 204
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=47.25 E-value=64 Score=27.03 Aligned_cols=75 Identities=9% Similarity=0.113 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHHh-CCCCEEEEcCCccCc---------cccH-HHHHHHHhccCCCCcEEEEeCc--cchHhhHHHHHH
Q 022377 16 SLNEILRLAYLFVT-SGVDKIRLTGGEPTV---------RKDI-EEACFHLSKLKGLKTLAMTTNG--LTLARKLPKLKE 82 (298)
Q Consensus 16 ~~e~~~~~i~~~~~-~~~~~v~~tGGEPll---------~~~~-~~ii~~~~~~~~~~~v~i~TNG--~ll~~~~~~l~~ 82 (298)
+.+++.+..+.+.+ .|...|.+.-+-|.. ++++ .++++.+++..++. +.+-... .-..+.++.+.+
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~p-v~vk~~~~~~~~~~~a~~l~~ 187 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVP-LYVKLSPNVTDIVPIAKAVEA 187 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSC-EEEEECSCSSCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCC-EEEEECCChHHHHHHHHHHHH
Confidence 57888888888776 777767665444432 3343 58888888743654 5544332 223456788889
Q ss_pred cCCCeEEEe
Q 022377 83 SGLTSVNIS 91 (298)
Q Consensus 83 ~~~~~v~iS 91 (298)
+|++.|.++
T Consensus 188 ~G~d~i~v~ 196 (311)
T 1ep3_A 188 AGADGLTMI 196 (311)
T ss_dssp TTCSEEEEC
T ss_pred cCCCEEEEe
Confidence 999999885
No 205
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=47.20 E-value=1.3e+02 Score=25.98 Aligned_cols=118 Identities=12% Similarity=0.139 Sum_probs=74.2
Q ss_pred CCCCHHHHHHHHHHHHh--CCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHc-CCCeE
Q 022377 13 QLLSLNEILRLAYLFVT--SGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKES-GLTSV 88 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~--~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~-~~~~v 88 (298)
.-.+.++..++++.+.+ +++..|- ||+-..++ +-.+.+++..++ -|.++..+. .+.++++.+. ..+.|
T Consensus 194 ~~~~~~~a~~~~~~l~~~~~~i~~iE----qP~~~~d~-~~~~~l~~~~~i---pIa~dE~~~~~~~~~~~i~~~~~d~v 265 (366)
T 1tkk_A 194 QGWRPKEAVTAIRKMEDAGLGIELVE----QPVHKDDL-AGLKKVTDATDT---PIMADESVFTPRQAFEVLQTRSADLI 265 (366)
T ss_dssp TCSCHHHHHHHHHHHHHTTCCEEEEE----CCSCTTCH-HHHHHHHHHCSS---CEEECTTCCSHHHHHHHHHHTCCSEE
T ss_pred CCCCHHHHHHHHHHHhhcCCCceEEE----CCCCcccH-HHHHHHHhhCCC---CEEEcCCCCCHHHHHHHHHhCCCCEE
Confidence 45688999999999988 7755553 78743344 344445443344 466777665 3456666554 47777
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCC
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRP 153 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g 153 (298)
++.+. ..+++..+++.++.+.++|+ ++.+.+.. .+.-.+...+.++...+
T Consensus 266 ~ik~~-----------~~GGit~~~~i~~~A~~~g~-~~~~~~~~---es~i~~~a~~~laaa~~ 315 (366)
T 1tkk_A 266 NIKLM-----------KAGGISGAEKINAMAEACGV-ECMVGSMI---ETKLGITAAAHFAASKR 315 (366)
T ss_dssp EECHH-----------HHTSHHHHHHHHHHHHHHTC-CEEECCSS---CCHHHHHHHHHHHHHCT
T ss_pred Eeehh-----------hhcCHHHHHHHHHHHHHcCC-cEEecCcc---ccHHHHHHHHHHHHcCC
Confidence 77542 13568899999999999999 76554421 23334455566665554
No 206
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=47.14 E-value=1.1e+02 Score=25.79 Aligned_cols=25 Identities=8% Similarity=0.021 Sum_probs=15.2
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcC
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTG 39 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tG 39 (298)
++.+++.++.+.+.+.|+..|.+++
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~ 193 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVN 193 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecC
Confidence 3556666666666666666665543
No 207
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=46.85 E-value=52 Score=24.96 Aligned_cols=70 Identities=17% Similarity=0.167 Sum_probs=31.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCC
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLT 86 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~ 86 (298)
...+.+++.+.+ .+.++.-|.+|.=-....+.+.++++.+++. +...+.+.--|...++..+.+.+.|++
T Consensus 54 ~~~p~e~lv~aa---~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~-g~~~i~v~vGG~~~~~~~~~l~~~G~d 123 (161)
T 2yxb_A 54 LRQTPEQVAMAA---VQEDVDVIGVSILNGAHLHLMKRLMAKLREL-GADDIPVVLGGTIPIPDLEPLRSLGIR 123 (161)
T ss_dssp SBCCHHHHHHHH---HHTTCSEEEEEESSSCHHHHHHHHHHHHHHT-TCTTSCEEEEECCCHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHH---HhcCCCEEEEEeechhhHHHHHHHHHHHHhc-CCCCCEEEEeCCCchhcHHHHHHCCCc
Confidence 345555553333 3444555555532222223344555555552 321133333454444445555566666
No 208
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=46.84 E-value=1.3e+02 Score=25.33 Aligned_cols=163 Identities=13% Similarity=0.071 Sum_probs=96.1
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEE-EEc-CCccC-cccc-HHHHHHHHhc--cCCCCcEEEEeC-ccchHhhHHHHHHcCC
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKI-RLT-GGEPT-VRKD-IEEACFHLSK--LKGLKTLAMTTN-GLTLARKLPKLKESGL 85 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v-~~t-GGEPl-l~~~-~~~ii~~~~~--~~~~~~v~i~TN-G~ll~~~~~~l~~~~~ 85 (298)
+-.+.|.+..+++.+.+.+.+.| .++ |+-.+ ...+ +..++..+.+ ..++. |.+.+. |. --+.+.+..++|+
T Consensus 27 Nv~n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VP-ValHlDHg~-~~e~i~~ai~~GF 104 (288)
T 3q94_A 27 NMNNLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVP-VAIHLDHGS-SFEKCKEAIDAGF 104 (288)
T ss_dssp ECCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSC-EEEEEEEEC-SHHHHHHHHHHTC
T ss_pred eeCCHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCCCCc-EEEECCCCC-CHHHHHHHHHcCC
Confidence 34678999999999998875543 355 33333 2333 3466665544 45775 887665 43 2356677778899
Q ss_pred CeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCC---------CHhHHHHHHHHHhhCCCee
Q 022377 86 TSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGF---------NDDEICDFVELTRDRPINI 156 (298)
Q Consensus 86 ~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~---------n~~~i~~i~~~~~~~g~~~ 156 (298)
.+|.+.--..+-+ .+...+.+-++.++..|+ .|+...=..-|. ...+.++..+|+.+.|++.
T Consensus 105 tSVMiDgS~~p~e--------eNi~~Tk~vv~~ah~~gv-sVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~ 175 (288)
T 3q94_A 105 TSVMIDASHHPFE--------ENVETTKKVVEYAHARNV-SVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDC 175 (288)
T ss_dssp SEEEECCTTSCHH--------HHHHHHHHHHHHHHTTTC-EEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSE
T ss_pred CeEEEeCCCCCHH--------HHHHHHHHHHHHHHHcCC-eEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCE
Confidence 9888754433222 135566677777777888 777665222222 1345788999999999875
Q ss_pred EEEeeecCCCCCCcccCCCCHHHHHHHHHHhC
Q 022377 157 RFIEFMPFDGNVWNVKKLVPYAEMLDTVVKKF 188 (298)
Q Consensus 157 ~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~ 188 (298)
--+.+-...+. +...+.+.++. ++.|.+..
T Consensus 176 LAvaiGt~HG~-Y~~~p~Ld~~~-L~~I~~~v 205 (288)
T 3q94_A 176 LAPALGSVHGP-YKGEPNLGFAE-MEQVRDFT 205 (288)
T ss_dssp EEECSSCBSSC-CSSSCCCCHHH-HHHHHHHH
T ss_pred EEEEcCcccCC-cCCCCccCHHH-HHHHHHhc
Confidence 44433322221 22234465543 45555543
No 209
>3do6_A Formate--tetrahydrofolate ligase; TM1766, putative formyltetrahydrofolate synthetase, structural genomics; HET: MSE; 1.85A {Thermotoga maritima} SCOP: c.37.1.0
Probab=46.38 E-value=72 Score=29.21 Aligned_cols=50 Identities=12% Similarity=0.108 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCeeEEE
Q 022377 109 HEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIRFI 159 (298)
Q Consensus 109 ~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~~~~~ 159 (298)
+....+-|+.++++|+ ++.+-+--.+..+..|++.+.+++.+.|+.+...
T Consensus 346 ~~NL~kHIen~~~fGv-pvVVaiN~F~tDT~aEi~~v~~~~~~~G~~~~~s 395 (543)
T 3do6_A 346 FKNLRVHVENLRKFNL-PVVVALNRFSTDTEKEIAYVVKECEKLGVRVAVS 395 (543)
T ss_dssp HHHHHHHHHHHHHTTC-CEEEEEECCTTCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCC-CeEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 4555566677778999 8776665555557889999999999999976443
No 210
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=46.21 E-value=1.3e+02 Score=25.28 Aligned_cols=112 Identities=13% Similarity=0.044 Sum_probs=60.4
Q ss_pred CCCCHHHHHHHHHHHHhC-CCCEEEEcCCccCccccHHHHHHHHhccCCCCcEE-EEeCcc--------ch---------
Q 022377 13 QLLSLNEILRLAYLFVTS-GVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLA-MTTNGL--------TL--------- 73 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~-~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~-i~TNG~--------ll--------- 73 (298)
..+++++. ++.+.+. |...|.+....+. ..+..++-+.+++. |+. +. +.++.. +.
T Consensus 31 ~~~~~~e~---l~~aa~~~G~~~VEl~~~~~~-~~~~~~l~~~l~~~-Gl~-i~~~~~~~~~~~~~~g~l~~~d~~~r~~ 104 (333)
T 3ktc_A 31 PALSTIDQ---INAAKEVGELSYVDLPYPFTP-GVTLSEVKDALKDA-GLK-AIGITPEIYLQKWSRGAFTNPDPAARAA 104 (333)
T ss_dssp CCCCHHHH---HHHHHHHSSEEEEEEEESCST-TCCHHHHHHHHHHH-TCE-EEEEEECTTSGGGTTCSTTCSSHHHHHH
T ss_pred CCCCHHHH---HHHHHHhCCCCEEEecCCCcc-hhHHHHHHHHHHHc-CCe-EEEEecCcCcccccCCCCCCcCHHHHHH
Confidence 35666665 5555566 8888888644333 34566777777775 886 54 555421 11
Q ss_pred -----HhhHHHHHHcCCCeEEEecCCCCHHhhhh-hcCCCcHHHHHHHHHHHHHcCCCCEEEEEE
Q 022377 74 -----ARKLPKLKESGLTSVNISLDTLVPAKFEF-LTRRKGHEKVMESINAAIEVGYNPVKVNCV 132 (298)
Q Consensus 74 -----~~~~~~l~~~~~~~v~iSldg~~~~~~~~-ir~~~~~~~v~~~i~~l~~~g~~~v~i~~v 132 (298)
.+.++...+.|...|.+..- .+...+.. ......++++.+.++.+.+.-- .+.+...
T Consensus 105 ~i~~~~~~i~~A~~LGa~~vv~~~g-~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~-~~~i~lE 167 (333)
T 3ktc_A 105 AFELMHESAGIVRELGANYVKVWPG-QDGWDYPFQVSHKNLWKLAVDGMRDLAGANP-DVKFAIE 167 (333)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCT-TCEESSTTSSCHHHHHHHHHHHHHHHHHTCT-TSEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCEEEECCC-CCCcCCCCcCCHHHHHHHHHHHHHHHHHHhh-cCCEEEE
Confidence 11233444558887766431 11000000 0011237888889998888643 4444444
No 211
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=46.13 E-value=1e+02 Score=27.13 Aligned_cols=66 Identities=14% Similarity=0.134 Sum_probs=40.0
Q ss_pred HHHHHHhC-CCCEEEEc-----CCccCccccHHHHHHHHhccCCCCcEEEEe-Cccc----------------hHhhHHH
Q 022377 23 LAYLFVTS-GVDKIRLT-----GGEPTVRKDIEEACFHLSKLKGLKTLAMTT-NGLT----------------LARKLPK 79 (298)
Q Consensus 23 ~i~~~~~~-~~~~v~~t-----GGEPll~~~~~~ii~~~~~~~~~~~v~i~T-NG~l----------------l~~~~~~ 79 (298)
.++++++. |+..|.+. .|++.-..++.++-+.+.+ .|+. ++..+ +... +.+.++.
T Consensus 35 ~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~-~GL~-i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i~~ 112 (386)
T 3bdk_A 35 TLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEE-AGLE-ITVIESIPVHEDIKQGKPNRDALIENYKTSIRN 112 (386)
T ss_dssp CHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHT-TTCE-EEEEECCCCCHHHHTTCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHH-cCCE-EEEEeccccccccccCcHHHHHHHHHHHHHHHH
Confidence 45667788 88888876 2444433456677777777 4985 65443 2211 1123566
Q ss_pred HHHcCCCeEEE
Q 022377 80 LKESGLTSVNI 90 (298)
Q Consensus 80 l~~~~~~~v~i 90 (298)
+.+.|+..|..
T Consensus 113 aa~lGi~~v~~ 123 (386)
T 3bdk_A 113 VGAAGIPVVCY 123 (386)
T ss_dssp HHTTTCCEEEE
T ss_pred HHHcCCCEEEE
Confidence 66678887765
No 212
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=45.58 E-value=1.4e+02 Score=27.25 Aligned_cols=118 Identities=14% Similarity=0.117 Sum_probs=64.6
Q ss_pred HHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccC-CCCcEEEEeCccchHhhHHHHHHcCCCeEEEecCCCCHHh
Q 022377 21 LRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK-GLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAK 99 (298)
Q Consensus 21 ~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~-~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSldg~~~~~ 99 (298)
...++.+.+.|+..|.+...-+. .+.+.++++.+++.. ++. +.. .|. ...+.++.+.++|.+.|.++.-....-.
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g~-~~~~~~~v~~i~~~~p~~~-Vi~-g~v-~t~e~a~~l~~aGaD~I~vg~g~Gs~~~ 306 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHGH-SKGVIERVRWVKQTFPDVQ-VIG-GNI-ATAEAAKALAEAGADAVKVGIGPGSICT 306 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCS-BHHHHHHHHHHHHHCTTSE-EEE-EEE-CSHHHHHHHHHTTCSEEEECSSCSTTCH
T ss_pred HHHHHHHhhcccceEEecccCCc-chhHHHHHHHHHHHCCCce-EEE-eee-CcHHHHHHHHHcCCCEEEECCCCCcCCC
Confidence 34455666678888888644332 235668888888753 442 433 332 2356788899999999999652211111
Q ss_pred hhhhcCC--CcHHHHHHHHHHHHHcCCCCEEEEEEEecCC-CHhHHHHHHH
Q 022377 100 FEFLTRR--KGHEKVMESINAAIEVGYNPVKVNCVVMRGF-NDDEICDFVE 147 (298)
Q Consensus 100 ~~~ir~~--~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~-n~~~i~~i~~ 147 (298)
.....+. ..+..+.+..+.+.+.++ ++. ..-|. +..++.+.+.
T Consensus 307 t~~~~g~g~p~~~~l~~v~~~~~~~~i-PVI----a~GGI~~~~di~kal~ 352 (490)
T 4avf_A 307 TRIVAGVGVPQISAIANVAAALEGTGV-PLI----ADGGIRFSGDLAKAMV 352 (490)
T ss_dssp HHHHTCBCCCHHHHHHHHHHHHTTTTC-CEE----EESCCCSHHHHHHHHH
T ss_pred ccccCCCCccHHHHHHHHHHHhccCCC-cEE----EeCCCCCHHHHHHHHH
Confidence 1122222 335555555555545566 542 22232 4455554443
No 213
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=45.51 E-value=74 Score=27.55 Aligned_cols=73 Identities=11% Similarity=0.019 Sum_probs=48.8
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccCc--c--------ccHHHHHHHHhccC-CCCcEEEEeCccch-HhhHHHHHH
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTGGEPTV--R--------KDIEEACFHLSKLK-GLKTLAMTTNGLTL-ARKLPKLKE 82 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tGGEPll--~--------~~~~~ii~~~~~~~-~~~~v~i~TNG~ll-~~~~~~l~~ 82 (298)
.+.++...+++.+.+.|+..|.++|+..-. . +-..+++..+++.. ++ -+..||-.. .+.+.++.+
T Consensus 141 ~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~i---PVianGgI~s~eda~~~l~ 217 (350)
T 3b0p_A 141 ETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQL---TFVTNGGIRSLEEALFHLK 217 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTS---EEEEESSCCSHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCC---eEEEECCcCCHHHHHHHHh
Confidence 456778888888899999999999876421 1 11246666666643 33 455566543 566777776
Q ss_pred cCCCeEEEe
Q 022377 83 SGLTSVNIS 91 (298)
Q Consensus 83 ~~~~~v~iS 91 (298)
|.+.|.|.
T Consensus 218 -GaD~V~iG 225 (350)
T 3b0p_A 218 -RVDGVMLG 225 (350)
T ss_dssp -TSSEEEEC
T ss_pred -CCCEEEEC
Confidence 89988886
No 214
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=45.45 E-value=62 Score=28.24 Aligned_cols=72 Identities=11% Similarity=0.001 Sum_probs=43.1
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCC----ccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcC-CCeE
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGG----EPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESG-LTSV 88 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGG----EPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~-~~~v 88 (298)
..+.+++..+++.+.+.|+..|.+++| .|-. + .++++.+++..++ -+..||-+..+.++++.+.| .|.|
T Consensus 246 ~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~-~--~~~~~~i~~~~~i---Pvi~~Ggi~~~~a~~~l~~g~aD~V 319 (365)
T 2gou_A 246 ADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDT-P--VSFKRALREAYQG---VLIYAGRYNAEKAEQAINDGLADMI 319 (365)
T ss_dssp SSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCC-C--HHHHHHHHHHCCS---EEEEESSCCHHHHHHHHHTTSCSEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCc-c--HHHHHHHHHHCCC---cEEEeCCCCHHHHHHHHHCCCccee
Confidence 346777788888888888888888765 2321 1 2455555554343 23444444445666666666 7766
Q ss_pred EEe
Q 022377 89 NIS 91 (298)
Q Consensus 89 ~iS 91 (298)
.+.
T Consensus 320 ~ig 322 (365)
T 2gou_A 320 GFG 322 (365)
T ss_dssp ECC
T ss_pred hhc
Confidence 664
No 215
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=45.41 E-value=73 Score=27.99 Aligned_cols=70 Identities=9% Similarity=-0.072 Sum_probs=40.9
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCc---cCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcC-CCeEEE
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTGGE---PTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tGGE---Pll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~-~~~v~i 90 (298)
.+.+++..+++.+.+.|+..|.+++|- |- .+. + ++.+++..++. +.+||-+..+..+++.+.+ .|.|.+
T Consensus 263 ~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~-~~~--~-~~~ir~~~~iP---vi~~G~it~~~a~~~l~~g~aD~V~i 335 (379)
T 3aty_A 263 NPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQ-IGD--V-VAWVRGSYSGV---KISNLRYDFEEADQQIREGKVDAVAF 335 (379)
T ss_dssp CHHHHHHHHHHHHGGGCCSEEEEECSCTTSCC-CCC--H-HHHHHTTCCSC---EEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCC-ccH--H-HHHHHHHCCCc---EEEECCCCHHHHHHHHHcCCCeEEEe
Confidence 466777777777777787777777642 11 122 4 55566543442 3344444445566666655 776666
Q ss_pred e
Q 022377 91 S 91 (298)
Q Consensus 91 S 91 (298)
.
T Consensus 336 g 336 (379)
T 3aty_A 336 G 336 (379)
T ss_dssp S
T ss_pred c
Confidence 5
No 216
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=45.36 E-value=39 Score=27.14 Aligned_cols=111 Identities=14% Similarity=0.123 Sum_probs=66.3
Q ss_pred HHHHHhCCCCEEEEcCCccCccccH-HHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHc--CCCeEEE-ecCCCCHHh
Q 022377 24 AYLFVTSGVDKIRLTGGEPTVRKDI-EEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKES--GLTSVNI-SLDTLVPAK 99 (298)
Q Consensus 24 i~~~~~~~~~~v~~tGGEPll~~~~-~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~--~~~~v~i-Sldg~~~~~ 99 (298)
++.+.+.|...|.|+++++- +. .+.++.+++. |+. +.+..|.....+.++.+.+. +.+.|.+ |+.. -
T Consensus 80 i~~~~~agad~v~vH~~~~~---~~~~~~~~~i~~~-g~~-igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~p---g- 150 (228)
T 1h1y_A 80 VEPLAKAGASGFTFHIEVSR---DNWQELIQSIKAK-GMR-PGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEP---G- 150 (228)
T ss_dssp HHHHHHHTCSEEEEEGGGCT---TTHHHHHHHHHHT-TCE-EEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCT---T-
T ss_pred HHHHHHcCCCEEEECCCCcc---cHHHHHHHHHHHc-CCC-EEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecC---C-
Confidence 55556678889999987653 33 6777888774 885 88888754444566777665 7888776 3331 0
Q ss_pred hhhhcCCCcH-HHHHHHHHHHHHc--CCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCee
Q 022377 100 FEFLTRRKGH-EKVMESINAAIEV--GYNPVKVNCVVMRGFNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 100 ~~~ir~~~~~-~~v~~~i~~l~~~--g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~~ 156 (298)
. .+ ..| ...++.++.+++. ++ + +.+.-|.|.+.+.++++. |+++
T Consensus 151 ~---~g-~~~~~~~l~~i~~~~~~~~~~-p----i~v~GGI~~~ni~~~~~a----GaD~ 197 (228)
T 1h1y_A 151 F---GG-QKFMPEMMEKVRALRKKYPSL-D----IEVDGGLGPSTIDVAASA----GANC 197 (228)
T ss_dssp C---SS-CCCCGGGHHHHHHHHHHCTTS-E----EEEESSCSTTTHHHHHHH----TCCE
T ss_pred C---Cc-ccCCHHHHHHHHHHHHhcCCC-C----EEEECCcCHHHHHHHHHc----CCCE
Confidence 0 01 111 2345556666654 33 3 344556777666666553 6654
No 217
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=45.32 E-value=54 Score=28.61 Aligned_cols=72 Identities=14% Similarity=0.097 Sum_probs=45.5
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCc----cCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcC-CCeE
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGE----PTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESG-LTSV 88 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGE----Pll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~-~~~v 88 (298)
..+.++...+++.+.+.|+..|.+++|- |-. -.++++.+++..++ -+..||-+..+.++++.+.+ .|.|
T Consensus 247 ~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~---~~~~~~~v~~~~~i---Pvi~~Ggit~~~a~~~l~~g~aD~V 320 (364)
T 1vyr_A 247 PNEEADALYLIEELAKRGIAYLHMSETDLAGGKPY---SEAFRQKVRERFHG---VIIGAGAYTAEKAEDLIGKGLIDAV 320 (364)
T ss_dssp TTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCC---CHHHHHHHHHHCCS---EEEEESSCCHHHHHHHHHTTSCSEE
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcc---cHHHHHHHHHHCCC---CEEEECCcCHHHHHHHHHCCCccEE
Confidence 3467788888888888888888888642 111 13455566654343 34455544455677777766 7877
Q ss_pred EEe
Q 022377 89 NIS 91 (298)
Q Consensus 89 ~iS 91 (298)
.+.
T Consensus 321 ~~g 323 (364)
T 1vyr_A 321 AFG 323 (364)
T ss_dssp EES
T ss_pred EEC
Confidence 775
No 218
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=45.16 E-value=1.5e+02 Score=25.62 Aligned_cols=98 Identities=14% Similarity=0.059 Sum_probs=65.4
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++..+ +.+++..+ +-|.++..+. ...++.+.+.+ ++.|+
T Consensus 196 n~~~~~~~a~~~~~~l~~~~i~~iE----qP~~~~~~~~~-~~l~~~~~---iPia~dE~~~~~~~~~~~~~~~~~d~v~ 267 (370)
T 1chr_A 196 NQAWDEQVASVYIPELEALGVELIE----QPVGRENTQAL-RRLSDNNR---VAIMADESLSTLASAFDLARDRSVDVFS 267 (370)
T ss_dssp TTCCCTTHHHHHTHHHHTTTEEEEE----CCSCTTCHHHH-HHHHHHSC---SEEEESSSCCSHHHHHHHHTTTSCSEEE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE----CCCCcccHHHH-HHHHhhCC---CCEEeCCCcCCHHHHHHHHHcCCCCEEE
Confidence 4456778888888888888765554 78865555433 44444334 4466777665 34566666654 77777
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
+.+.- .+++...++....+.++|+ ++.+
T Consensus 268 ~k~~~-----------~GGit~~~~i~~~A~~~g~-~~~~ 295 (370)
T 1chr_A 268 LKLCN-----------MGGVSATQKIAAVAEASGI-ASYG 295 (370)
T ss_dssp ECTTT-----------SCSHHHHHHHHHHHHHHTC-EEEE
T ss_pred ECccc-----------cCCHHHHHHHHHHHHHcCC-eEEe
Confidence 76532 3568899999999999999 6543
No 219
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=45.15 E-value=1.6e+02 Score=25.79 Aligned_cols=98 Identities=14% Similarity=0.131 Sum_probs=68.9
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHh-ccCCCCcEEEEeCccchH-hhHHHHHHcC-CCeE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLS-KLKGLKTLAMTTNGLTLA-RKLPKLKESG-LTSV 88 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~-~~~~~~~v~i~TNG~ll~-~~~~~l~~~~-~~~v 88 (298)
+.-.+.++..++++.+.++++..|- ||+-..++. -++.++ +..+ +-|.++..+.+ +.++.+.+.+ ++.|
T Consensus 203 n~~~~~~~A~~~~~~l~~~~i~~iE----qP~~~~d~~-~~~~l~~~~~~---iPIa~dE~i~~~~~~~~~i~~~~~d~v 274 (389)
T 3ozy_A 203 NQSLGRHDALAMLRILDEAGCYWFE----EPLSIDDIE-GHRILRAQGTP---VRIATGENLYTRNAFNDYIRNDAIDVL 274 (389)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCSEEE----SCSCTTCHH-HHHHHHTTCCS---SEEEECTTCCHHHHHHHHHHTTCCSEE
T ss_pred CCCcCHHHHHHHHHHHHhcCCCEEE----CCCCcccHH-HHHHHHhcCCC---CCEEeCCCCCCHHHHHHHHHcCCCCEE
Confidence 4557899999999999999988775 788654544 345565 4323 56778887763 4677776654 6666
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
++.+. ..+++..+++....+.++|+ ++.+
T Consensus 275 ~ik~~-----------~~GGit~~~~ia~~A~~~gi-~~~~ 303 (389)
T 3ozy_A 275 QADAS-----------RAGGITEALAISASAASAHL-AWNP 303 (389)
T ss_dssp CCCTT-----------TSSCHHHHHHHHHHHHHTTC-EECC
T ss_pred EeCcc-----------ccCCHHHHHHHHHHHHHcCC-EEEe
Confidence 55432 24678999999999999999 5543
No 220
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=45.12 E-value=77 Score=27.61 Aligned_cols=83 Identities=19% Similarity=0.289 Sum_probs=52.7
Q ss_pred CCCCCCHHHHHHHHHHH-------HhCCCCEEEEcCCc---------cCcc-------------ccH-HHHHHHHhccCC
Q 022377 11 KPQLLSLNEILRLAYLF-------VTSGVDKIRLTGGE---------PTVR-------------KDI-EEACFHLSKLKG 60 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~-------~~~~~~~v~~tGGE---------Pll~-------------~~~-~~ii~~~~~~~~ 60 (298)
...+||.+++..+++.+ .+.|...|.+.+|- |..+ ..+ .++++.+++.-+
T Consensus 147 ~p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg 226 (364)
T 1vyr_A 147 TPRALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWS 226 (364)
T ss_dssp CCEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSC
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcC
Confidence 45679999998887655 34688899997654 4322 224 488888887433
Q ss_pred CCcEEE--EeCc--------c-chH---hhHHHHHHcCCCeEEEecC
Q 022377 61 LKTLAM--TTNG--------L-TLA---RKLPKLKESGLTSVNISLD 93 (298)
Q Consensus 61 ~~~v~i--~TNG--------~-ll~---~~~~~l~~~~~~~v~iSld 93 (298)
-..+.+ ..+. . -++ +.++.|.+.|++.|.+|--
T Consensus 227 ~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~ 273 (364)
T 1vyr_A 227 ADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSET 273 (364)
T ss_dssp GGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecC
Confidence 102444 3331 0 112 3467888899999999863
No 221
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=45.08 E-value=1.2e+02 Score=24.56 Aligned_cols=125 Identities=14% Similarity=0.110 Sum_probs=65.0
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCc-cCc---cc-cHHHHHHHHhccCCCCcEEEEeCcc--ch-----------Hh
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGE-PTV---RK-DIEEACFHLSKLKGLKTLAMTTNGL--TL-----------AR 75 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGE-Pll---~~-~~~~ii~~~~~~~~~~~v~i~TNG~--ll-----------~~ 75 (298)
.++.++. ++.+.+.|...|-+.+.. +-+ .+ +..++-+.+.+ .|+. +...+.-. .. .+
T Consensus 14 ~~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~-~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (286)
T 3dx5_A 14 LISFTDI---VQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKD-KTLE-ITMISDYLDISLSADFEKTIEKCEQ 88 (286)
T ss_dssp CCCHHHH---HHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGG-GTCC-EEEEECCCCCSTTSCHHHHHHHHHH
T ss_pred CCCHHHH---HHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHH-cCCe-EEEEecCCCCCCchhHHHHHHHHHH
Confidence 3666664 666678899999986531 111 12 24466666666 4986 55443211 01 12
Q ss_pred hHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHH----HcCCCCEEEEEEEecCC---CHhHHHHHHHH
Q 022377 76 KLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAI----EVGYNPVKVNCVVMRGF---NDDEICDFVEL 148 (298)
Q Consensus 76 ~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~----~~g~~~v~i~~vi~~~~---n~~~i~~i~~~ 148 (298)
.++.....|...|.+..-...... .....++.+.+.++.+. ++|+ .+.+... ++. +.+++.++++-
T Consensus 89 ~i~~A~~lG~~~v~~~~g~~~~~~----~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE~~--~~~~~~~~~~~~~l~~~ 161 (286)
T 3dx5_A 89 LAILANWFKTNKIRTFAGQKGSAD----FSQQERQEYVNRIRMICELFAQHNM-YVLLETH--PNTLTDTLPSTLELLGE 161 (286)
T ss_dssp HHHHHHHHTCCEEEECSCSSCGGG----SCHHHHHHHHHHHHHHHHHHHHTTC-EEEEECC--TTSTTSSHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEcCCCCCccc----CcHHHHHHHHHHHHHHHHHHHHhCC-EEEEecC--CCcCcCCHHHHHHHHHh
Confidence 345555668888877432211110 01113566666665554 4577 6666542 221 33455555555
Q ss_pred Hh
Q 022377 149 TR 150 (298)
Q Consensus 149 ~~ 150 (298)
+.
T Consensus 162 ~~ 163 (286)
T 3dx5_A 162 VD 163 (286)
T ss_dssp HC
T ss_pred cC
Confidence 43
No 222
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=45.04 E-value=54 Score=29.11 Aligned_cols=83 Identities=14% Similarity=0.251 Sum_probs=53.5
Q ss_pred CCCCCCHHHHHHHHHHHH-------hCCCCEEEEcCCc---------cCcc-------------ccH-HHHHHHHhccCC
Q 022377 11 KPQLLSLNEILRLAYLFV-------TSGVDKIRLTGGE---------PTVR-------------KDI-EEACFHLSKLKG 60 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~-------~~~~~~v~~tGGE---------Pll~-------------~~~-~~ii~~~~~~~~ 60 (298)
...+||.+||.++++.+. +.|...|.+.+|- |..+ ..+ .++++.+++.-+
T Consensus 157 ~p~~mt~~eI~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg 236 (402)
T 2hsa_B 157 KPRAIGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIG 236 (402)
T ss_dssp CCEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhC
Confidence 346799999998887553 4688899998875 6642 234 488888877422
Q ss_pred CCcEEEEeCcc----------ch---HhhHHHHHHcC------CCeEEEecC
Q 022377 61 LKTLAMTTNGL----------TL---ARKLPKLKESG------LTSVNISLD 93 (298)
Q Consensus 61 ~~~v~i~TNG~----------ll---~~~~~~l~~~~------~~~v~iSld 93 (298)
-..|.+--+.. -+ .+.++.|.+.| ++.|.+|--
T Consensus 237 ~~~V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~ 288 (402)
T 2hsa_B 237 ADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQP 288 (402)
T ss_dssp GGGEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECC
T ss_pred CCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecC
Confidence 10244433321 11 23467777888 999999853
No 223
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=44.94 E-value=1.6e+02 Score=25.66 Aligned_cols=112 Identities=16% Similarity=0.226 Sum_probs=58.1
Q ss_pred HHHHhCCCCEEEE--cCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEecCCCCHHhhhh
Q 022377 25 YLFVTSGVDKIRL--TGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKFEF 102 (298)
Q Consensus 25 ~~~~~~~~~~v~~--tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSldg~~~~~~~~ 102 (298)
+.+.+.|+..|.+ .-|.| ..+.+.++.+++..++. +.+ .|. ...+.++.+.++|.+.|.++.....-..-+.
T Consensus 111 ~~l~eaGad~I~ld~a~G~~---~~~~~~i~~i~~~~~~~-Viv-g~v-~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~ 184 (361)
T 3khj_A 111 KLLVEAGVDVIVLDSAHGHS---LNIIRTLKEIKSKMNID-VIV-GNV-VTEEATKELIENGADGIKVGIGPGSICTTRI 184 (361)
T ss_dssp HHHHHTTCSEEEECCSCCSB---HHHHHHHHHHHHHCCCE-EEE-EEE-CSHHHHHHHHHTTCSEEEECSSCCTTCCHHH
T ss_pred HHHHHcCcCeEEEeCCCCCc---HHHHHHHHHHHHhcCCc-EEE-ccC-CCHHHHHHHHHcCcCEEEEecCCCcCCCccc
Confidence 3344456666666 23443 23567787777744553 433 232 2356788889999999999754321111112
Q ss_pred hcC--CCcHHHHHHHHHHHHHcCCCCEEEEEEEecCC-CHhHHHHHHH
Q 022377 103 LTR--RKGHEKVMESINAAIEVGYNPVKVNCVVMRGF-NDDEICDFVE 147 (298)
Q Consensus 103 ir~--~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~-n~~~i~~i~~ 147 (298)
+.+ .+.+..+.+..+.+.+.++ ++ +..-|. +..++.+.+.
T Consensus 185 ~~g~g~p~~~~i~~v~~~~~~~~i-PV----IA~GGI~~~~di~kala 227 (361)
T 3khj_A 185 VAGVGVPQITAIEKCSSVASKFGI-PI----IADGGIRYSGDIGKALA 227 (361)
T ss_dssp HTCBCCCHHHHHHHHHHHHHHHTC-CE----EEESCCCSHHHHHHHHH
T ss_pred ccCCCCCcHHHHHHHHHHHhhcCC-eE----EEECCCCCHHHHHHHHH
Confidence 222 2335544444444445577 54 222233 4455554444
No 224
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=44.36 E-value=1.7e+02 Score=29.29 Aligned_cols=75 Identities=19% Similarity=0.247 Sum_probs=53.4
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCccCc------------ccc-HHHHHHHHhccCCCCcEE--EEeCccchHhhHHHH
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLTGGEPTV------------RKD-IEEACFHLSKLKGLKTLA--MTTNGLTLARKLPKL 80 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~tGGEPll------------~~~-~~~ii~~~~~~~~~~~v~--i~TNG~ll~~~~~~l 80 (298)
+.+++.++++.+.+.|...|.+..|=|.. +++ +.++++.+++..++. +. +..+..-+.+.++.+
T Consensus 646 ~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~P-v~vK~~~~~~~~~~~a~~~ 724 (1025)
T 1gte_A 646 NKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP-FFAKLTPNVTDIVSIARAA 724 (1025)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSC-EEEEECSCSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCc-eEEEeCCChHHHHHHHHHH
Confidence 57889999998888888888886555542 344 448899888754553 44 444444345678888
Q ss_pred HHcCCCeEEEe
Q 022377 81 KESGLTSVNIS 91 (298)
Q Consensus 81 ~~~~~~~v~iS 91 (298)
.+.|++.|.+|
T Consensus 725 ~~~G~d~i~v~ 735 (1025)
T 1gte_A 725 KEGGADGVTAT 735 (1025)
T ss_dssp HHHTCSEEEEC
T ss_pred HHcCCCEEEEe
Confidence 89999999984
No 225
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=44.21 E-value=1.2e+02 Score=26.23 Aligned_cols=137 Identities=13% Similarity=0.116 Sum_probs=77.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhcc--CCCCcEEEEeCccch-Hh---hHHHHHHcCCCeE
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKL--KGLKTLAMTTNGLTL-AR---KLPKLKESGLTSV 88 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~--~~~~~v~i~TNG~ll-~~---~~~~l~~~~~~~v 88 (298)
.+.+++.+.+.++.+.|...|.+-.|.+-+. ...++++.+++. .++. +.+.-|+... ++ .++.|.+.+++++
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~-~~~e~v~avr~a~G~d~~-l~vDan~~~~~~~a~~~~~~l~~~~i~~i 222 (371)
T 2ovl_A 145 LPVADLKTQADRFLAGGFRAIKMKVGRPDLK-EDVDRVSALREHLGDSFP-LMVDANMKWTVDGAIRAARALAPFDLHWI 222 (371)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECCCSSHH-HHHHHHHHHHHHHCTTSC-EEEECTTCSCHHHHHHHHHHHGGGCCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCHH-HHHHHHHHHHHHhCCCCe-EEEECCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 4788888888888888988888876654222 234667777663 3574 8999997654 33 4566667788877
Q ss_pred EEecCCCCHHhhhhhcC--------CCcHHHHHHHHHHHHHcCCCCEEEEEEEec-CCCHhHHHHHHHHHhhCCCee
Q 022377 89 NISLDTLVPAKFEFLTR--------RKGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~--------~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~-~~n~~~i~~i~~~~~~~g~~~ 156 (298)
.=.+...+-+.+..++. ..+... .+.++.+.+.+...+ ++.-+.+ | ...+..++++++...|+.+
T Consensus 223 EqP~~~~d~~~~~~l~~~~~iPI~~dE~~~~-~~~~~~~i~~~~~d~-v~ik~~~~G-Gi~~~~~i~~~A~~~gi~~ 296 (371)
T 2ovl_A 223 EEPTIPDDLVGNARIVRESGHTIAGGENLHT-LYDFHNAVRAGSLTL-PEPDVSNIG-GYTTFRKVAALAEANNMLL 296 (371)
T ss_dssp ECCSCTTCHHHHHHHHHHHCSCEEECTTCCS-HHHHHHHHHHTCCSE-ECCCTTTTT-SHHHHHHHHHHHHHTTCCE
T ss_pred ECCCCcccHHHHHHHHhhCCCCEEeCCCCCC-HHHHHHHHHcCCCCE-EeeCccccC-CHHHHHHHHHHHHHcCCeE
Confidence 65554333344444432 111111 223333333332021 1221121 1 3566777777777777753
No 226
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=44.01 E-value=1.5e+02 Score=25.09 Aligned_cols=125 Identities=14% Similarity=0.098 Sum_probs=65.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcC-----CccCccc-----cHHHHHHHHhccCCCCcEEEEeCccchHhhH
Q 022377 8 LTPKPQLLSLNEILRLAYLFVTSGVDKIRLTG-----GEPTVRK-----DIEEACFHLSKLKGLKTLAMTTNGLTLARKL 77 (298)
Q Consensus 8 ~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tG-----GEPll~~-----~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~ 77 (298)
|-..+..++.+.+.+...++.+.|..-|.+.| |-+-+.. .+..+++.+++. ++. ++|.|-= .+.+
T Consensus 42 Fsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~-~vp-iSIDT~~---~~Va 116 (294)
T 2dqw_A 42 FSDGGRYLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL-GVP-VSVDTRK---PEVA 116 (294)
T ss_dssp -----------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT-CSC-EEEECSC---HHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC-CCe-EEEECCC---HHHH
Confidence 44445567778877777777888877777765 3222222 155677777664 775 8887643 3445
Q ss_pred HHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEE--ecCCC--------------HhH
Q 022377 78 PKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV--MRGFN--------------DDE 141 (298)
Q Consensus 78 ~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi--~~~~n--------------~~~ 141 (298)
+.-.++|.+ +.=|+.+.. .+ +.++.+.++|. ++.+...- ++ .+ .+.
T Consensus 117 ~aAl~aGa~-iINdVsg~~------------d~---~m~~v~a~~~~-~vVlmh~~eG~p-~tm~~~~~y~dv~~ev~~~ 178 (294)
T 2dqw_A 117 EEALKLGAH-LLNDVTGLR------------DE---RMVALAARHGV-AAVVMHMPVPDP-ATMMAHARYRDVVAEVKAF 178 (294)
T ss_dssp HHHHHHTCS-EEECSSCSC------------CH---HHHHHHHHHTC-EEEEECCSSSCT-TTGGGGCCCSSHHHHHHHH
T ss_pred HHHHHhCCC-EEEECCCCC------------Ch---HHHHHHHHhCC-CEEEEcCCCCCC-ccccccCccccHHHHHHHH
Confidence 555555777 445555521 11 23455667787 77776653 33 22 234
Q ss_pred HHHHHHHHhhCCCe
Q 022377 142 ICDFVELTRDRPIN 155 (298)
Q Consensus 142 i~~i~~~~~~~g~~ 155 (298)
+.+.++.+.+.|+.
T Consensus 179 l~~~i~~a~~~Gi~ 192 (294)
T 2dqw_A 179 LEAQARRALSAGVP 192 (294)
T ss_dssp HHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHCCCC
Confidence 66677777777875
No 227
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=43.99 E-value=56 Score=27.98 Aligned_cols=61 Identities=13% Similarity=0.221 Sum_probs=37.5
Q ss_pred HHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEe
Q 022377 20 ILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 20 ~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iS 91 (298)
+...++.+.+.|+..|.+.+|.| .++++.+++. ++. +.+... ..+.++.+.+.|.|.|.++
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~g~p------~~~i~~l~~~-g~~-v~~~v~---~~~~a~~~~~~GaD~i~v~ 137 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGAGNP------SKYMERFHEA-GII-VIPVVP---SVALAKRMEKIGADAVIAE 137 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCG------GGTHHHHHHT-TCE-EEEEES---SHHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCh------HHHHHHHHHc-CCe-EEEEeC---CHHHHHHHHHcCCCEEEEE
Confidence 34455556667788888888877 2345555553 664 443321 1245667777889988884
No 228
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=43.92 E-value=88 Score=27.30 Aligned_cols=99 Identities=10% Similarity=0.075 Sum_probs=64.1
Q ss_pred CCCCCHHHHHHHHHHHHhC-CCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeE
Q 022377 12 PQLLSLNEILRLAYLFVTS-GVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSV 88 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~-~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v 88 (298)
+.-.+.++..++++.+.++ ++..+- ||+-..++ +-.+.+++..+ +-|.+.+.+. .+.++++.+.+ .+.|
T Consensus 192 n~~~~~~~a~~~~~~l~~~~~i~~iE----qP~~~~d~-~~~~~l~~~~~---iPIa~dE~~~~~~~~~~~i~~~~~d~v 263 (382)
T 2gdq_A 192 NQSYDAAAAFKWERYFSEWTNIGWLE----EPLPFDQP-QDYAMLRSRLS---VPVAGGENMKGPAQYVPLLSQRCLDII 263 (382)
T ss_dssp TTCCCHHHHHTTHHHHTTCSCEEEEE----CCSCSSCH-HHHHHHHTTCS---SCEEECTTCCSHHHHHHHHHTTCCSEE
T ss_pred CCCCCHHHHHHHHHHHhhccCCeEEE----CCCCcccH-HHHHHHHhhCC---CCEEecCCcCCHHHHHHHHHcCCCCEE
Confidence 3456888888888888777 655443 78754343 44445555334 4466777665 45677776654 6655
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEE
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 130 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 130 (298)
++.+. ..+++..+++.++.+.++|+ ++.+.
T Consensus 264 ~ik~~-----------~~GGit~~~~i~~~A~~~g~-~~~~~ 293 (382)
T 2gdq_A 264 QPDVM-----------HVNGIDEFRDCLQLARYFGV-RASAH 293 (382)
T ss_dssp CCCTT-----------TTTHHHHHHHHHHHHHHHTC-EECCC
T ss_pred ecCcc-----------ccCCHHHHHHHHHHHHHcCC-EEeec
Confidence 55432 23568899999999999999 65444
No 229
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=43.85 E-value=75 Score=24.72 Aligned_cols=29 Identities=14% Similarity=0.044 Sum_probs=24.3
Q ss_pred cCccccHHHHHHHHhccCCCCcEEEEeCccc
Q 022377 42 PTVRKDIEEACFHLSKLKGLKTLAMTTNGLT 72 (298)
Q Consensus 42 Pll~~~~~~ii~~~~~~~~~~~v~i~TNG~l 72 (298)
|.+.|+..++++.+++. |+. +.|.||+..
T Consensus 91 ~~~~~g~~~~l~~l~~~-g~~-~~ivS~~~~ 119 (232)
T 3fvv_A 91 PSLTVQAVDVVRGHLAA-GDL-CALVTATNS 119 (232)
T ss_dssp GGCCHHHHHHHHHHHHT-TCE-EEEEESSCH
T ss_pred hhcCHHHHHHHHHHHHC-CCE-EEEEeCCCH
Confidence 45788999999999984 995 999999953
No 230
>3ol0_A De novo designed monomer trefoil-fold SUB-domain forms HOMO-trimer assembly; beta-trefoil, synthetic protein, function-COMP only; 1.48A {Synthetic construct}
Probab=43.56 E-value=15 Score=21.97 Aligned_cols=31 Identities=13% Similarity=-0.080 Sum_probs=22.5
Q ss_pred ccCCCCeEEEecccceeecCCCCCCCCcchH
Q 022377 224 FCAGCNRLRLLADGNFKVCLFGPSEVSLRDP 254 (298)
Q Consensus 224 ~C~~~~~~~I~~dG~v~pC~~~~~~~~l~~~ 254 (298)
.|...-.+.|.|||.|-.+.-.+..+++.++
T Consensus 12 ~~~~Gf~LqI~PdG~V~GTr~~~s~~SlLEi 42 (48)
T 3ol0_A 12 STETGQYLRINPDGTVDGTRDRSDPHIQFQI 42 (48)
T ss_dssp ETTTCCEEEECTTSBEEEESCTTCGGGCEEE
T ss_pred eccCcEEeEECCCCCCccccCCCCCcceEEE
Confidence 4655567999999999999766655555443
No 231
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=43.44 E-value=1.3e+02 Score=24.46 Aligned_cols=118 Identities=11% Similarity=0.172 Sum_probs=66.3
Q ss_pred HHHHHHHhCCCCEEEEcCCccC-ccc-cHHHHHHHHhccCCCCcEEEEeCc-----------------cc----------
Q 022377 22 RLAYLFVTSGVDKIRLTGGEPT-VRK-DIEEACFHLSKLKGLKTLAMTTNG-----------------LT---------- 72 (298)
Q Consensus 22 ~~i~~~~~~~~~~v~~tGGEPl-l~~-~~~~ii~~~~~~~~~~~v~i~TNG-----------------~l---------- 72 (298)
..++.+.+.|...|.+....|. +.+ ++.++.+.+.+ .|+. +...+.+ ..
T Consensus 25 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~-~gl~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~ 102 (290)
T 3tva_A 25 VHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDA-AGIQ-VTVIFGGFDGESYADIPTTARTVGLVPLETRASRVA 102 (290)
T ss_dssp BCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHH-TTCE-EEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHH-cCCE-EEEEeeccCCcccccccccccccCCCCHHHHHHHHH
Confidence 3567777889999999864442 223 35577777777 4986 6544321 00
Q ss_pred -hHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHH----cCCCCEEEEEEEecCCCHhHHHHHHH
Q 022377 73 -LARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIE----VGYNPVKVNCVVMRGFNDDEICDFVE 147 (298)
Q Consensus 73 -l~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~----~g~~~v~i~~vi~~~~n~~~i~~i~~ 147 (298)
+.+.++.....|...|.+.. |..++. ....++.+.+.++.+.+ +|+ .+.+... . .+.+++.++++
T Consensus 103 ~~~~~i~~a~~lG~~~v~~~~-G~~~~~-----~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE~~--~-~~~~~~~~l~~ 172 (290)
T 3tva_A 103 EMKEISDFASWVGCPAIGLHI-GFVPES-----SSPDYSELVRVTQDLLTHAANHGQ-AVHLETG--Q-ESADHLLEFIE 172 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEECC-CCCCCT-----TSHHHHHHHHHHHHHHHHHHTTTC-EEEEECC--S-SCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcC-CCCccc-----chHHHHHHHHHHHHHHHHHHHcCC-EEEEecC--C-CCHHHHHHHHH
Confidence 11234445556888787743 222211 12246777777766654 466 5555543 2 35566666666
Q ss_pred HHhh
Q 022377 148 LTRD 151 (298)
Q Consensus 148 ~~~~ 151 (298)
-+..
T Consensus 173 ~~~~ 176 (290)
T 3tva_A 173 DVNR 176 (290)
T ss_dssp HHCC
T ss_pred hcCC
Confidence 6543
No 232
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=43.31 E-value=93 Score=26.45 Aligned_cols=61 Identities=18% Similarity=0.334 Sum_probs=38.7
Q ss_pred HHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEe
Q 022377 20 ILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 20 ~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iS 91 (298)
+...++.+.+.|+..|.+.+|+| .++++.+++. ++. +..... ..+....+.+.|.|.|.++
T Consensus 85 ~~~~~~~~~~~g~d~V~~~~g~p------~~~~~~l~~~-gi~-vi~~v~---t~~~a~~~~~~GaD~i~v~ 145 (328)
T 2gjl_A 85 YAEYRAAIIEAGIRVVETAGNDP------GEHIAEFRRH-GVK-VIHKCT---AVRHALKAERLGVDAVSID 145 (328)
T ss_dssp HHHHHHHHHHTTCCEEEEEESCC------HHHHHHHHHT-TCE-EEEEES---SHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEcCCCc------HHHHHHHHHc-CCC-EEeeCC---CHHHHHHHHHcCCCEEEEE
Confidence 34456666677888888888877 4566677664 664 443221 1344566777889988763
No 233
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=43.29 E-value=41 Score=29.58 Aligned_cols=25 Identities=12% Similarity=0.036 Sum_probs=14.2
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCC
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLTGG 40 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~tGG 40 (298)
+.++...+++.+.+.|+..|.+++|
T Consensus 253 ~~~~~~~la~~le~~Gvd~i~v~~~ 277 (377)
T 2r14_A 253 PEAMAFYLAGELDRRGLAYLHFNEP 277 (377)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 4455555555555566655665543
No 234
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=43.05 E-value=31 Score=22.28 Aligned_cols=45 Identities=20% Similarity=0.324 Sum_probs=29.6
Q ss_pred CcHHHHHHHHHHHH-HcCCCCEEEEEEEecCCCHhHHHHHHH----HHhhCCC
Q 022377 107 KGHEKVMESINAAI-EVGYNPVKVNCVVMRGFNDDEICDFVE----LTRDRPI 154 (298)
Q Consensus 107 ~~~~~v~~~i~~l~-~~g~~~v~i~~vi~~~~n~~~i~~i~~----~~~~~g~ 154 (298)
..++++++-+.... .+|. -.+.++++. .|+++..++++ ++..+|.
T Consensus 29 keleralqelekalaraga--rnvqitisa-endeqakelleliarllqklgy 78 (96)
T 2jvf_A 29 KELERALQELEKALARAGA--RNVQITISA-ENDEQAKELLELIARLLQKLGY 78 (96)
T ss_dssp SHHHHHHHHHHHHHHHHTC--SEEEEEEEC-SSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhccc--cceEEEEEe-cChHHHHHHHHHHHHHHHHhCC
Confidence 34889998887665 4676 345778887 79877555544 4445665
No 235
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=42.89 E-value=67 Score=30.43 Aligned_cols=81 Identities=25% Similarity=0.323 Sum_probs=53.1
Q ss_pred CCCCCHHHHHHHHHHHH-------hCCCCEEEEcCCc---------cCc-------------cccH-HHHHHHHhccC--
Q 022377 12 PQLLSLNEILRLAYLFV-------TSGVDKIRLTGGE---------PTV-------------RKDI-EEACFHLSKLK-- 59 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~-------~~~~~~v~~tGGE---------Pll-------------~~~~-~~ii~~~~~~~-- 59 (298)
..+||.+||.++++.+. +.|...|.+.+|- |.. +..+ .++++.+++.-
T Consensus 128 p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~ 207 (671)
T 1ps9_A 128 PHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGN 207 (671)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCS
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCC
Confidence 46799999988887554 3688899998765 443 2333 48888887742
Q ss_pred CCC-cEEEEeC-----ccchH---hhHHHHHHcCCCeEEEec
Q 022377 60 GLK-TLAMTTN-----GLTLA---RKLPKLKESGLTSVNISL 92 (298)
Q Consensus 60 ~~~-~v~i~TN-----G~ll~---~~~~~l~~~~~~~v~iSl 92 (298)
++. .+.|..+ |.-.+ +.++.+.++|++.|.+|.
T Consensus 208 ~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~ 249 (671)
T 1ps9_A 208 DFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGI 249 (671)
T ss_dssp SSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCC
Confidence 332 1233332 43333 346778888999999985
No 236
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=42.81 E-value=1.7e+02 Score=25.51 Aligned_cols=63 Identities=19% Similarity=0.291 Sum_probs=36.4
Q ss_pred HHHHHhCCCCEEEE--cCCccCccccHHHHHHHHhccC-CCCcEEEEeCccchHhhHHHHHHcCCCeEEEec
Q 022377 24 AYLFVTSGVDKIRL--TGGEPTVRKDIEEACFHLSKLK-GLKTLAMTTNGLTLARKLPKLKESGLTSVNISL 92 (298)
Q Consensus 24 i~~~~~~~~~~v~~--tGGEPll~~~~~~ii~~~~~~~-~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSl 92 (298)
++.+.+.|+..|.+ +.|.| +.+.+.++.+++.. ++. + +.-|. ...+.++.+.++|.|.|.+++
T Consensus 113 ~~~lieaGvd~I~idta~G~~---~~~~~~I~~ik~~~p~v~-V-i~G~v-~t~e~A~~a~~aGAD~I~vG~ 178 (366)
T 4fo4_A 113 VKALVEAGVDVLLIDSSHGHS---EGVLQRIRETRAAYPHLE-I-IGGNV-ATAEGARALIEAGVSAVKVGI 178 (366)
T ss_dssp HHHHHHTTCSEEEEECSCTTS---HHHHHHHHHHHHHCTTCE-E-EEEEE-CSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHhCCCCEEEEeCCCCCC---HHHHHHHHHHHHhcCCCc-e-Eeeee-CCHHHHHHHHHcCCCEEEEec
Confidence 34444556666666 34432 24557777777643 442 3 22222 224567778888999888854
No 237
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=42.75 E-value=1.1e+02 Score=26.44 Aligned_cols=62 Identities=15% Similarity=0.150 Sum_probs=42.6
Q ss_pred HHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEe
Q 022377 20 ILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 20 ~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iS 91 (298)
+...++.+.+.++..|.+++|.|. .++++.+++. ++. +....+ ..+.+..+.+.|.|.|.++
T Consensus 111 ~~~~~~~~~~~g~~~V~~~~g~~~-----~~~i~~~~~~-g~~-v~~~v~---t~~~a~~a~~~GaD~i~v~ 172 (369)
T 3bw2_A 111 YDAKLAVLLDDPVPVVSFHFGVPD-----REVIARLRRA-GTL-TLVTAT---TPEEARAVEAAGADAVIAQ 172 (369)
T ss_dssp HHHHHHHHHHSCCSEEEEESSCCC-----HHHHHHHHHT-TCE-EEEEES---SHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCc-----HHHHHHHHHC-CCe-EEEECC---CHHHHHHHHHcCCCEEEEe
Confidence 344566667788999999999883 4666777763 764 555432 1344667778899998883
No 238
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=42.51 E-value=62 Score=28.80 Aligned_cols=83 Identities=10% Similarity=0.070 Sum_probs=50.0
Q ss_pred HhhHHHHHHcCCCeEEEec------CCCCHHhhhhhcC-CCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCC--------
Q 022377 74 ARKLPKLKESGLTSVNISL------DTLVPAKFEFLTR-RKGHEKVMESINAAIEVGYNPVKVNCVVMRGFN-------- 138 (298)
Q Consensus 74 ~~~~~~l~~~~~~~v~iSl------dg~~~~~~~~ir~-~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n-------- 138 (298)
.+++..|++.|++.|.++= ++.+..-|..+.. -++.+...+-++.+++.|+ .|-+-.|+.- ..
T Consensus 39 ~~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi-~vilD~V~NH-~s~~~wF~~q 116 (424)
T 2dh2_A 39 KGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSI-RVILDLTPNY-RGENSWFSTQ 116 (424)
T ss_dssp HTTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTC-EEEEECCTTT-TSSSTTCSSC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCC-EEEEEECCCc-CCCccccccc
Confidence 3456666666666666551 1111111112221 2457888888899999999 8877777642 11
Q ss_pred ----HhHHHHHHHHHhhCCC-eeEE
Q 022377 139 ----DDEICDFVELTRDRPI-NIRF 158 (298)
Q Consensus 139 ----~~~i~~i~~~~~~~g~-~~~~ 158 (298)
.+++.+++.++.+.|+ ++|+
T Consensus 117 ~~~Vr~~~~~~~~~Wl~~gvDGfRl 141 (424)
T 2dh2_A 117 VDTVATKVKDALEFWLQAGVDGFQV 141 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 2457778887777888 4555
No 239
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=42.35 E-value=64 Score=26.03 Aligned_cols=73 Identities=10% Similarity=-0.036 Sum_probs=43.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCC
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLT 86 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~ 86 (298)
..++.+++.++.+.+.+.|+.-+.++..-......+.+.++.+... |...+.+.+....+.+..+...+.|+.
T Consensus 58 ~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~l-Ga~~v~~~~~~~~~~~l~~~a~~~gv~ 130 (262)
T 3p6l_A 58 FNLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAM-DLEFITCEPALSDWDLVEKLSKQYNIK 130 (262)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHT-TCSEEEECCCGGGHHHHHHHHHHHTCE
T ss_pred ccCCHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHc-CCCEEEecCCHHHHHHHHHHHHHhCCE
Confidence 3577888888888888888765555422112233467888888885 876444443322334444555555653
No 240
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=42.33 E-value=1.5e+02 Score=24.72 Aligned_cols=77 Identities=13% Similarity=0.195 Sum_probs=47.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcC-----CccCcccc-----HHHHHHHHhccCCCCcEEEEeCccchHhhH
Q 022377 8 LTPKPQLLSLNEILRLAYLFVTSGVDKIRLTG-----GEPTVRKD-----IEEACFHLSKLKGLKTLAMTTNGLTLARKL 77 (298)
Q Consensus 8 ~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tG-----GEPll~~~-----~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~ 77 (298)
|-..+...+.+...+-..++.+.|..-|.+.| |-+.+..+ +..+++.+++ .++. ++|.|-= .+.+
T Consensus 20 FsDGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~-~~v~-iSIDT~~---~~Va 94 (270)
T 4hb7_A 20 FSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG-FDVK-ISVDTFR---SEVA 94 (270)
T ss_dssp -------CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTT-SSSE-EEEECSC---HHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhc-CCCe-EEEECCC---HHHH
Confidence 44455667888888888888889988777743 22223222 5567777776 4774 8888743 4556
Q ss_pred HHHHHcCCCeEE
Q 022377 78 PKLKESGLTSVN 89 (298)
Q Consensus 78 ~~l~~~~~~~v~ 89 (298)
+.-.++|.+.|+
T Consensus 95 ~~al~aGa~iIN 106 (270)
T 4hb7_A 95 EACLKLGVDMIN 106 (270)
T ss_dssp HHHHHHTCCEEE
T ss_pred HHHHHhccceec
Confidence 667778988665
No 241
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=42.29 E-value=47 Score=27.03 Aligned_cols=54 Identities=13% Similarity=0.119 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhCCCCEEEEc-CCccCccccHHHHHHHHhccCCCCcEEEEeCccch
Q 022377 17 LNEILRLAYLFVTSGVDKIRLT-GGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 73 (298)
Q Consensus 17 ~e~~~~~i~~~~~~~~~~v~~t-GGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll 73 (298)
.+....+++.+. .|-..+.++ +|.|++..-..++++.+++ .++. +.+.-.-+..
T Consensus 70 ~~~~~~i~~~~~-~G~~Va~ls~~GdP~i~~~g~~l~~~l~~-~gi~-vevIPGiSs~ 124 (242)
T 1wyz_A 70 PEDISGYLKPLA-GGASMGVISEAGCPAVADPGADVVAIAQR-QKLK-VIPLVGPSSI 124 (242)
T ss_dssp HHHHHHHHHHHH-TTCCEEEECC-------CHHHHHHHHHHH-TTCC-EEECCCCCHH
T ss_pred HHHHHHHHHHHH-cCCEEEEEecCCCCcccCcHHHHHHHHHH-CCCC-EEEeCcHHHH
Confidence 344555666554 465666677 9999998777788888887 4885 8776554433
No 242
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=42.23 E-value=55 Score=28.74 Aligned_cols=83 Identities=16% Similarity=0.215 Sum_probs=52.3
Q ss_pred CCCCCCHHHHHHHHHHHH-------hCCCCEEEEcCCc---------cCcc-------------cc-HHHHHHHHhccCC
Q 022377 11 KPQLLSLNEILRLAYLFV-------TSGVDKIRLTGGE---------PTVR-------------KD-IEEACFHLSKLKG 60 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~-------~~~~~~v~~tGGE---------Pll~-------------~~-~~~ii~~~~~~~~ 60 (298)
...+||.+||..+++.+. +.|...|.+.+|- |..+ .. ..++++.+++.-+
T Consensus 153 ~p~~mt~~eI~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg 232 (376)
T 1icp_A 153 RPRRLTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIG 232 (376)
T ss_dssp CCEECCTTTHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhc
Confidence 346799999888876553 4688899998764 5532 22 3488888877423
Q ss_pred CCcEEEEeCc--c--------ch---HhhHHHHHHcCCCeEEEecC
Q 022377 61 LKTLAMTTNG--L--------TL---ARKLPKLKESGLTSVNISLD 93 (298)
Q Consensus 61 ~~~v~i~TNG--~--------ll---~~~~~~l~~~~~~~v~iSld 93 (298)
-..+.+--+. . -. .+.++.|.+.|++.|.+|--
T Consensus 233 ~~~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~ 278 (376)
T 1icp_A 233 SDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEP 278 (376)
T ss_dssp GGGEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECC
T ss_pred CCceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 1024443332 1 11 23567777889999999853
No 243
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=42.08 E-value=1e+02 Score=27.72 Aligned_cols=102 Identities=11% Similarity=0.173 Sum_probs=63.7
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccC------------------ccccHHHHHHHHhccC--CCCcEEEEeCccch
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPT------------------VRKDIEEACFHLSKLK--GLKTLAMTTNGLTL 73 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPl------------------l~~~~~~ii~~~~~~~--~~~~v~i~TNG~ll 73 (298)
.++.+++..+.+.+.+.|+..|.++++-.. +.+--.+++..+++.. ++. -|.+.|...
T Consensus 307 d~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP--VIg~GGI~s 384 (443)
T 1tv5_A 307 DLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP--IIASGGIFS 384 (443)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC--EEEESSCCS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc--EEEECCCCC
Confidence 367788999999999999999999875321 0111246777776643 443 354556555
Q ss_pred HhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHH-HHcCC
Q 022377 74 ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAA-IEVGY 124 (298)
Q Consensus 74 ~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l-~~~g~ 124 (298)
.+.+.+...+|.+.|++. +.-.+ .+..-+.++.+.++.+ .+.|+
T Consensus 385 ~~DA~e~l~aGAd~Vqig----rall~---~gP~l~~~i~~~l~~~l~~~G~ 429 (443)
T 1tv5_A 385 GLDALEKIEAGASVCQLY----SCLVF---NGMKSAVQIKRELNHLLYQRGY 429 (443)
T ss_dssp HHHHHHHHHTTEEEEEES----HHHHH---HGGGHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCEEEEc----HHHHh---cChHHHHHHHHHHHHHHHHhCC
Confidence 666666667898888876 22222 1222367777777664 44565
No 244
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=42.08 E-value=80 Score=26.81 Aligned_cols=74 Identities=23% Similarity=0.163 Sum_probs=53.6
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCccCc-------------cccHH-HHHHHHhccCCCCcEEEEeC-ccchH---hhH
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLTGGEPTV-------------RKDIE-EACFHLSKLKGLKTLAMTTN-GLTLA---RKL 77 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~tGGEPll-------------~~~~~-~ii~~~~~~~~~~~v~i~TN-G~ll~---~~~ 77 (298)
+++++.+..+.+.+. ...|.+.+|=|.- ++++. ++++.+++.-++. +.+-.. |...+ +.+
T Consensus 69 ~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~p-v~vKir~G~~~~~~~~~a 146 (318)
T 1vhn_A 69 EPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGK-FSVKTRLGWEKNEVEEIY 146 (318)
T ss_dssp CHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSE-EEEEEESCSSSCCHHHHH
T ss_pred CHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCC-EEEEecCCCChHHHHHHH
Confidence 468888888888888 8899998777653 34544 8899888754553 665544 43332 567
Q ss_pred HHHHHcCCCeEEEe
Q 022377 78 PKLKESGLTSVNIS 91 (298)
Q Consensus 78 ~~l~~~~~~~v~iS 91 (298)
+.+.++|++.|.|+
T Consensus 147 ~~l~~~G~d~i~v~ 160 (318)
T 1vhn_A 147 RILVEEGVDEVFIH 160 (318)
T ss_dssp HHHHHTTCCEEEEE
T ss_pred HHHHHhCCCEEEEc
Confidence 88889999999986
No 245
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=41.66 E-value=2e+02 Score=26.10 Aligned_cols=100 Identities=17% Similarity=0.174 Sum_probs=58.6
Q ss_pred HHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccC-CCCcEEEEeCccchHhhHHHHHHcCCCeEEEecCCCCHHhhh
Q 022377 23 LAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK-GLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKFE 101 (298)
Q Consensus 23 ~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~-~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSldg~~~~~~~ 101 (298)
.++.+.+.|+..|.+....|-. ..+.++++.+++.. ++. +.+ .|. ...+.++.+.++|.+.|.++.-....-...
T Consensus 235 ~a~~l~~aG~d~I~id~a~g~~-~~~~~~i~~ir~~~p~~~-Vi~-g~v-~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr 310 (496)
T 4fxs_A 235 RVKALVEAGVDVLLIDSSHGHS-EGVLQRIRETRAAYPHLE-IIG-GNV-ATAEGARALIEAGVSAVKVGIGPGSICTTR 310 (496)
T ss_dssp HHHHHHHTTCSEEEEECSCTTS-HHHHHHHHHHHHHCTTCC-EEE-EEE-CSHHHHHHHHHHTCSEEEECSSCCTTBCHH
T ss_pred HHHHHHhccCceEEeccccccc-hHHHHHHHHHHHHCCCce-EEE-ccc-CcHHHHHHHHHhCCCEEEECCCCCcCcccc
Confidence 3445556688888887554421 34668888888753 553 433 332 234678889999999999874221111111
Q ss_pred hhcC--CCcHHHHHHHHHHHHHcCCCCE
Q 022377 102 FLTR--RKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 102 ~ir~--~~~~~~v~~~i~~l~~~g~~~v 127 (298)
...+ .+.+..+.+..+.+.+.++ ++
T Consensus 311 ~~~g~g~p~~~~i~~v~~~~~~~~i-PV 337 (496)
T 4fxs_A 311 IVTGVGVPQITAIADAAGVANEYGI-PV 337 (496)
T ss_dssp HHHCCCCCHHHHHHHHHHHHGGGTC-CE
T ss_pred cccCCCccHHHHHHHHHHHhccCCC-eE
Confidence 2222 2346666666666666677 65
No 246
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=41.35 E-value=1.3e+02 Score=26.34 Aligned_cols=97 Identities=10% Similarity=0.127 Sum_probs=60.3
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++..++++.+.++++..+- ||+-..++ +-.+.+++..++ -|.+...+. .+.++++.+.+ ++.|++
T Consensus 224 ~~~~~~~a~~~~~~l~~~~i~~iE----~P~~~~~~-~~~~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~~~d~v~i 295 (407)
T 2o56_A 224 AFTDTTSAIQFGRMIEELGIFYYE----EPVMPLNP-AQMKQVADKVNI---PLAAGERIYWRWGYRPFLENGSLSVIQP 295 (407)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSCEE----CSSCSSSH-HHHHHHHHHCCS---CEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEe----CCCChhhH-HHHHHHHHhCCC---CEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 446778887888887777766554 67643333 333444443344 356666655 35666666654 565554
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
.+. ..+++..+++.++.+.++|+ ++.+
T Consensus 296 k~~-----------~~GGite~~~i~~~A~~~g~-~~~~ 322 (407)
T 2o56_A 296 DIC-----------TCGGITEVKKICDMAHVYDK-TVQI 322 (407)
T ss_dssp CTT-----------TTTHHHHHHHHHHHHHTTTC-EECC
T ss_pred Ccc-----------ccCCHHHHHHHHHHHHHcCC-eEee
Confidence 432 23568899999999999999 5443
No 247
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=41.24 E-value=73 Score=25.77 Aligned_cols=51 Identities=16% Similarity=0.187 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCc
Q 022377 18 NEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNG 70 (298)
Q Consensus 18 e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG 70 (298)
+.+.+.++.+..+|++.|.+..|...-...+.++.+.+.+ .|+. +.+.+-+
T Consensus 84 ~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~l~~l~~~a~~-~Gv~-l~lEn~~ 134 (264)
T 1yx1_A 84 PELEPTLRRAEACGAGWLKVSLGLLPEQPDLAALGRRLAR-HGLQ-LLVENDQ 134 (264)
T ss_dssp TTHHHHHHHHHHTTCSEEEEEEECCCSSCCHHHHHHHHTT-SSCE-EEEECCS
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHHHHHHHh-cCCE-EEEecCC
Confidence 4556666666666666665543322112245566666655 3663 6665544
No 248
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=40.77 E-value=73 Score=25.65 Aligned_cols=77 Identities=17% Similarity=0.046 Sum_probs=44.5
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEec
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISL 92 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSl 92 (298)
.++.+++.++.+.+.+.|+.-+.++..-+-....+.+.++.+.+. |...+.+.+....+.+..+...+.|+. +.+--
T Consensus 57 ~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~l-Ga~~v~~~p~~~~l~~l~~~a~~~gv~-l~lEn 133 (257)
T 3lmz_A 57 NSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRV-GVKLIVGVPNYELLPYVDKKVKEYDFH-YAIHL 133 (257)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHH-TCSEEEEEECGGGHHHHHHHHHHHTCE-EEEEC
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHh-CCCEEEecCCHHHHHHHHHHHHHcCCE-EEEec
Confidence 467788888888888888665444322111122356777777775 776555555433445555555565654 44443
No 249
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=40.46 E-value=1.5e+02 Score=25.84 Aligned_cols=97 Identities=12% Similarity=0.159 Sum_probs=67.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++ .|- ||+- ++ +.++.+++..++ -|.++.... .+.++++.+.+ ++.|+
T Consensus 197 n~~~~~~~a~~~~~~l~~~~i-~iE----qP~~--~~-~~~~~l~~~~~i---PIa~dE~~~~~~~~~~~l~~~~~d~v~ 265 (378)
T 3eez_A 197 NRGWTRQQALRVMRATEDLHV-MFE----QPGE--TL-DDIAAIRPLHSA---PVSVDECLVTLQDAARVARDGLAEVFG 265 (378)
T ss_dssp TTCCCHHHHHHHHHHTGGGTC-CEE----CCSS--SH-HHHHHTGGGCCC---CEEECTTCCSHHHHHHHHHTTCCSEEE
T ss_pred CCCCCHHHHHHHHHHhccCCe-EEe----cCCC--CH-HHHHHHHhhCCC---CEEECCCCCCHHHHHHHHHcCCCCEEE
Confidence 455788999899998888886 554 7876 44 334556554344 466787766 34667666654 78787
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNC 131 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~ 131 (298)
+.+.- -+++...++....+.++|+ ++.+..
T Consensus 266 ik~~~-----------~GGit~~~~ia~~A~~~g~-~~~~~~ 295 (378)
T 3eez_A 266 IKLNR-----------VGGLTRAARMRDIALTHGI-DMFVMA 295 (378)
T ss_dssp EEHHH-----------HTSHHHHHHHHHHHHHTTC-EEEEEC
T ss_pred eCchh-----------cCCHHHHHHHHHHHHHcCC-EEEcCC
Confidence 77521 2568889999999999999 665544
No 250
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=40.20 E-value=37 Score=29.26 Aligned_cols=56 Identities=16% Similarity=0.179 Sum_probs=40.7
Q ss_pred CCCHHHHHHHHHHHHhCCCC-EEEE-cCC--------ccCccccHHHHHHHHhccCCCCcEEEEeCcc
Q 022377 14 LLSLNEILRLAYLFVTSGVD-KIRL-TGG--------EPTVRKDIEEACFHLSKLKGLKTLAMTTNGL 71 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~-~v~~-tGG--------EPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ 71 (298)
-||.+|+.++.++..+.... .+.. ++. -|.+.|...++++++++. |+. +.|+|-+.
T Consensus 104 GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-G~~-v~ivSas~ 169 (327)
T 4as2_A 104 GFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMEN-GIE-VYVISAAH 169 (327)
T ss_dssp TSBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHT-TCE-EEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHC-CCE-EEEEeCCc
Confidence 48999999999988775421 2222 232 257888999999999995 995 88877763
No 251
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A
Probab=39.68 E-value=1.8e+02 Score=24.79 Aligned_cols=104 Identities=9% Similarity=0.123 Sum_probs=62.1
Q ss_pred cHHHHHHHHhccCCCCcEEEEeCcc----chH--h--------hHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHH
Q 022377 47 DIEEACFHLSKLKGLKTLAMTTNGL----TLA--R--------KLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKV 112 (298)
Q Consensus 47 ~~~~ii~~~~~~~~~~~v~i~TNG~----ll~--~--------~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v 112 (298)
++..-|+.+++. |.+ |.|+.-|. +.. . ....+..++++.|-|.+.+... .++.
T Consensus 62 ~~~~~I~~~q~~-G~k-VllSiGGa~Gs~~~~s~~~~~~~a~~~~~~i~~ygldGIDfDiE~~~~-----------~d~~ 128 (311)
T 2dsk_A 62 KFVDEVRELREI-GGE-VIIAFGGAVGPYLCQQASTPEQLAEWYIKVIDTYNATYLDFDIEAGID-----------ADKL 128 (311)
T ss_dssp GGHHHHHHHHTT-TCE-EEEEEEESSCCCHHHHCSSHHHHHHHHHHHHHHHTCSEEEEEECSCCC-----------HHHH
T ss_pred HHHHHHHHHHHC-CCe-EEEEecCCCCccccccccCHHHHHHHHHHHHHHhCCCcEEEeccCCcc-----------HHHH
Confidence 466888888884 885 88875443 221 1 1233444789999999998532 1466
Q ss_pred HHHHHHHHHcC--CCCEEEEEEEecC-CCHhHHHHHHHHHhhCCCeeEEEeeecCC
Q 022377 113 MESINAAIEVG--YNPVKVNCVVMRG-FNDDEICDFVELTRDRPINIRFIEFMPFD 165 (298)
Q Consensus 113 ~~~i~~l~~~g--~~~v~i~~vi~~~-~n~~~i~~i~~~~~~~g~~~~~~~~~p~~ 165 (298)
.+.|+.|++.+ . .+.+.+-..+. .+.+. .++++-+++.|+.+.++.+|.+.
T Consensus 129 ~~aL~~l~~~~p~~-~vs~TL~~~p~gl~~~g-~~~l~~a~~~g~~ld~VniM~~D 182 (311)
T 2dsk_A 129 ADALLIVQRERPWV-KFSFTLPSDPGIGLAGG-YGIIETMAKKGVRVDRVNPMTMD 182 (311)
T ss_dssp HHHHHHHHHHSTTC-EEEEEEEEETTTEESTH-HHHHHHHHHHTCCCCEEEEECCC
T ss_pred HHHHHHHHhhCCCc-EEEEEeccCCCCCCcch-HHHHHHHHHcCccccEEEEEeec
Confidence 67888887763 3 44443334441 12221 24566667777766677777654
No 252
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=39.60 E-value=1e+02 Score=26.33 Aligned_cols=59 Identities=15% Similarity=0.188 Sum_probs=32.8
Q ss_pred HHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEe
Q 022377 22 RLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 22 ~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iS 91 (298)
..++.+.+.++..|.+.+|+| .++++.+++. ++. +.... ...+.+..+.+.|.|.|.++
T Consensus 93 ~~~~~~~~~g~d~V~l~~g~p------~~~~~~l~~~-g~~-v~~~v---~s~~~a~~a~~~GaD~i~v~ 151 (326)
T 3bo9_A 93 DLVKVCIEEKVPVVTFGAGNP------TKYIRELKEN-GTK-VIPVV---ASDSLARMVERAGADAVIAE 151 (326)
T ss_dssp HHHHHHHHTTCSEEEEESSCC------HHHHHHHHHT-TCE-EEEEE---SSHHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHCCCCEEEECCCCc------HHHHHHHHHc-CCc-EEEEc---CCHHHHHHHHHcCCCEEEEE
Confidence 344444556666777777766 2445555553 553 43321 11344566677788877664
No 253
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=39.57 E-value=1.7e+02 Score=25.79 Aligned_cols=140 Identities=8% Similarity=0.036 Sum_probs=82.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCc------cc-cHHHHHHHHhcc--CCCCcEEEEeCccch-Hh---hHHHH
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTV------RK-DIEEACFHLSKL--KGLKTLAMTTNGLTL-AR---KLPKL 80 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll------~~-~~~~ii~~~~~~--~~~~~v~i~TNG~ll-~~---~~~~l 80 (298)
..++|++.+.++++.+.|.+.+.+.|.++.- .. +-.+.++.+++. .++ .+.+.-|+... ++ .++.|
T Consensus 123 ~~~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~-~L~vDaN~~~~~~~A~~~~~~L 201 (405)
T 3rr1_A 123 GDRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTV-EFGLDFHGRVSAPMAKVLIKEL 201 (405)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGS-EEEEECCSCBCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhCCCc-eEEEECCCCCCHHHHHHHHHHH
Confidence 3578898888888888999999996654321 11 134667777764 356 48899998665 33 35667
Q ss_pred HHcCCCeEEEecCCCCHHhhhhhcCC--------CcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhC
Q 022377 81 KESGLTSVNISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDR 152 (298)
Q Consensus 81 ~~~~~~~v~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~ 152 (298)
.+.++.++.=.+...+.+.+..++.. .+.. ....++.+.+.+...+ ++.-+++-=-..+..++++++...
T Consensus 202 ~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~i~-~~~~~~~~l~~~a~d~-v~~d~~~~GGitea~kia~lA~~~ 279 (405)
T 3rr1_A 202 EPYRPLFIEEPVLAEQAETYARLAAHTHLPIAAGERMF-SRFDFKRVLEAGGVSI-LQPDLSHAGGITECVKIAAMAEAY 279 (405)
T ss_dssp GGGCCSCEECSSCCSSTHHHHHHHTTCSSCEEECTTCC-SHHHHHHHHHHCCCSE-ECCBTTTTTHHHHHHHHHHHHHTT
T ss_pred HhcCCCEEECCCCcccHHHHHHHHhcCCCCEEecCCcC-CHHHHHHHHHHhCCCe-EEEChhhcCCHHHHHHHHHHHHHc
Confidence 77788888766554344555555532 1111 1223344444443122 233222200256778888888888
Q ss_pred CCee
Q 022377 153 PINI 156 (298)
Q Consensus 153 g~~~ 156 (298)
|+.+
T Consensus 280 gi~v 283 (405)
T 3rr1_A 280 DVAL 283 (405)
T ss_dssp TCEE
T ss_pred CCEE
Confidence 8754
No 254
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=39.35 E-value=99 Score=26.02 Aligned_cols=133 Identities=14% Similarity=0.158 Sum_probs=83.8
Q ss_pred CHHHHHHHHHHHHhCCCCEEEE--cCCccCccccHHHHHHHHhccCCCCcEEEEeCccc-------------hHhhHHHH
Q 022377 16 SLNEILRLAYLFVTSGVDKIRL--TGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLT-------------LARKLPKL 80 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~--tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~l-------------l~~~~~~l 80 (298)
+.+++..+++...+.| ..|.| |.|- ||..=..+++.+++..+..-+++..|... +++.++.+
T Consensus 7 ~~~~l~~~~~~~r~~g-~~I~fVpTmG~--lH~GH~~LI~~a~~~a~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll 83 (283)
T 3ag6_A 7 TVKEMQHIVKAAKRSG-TTIGFIPTMGA--LHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELV 83 (283)
T ss_dssp CHHHHHHHHHHHHHTT-CCEEEEEECSS--CCHHHHHHHHHHHTTSSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC-CcEEEEECCcc--ccHHHHHHHHHHHHhCCEEEEEEeCChhhcCCccccccCCCCHHHHHHHH
Confidence 6778888888877766 45655 7554 99998899999988534222455555332 24578889
Q ss_pred HHcCCCeEEEecCCCCHHhhhh-h----------------cCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHH
Q 022377 81 KESGLTSVNISLDTLVPAKFEF-L----------------TRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEIC 143 (298)
Q Consensus 81 ~~~~~~~v~iSldg~~~~~~~~-i----------------r~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~ 143 (298)
.+.|+|.+-+ .+- ++.|.. . .+.+.|+-+..-+.+|...=. + -...+.. ....++.
T Consensus 84 ~~~GvD~vf~-p~~--~~myp~~f~~~v~~~~l~~~L~G~~rp~hF~GV~TVV~KLf~iV~-p--~~~~FG~-Kd~qql~ 156 (283)
T 3ag6_A 84 SEVGADIVFH-PAV--EDMYPGELGIDVKVGPLADVLEGAKRPGHFDGVVTVVNKLFNIVM-P--DYAYFGK-KDAQQLA 156 (283)
T ss_dssp HHHTCSEEEC-CCH--HHHSCSSCSEEEEECGGGSSTHHHHSTTHHHHHHHHHHHHHHHHC-C--SEEEEEG-GGHHHHH
T ss_pred HhCCCCEEEe-CCH--HHCCCCCceEEEeccccchhhccCCCCCeecchhhHhhhhcEEec-C--ceEEECC-CCccCHH
Confidence 9999996544 321 222211 0 112337888877777766411 1 1334444 3567888
Q ss_pred HHHHHHhhCCCeeEE
Q 022377 144 DFVELTRDRPINIRF 158 (298)
Q Consensus 144 ~i~~~~~~~g~~~~~ 158 (298)
-+.++..++++++..
T Consensus 157 ~l~~m~~dl~~~V~i 171 (283)
T 3ag6_A 157 IVEQMVKDFNHAVEI 171 (283)
T ss_dssp HHHHHHHHTTCCCEE
T ss_pred HHHHHHHHcCCeEEE
Confidence 888899999887655
No 255
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=39.01 E-value=1.4e+02 Score=24.05 Aligned_cols=66 Identities=15% Similarity=0.197 Sum_probs=36.7
Q ss_pred HHHHHHHHhCCCCEEEEcCCccC--ccccHH---HHHHHHhccCCCCcEEEEeCccchHhhHHHHH-HcCCCeEEEe
Q 022377 21 LRLAYLFVTSGVDKIRLTGGEPT--VRKDIE---EACFHLSKLKGLKTLAMTTNGLTLARKLPKLK-ESGLTSVNIS 91 (298)
Q Consensus 21 ~~~i~~~~~~~~~~v~~tGGEPl--l~~~~~---~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~-~~~~~~v~iS 91 (298)
.+.++.+.++|+.+|-=+||.|. ....+. +++++.. + ++.|.--|=+..+.+..+. ..|+..+..|
T Consensus 136 ~~ale~L~~lGv~rILTSG~~~~~~a~~g~~~L~~Lv~~a~---~--ri~Im~GgGV~~~Ni~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 136 KKSIDQLVALGFTRILLHGSSNGEPIIENIKHIKALVEYAN---N--RIEIMVGGGVTAENYQYICQETGVKQAHGT 207 (224)
T ss_dssp HHHHHHHHHTTCCEEEECSCSSCCCGGGGHHHHHHHHHHHT---T--SSEEEECSSCCTTTHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHcCCCEEECCCCCCCCcHHHHHHHHHHHHHhhC---C--CeEEEeCCCCCHHHHHHHHHhhCCCEEccc
Confidence 45577777788777776788876 444332 4444322 2 1333333323344555555 4677777765
No 256
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=38.98 E-value=1.1e+02 Score=23.86 Aligned_cols=65 Identities=15% Similarity=0.211 Sum_probs=44.1
Q ss_pred HHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEE-eCccchHhhHHHHHHcCCCeEEEe
Q 022377 23 LAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMT-TNGLTLARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 23 ~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~-TNG~ll~~~~~~l~~~~~~~v~iS 91 (298)
.++.+.+.|...|.+. ++|. ..++.++++.+++. ++. +.+. .+..-..+.++.+.+.|.+.|.+.
T Consensus 69 ~~~~~~~~Gad~v~v~-~~~~-~~~~~~~~~~~~~~-g~~-~~v~~~~~~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVL-GVTD-VLTIQSCIRAAKEA-GKQ-VVVDMICVDDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHHTTCSEEEEE-TTSC-HHHHHHHHHHHHHH-TCE-EEEECTTCSSHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHhcCCCEEEEe-CCCC-hhHHHHHHHHHHHc-CCe-EEEEecCCCCHHHHHHHHHHcCCCEEEEc
Confidence 4777788898888874 4442 23456888888885 874 6653 333233466788888899987775
No 257
>3le1_A Phosphotransferase system, HPR-related proteins; HPR PTS phosphotransfer, kinase; 1.51A {Thermoanaerobacter tengcongensis} SCOP: d.94.1.0 PDB: 3le3_A 3lnw_A 3lfg_A 3le5_A
Probab=38.93 E-value=87 Score=21.04 Aligned_cols=67 Identities=10% Similarity=0.140 Sum_probs=44.3
Q ss_pred cccc-HHHHHHHHhccCCCCcEEEEeCccchH-hhHHHHHHcCC---CeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHH
Q 022377 44 VRKD-IEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESGL---TSVNISLDTLVPAKFEFLTRRKGHEKVMESINA 118 (298)
Q Consensus 44 l~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll~-~~~~~l~~~~~---~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~ 118 (298)
||-. -..+++.+.+. .. .+.+..++...+ +.+-.+...++ +.|.|+.+|.+++ .+++.|..
T Consensus 14 LHARpAa~lv~~a~~f-~s-~I~i~~~~~~vnaKSim~lm~Lg~~~G~~i~i~a~G~De~------------~A~~~l~~ 79 (88)
T 3le1_A 14 LHARPAALFVQTASKF-SS-QIWVEKDNKKVNAKSIMGIMSLGVSQGNVVKLSAEGDDEE------------EAIKALVD 79 (88)
T ss_dssp SSHHHHHHHHHHHTTS-SS-EEEEEETTEEEETTCHHHHHHHCCCTTCEEEEEEESTTHH------------HHHHHHHH
T ss_pred CcHHHHHHHHHHHhhC-CC-eEEEEECCEEEehHhHHHHHhcCCCCCCEEEEEEeCCCHH------------HHHHHHHH
Confidence 4443 34777777774 66 488888876663 45555555454 4599999997654 56777777
Q ss_pred HHHcCC
Q 022377 119 AIEVGY 124 (298)
Q Consensus 119 l~~~g~ 124 (298)
+.+.++
T Consensus 80 l~~~~f 85 (88)
T 3le1_A 80 LIESKF 85 (88)
T ss_dssp HHHTTT
T ss_pred HHHhcc
Confidence 776654
No 258
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=38.87 E-value=65 Score=27.93 Aligned_cols=94 Identities=21% Similarity=0.186 Sum_probs=60.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++ .++++.+.++++..|- ||+-..++. -.+.+++..++ -|.+...+. ...++.+.+.+ .+.|++
T Consensus 191 ~~~~~~~-~~~~~~l~~~~i~~iE----qP~~~~d~~-~~~~l~~~~~i---pIa~dE~~~~~~~~~~~i~~~~~d~v~i 261 (369)
T 2zc8_A 191 SAYSLAN-LAQLKRLDELRLDYIE----QPLAYDDLL-DHAKLQRELST---PICLDESLTGAEKARKAIELGAGRVFNV 261 (369)
T ss_dssp TCCCGGG-HHHHHGGGGGCCSCEE----CCSCTTCSH-HHHHHHHHCSS---CEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCCCHHH-HHHHHHHHhCCCcEEE----CCCCcccHH-HHHHHHhhCCC---CEEEcCccCCHHHHHHHHHhCCCCEEEE
Confidence 3456777 7788888888877776 888543433 33334442344 466777655 34566666555 677776
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
.+. ..+++..+++.++.+.++|+ ++
T Consensus 262 k~~-----------~~GGit~~~~i~~~A~~~g~-~~ 286 (369)
T 2zc8_A 262 KPA-----------RLGGHGESLRVHALAESAGI-PL 286 (369)
T ss_dssp CHH-----------HHTSHHHHHHHHHHHHHTTC-CE
T ss_pred chh-----------hhCCHHHHHHHHHHHHHcCC-cE
Confidence 541 12568889999999999999 65
No 259
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=38.86 E-value=1.9e+02 Score=25.29 Aligned_cols=69 Identities=16% Similarity=0.154 Sum_probs=45.4
Q ss_pred HHHHHHHHHhCCCCEEEE--cCCccCccccHHHHHHHHhccC-CCCcEEEEeCccchHhhHHHHHHcCCCeEEEecCC
Q 022377 20 ILRLAYLFVTSGVDKIRL--TGGEPTVRKDIEEACFHLSKLK-GLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDT 94 (298)
Q Consensus 20 ~~~~i~~~~~~~~~~v~~--tGGEPll~~~~~~ii~~~~~~~-~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSldg 94 (298)
....++.+.+.|+..|.+ +-|.| ..+.++++.+++.. ++. +.+ -+. ...+.++.+.++|.+.|.++..+
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g~~---~~~~e~i~~ir~~~~~~p-viv-~~v-~~~~~a~~a~~~Gad~I~vg~~~ 225 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHGHS---TRIIELIKKIKTKYPNLD-LIA-GNI-VTKEAALDLISVGADCLKVGIGP 225 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSS---HHHHHHHHHHHHHCTTCE-EEE-EEE-CSHHHHHHHHTTTCSEEEECSSC
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCCh---HHHHHHHHHHHHHCCCCe-EEE-cCC-CcHHHHHHHHhcCCCEEEECCCC
Confidence 344455666778888887 34544 34568888888754 553 544 222 22467788889999999997644
No 260
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=38.84 E-value=2e+02 Score=25.10 Aligned_cols=99 Identities=16% Similarity=0.189 Sum_probs=66.6
Q ss_pred CCCCCCHHHHHHHHHHHHh--CCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CC
Q 022377 11 KPQLLSLNEILRLAYLFVT--SGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LT 86 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~--~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~ 86 (298)
.+.-.+.++..++++.+.+ +++..+- ||+-..++..+ +.+++..++ -|.++.++. ...+..+.+.+ ++
T Consensus 193 aN~~w~~~~A~~~~~~l~~~~~~l~~iE----eP~~~~d~~~~-~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~a~d 264 (379)
T 3r0u_A 193 ANQGWNLAQTKQFIEEINKYSLNVEIIE----QPVKYYDIKAM-AEITKFSNI---PVVADESVFDAKDAERVIDEQACN 264 (379)
T ss_dssp CTTCCCHHHHHHHHHHHHTSCCCEEEEE----CCSCTTCHHHH-HHHHHHCSS---CEEESTTCSSHHHHHHHHHTTCCS
T ss_pred CCCCcCHHHHHHHHHHHhhcCCCcEEEE----CCCCcccHHHH-HHHHhcCCC---CEEeCCccCCHHHHHHHHHcCCCC
Confidence 3456789999999999988 5555554 79776565444 344443354 466777666 34566776655 67
Q ss_pred eEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 87 SVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 87 ~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
.|++.+.- .+++...++....+.++|+ ++.+
T Consensus 265 ~v~~k~~~-----------~GGi~~~~~ia~~A~~~gi-~~~~ 295 (379)
T 3r0u_A 265 MINIKLAK-----------TGGILEAQKIKKLADSAGI-SCMV 295 (379)
T ss_dssp EEEECHHH-----------HTSHHHHHHHHHHHHHTTC-EEEE
T ss_pred EEEECccc-----------cCCHHHHHHHHHHHHHcCC-EEEE
Confidence 77766421 3568899999999999999 6544
No 261
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=38.83 E-value=1.9e+02 Score=24.97 Aligned_cols=119 Identities=13% Similarity=0.116 Sum_probs=76.3
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHc-CCCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKES-GLTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~-~~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++.. ++.+++..++ -|.+...+. ...++.+.+. .++.|+
T Consensus 192 N~~~~~~~A~~~~~~l~~~~i~~iE----qP~~~~~~~~-~~~l~~~~~i---PIa~dE~~~~~~~~~~~~~~~~~d~v~ 263 (368)
T 3q45_A 192 NQGWSVETAIETLTLLEPYNIQHCE----EPVSRNLYTA-LPKIRQACRI---PIMADESCCNSFDAERLIQIQACDSFN 263 (368)
T ss_dssp TTCBCHHHHHHHHHHHGGGCCSCEE----CCBCGGGGGG-HHHHHHTCSS---CEEESTTCCSHHHHHHHHHTTCCSEEE
T ss_pred CCCCChHHHHHHHHHHhhcCCCEEE----CCCChhHHHH-HHHHHhhCCC---CEEEcCCcCCHHHHHHHHHcCCCCeEE
Confidence 4557889998999999888877775 7886555433 3344443344 366677665 3456666664 477777
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCC
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRP 153 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g 153 (298)
+.+.- -+++..+++-++.+.++|+ ++.+.+.+ ...=.+...+.++...+
T Consensus 264 ~k~~~-----------~GGit~~~~i~~~A~~~gi-~~~~~~~~---es~i~~aa~~hlaaa~p 312 (368)
T 3q45_A 264 LKLSK-----------SAGITNALNIIRLAEQAHM-PVQVGGFL---ESRLGFTAAAHVALVSK 312 (368)
T ss_dssp ECTTT-----------TTSHHHHHHHHHHHHHTTC-CEEECCSS---CCHHHHHHHHHHHTTCT
T ss_pred echhh-----------cCCHHHHHHHHHHHHHcCC-cEEecCcc---ccHHHHHHHHHHHHcCC
Confidence 76532 3578899999999999999 76543321 12223445566665443
No 262
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=38.78 E-value=67 Score=25.97 Aligned_cols=76 Identities=20% Similarity=0.251 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHhCCCCEEEEc-CCccCc--c---------ccHHHHHHHHhccCCCCcEEEEe-Cc------cch--Hh
Q 022377 17 LNEILRLAYLFVTSGVDKIRLT-GGEPTV--R---------KDIEEACFHLSKLKGLKTLAMTT-NG------LTL--AR 75 (298)
Q Consensus 17 ~e~~~~~i~~~~~~~~~~v~~t-GGEPll--~---------~~~~~ii~~~~~~~~~~~v~i~T-NG------~ll--~~ 75 (298)
.+.+.+.++.+..+|+..|.+. |+-|-- . ..+.++.+++++ .|+. +.+.+ ++ ..+ .+
T Consensus 82 ~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~gv~-l~lE~~~~~~~~~~~~~~~~~ 159 (275)
T 3qc0_A 82 IDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARA-AGVP-LAIEPLHPMYAADRACVNTLG 159 (275)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHH-HTCC-EEECCCCGGGTTTTBSCCCHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHH-cCCE-EEEeECCCcccCCccccCCHH
Confidence 4677788888888998887775 544421 1 113456666666 4885 88886 33 222 23
Q ss_pred hH-HHHHHcCCCeEEEecCCC
Q 022377 76 KL-PKLKESGLTSVNISLDTL 95 (298)
Q Consensus 76 ~~-~~l~~~~~~~v~iSldg~ 95 (298)
.+ +.+...+- .+.+-+|..
T Consensus 160 ~~~~l~~~~~~-~vg~~~D~~ 179 (275)
T 3qc0_A 160 QALDICETLGP-GVGVAIDVY 179 (275)
T ss_dssp HHHHHHHHHCT-TEEEEEEHH
T ss_pred HHHHHHHHhCc-ccEEEEEhh
Confidence 33 33333344 688888763
No 263
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=38.73 E-value=1.8e+02 Score=24.57 Aligned_cols=126 Identities=14% Similarity=0.148 Sum_probs=74.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcC-----C-ccCccc-c---HHHHHHHHhccCCCCcEEEEeCccchHhhH
Q 022377 8 LTPKPQLLSLNEILRLAYLFVTSGVDKIRLTG-----G-EPTVRK-D---IEEACFHLSKLKGLKTLAMTTNGLTLARKL 77 (298)
Q Consensus 8 ~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tG-----G-EPll~~-~---~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~ 77 (298)
|.......+.+.+.+...++.+.|..-|.+.| | +|.--. + +..+++.+++..++. ++|.|-- .+.+
T Consensus 53 Fsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vp-iSIDT~~---~~V~ 128 (297)
T 1tx2_A 53 FSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLP-ISIDTYK---AEVA 128 (297)
T ss_dssp TCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSC-EEEECSC---HHHH
T ss_pred cccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCce-EEEeCCC---HHHH
Confidence 33344456778888888888889987777754 2 222212 2 344556666534775 9998853 3455
Q ss_pred HHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCC---------HhHHHHHHHH
Q 022377 78 PKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFN---------DDEICDFVEL 148 (298)
Q Consensus 78 ~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n---------~~~i~~i~~~ 148 (298)
+.-.++|.+ +.=|+.+.+. .+ +-++.+.++|. ++.+... +|.. .+.+.+.++.
T Consensus 129 ~aAl~aGa~-iINdvsg~~~-----------d~---~m~~~aa~~g~-~vVlmh~--~G~p~y~d~v~ev~~~l~~~i~~ 190 (297)
T 1tx2_A 129 KQAIEAGAH-IINDIWGAKA-----------EP---KIAEVAAHYDV-PIILMHN--RDNMNYRNLMADMIADLYDSIKI 190 (297)
T ss_dssp HHHHHHTCC-EEEETTTTSS-----------CT---HHHHHHHHHTC-CEEEECC--CSCCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCC-EEEECCCCCC-----------CH---HHHHHHHHhCC-cEEEEeC--CCCCCcchHHHHHHHHHHHHHHH
Confidence 555566888 4466666320 11 23455667888 6654443 2211 2457777888
Q ss_pred HhhCCCe
Q 022377 149 TRDRPIN 155 (298)
Q Consensus 149 ~~~~g~~ 155 (298)
+.+.|++
T Consensus 191 a~~~GI~ 197 (297)
T 1tx2_A 191 AKDAGVR 197 (297)
T ss_dssp HHHTTCC
T ss_pred HHHcCCC
Confidence 8888985
No 264
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=38.54 E-value=1.9e+02 Score=24.90 Aligned_cols=110 Identities=15% Similarity=0.092 Sum_probs=70.8
Q ss_pred CCCCHHHHHHHHHHH-----HhCCCCEEEEc----C------CccCcc----cc-HHHHHHHHhccCCCCcEEEEeCccc
Q 022377 13 QLLSLNEILRLAYLF-----VTSGVDKIRLT----G------GEPTVR----KD-IEEACFHLSKLKGLKTLAMTTNGLT 72 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~-----~~~~~~~v~~t----G------GEPll~----~~-~~~ii~~~~~~~~~~~v~i~TNG~l 72 (298)
..++.+.+.+.++.+ .++|...|.+= + |..... |+ +..+++++++ +|++ +.|-++...
T Consensus 21 ~~~~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~FP~Gl~~l~~~ih~-~Glk-~Giw~~~~~ 98 (362)
T 1uas_A 21 CGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHA-KGLK-LGIYSDAGS 98 (362)
T ss_dssp TCCCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHH-TTCE-EEEEEESSS
T ss_pred CCCCHHHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCCCCeeEChhccCccHHHHHHHHHH-CCCE-eEEEeeCCC
Confidence 358999999999999 77788888773 2 444333 33 8899999999 5996 887765321
Q ss_pred -------------hHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEE
Q 022377 73 -------------LARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV 133 (298)
Q Consensus 73 -------------l~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi 133 (298)
.++..+.+.+.|++.|-+..-... . ....+...+-.+.|.+.+- ++.+..+.
T Consensus 99 ~~~~~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~~~~-~-------~~~~~~y~~~~~al~~~~~-~i~~~~c~ 163 (362)
T 1uas_A 99 QTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDA-G-------RSVMERYTRMSNAMKTYGK-NIFFSLCE 163 (362)
T ss_dssp BCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEECCCCT-T-------CCHHHHHHHHHHHHHHHCT-TSEEEEES
T ss_pred ccccCCCCCchhHHHHHHHHHHHcCCCEEEECccCCC-C-------CCHHHHHHHHHHHHHhhCC-CcEEEecC
Confidence 234578888899999888775422 1 0112222233344556665 66665444
No 265
>3nd1_A Precorrin-6A synthase/COBF protein; methyltransferase, deacetylase, transferase; HET: SAH; 1.50A {Rhodobacter capsulatus}
Probab=38.51 E-value=27 Score=29.36 Aligned_cols=46 Identities=13% Similarity=0.055 Sum_probs=32.4
Q ss_pred HHhC-CCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch
Q 022377 27 FVTS-GVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 73 (298)
Q Consensus 27 ~~~~-~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll 73 (298)
..+. |-..+.+++|.|+++.-...+++.+.+..++. +.+.-.-+.+
T Consensus 119 ~l~~~G~~Va~l~~GDP~i~~~~~~l~~~l~~~~gi~-veviPGiSs~ 165 (275)
T 3nd1_A 119 HVPGLEGRVALLVWGDPSLYDSTLRIAERLKSRLPLT-TKVIPGITAI 165 (275)
T ss_dssp HCTTSCEEEEEEESBCTTSSCSHHHHHHTTTTTSSEE-EEEECCCCHH
T ss_pred HHHhCCCeEEEEeCCCCcccchHHHHHHHHHHhcCCC-EEEecCccHH
Confidence 3344 65566678999999999888998887623774 7775544433
No 266
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=38.51 E-value=1.4e+02 Score=26.04 Aligned_cols=97 Identities=14% Similarity=0.031 Sum_probs=60.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++..++++.+.++++..+- ||+-..++ +-.+.+++..++ -|.+.+.+. .+.++++.+.+ ++.|++
T Consensus 208 ~~~~~~~a~~~~~~l~~~~i~~iE----~P~~~~~~-~~~~~l~~~~~i---pIa~dE~~~~~~~~~~~i~~~~~d~v~i 279 (392)
T 2poz_A 208 GGLTTDETIRFCRKIGELDICFVE----EPCDPFDN-GALKVISEQIPL---PIAVGERVYTRFGFRKIFELQACGIIQP 279 (392)
T ss_dssp TCSCHHHHHHHHHHHGGGCEEEEE----CCSCTTCH-HHHHHHHHHCSS---CEEECTTCCHHHHHHHHHTTTCCSEECC
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE----CCCCcccH-HHHHHHHhhCCC---CEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 446788888888888777655443 67644343 333444443344 456677665 35667776654 565554
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
.+. ..+++..+++.++.+.++|+ ++.+
T Consensus 280 k~~-----------~~GGit~~~~i~~~A~~~g~-~~~~ 306 (392)
T 2poz_A 280 DIG-----------TAGGLMETKKICAMAEAYNM-RVAP 306 (392)
T ss_dssp CTT-----------TSSCHHHHHHHHHHHHTTTC-EECC
T ss_pred Ccc-----------ccCCHHHHHHHHHHHHHcCC-eEec
Confidence 332 23568889999999999998 5443
No 267
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=38.39 E-value=69 Score=27.08 Aligned_cols=55 Identities=13% Similarity=0.122 Sum_probs=37.0
Q ss_pred CHHH-HHHHHHHHHhCCCCEEEEc-CCccCccccHHHHHHHHhccCCCCcEEEEeCccch
Q 022377 16 SLNE-ILRLAYLFVTSGVDKIRLT-GGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 73 (298)
Q Consensus 16 ~~e~-~~~~i~~~~~~~~~~v~~t-GGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll 73 (298)
+.++ +..+++.+ +.|-..+.++ +|.|++..-..++++.+.+. |+. +.+.-.-+..
T Consensus 73 ~~~~~~~~li~~l-~~G~~Va~lsdaGdP~i~~~g~~lv~~~~~~-gi~-v~viPGiSA~ 129 (296)
T 3kwp_A 73 NTQERIPQLIAKL-KQGMQIAQVSDAGMPSISDPGHELVNACIDA-HIP-VVPLPGANAG 129 (296)
T ss_dssp THHHHHHHHHHHH-HTTCEEEEECSSBCTTSSHHHHHHHHHHHHT-TCC-EEECCCCCHH
T ss_pred chhhHhHHHHHHH-hcCceEEEeccCCCCCCCCCchHHHHHHHHc-CCC-eeeCCCcccc
Confidence 3344 34445444 4564566677 99999998778899999884 885 8776555443
No 268
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=38.17 E-value=1.1e+02 Score=24.63 Aligned_cols=77 Identities=16% Similarity=0.143 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCc-cC-cc-c--------cHHHHHHHHhccCCCCcEEEEeCccc---h--HhhHHHH
Q 022377 17 LNEILRLAYLFVTSGVDKIRLTGGE-PT-VR-K--------DIEEACFHLSKLKGLKTLAMTTNGLT---L--ARKLPKL 80 (298)
Q Consensus 17 ~e~~~~~i~~~~~~~~~~v~~tGGE-Pl-l~-~--------~~~~ii~~~~~~~~~~~v~i~TNG~l---l--~~~~~~l 80 (298)
.+.+.+.++.+..+|+..|.+.+|. |- .. . .+.++.+.+++ .|+. +.+.+-... + .+.+..+
T Consensus 83 ~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~gv~-l~lEn~~~~~~~~~~~~~~~~l 160 (278)
T 1i60_A 83 ITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEP-YGVK-IALEFVGHPQCTVNTFEQAYEI 160 (278)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGG-GTCE-EEEECCCCTTBSSCSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCE-EEEEecCCccchhcCHHHHHHH
Confidence 4566777788888888888776432 21 11 1 13345555555 4884 877765432 2 2333333
Q ss_pred -HHcCCCeEEEecCCC
Q 022377 81 -KESGLTSVNISLDTL 95 (298)
Q Consensus 81 -~~~~~~~v~iSldg~ 95 (298)
...+-..+.+-+|..
T Consensus 161 ~~~~~~~~~g~~~D~~ 176 (278)
T 1i60_A 161 VNTVNRDNVGLVLDSF 176 (278)
T ss_dssp HHHHCCTTEEEEEEHH
T ss_pred HHHhCCCCeeEEEEeE
Confidence 334445677877763
No 269
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=38.12 E-value=1.9e+02 Score=25.37 Aligned_cols=97 Identities=8% Similarity=0.019 Sum_probs=64.4
Q ss_pred CCCC-CHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchH-hhHHHHHHc-CCCeE
Q 022377 12 PQLL-SLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKES-GLTSV 88 (298)
Q Consensus 12 ~~~l-~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~-~~~~~l~~~-~~~~v 88 (298)
+.-. +.++..++++.+.++++..+- ||+-..++. -++.+++..+ +-|.+.....+ ..++++.+. .++.|
T Consensus 208 n~~~~~~~~A~~~~~~L~~~~i~~iE----eP~~~~~~~-~~~~l~~~~~---iPIa~dE~~~~~~~~~~~l~~~~~d~v 279 (394)
T 3mqt_A 208 LYRWTDWQKARWTFRQLEDIDLYFIE----ACLQHDDLI-GHQKLAAAIN---TRLCGAEMSTTRFEAQEWLEKTGISVV 279 (394)
T ss_dssp TTCCSCHHHHHHHHHHTGGGCCSEEE----SCSCTTCHH-HHHHHHHHSS---SEEEECTTCCHHHHHHHHHHHHCCSEE
T ss_pred CCCCCCHHHHHHHHHHHhhcCCeEEE----CCCCcccHH-HHHHHHhhCC---CCEEeCCCcCCHHHHHHHHHcCCCCeE
Confidence 3456 788888888888888877775 787644544 3444555334 44667776653 456666654 46766
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEE
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVK 128 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~ 128 (298)
++.+. ..+++..+++....+.++|+ ++.
T Consensus 280 ~~k~~-----------~~GGit~~~~ia~~A~~~gi-~~~ 307 (394)
T 3mqt_A 280 QSDYN-----------RCGGVTELLRIMDICEHHNA-QLM 307 (394)
T ss_dssp CCCTT-----------TSSCHHHHHHHHHHHHHHTC-EEC
T ss_pred ecCcc-----------ccCCHHHHHHHHHHHHHcCC-EEe
Confidence 55442 23568899999999999999 553
No 270
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=37.98 E-value=1.6e+02 Score=25.62 Aligned_cols=102 Identities=16% Similarity=0.212 Sum_probs=58.7
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCC---ccC-----------------ccccHHHHHHHHhccC--CCCcEEEEeCcc
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGG---EPT-----------------VRKDIEEACFHLSKLK--GLKTLAMTTNGL 71 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGG---EPl-----------------l~~~~~~ii~~~~~~~--~~~~v~i~TNG~ 71 (298)
.++.+++..+++.+.+.|+..|.+++. -+- +.+--.+++..+++.. .+. -+...|.
T Consensus 230 ~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ip--vI~~GGI 307 (367)
T 3zwt_A 230 DLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVP--IIGVGGV 307 (367)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSC--EEEESSC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCce--EEEECCC
Confidence 367778888888888888888888642 110 1111236666666643 343 2434454
Q ss_pred chHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHH-cCC
Q 022377 72 TLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIE-VGY 124 (298)
Q Consensus 72 ll~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~-~g~ 124 (298)
...+.+.++..+|.+.|++. +.-.+ .+..-+.++.+.++...+ .|+
T Consensus 308 ~s~~da~~~l~~GAd~V~vg----ra~l~---~gP~~~~~i~~~l~~~m~~~G~ 354 (367)
T 3zwt_A 308 SSGQDALEKIRAGASLVQLY----TALTF---WGPPVVGKVKRELEALLKEQGF 354 (367)
T ss_dssp CSHHHHHHHHHHTCSEEEES----HHHHH---HCTHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCEEEEC----HHHHh---cCcHHHHHHHHHHHHHHHHcCC
Confidence 44555655556788888887 22222 122236777777766443 455
No 271
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13
Probab=37.28 E-value=2.5e+02 Score=26.03 Aligned_cols=55 Identities=16% Similarity=0.124 Sum_probs=42.6
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc-C-----Ccc----CccccHHHHHHHHhccCCCCcEEEEeCc
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLT-G-----GEP----TVRKDIEEACFHLSKLKGLKTLAMTTNG 70 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~t-G-----GEP----ll~~~~~~ii~~~~~~~~~~~v~i~TNG 70 (298)
..+.+++.++++.+.+.|+..|.+- | |+- --.|++..+++++++ .|++ +.+-.+.
T Consensus 208 ~~te~~v~~~ad~~~~~G~~~~~IDdgW~~~~Gdw~~d~~kFP~lk~lvd~lh~-~Glk-~Giw~~P 272 (564)
T 1zy9_A 208 DLTWEETLKNLKLAKNFPFEVFQIDDAYEKDIGDWLVTRGDFPSVEEMAKVIAE-NGFI-PGIWTAP 272 (564)
T ss_dssp GCCHHHHHHHHHHGGGTTCSEEEECTTSEEETTEEEEECTTCCCHHHHHHHHHH-TTCE-EEEEECT
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEECcccccccCCcccCcccCCCHHHHHHHHHH-CCCE-EEEEeCC
Confidence 4689999999999999999888883 2 543 234677899999999 4996 8876654
No 272
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=37.27 E-value=1.8e+02 Score=24.19 Aligned_cols=133 Identities=17% Similarity=0.152 Sum_probs=75.0
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEc---CCccCccccHHHHHHHHhccC-CCCcEEEEeC------ccc-h-H-h---hHHH
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLT---GGEPTVRKDIEEACFHLSKLK-GLKTLAMTTN------GLT-L-A-R---KLPK 79 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~t---GGEPll~~~~~~ii~~~~~~~-~~~~v~i~TN------G~l-l-~-~---~~~~ 79 (298)
+.+++...++.+...+..-|-|- =.++-...++.+.+..+++.. ++. + |.|. |.. . + + .++.
T Consensus 50 ~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~P-i-I~T~Rt~~eGG~~~~~~~~~~~ll~~ 127 (276)
T 3o1n_A 50 TITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKP-L-LFTFRSAKEGGEQALTTGQYIDLNRA 127 (276)
T ss_dssp SHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSC-E-EEECCBGGGTCSBCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCC-E-EEEEEEhhhCCCCCCCHHHHHHHHHH
Confidence 56777777777766666655541 233333345667777777643 443 4 3333 221 1 2 2 2444
Q ss_pred HHHcC-CCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEec-CCCHhHHHHHHHHHhhCCCeeE
Q 022377 80 LKESG-LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVELTRDRPINIR 157 (298)
Q Consensus 80 l~~~~-~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~-~~n~~~i~~i~~~~~~~g~~~~ 157 (298)
..+.+ ++.|-|.+... ++ .+-+-++.+++.+. ++.++.--.. ....+++.++++-+.++|.++.
T Consensus 128 ~l~~g~~dyIDvEl~~~-~~------------~~~~l~~~a~~~~~-kvI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIv 193 (276)
T 3o1n_A 128 AVDSGLVDMIDLELFTG-DD------------EVKATVGYAHQHNV-AVIMSNHDFHKTPAAEEIVQRLRKMQELGADIP 193 (276)
T ss_dssp HHHHTCCSEEEEEGGGC-HH------------HHHHHHHHHHHTTC-EEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred HHhcCCCCEEEEECcCC-HH------------HHHHHHHHHHhCCC-EEEEEeecCCCCcCHHHHHHHHHHHHHcCCCEE
Confidence 55667 88888887653 22 22233444566676 6655543221 1245778888888888888765
Q ss_pred EEeeecC
Q 022377 158 FIEFMPF 164 (298)
Q Consensus 158 ~~~~~p~ 164 (298)
-+..+|.
T Consensus 194 Kia~~a~ 200 (276)
T 3o1n_A 194 KIAVMPQ 200 (276)
T ss_dssp EEEECCS
T ss_pred EEEecCC
Confidence 5555554
No 273
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=37.23 E-value=1.8e+02 Score=25.39 Aligned_cols=114 Identities=12% Similarity=0.049 Sum_probs=71.7
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEEecC
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNISLD 93 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~iSld 93 (298)
+.++..++++.+.++++..|- ||+-..++ +-.+.+++. ... +-|.+++.+. .+.++++.+.+ .+.|++.+.
T Consensus 207 ~~~~a~~~~~~l~~~~i~~iE----qP~~~~d~-~~~~~l~~~-~~~-iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 279 (401)
T 2hzg_A 207 DVEAAAARLPTLDAAGVLWLE----EPFDAGAL-AAHAALAGR-GAR-VRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCG 279 (401)
T ss_dssp CHHHHHTTHHHHHHTTCSEEE----CCSCTTCH-HHHHHHHTT-CCS-SEEEECTTCSSHHHHHHHHHHSCCSEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCEEE----CCCCccCH-HHHHHHHhh-CCC-CCEEecCCcCCHHHHHHHHHCCCCCEEEeCcc
Confidence 888988899999888887764 78744344 444455541 222 5677888776 35666666544 777776542
Q ss_pred CCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhC
Q 022377 94 TLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDR 152 (298)
Q Consensus 94 g~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~ 152 (298)
- .+++...++.++.+.++|+ .+.+. +. .+.-.+...+.++...
T Consensus 280 ~-----------~GGit~~~~i~~~A~~~g~-~~~~h---~~-es~i~~~a~~hlaaa~ 322 (401)
T 2hzg_A 280 R-----------IGGLGPAKRVADAAQARGI-TYVNH---TF-TSHLALSASLQPFAGL 322 (401)
T ss_dssp H-----------HTSHHHHHHHHHHHHHHTC-EEEEC---CC-SCHHHHHHHHGGGTTC
T ss_pred h-----------hCCHHHHHHHHHHHHHcCC-EEecC---CC-CcHHHHHHHHHHHHhC
Confidence 1 2568888999999999999 54433 11 2333344445555443
No 274
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=37.09 E-value=1.1e+02 Score=26.79 Aligned_cols=96 Identities=15% Similarity=0.075 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++..+-+.-++. .+-|.+.+.+. .+.++++.+.+ .+.|+
T Consensus 215 n~~~~~~~a~~~~~~l~~~~i~~iE----~P~~~~~~~~~~~l~~~~----~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ 286 (393)
T 2og9_A 215 NQQWDRPTAQRMCRIFEPFNLVWIE----EPLDAYDHEGHAALALQF----DTPIATGEMLTSAAEHGDLIRHRAADYLM 286 (393)
T ss_dssp TTCCCHHHHHHHHHHHGGGCCSCEE----CCSCTTCHHHHHHHHHHC----SSCEEECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred CCCCCHHHHHHHHHHHHhhCCCEEE----CCCCcccHHHHHHHHHhC----CCCEEeCCCcCCHHHHHHHHHCCCCCEEe
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
+.+.-. +++..+++.++.+.++|+ ++
T Consensus 287 ik~~~~-----------GGit~~~~i~~~A~~~gi-~~ 312 (393)
T 2og9_A 287 PDAPRV-----------GGITPFLKIASLAEHAGL-ML 312 (393)
T ss_dssp CCHHHH-----------TSHHHHHHHHHHHHHTTC-EE
T ss_pred eCcccc-----------CCHHHHHHHHHHHHHcCC-EE
No 275
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=36.96 E-value=1.5e+02 Score=23.16 Aligned_cols=61 Identities=23% Similarity=0.253 Sum_probs=37.3
Q ss_pred HHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEE
Q 022377 24 AYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNI 90 (298)
Q Consensus 24 i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~i 90 (298)
++.+.+.|+..|.++++++ ....++++.+++. +.. +.++.|.....+.++.+.. +.+.|-+
T Consensus 77 i~~~~~~gad~v~vh~~~~---~~~~~~~~~~~~~-g~~-i~~~~~~~t~~e~~~~~~~-~~d~vl~ 137 (220)
T 2fli_A 77 VEAFAQAGADIMTIHTEST---RHIHGALQKIKAA-GMK-AGVVINPGTPATALEPLLD-LVDQVLI 137 (220)
T ss_dssp HHHHHHHTCSEEEEEGGGC---SCHHHHHHHHHHT-TSE-EEEEECTTSCGGGGGGGTT-TCSEEEE
T ss_pred HHHHHHcCCCEEEEccCcc---ccHHHHHHHHHHc-CCc-EEEEEcCCCCHHHHHHHHh-hCCEEEE
Confidence 3555667888888887766 3455677777764 764 7776654433344444433 4676654
No 276
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=36.85 E-value=1.5e+02 Score=26.23 Aligned_cols=97 Identities=12% Similarity=0.099 Sum_probs=66.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++.. ++.+++..++ -|.+..... ...++.+.+.+ ++.|+
T Consensus 238 N~~~~~~~Ai~~~~~Le~~~i~~iE----eP~~~~d~~~-~~~l~~~~~i---PIa~dE~~~~~~~~~~li~~~a~D~v~ 309 (412)
T 3stp_A 238 YMGWNLDYAKRMLPKLAPYEPRWLE----EPVIADDVAG-YAELNAMNIV---PISGGEHEFSVIGCAELINRKAVSVLQ 309 (412)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEE----CCSCTTCHHH-HHHHHHTCSS---CEEECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE----CCCCcccHHH-HHHHHhCCCC---CEEeCCCCCCHHHHHHHHHcCCCCEEe
Confidence 4557899999999999998887775 7886445443 4555553344 466777766 45677777654 66555
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVK 128 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~ 128 (298)
+.+. ..+++..+++....+.++|+ ++.
T Consensus 310 ik~~-----------~~GGit~a~kia~~A~a~gi-~v~ 336 (412)
T 3stp_A 310 YDTN-----------RVGGITAAQKINAIAEAAQI-PVI 336 (412)
T ss_dssp CCHH-----------HHTHHHHHHHHHHHHHHHTC-CBC
T ss_pred cChh-----------hcCCHHHHHHHHHHHHHcCC-EEE
Confidence 5431 12568889999999999999 653
No 277
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=36.80 E-value=1e+02 Score=24.81 Aligned_cols=70 Identities=17% Similarity=0.118 Sum_probs=44.2
Q ss_pred HHHHHHHHHhCCCCEEEEcCCc--cCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEe
Q 022377 20 ILRLAYLFVTSGVDKIRLTGGE--PTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 20 ~~~~i~~~~~~~~~~v~~tGGE--Pll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iS 91 (298)
...+++.+.+.|+..|.++.-+ ........++++.+++..++. + +...|....+.++.+.+.|.+.|.+.
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ip-v-i~~Ggi~~~~~~~~~l~~Gad~V~ig 108 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLP-I-IASGGAGKMEHFLEAFLRGADKVSIN 108 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGCCSC-E-EEESCCCSHHHHHHHHHTTCSEECCS
T ss_pred HHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhCCCC-E-EEeCCCCCHHHHHHHHHcCCCeeehh
Confidence 3445666777899999886422 222233356777777654664 4 33444444577888889898877665
No 278
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=36.70 E-value=1.6e+02 Score=25.50 Aligned_cols=96 Identities=17% Similarity=0.311 Sum_probs=63.0
Q ss_pred CCCCHHHHHHHHHHH-HhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 13 QLLSLNEILRLAYLF-VTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~-~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
.-.+.++..++++.+ .++++ .+- ||+- ++ +..+.+++..+ +-|.+++.+. .+.++++.+.+ .+.|+
T Consensus 199 ~~~~~~~a~~~~~~l~~~~~i-~iE----~P~~--~~-~~~~~l~~~~~---iPI~~dE~~~~~~~~~~~i~~~~~d~v~ 267 (371)
T 2ps2_A 199 GKLSVETALRLLRLLPHGLDF-ALE----APCA--TW-RECISLRRKTD---IPIIYDELATNEMSIVKILADDAAEGID 267 (371)
T ss_dssp TBCCHHHHHHHHHHSCTTCCC-EEE----CCBS--SH-HHHHHHHTTCC---SCEEESTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CCcCHHHHHHHHHHHHhhcCC-cCc----CCcC--CH-HHHHHHHhhCC---CCEEeCCCcCCHHHHHHHHHhCCCCEEE
Confidence 446788888888888 77776 553 6875 43 34444554333 4467777665 34566665544 77777
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNC 131 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~ 131 (298)
+.+. ..+++...++.++.+.++|+ ++.+.+
T Consensus 268 ik~~-----------~~GGit~~~~i~~~A~~~g~-~~~~~~ 297 (371)
T 2ps2_A 268 LKIS-----------KAGGLTRGRRQRDICLAAGY-SVSVQE 297 (371)
T ss_dssp EEHH-----------HHTSHHHHHHHHHHHHHHTC-EEEEEC
T ss_pred echh-----------hcCCHHHHHHHHHHHHHcCC-eEEecC
Confidence 7542 12568889999999999999 665443
No 279
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=36.30 E-value=2e+02 Score=24.36 Aligned_cols=97 Identities=9% Similarity=0.091 Sum_probs=60.4
Q ss_pred hhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHH-cCCCCEEEEEEEecCCCHhHHHHHHHHHhhCC
Q 022377 75 RKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIE-VGYNPVKVNCVVMRGFNDDEICDFVELTRDRP 153 (298)
Q Consensus 75 ~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~-~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g 153 (298)
+.++.|...+.+.|+|. +|.. +..-+++++....+++ .|+ .+....+... .|..++.+++.-+.+.|
T Consensus 43 ~~~~~l~~l~p~fvsVT-~gag---------g~~r~~t~~~a~~i~~~~g~-~~v~Hltc~~-~~~~~l~~~L~~~~~~G 110 (304)
T 3fst_A 43 NSIDRLSSLKPKFVSVT-YGAN---------SGERDRTHSIIKGIKDRTGL-EAAPHLTCID-ATPDELRTIARDYWNNG 110 (304)
T ss_dssp HHHHHHHTTCCSEEEEC-CCTT---------SSCHHHHHHHHHHHHHHHCC-CEEEEEESTT-SCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhcCCCCEEEEe-eCCC---------CcchhHHHHHHHHHHHHhCC-CeeEEeecCC-CCHHHHHHHHHHHHHCC
Confidence 45788887788888887 3322 2235566776666654 799 7777766654 79999999999888999
Q ss_pred CeeEEEeee--cCCCCCCcccCCCCHHHHHHHHHHh
Q 022377 154 INIRFIEFM--PFDGNVWNVKKLVPYAEMLDTVVKK 187 (298)
Q Consensus 154 ~~~~~~~~~--p~~~~~~~~~~~~~~~e~~~~i~~~ 187 (298)
+. ....+. |.... ........++++.+++.
T Consensus 111 I~-nILaLrGDpp~~~---~~~~~~A~dLv~~ir~~ 142 (304)
T 3fst_A 111 IR-HIVALRGDLPPGS---GKPEMYASDLVTLLKEV 142 (304)
T ss_dssp CC-EEEEECCCCC---------CCCHHHHHHHHHHH
T ss_pred CC-EEEEecCCCCCCC---CCCCCCHHHHHHHHHHc
Confidence 84 122222 11111 12345567777777764
No 280
>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ...
Probab=36.19 E-value=61 Score=26.64 Aligned_cols=41 Identities=20% Similarity=0.171 Sum_probs=31.3
Q ss_pred CCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch
Q 022377 31 GVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 73 (298)
Q Consensus 31 ~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll 73 (298)
+-..+.+++|.|+++.-..++++.+.+. ++. +.+.-.-+.+
T Consensus 77 g~~V~~l~~GDP~i~~~~~~l~~~l~~~-gi~-veviPGiSs~ 117 (265)
T 2z6r_A 77 ENDVAFLTPGDPLVATTHAELRIRAKRA-GVE-SYVIHAPSIY 117 (265)
T ss_dssp TSCEEEEESBCTTSSSSTHHHHHHHHHT-TCC-EEEECCCCHH
T ss_pred CCcEEEEECCCCcCCCCHHHHHHHHHHC-CCc-EEEECChhHH
Confidence 5456677899999998777888888874 885 8887665544
No 281
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=36.18 E-value=1.9e+02 Score=24.14 Aligned_cols=128 Identities=12% Similarity=0.118 Sum_probs=78.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcC-----CccCcccc-----HHHHHHHHhccCCCCcEEEEeCccchHhh
Q 022377 7 DLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTG-----GEPTVRKD-----IEEACFHLSKLKGLKTLAMTTNGLTLARK 76 (298)
Q Consensus 7 ~~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tG-----GEPll~~~-----~~~ii~~~~~~~~~~~v~i~TNG~ll~~~ 76 (298)
+|-..+...+.+.+.+...++.+.|..-|.+.| |-+-+..+ +..+++.+++. ++. ++|.|-- .+.
T Consensus 18 SFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~~p-iSIDT~~---~~v 92 (280)
T 1eye_A 18 SFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GIT-VSIDTMR---ADV 92 (280)
T ss_dssp TTCSSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-TCC-EEEECSC---HHH
T ss_pred CcCCCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-CCE-EEEeCCC---HHH
Confidence 455566678999999999999999988888765 32222221 45666666654 775 9998754 355
Q ss_pred HHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEE-ecC---C------C-----HhH
Q 022377 77 LPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV-MRG---F------N-----DDE 141 (298)
Q Consensus 77 ~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi-~~~---~------n-----~~~ 141 (298)
++.-.++|.+ +.=|+.+...+ + +.++.+.++|. ++.+...- ++. . + .+.
T Consensus 93 a~aAl~aGa~-iINdvsg~~~d-----------~---~m~~~~a~~~~-~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~ 156 (280)
T 1eye_A 93 ARAALQNGAQ-MVNDVSGGRAD-----------P---AMGPLLAEADV-PWVLMHWRAVSADTPHVPVRYGNVVAEVRAD 156 (280)
T ss_dssp HHHHHHTTCC-EEEETTTTSSC-----------T---THHHHHHHHTC-CEEEECCCCSCTTCTTSCCCCSSHHHHHHHH
T ss_pred HHHHHHcCCC-EEEECCCCCCC-----------H---HHHHHHHHhCC-eEEEEcCCCCCcchhhcCcchhHHHHHHHHH
Confidence 6666677887 55566663200 1 23556678888 66554431 110 0 1 345
Q ss_pred HHHHHHHHhhCCCe
Q 022377 142 ICDFVELTRDRPIN 155 (298)
Q Consensus 142 i~~i~~~~~~~g~~ 155 (298)
+.+.++.+.+.|+.
T Consensus 157 l~~~i~~a~~~Gi~ 170 (280)
T 1eye_A 157 LLASVADAVAAGVD 170 (280)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCC
Confidence 67777888888985
No 282
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=36.16 E-value=2.2e+02 Score=24.89 Aligned_cols=97 Identities=9% Similarity=0.028 Sum_probs=65.1
Q ss_pred CCCC-CHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeE
Q 022377 12 PQLL-SLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSV 88 (298)
Q Consensus 12 ~~~l-~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v 88 (298)
+.-. +.++..++++.+.++++..+- ||+-..++. -++.+++..++. |.+..... ...++.+.+.+ ++.|
T Consensus 213 N~~~~~~~~A~~~~~~L~~~~i~~iE----eP~~~~d~~-~~~~l~~~~~iP---Ia~dE~~~~~~~~~~~l~~~~~d~v 284 (394)
T 3mkc_A 213 LYRFTDWYEVARLLNSIEDLELYFAE----ATLQHDDLS-GHAKLVENTRSR---ICGAEMSTTRFEAEEWITKGKVHLL 284 (394)
T ss_dssp TTCCCCHHHHHHHHHHTGGGCCSEEE----SCSCTTCHH-HHHHHHHHCSSC---BEECTTCCHHHHHHHHHHTTCCSEE
T ss_pred CCCCCCHHHHHHHHHHhhhcCCeEEE----CCCCchhHH-HHHHHHhhCCCC---EEeCCCCCCHHHHHHHHHcCCCCeE
Confidence 3456 888988899988888877775 787654543 344455533543 55677665 34667777654 6665
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEE
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVK 128 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~ 128 (298)
++.+.- -+++..+++....+.++|+ ++.
T Consensus 285 ~~k~~~-----------~GGit~~~~ia~~A~~~gi-~~~ 312 (394)
T 3mkc_A 285 QSDYNR-----------CGGLTELRRITEMATANNV-QVM 312 (394)
T ss_dssp CCCTTT-----------TTHHHHHHHHHHHHHHTTC-EEC
T ss_pred ecCccc-----------cCCHHHHHHHHHHHHHcCC-EEe
Confidence 554422 3568899999999999999 553
No 283
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=36.10 E-value=1.9e+02 Score=25.43 Aligned_cols=93 Identities=6% Similarity=-0.039 Sum_probs=55.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++..++++.+.++++..|. ||+- ++. -++.+++..++ -|.+..++. .+.++.+.+.+ ++.|++
T Consensus 222 ~~~~~~~A~~~~~~L~~~~i~~iE----~P~~--d~~-~~~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~~~d~v~~ 291 (409)
T 3go2_A 222 FNAKPEGYLKILRELADFDLFWVE----IDSY--SPQ-GLAYVRNHSPH---PISSCETLFGIREFKPFFDANAVDVAIV 291 (409)
T ss_dssp TCSCHHHHHHHHHHTTTSCCSEEE----CCCS--CHH-HHHHHHHTCSS---CEEECTTCCHHHHHHHHHHTTCCSEEEE
T ss_pred CCCCHHHHHHHHHHHhhcCCeEEE----eCcC--CHH-HHHHHHhhCCC---CEEeCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 446777777777777777766666 6752 332 23444443344 355666555 34566666554 666665
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVK 128 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~ 128 (298)
.+ . . +++..+++....+.++|+ ++.
T Consensus 292 k~-----~------~-GGit~~~~ia~~A~~~gi-~~~ 316 (409)
T 3go2_A 292 DT-----I------W-NGVWQSMKIAAFADAHDI-NVA 316 (409)
T ss_dssp CH-----H------H-HCHHHHHHHHHHHHHTTC-EEE
T ss_pred CC-----C------C-CCHHHHHHHHHHHHHcCC-EEe
Confidence 53 1 1 457788888888888888 654
No 284
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=36.01 E-value=1.6e+02 Score=25.35 Aligned_cols=50 Identities=22% Similarity=0.264 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHcCCCCEEEEEEEecC----------C----CHhHHHHHHHHHhhCCCeeEEE
Q 022377 110 EKVMESINAAIEVGYNPVKVNCVVMRG----------F----NDDEICDFVELTRDRPINIRFI 159 (298)
Q Consensus 110 ~~v~~~i~~l~~~g~~~v~i~~vi~~~----------~----n~~~i~~i~~~~~~~g~~~~~~ 159 (298)
+.+.+.++.|++.|.+.|.+.....+. . +.+.+..+++.++++|+.+.+-
T Consensus 53 ~~~~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l~ 116 (343)
T 3civ_A 53 DEARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLK 116 (343)
T ss_dssp HHHHHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhHHHHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 455689999999998666665443321 1 5778999999999999977553
No 285
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=35.89 E-value=1.5e+02 Score=26.08 Aligned_cols=97 Identities=15% Similarity=0.087 Sum_probs=57.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++..++++.+.++++..+- ||+-..++ +-.+.+++..++ -|.+.+.+. .+.++++.+.+ ++.|++
T Consensus 227 ~~~~~~~ai~~~~~l~~~~i~~iE----~P~~~~~~-~~~~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~~~d~v~i 298 (410)
T 2gl5_A 227 SLLGTNSAIQFAKAIEKYRIFLYE----EPIHPLNS-DNMQKVSRSTTI---PIATGERSYTRWGYRELLEKQSIAVAQP 298 (410)
T ss_dssp TCSCHHHHHHHHHHHGGGCEEEEE----CSSCSSCH-HHHHHHHHHCSS---CEEECTTCCTTHHHHHHHHTTCCSEECC
T ss_pred CCCCHHHHHHHHHHHHhcCCCeEE----CCCChhhH-HHHHHHHhhCCC---CEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 345777777777777776654443 67643333 333444442233 355666655 34566666554 565544
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
.+. ..+++..+++.++.+.++|+ ++.+
T Consensus 299 k~~-----------~~GGit~~~~ia~~A~~~gi-~~~~ 325 (410)
T 2gl5_A 299 DLC-----------LCGGITEGKKICDYANIYDT-TVQV 325 (410)
T ss_dssp CTT-----------TTTHHHHHHHHHHHHHTTTC-EECC
T ss_pred Ccc-----------ccCCHHHHHHHHHHHHHcCC-eEee
Confidence 432 23568888999999999998 5433
No 286
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=35.49 E-value=1.5e+02 Score=24.20 Aligned_cols=77 Identities=10% Similarity=0.069 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCC-------ccCcc-------ccHHHHHHHHhccCCCCcEEEEeC----ccch---Hh
Q 022377 17 LNEILRLAYLFVTSGVDKIRLTGG-------EPTVR-------KDIEEACFHLSKLKGLKTLAMTTN----GLTL---AR 75 (298)
Q Consensus 17 ~e~~~~~i~~~~~~~~~~v~~tGG-------EPll~-------~~~~~ii~~~~~~~~~~~v~i~TN----G~ll---~~ 75 (298)
.+.+.+.++.+..+|+..|.+..| .|... ..+.++++.+++ .|+. +.+.+. +.++ .+
T Consensus 103 ~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~-~Gv~-l~lE~~~~~~~~~~~~~~~ 180 (287)
T 3kws_A 103 MDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQ-HGTS-VIFEPLNRKECFYLRQVAD 180 (287)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHH-TTCC-EEECCCCTTTCSSCCCHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHH-cCCE-EEEEecCcccCcccCCHHH
Confidence 356778888888899998888543 22111 113455666666 4885 888864 2233 23
Q ss_pred hHHHHHHcCCCeEEEecCCC
Q 022377 76 KLPKLKESGLTSVNISLDTL 95 (298)
Q Consensus 76 ~~~~l~~~~~~~v~iSldg~ 95 (298)
..+.+...+-..+.+-+|..
T Consensus 181 ~~~ll~~v~~~~vg~~~D~~ 200 (287)
T 3kws_A 181 AASLCRDINNPGVRCMGDFW 200 (287)
T ss_dssp HHHHHHHHCCTTEEEEEEHH
T ss_pred HHHHHHHcCCCCeeEEeehH
Confidence 34444444556788888874
No 287
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=35.43 E-value=1e+02 Score=26.99 Aligned_cols=134 Identities=13% Similarity=0.039 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhcc--CCCCcEEEEeCccch-Hh---hHHHHHHcCCCeEE
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKL--KGLKTLAMTTNGLTL-AR---KLPKLKESGLTSVN 89 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~--~~~~~v~i~TNG~ll-~~---~~~~l~~~~~~~v~ 89 (298)
+.+++.+.+.++.+.|...|.+-.|.+-+ .. .++++.+++. .++. +.+.-|+... ++ .++.|.+.+++++.
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~-~~-~e~v~avr~a~g~d~~-l~vDan~~~~~~~a~~~~~~l~~~~i~~iE 240 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADD-GP-AAEIANLRQVLGPQAK-IAADMHWNQTPERALELIAEMQPFDPWFAE 240 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTT-CH-HHHHHHHHHHHCTTSE-EEEECCSCSCHHHHHHHHHHHGGGCCSCEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCCh-HH-HHHHHHHHHHhCCCCE-EEEECCCCCCHHHHHHHHHHHhhcCCCEEE
Confidence 78888888888888899988887443222 23 6777777663 3564 8899998654 33 45666677888877
Q ss_pred EecCCCCHHhhhhhcCC--------CcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCe
Q 022377 90 ISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPIN 155 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~ 155 (298)
=.+...+-+.+..++.. .++. ..+.++.+.+.+... .++.-+.+| ...+..++++++...|+.
T Consensus 241 qP~~~~d~~~~~~l~~~~~iPI~~dE~~~-~~~~~~~~i~~~~~d-~v~ik~~~G-Git~~~~i~~~A~~~g~~ 311 (388)
T 2nql_A 241 APVWTEDIAGLEKVSKNTDVPIAVGEEWR-THWDMRARIERCRIA-IVQPEMGHK-GITNFIRIGALAAEHGID 311 (388)
T ss_dssp CCSCTTCHHHHHHHHTSCCSCEEECTTCC-SHHHHHHHHTTSCCS-EECCCHHHH-CHHHHHHHHHHHHHHTCE
T ss_pred CCCChhhHHHHHHHHhhCCCCEEEeCCcC-CHHHHHHHHHcCCCC-EEEecCCCC-CHHHHHHHHHHHHHcCCe
Confidence 55544444555555531 1111 123444444444312 122222222 566777888888888775
No 288
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=35.36 E-value=81 Score=26.35 Aligned_cols=62 Identities=13% Similarity=0.090 Sum_probs=44.8
Q ss_pred HHHHHHHHhccCCCCcEEEEeCccch---------HhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHH
Q 022377 48 IEEACFHLSKLKGLKTLAMTTNGLTL---------ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESIN 117 (298)
Q Consensus 48 ~~~ii~~~~~~~~~~~v~i~TNG~ll---------~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~ 117 (298)
+.++++.+++. |+. +.|+|+|... .+.++.+++.|+. +.|+-|+-.++. -+..|+++++.++
T Consensus 207 ~~~il~~~~~~-g~~-lEiN~~~l~~~~~~~~yp~~~~~~~~~~~g~~-i~igSDAH~~~~-----vg~~~~~~~~~~~ 277 (283)
T 3dcp_A 207 FRVILALVKKR-DYE-LDFNTAGLFKPLCGETYPPKKIVTLASELQIP-FVYGSDSHGVQD-----IGRGYSTYCQKLE 277 (283)
T ss_dssp HHHHHHHHHHH-TCE-EEEECGGGGSTTCCSCBSCHHHHHHHHHTTCC-EEEECCBSSGGG-----TTTTHHHHHHHTC
T ss_pred HHHHHHHHHHc-CCE-EEEechHhcCCCCCCcCCHHHHHHHHHHcCCC-EEEEcCCCCHHH-----HhChHHHHHHHHh
Confidence 56888888885 885 9999988642 2467888888988 568888866542 1345888777653
No 289
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=35.27 E-value=2.2e+02 Score=24.70 Aligned_cols=98 Identities=13% Similarity=0.155 Sum_probs=65.4
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHc-CCCeE
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKES-GLTSV 88 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~-~~~~v 88 (298)
.+.-.+.++..++++.+.++++..|- ||+-..++..+- .+++..++ -|.++.++. ...+..+.+. .++.|
T Consensus 201 aN~~~~~~~A~~~~~~l~~~~i~~iE----qP~~~~d~~~~~-~l~~~~~i---pIa~dE~~~~~~~~~~~~~~~~~d~v 272 (382)
T 3dgb_A 201 VNQAWDEAVALRACRILGGNGIDLIE----QPISRNNRAGMV-RLNASSPA---PIMADESIECVEDAFNLAREGAASVF 272 (382)
T ss_dssp CTTCBCHHHHHHHHHHHHTTTCCCEE----CCBCTTCHHHHH-HHHHHCSS---CEEESTTCSSHHHHHHHHHHTCCSEE
T ss_pred CCCCCCHHHHHHHHHHHhhcCcCeee----CCCCccCHHHHH-HHHHhCCC---CEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 34557888999999999888877665 797655554443 34443355 355666655 3455666554 47777
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEE
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVK 128 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~ 128 (298)
++.+.- .+++...++....+.++|+ ++.
T Consensus 273 ~~k~~~-----------~GGit~~~~i~~~A~~~gi-~~~ 300 (382)
T 3dgb_A 273 ALKIAK-----------NGGPRATLRTAAIAEAAGI-GLY 300 (382)
T ss_dssp EECHHH-----------HTSHHHHHHHHHHHHHHTC-EEE
T ss_pred Eecccc-----------cCCHHHHHHHHHHHHHcCC-eEe
Confidence 776421 2568899999999999999 653
No 290
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=35.27 E-value=1.4e+02 Score=25.94 Aligned_cols=70 Identities=16% Similarity=0.218 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEc--CC---------ccCcccc-HHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHH
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLT--GG---------EPTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKE 82 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~t--GG---------EPll~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~ 82 (298)
-+.+++.+.+++..+.|...|.+. || .+.+.++ +..+++.+++. |+. +.+-..+. +.++...+
T Consensus 172 ~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~-g~~-v~~H~~~~---~~i~~al~ 246 (426)
T 2r8c_A 172 DGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGR-GTY-VLAHAYTP---AAIARAVR 246 (426)
T ss_dssp CSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHT-TCC-EEEEECSH---HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHc-CCE-EEEEeCCh---HHHHHHHH
Confidence 357888888887777776655553 42 2355555 55888988884 885 88777653 34566666
Q ss_pred cCCCeEE
Q 022377 83 SGLTSVN 89 (298)
Q Consensus 83 ~~~~~v~ 89 (298)
+|.+.+.
T Consensus 247 ~G~~~i~ 253 (426)
T 2r8c_A 247 CGVRTIE 253 (426)
T ss_dssp TTCSEEE
T ss_pred cCCCEEe
Confidence 7777554
No 291
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=35.21 E-value=2.3e+02 Score=24.92 Aligned_cols=98 Identities=15% Similarity=0.101 Sum_probs=66.9
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchH-hhHHHHHHcC-CCeE
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESG-LTSV 88 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~-~~~~~l~~~~-~~~v 88 (298)
.+.-.+.++..++++.+.++++..+- ||+-..++. -++.+++..++ -|.+.....+ ..++.+.+.+ ++.|
T Consensus 208 aN~~~~~~~A~~~~~~L~~~~i~~iE----eP~~~~d~~-~~~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~a~d~v 279 (412)
T 4e4u_A 208 THGQMVPSSAIRLAKRLEKYDPLWFE----EPVPPGQEE-AIAQVAKHTSI---PIATGERLTTKYEFHKLLQAGGASIL 279 (412)
T ss_dssp CCSCBCHHHHHHHHHHHGGGCCSEEE----CCSCSSCHH-HHHHHHHTCSS---CEEECTTCCHHHHHHHHHHTTCCSEE
T ss_pred CCCCCCHHHHHHHHHHhhhcCCcEEE----CCCChhhHH-HHHHHHhhCCC---CEEecCccCCHHHHHHHHHcCCCCEE
Confidence 34567889999999999888877776 787655543 44555553344 4667776663 4667776655 6655
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEE
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVK 128 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~ 128 (298)
++.+- ..+++..+++-...+.++|+ ++.
T Consensus 280 ~~d~~-----------~~GGit~~~kia~~A~~~gi-~v~ 307 (412)
T 4e4u_A 280 QLNVA-----------RVGGLLEAKKIATLAEVHYA-QIA 307 (412)
T ss_dssp CCCTT-----------TTTSHHHHHHHHHHHHHTTC-EEC
T ss_pred EeCcc-----------ccCCHHHHHHHHHHHHHcCC-EEE
Confidence 55432 23568899999999999999 653
No 292
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=35.20 E-value=1.5e+02 Score=25.99 Aligned_cols=84 Identities=15% Similarity=0.238 Sum_probs=51.6
Q ss_pred CCCCCCHHHHH-HHHHHH-------H-hCCCCEEEEcCCc---------cCc---------------cccH-HHHHHHHh
Q 022377 11 KPQLLSLNEIL-RLAYLF-------V-TSGVDKIRLTGGE---------PTV---------------RKDI-EEACFHLS 56 (298)
Q Consensus 11 ~~~~l~~e~~~-~~i~~~-------~-~~~~~~v~~tGGE---------Pll---------------~~~~-~~ii~~~~ 56 (298)
...+||.+||. .+++.+ . +.|...|.+.+|- |.. +..+ .++++.++
T Consensus 159 ~pr~lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr 238 (379)
T 3aty_A 159 VPEELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVC 238 (379)
T ss_dssp CCEECCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHH
T ss_pred CCccCCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHH
Confidence 34679999999 766544 4 6788889987654 332 1223 48888887
Q ss_pred ccCCCCcEEE--EeCc--------cchH---hhHHHHHHcCCCeEEEecCC
Q 022377 57 KLKGLKTLAM--TTNG--------LTLA---RKLPKLKESGLTSVNISLDT 94 (298)
Q Consensus 57 ~~~~~~~v~i--~TNG--------~ll~---~~~~~l~~~~~~~v~iSldg 94 (298)
+.-+-..+.+ ..+. .-.+ +.++.|.+.|++.|.+|.-+
T Consensus 239 ~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~ 289 (379)
T 3aty_A 239 DAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGD 289 (379)
T ss_dssp HHHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSC
T ss_pred HhcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCC
Confidence 6323111443 3332 1122 34677778899999998643
No 293
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=35.03 E-value=62 Score=29.13 Aligned_cols=61 Identities=15% Similarity=0.203 Sum_probs=42.7
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEc--C----------------------------------------CccCccccH
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLT--G----------------------------------------GEPTVRKDI 48 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~t--G----------------------------------------GEPll~~~~ 48 (298)
.++.++.+.++++|+.+..++...+.++ - |+.+-..++
T Consensus 18 aR~f~~~~~ik~~ID~mA~~KlN~lH~HltDdgwriei~~~pl~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~YT~~di 97 (442)
T 2yl5_A 18 GRKYFTLNQLKRIVDKASELGYSDVHLLLGNDGLRFLLDDMTITANGKTYASDDVKKAIIEGTKAYYDDPNGTALTQAEV 97 (442)
T ss_dssp TTSCCCHHHHHHHHHHHHHHTCCEEEEEEESSSBCBCCSCCCEEETTEEECHHHHHHHHHHHHHHHCCCTTCSCBCHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCcEEEEEEcCCCcceeccCCcceeceeecccccccccccCCccccccCCCCCCcCHHHH
Confidence 3568999999999999988776554432 1 233444568
Q ss_pred HHHHHHHhccCCCCcEE--EEeCccch
Q 022377 49 EEACFHLSKLKGLKTLA--MTTNGLTL 73 (298)
Q Consensus 49 ~~ii~~~~~~~~~~~v~--i~TNG~ll 73 (298)
.+|++|++++ ++. |. |.+=|...
T Consensus 98 ~eIv~YA~~r-gI~-VIPEID~PGH~~ 122 (442)
T 2yl5_A 98 TELIEYAKSK-DIG-LIPAINSPGHMD 122 (442)
T ss_dssp HHHHHHHHTT-TCE-EEEEEEESSSCH
T ss_pred HHHHHHHHHc-CCe-eeeecccchhHH
Confidence 8999999884 874 53 66767643
No 294
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=35.01 E-value=1.7e+02 Score=23.35 Aligned_cols=126 Identities=10% Similarity=0.078 Sum_probs=65.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEc-CCcc--Ccc-ccHHHHHHHHhccCCCCcEE-EEeCccc--------------hHh
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLT-GGEP--TVR-KDIEEACFHLSKLKGLKTLA-MTTNGLT--------------LAR 75 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~t-GGEP--ll~-~~~~~ii~~~~~~~~~~~v~-i~TNG~l--------------l~~ 75 (298)
++.++. ++.+.+.|...|.+. ...+ ++. .+..++.+.+.+ .|+. +. +.+...+ +.+
T Consensus 14 ~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~-~gl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (278)
T 1i60_A 14 SNLKLD---LELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQT-HHIK-PLALNALVFFNNRDEKGHNEIITEFKG 88 (278)
T ss_dssp CCHHHH---HHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHT-SSCE-EEEEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCHHHH---HHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHH-cCCC-eeeeccccccccCCHHHHHHHHHHHHH
Confidence 555554 566667899999998 6543 222 345677777777 4885 54 4332111 112
Q ss_pred hHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHH----cCCCCEEEEEEEec---CCCHhHHHHHHHH
Q 022377 76 KLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIE----VGYNPVKVNCVVMR---GFNDDEICDFVEL 148 (298)
Q Consensus 76 ~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~----~g~~~v~i~~vi~~---~~n~~~i~~i~~~ 148 (298)
.++.....|...|.+.. +..+. .......++.+.+.++.+.+ +|+ .+.+...-.. ..+.+++.++++-
T Consensus 89 ~i~~a~~lG~~~v~~~~-g~~~~---~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lEn~~~~~~~~~~~~~~~~l~~~ 163 (278)
T 1i60_A 89 MMETCKTLGVKYVVAVP-LVTEQ---KIVKEEIKKSSVDVLTELSDIAEPYGV-KIALEFVGHPQCTVNTFEQAYEIVNT 163 (278)
T ss_dssp HHHHHHHHTCCEEEEEC-CBCSS---CCCHHHHHHHHHHHHHHHHHHHGGGTC-EEEEECCCCTTBSSCSHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEec-CCCCC---CCCHHHHHHHHHHHHHHHHHHHHhcCC-EEEEEecCCccchhcCHHHHHHHHHH
Confidence 34444556888777732 21111 00001226667777766654 466 5555543221 1234555556555
Q ss_pred Hh
Q 022377 149 TR 150 (298)
Q Consensus 149 ~~ 150 (298)
+.
T Consensus 164 ~~ 165 (278)
T 1i60_A 164 VN 165 (278)
T ss_dssp HC
T ss_pred hC
Confidence 54
No 295
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=34.99 E-value=34 Score=28.63 Aligned_cols=70 Identities=11% Similarity=0.031 Sum_probs=42.2
Q ss_pred CCCCHHHHHHHHHHHHh--CCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeC--ccchHhhHHHHHHcCCC
Q 022377 13 QLLSLNEILRLAYLFVT--SGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTN--GLTLARKLPKLKESGLT 86 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~--~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TN--G~ll~~~~~~l~~~~~~ 86 (298)
..++.+++..+++.++- +....+-+.+.++ .+...+.++.+++. |+. +.+.|| |.........+...++.
T Consensus 7 ~~~~~~~~~~~~~~~k~i~~D~DGTL~~~~~~--~~~~~~~l~~l~~~-g~~-~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 7 ERLRGAALRDVLGRAQGVLFDCDGVLWNGERA--VPGAPELLERLARA-GKA-ALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp EECCHHHHHHHHHHCSEEEECSBTTTEETTEE--CTTHHHHHHHHHHT-TCE-EEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred hcCCHHHHHHHHhhCCEEEECCCCcEecCCcc--CcCHHHHHHHHHHC-CCe-EEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45788888777764321 1111111223333 35678889999884 985 999998 54445566777766554
No 296
>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, struc genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae}
Probab=34.75 E-value=47 Score=27.10 Aligned_cols=42 Identities=12% Similarity=0.108 Sum_probs=30.7
Q ss_pred CCCCEEEEcCCccCccccHHHHHHHHhccCC---CCcEEEEeCccch
Q 022377 30 SGVDKIRLTGGEPTVRKDIEEACFHLSKLKG---LKTLAMTTNGLTL 73 (298)
Q Consensus 30 ~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~---~~~v~i~TNG~ll 73 (298)
.|-..+.+++|.|+++.-..++++.+.+. + +. +.+.-.-+.+
T Consensus 101 ~g~~Vv~l~~GDP~iy~~~~~l~~~l~~~-g~~~i~-veviPGiSs~ 145 (251)
T 2npn_A 101 DDGAVAFLVWGDPSLYDSTLRIIEHMRNL-EDLHAD-VKVIPGITAV 145 (251)
T ss_dssp TTCEEEEEESBCTTSSCCHHHHHHHHHHH-HTCCEE-EEEECCCCHH
T ss_pred CCCeEEEEeCCCcccccCHHHHHHHHHhc-CCCCCc-EEEeCChhHH
Confidence 45456667899999998888888888774 4 64 7776555444
No 297
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=34.58 E-value=11 Score=29.97 Aligned_cols=107 Identities=15% Similarity=0.121 Sum_probs=63.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCCEEEEc--CCccCccccHHHHHHHHhccCCCCcEEEEeCcc-------c-h-HhhH
Q 022377 9 TPKPQLLSLNEILRLAYLFVTSGVDKIRLT--GGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGL-------T-L-ARKL 77 (298)
Q Consensus 9 ~~~~~~l~~e~~~~~i~~~~~~~~~~v~~t--GGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~-------l-l-~~~~ 77 (298)
..++.+-|.+.+..+++.+.+.++..|.+. -|+-- ..+.+.+ .++. +.++|.-. . + ++..
T Consensus 21 ~~~G~eNT~~tl~la~era~e~~Ik~iVVAS~sG~TA-----~k~~e~~---~~i~-lVvVTh~~GF~~pg~~e~~~e~~ 91 (201)
T 1vp8_A 21 NKPGRENTEETLRLAVERAKELGIKHLVVASSYGDTA-----MKALEMA---EGLE-VVVVTYHTGFVREGENTMPPEVE 91 (201)
T ss_dssp SSCSGGGHHHHHHHHHHHHHHHTCCEEEEECSSSHHH-----HHHHHHC---TTCE-EEEEECCTTSSSTTCCSSCHHHH
T ss_pred cCCCcccHHHHHHHHHHHHHHcCCCEEEEEeCCChHH-----HHHHHHh---cCCe-EEEEeCcCCCCCCCCCcCCHHHH
Confidence 445556667777788888888999988873 56521 2333333 3664 66777322 1 2 4568
Q ss_pred HHHHHcCCCeEEEe--cCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCC
Q 022377 78 PKLKESGLTSVNIS--LDTLVPAKFEFLTRRKGHEKVMESINAAIEVGY 124 (298)
Q Consensus 78 ~~l~~~~~~~v~iS--ldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~ 124 (298)
++|.+.|+..+.-+ +.|.+....+++-|....+-+-++++.+...|+
T Consensus 92 ~~L~~~G~~V~t~tH~lsgveR~is~kfGG~~p~eiiA~tLR~~fgqG~ 140 (201)
T 1vp8_A 92 EELRKRGAKIVRQSHILSGLERSISRKLGGVSRTEAIAEALRSLFGHGL 140 (201)
T ss_dssp HHHHHTTCEEEECCCTTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHH
T ss_pred HHHHhCCCEEEEEeccccchhHHHHHhcCCCCHHHHHHHHHHHHhcCCc
Confidence 89999998866543 445544444444444446666666664444444
No 298
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=34.51 E-value=81 Score=27.05 Aligned_cols=68 Identities=18% Similarity=0.155 Sum_probs=47.7
Q ss_pred HhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEE
Q 022377 55 LSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV 133 (298)
Q Consensus 55 ~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi 133 (298)
+.++ +.. + .+.||.- .+.++.|++.|+..|.|.+-. +|. .+...++.+++.++.++++|+ +|-+.+-.
T Consensus 15 ~e~~-g~~-~-~~~~G~~-~d~~~ilk~~G~N~VRi~~w~-~P~-----~g~~~~~~~~~~~~~A~~~Gl-kV~ld~Hy 82 (332)
T 1hjs_A 15 EERA-GVS-Y-KNTNGNA-QPLENILAANGVNTVRQRVWV-NPA-----DGNYNLDYNIAIAKRAKAAGL-GVYIDFHY 82 (332)
T ss_dssp HHHT-TCC-C-BCTTSCB-CCHHHHHHHTTCCEEEEEECS-SCT-----TCTTSHHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred HHHc-CCE-E-ECCCCCc-ccHHHHHHHCCCCEEEEeeee-CCC-----CCcCCHHHHHHHHHHHHHCCC-EEEEEecc
Confidence 4443 553 3 3345642 356778889999999998753 333 233469999999999999999 88777544
No 299
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=34.49 E-value=1.5e+02 Score=22.39 Aligned_cols=93 Identities=18% Similarity=0.208 Sum_probs=53.7
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcC-CccCccccHHHHHHHHhccCCCCcEEEEe-CccchHhhHHHHHHcCCCeEEEe
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTG-GEPTVRKDIEEACFHLSKLKGLKTLAMTT-NGLTLARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tG-GEPll~~~~~~ii~~~~~~~~~~~v~i~T-NG~ll~~~~~~l~~~~~~~v~iS 91 (298)
.++.+++.++++.+.+. +.|.+.| |--.. --..+...+.. .|.. +...+ ++..+...+..+.+ +--.|.||
T Consensus 23 ~l~~~~l~~~~~~i~~a--~~I~i~G~G~S~~--~a~~~~~~l~~-~g~~-~~~~~~~~~~~~~~~~~~~~-~d~~i~iS 95 (187)
T 3sho_A 23 QTQPEAIEAAVEAICRA--DHVIVVGMGFSAA--VAVFLGHGLNS-LGIR-TTVLTEGGSTLTITLANLRP-TDLMIGVS 95 (187)
T ss_dssp TCCHHHHHHHHHHHHHC--SEEEEECCGGGHH--HHHHHHHHHHH-TTCC-EEEECCCTHHHHHHHHTCCT-TEEEEEEC
T ss_pred hCCHHHHHHHHHHHHhC--CEEEEEecCchHH--HHHHHHHHHHh-cCCC-EEEecCCchhHHHHHhcCCC-CCEEEEEe
Confidence 46788888888888775 5888876 43221 11133333344 3764 66655 44433322222211 22346677
Q ss_pred cCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 92 LDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 92 ldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
.-|.+ ..+++.++.+++.|. ++
T Consensus 96 ~sG~t-------------~~~~~~~~~ak~~g~-~v 117 (187)
T 3sho_A 96 VWRYL-------------RDTVAALAGAAERGV-PT 117 (187)
T ss_dssp CSSCC-------------HHHHHHHHHHHHTTC-CE
T ss_pred CCCCC-------------HHHHHHHHHHHHCCC-CE
Confidence 66643 357888899999998 54
No 300
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=34.42 E-value=1.1e+02 Score=27.06 Aligned_cols=75 Identities=9% Similarity=-0.068 Sum_probs=49.3
Q ss_pred CCCHHHHHHHHHHHHhCC------CCEEEEcCCc-------cC--cccc--HHHHHHHHhccCCCCcEEEEeCccchHhh
Q 022377 14 LLSLNEILRLAYLFVTSG------VDKIRLTGGE-------PT--VRKD--IEEACFHLSKLKGLKTLAMTTNGLTLARK 76 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~------~~~v~~tGGE-------Pl--l~~~--~~~ii~~~~~~~~~~~v~i~TNG~ll~~~ 76 (298)
..+.++...+++.+.+.| +..|.+++|- |. +... ..++++.+++..++. +..||-+..+.
T Consensus 256 ~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iP---vi~~G~i~~~~ 332 (402)
T 2hsa_B 256 SNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGT---FICSGGYTREL 332 (402)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSC---EEEESSCCHHH
T ss_pred CCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCC---EEEeCCCCHHH
Confidence 356788888999998888 8999998762 21 1111 246667777654553 33444445566
Q ss_pred HHHHHHcC-CCeEEEe
Q 022377 77 LPKLKESG-LTSVNIS 91 (298)
Q Consensus 77 ~~~l~~~~-~~~v~iS 91 (298)
++++.+.+ .|.|.+.
T Consensus 333 a~~~l~~g~aD~V~ig 348 (402)
T 2hsa_B 333 GIEAVAQGDADLVSYG 348 (402)
T ss_dssp HHHHHHTTSCSEEEES
T ss_pred HHHHHHCCCCceeeec
Confidence 77777766 8888776
No 301
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=34.29 E-value=2.2e+02 Score=24.87 Aligned_cols=98 Identities=11% Similarity=0.088 Sum_probs=60.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcC-CCeEEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~-~~~v~i 90 (298)
+.-.+.++..++++.+.++++..+- ||+...+-.+-++.+++..++. +...=+-.. ...+..+.+.+ ++.+++
T Consensus 217 N~~~~~~~A~~~~~~l~~~~~~~iE----eP~~~~~d~~~~~~l~~~~~ip-Ia~dE~~~~-~~~~~~~i~~~a~d~i~~ 290 (388)
T 4h83_A 217 NQGYKPAVAVDLSRRIADLNIRWFE----EPVEWHNDKRSMRDVRYQGSVP-VCAGQTEFS-ASGCRDLMETGAIDVCNF 290 (388)
T ss_dssp TTCBCHHHHHHHHHHTTTSCCCCEE----SCBCSTTHHHHHHHHHHHSSSC-EEECTTCSS-HHHHHHHHHHTCCSEECC
T ss_pred CcCCCHHHHHHHHHHhhhcCcceee----cCcccccchHHHHHHHhhcCCC-ccCCccccC-hHhHHHHHHcCCCCeEee
Confidence 4556888888888888877766554 7886555445555555544664 543222222 23455555544 665555
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
.+. ..+++..+++-...+..+|+ .+
T Consensus 291 d~~-----------~~GGit~~~kia~~A~~~gv-~v 315 (388)
T 4h83_A 291 DSS-----------WSGGPTAWLRTAAIATSYDV-QM 315 (388)
T ss_dssp CGG-----------GTTCHHHHHHHHHHHHHTTC-EE
T ss_pred cce-----------eCCCHHHHHHHHHHHHHCCC-EE
Confidence 432 23567888888888888888 54
No 302
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=33.93 E-value=2.4e+02 Score=24.59 Aligned_cols=96 Identities=14% Similarity=0.101 Sum_probs=66.5
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchH-hhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~-~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++..+ +.+++..++ -|.++....+ ..++.+.+.+ ++.|+
T Consensus 221 N~~~~~~~A~~~~~~l~~~~i~~iE----eP~~~~d~~~~-~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~a~d~v~ 292 (383)
T 3toy_A 221 NQSLDPAEATRRIARLADYDLTWIE----EPVPQENLSGH-AAVRERSEI---PIQAGENWWFPRGFAEAIAAGASDFIM 292 (383)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEE----CCSCTTCHHHH-HHHHHHCSS---CEEECTTCCHHHHHHHHHHHTCCSEEC
T ss_pred CCCCCHHHHHHHHHHHHhhCCCEEE----CCCCcchHHHH-HHHHhhcCC---CEEeCCCcCCHHHHHHHHHcCCCCEEE
Confidence 4567889999999999988877775 79866565443 445543354 3667776653 4566666544 67666
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
+.+. ..+++...++....+.++|+ ++
T Consensus 293 ik~~-----------~~GGit~~~~ia~~A~~~gi-~~ 318 (383)
T 3toy_A 293 PDLM-----------KVGGITGWLNVAGQADAASI-PM 318 (383)
T ss_dssp CCTT-----------TTTHHHHHHHHHHHHHHHTC-CB
T ss_pred eCcc-----------ccCCHHHHHHHHHHHHHcCC-EE
Confidence 5542 23568899999999999999 65
No 303
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=33.89 E-value=1.3e+02 Score=25.38 Aligned_cols=73 Identities=21% Similarity=0.300 Sum_probs=50.1
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc-----C---CccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLT-----G---GEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG 84 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~t-----G---GEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~ 84 (298)
.-++|+..+++++ .|+..+..+ | |+|-|+++..+-++.. .++. +.+ --|+-+ ++.+++..+.|
T Consensus 154 ~T~Peea~~Fv~~---TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~---~~vp-LVl-HGgSG~~~e~i~~ai~~G 225 (286)
T 1gvf_A 154 LTDPQEAKRFVEL---TGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREV---VDVP-LVL-HGASDVPDEFVRRTIELG 225 (286)
T ss_dssp SCCHHHHHHHHHH---HCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHH---CCSC-EEE-CCCTTCCHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHH---HCCCEEEeecCccccCcCCCCccCHHHHHHHHHh---cCCC-EEE-ECCCCCCHHHHHHHHHCC
Confidence 4678888888774 467776664 3 7898888866444433 2454 433 444445 67899999999
Q ss_pred CCeEEEecCC
Q 022377 85 LTSVNISLDT 94 (298)
Q Consensus 85 ~~~v~iSldg 94 (298)
+..|+|+-|.
T Consensus 226 v~KiNi~Tdl 235 (286)
T 1gvf_A 226 VTKVNVATEL 235 (286)
T ss_dssp EEEEEECHHH
T ss_pred CeEEEEChHH
Confidence 9999998665
No 304
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=33.86 E-value=1.9e+02 Score=25.19 Aligned_cols=136 Identities=14% Similarity=0.176 Sum_probs=81.8
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhcc--CCCCcEEEEeCccch-Hh---hHHHHHHcCCCeE
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKL--KGLKTLAMTTNGLTL-AR---KLPKLKESGLTSV 88 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~--~~~~~v~i~TNG~ll-~~---~~~~l~~~~~~~v 88 (298)
.+.+++.+.+.++.+.|...|.+-.|..+ ....++++.+++. .++. +.+.-|+... ++ .++.|.+.+++++
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~--~~~~e~v~avR~a~g~d~~-l~vDan~~~~~~~a~~~~~~l~~~~i~~i 220 (397)
T 2qde_A 144 GEPEAVAEEALAVLREGFHFVKLKAGGPL--KADIAMVAEVRRAVGDDVD-LFIDINGAWTYDQALTTIRALEKYNLSKI 220 (397)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEEECCSCH--HHHHHHHHHHHHHHCTTSC-EEEECTTCCCHHHHHHHHHHHGGGCCSCE
T ss_pred CCHHHHHHHHHHHHHhhhhheeecccCCH--HHHHHHHHHHHHhhCCCCE-EEEECCCCCCHHHHHHHHHHHHhCCCCEE
Confidence 36788877777777788888888755321 1234677777663 3574 8999998654 33 3566667788887
Q ss_pred EEecCCCCHHhhhhhcCC--------CcHHHHHHHHHHHHHcCCCCEEEEEEEec-CCCHhHHHHHHHHHhhCCCee
Q 022377 89 NISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~vi~~-~~n~~~i~~i~~~~~~~g~~~ 156 (298)
.=.+...+.+.+..++.. .++.. ...++.+.+.+... .++.-+.+ | -..+..++++++...|+.+
T Consensus 221 EqP~~~~~~~~~~~l~~~~~iPIa~dE~~~~-~~~~~~~i~~~~~d-~v~ik~~~~G-Git~~~~i~~~A~~~g~~~ 294 (397)
T 2qde_A 221 EQPLPAWDLDGMARLRGKVATPIYADESAQE-LHDLLAIINKGAAD-GLMIKTQKAG-GLLKAQRWLTLARLANLPV 294 (397)
T ss_dssp ECCSCTTCHHHHHHHHTTCSSCEEESTTCCS-HHHHHHHHHHTCCS-EEEECHHHHT-SHHHHHHHHHHHHHHTCCE
T ss_pred ECCCChhhHHHHHHHHhhCCCCEEEeCCcCC-HHHHHHHHHcCCCC-EEEEeccccC-CHHHHHHHHHHHHHcCCeE
Confidence 755554445555565532 11211 33445555544312 22332222 2 4677788999999888864
No 305
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=33.81 E-value=1.6e+02 Score=26.11 Aligned_cols=73 Identities=10% Similarity=0.038 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHHHh-CCCCEEEEcCCcc--------Ccccc-HHHHHHHHhccC--CCCcEEEEeCccch-HhhHHHHH
Q 022377 15 LSLNEILRLAYLFVT-SGVDKIRLTGGEP--------TVRKD-IEEACFHLSKLK--GLKTLAMTTNGLTL-ARKLPKLK 81 (298)
Q Consensus 15 l~~e~~~~~i~~~~~-~~~~~v~~tGGEP--------ll~~~-~~~ii~~~~~~~--~~~~v~i~TNG~ll-~~~~~~l~ 81 (298)
++.++...+++.+.+ .|+..|.+++|.- ...+. ..++++.+++.. ++. +..||-+. .+.++++.
T Consensus 261 ~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iP---VI~~GgI~t~e~Ae~~L 337 (419)
T 3l5a_A 261 YTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIP---LIASGGINSPESALDAL 337 (419)
T ss_dssp ECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSC---EEECSSCCSHHHHHHHG
T ss_pred CCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCe---EEEECCCCCHHHHHHHH
Confidence 578999999999999 9999999997642 11111 113344444421 343 44555443 66777777
Q ss_pred HcCCCeEEEe
Q 022377 82 ESGLTSVNIS 91 (298)
Q Consensus 82 ~~~~~~v~iS 91 (298)
+. .|.|.+.
T Consensus 338 ~~-aDlVaiG 346 (419)
T 3l5a_A 338 QH-ADMVGMS 346 (419)
T ss_dssp GG-CSEEEES
T ss_pred Hh-CCcHHHH
Confidence 77 8888776
No 306
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=33.66 E-value=80 Score=27.57 Aligned_cols=23 Identities=4% Similarity=-0.151 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcC
Q 022377 17 LNEILRLAYLFVTSGVDKIRLTG 39 (298)
Q Consensus 17 ~e~~~~~i~~~~~~~~~~v~~tG 39 (298)
.++...+++.+.+.|+..|.+++
T Consensus 249 ~~~~~~la~~l~~~Gvd~i~v~~ 271 (361)
T 3gka_A 249 AATFGHVARELGRRRIAFLFARE 271 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEECC
Confidence 34444445555455555555543
No 307
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=33.65 E-value=1e+02 Score=24.72 Aligned_cols=41 Identities=17% Similarity=0.173 Sum_probs=20.2
Q ss_pred HHHHHHHHhCCCCEEEEcCCccC------ccccHHHHHHHHhccCCCC
Q 022377 21 LRLAYLFVTSGVDKIRLTGGEPT------VRKDIEEACFHLSKLKGLK 62 (298)
Q Consensus 21 ~~~i~~~~~~~~~~v~~tGGEPl------l~~~~~~ii~~~~~~~~~~ 62 (298)
.++-+.+.+.|+.-..++..-|+ ....+.+.++.+.+. |..
T Consensus 54 ~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l-G~~ 100 (272)
T 2q02_A 54 NQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGV-GAR 100 (272)
T ss_dssp HHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHH-TCS
T ss_pred HHHHHHHHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHh-CCC
Confidence 33344444566554444421121 223455777777774 765
No 308
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=33.23 E-value=1.8e+02 Score=25.04 Aligned_cols=120 Identities=13% Similarity=0.182 Sum_probs=74.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHc-CCCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKES-GLTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~-~~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++..+ +.+++..+ +-|.++.... .+.++.+.+. ..+.|+
T Consensus 191 n~~~~~~~a~~~~~~L~~~~i~~iE----qP~~~~d~~~~-~~l~~~~~---iPIa~dE~~~~~~~~~~~l~~~~~d~v~ 262 (354)
T 3jva_A 191 NQAWTPKDAVKAIQALADYQIELVE----QPVKRRDLEGL-KYVTSQVN---TTIMADESCFDAQDALELVKKGTVDVIN 262 (354)
T ss_dssp TTCSCHHHHHHHHHHTTTSCEEEEE----CCSCTTCHHHH-HHHHHHCS---SEEEESTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE----CCCChhhHHHH-HHHHHhCC---CCEEEcCCcCCHHHHHHHHHcCCCCEEE
Confidence 3456888888888888877765554 78876565443 44544334 4466777665 3456666554 477777
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCC
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRP 153 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g 153 (298)
+.+.- -+++...++.++.+.++|+ ++.+.+.. +.+.-.+...+.++...+
T Consensus 263 ~k~~~-----------~GGit~~~~i~~~A~~~gi-~~~~~~~~--~es~i~~~a~~hlaaa~~ 312 (354)
T 3jva_A 263 IKLMK-----------CGGIHEALKINQICETAGI-ECMIGCMA--EETTIGITAAAHLAAAQK 312 (354)
T ss_dssp ECHHH-----------HTSHHHHHHHHHHHHHTTC-EEEECCCT--TCCHHHHHHHHHHHHHCT
T ss_pred ECchh-----------cCCHHHHHHHHHHHHHcCC-eEEecCCC--cccHHHHHHHHHHHhcCC
Confidence 66421 2568899999999999999 65433322 012223455566665543
No 309
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=33.16 E-value=1.4e+02 Score=25.13 Aligned_cols=23 Identities=9% Similarity=-0.022 Sum_probs=11.1
Q ss_pred CHHHHHHHHHHHHhCC-CCEEEEc
Q 022377 16 SLNEILRLAYLFVTSG-VDKIRLT 38 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~-~~~v~~t 38 (298)
+.+++.++.+.+.+.| +..|.++
T Consensus 172 ~~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 172 DIAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp CHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred CHHHHHHHHHHHHhcCCceEEEEe
Confidence 4445545555555555 4444443
No 310
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=33.03 E-value=1.1e+02 Score=26.09 Aligned_cols=82 Identities=13% Similarity=0.213 Sum_probs=48.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcC-----CccCccc--c---HHHHHHHHhccCCCCcEEEEeCccchHhhH
Q 022377 8 LTPKPQLLSLNEILRLAYLFVTSGVDKIRLTG-----GEPTVRK--D---IEEACFHLSKLKGLKTLAMTTNGLTLARKL 77 (298)
Q Consensus 8 ~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tG-----GEPll~~--~---~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~ 77 (298)
|-..+...+.+.+.+...++.+.|..-|.+.| |-+-+.. + +..+++.+++..++. ++|.|-= .+.+
T Consensus 23 Fsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~vp-iSIDT~~---~~Va 98 (314)
T 2vef_A 23 FSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDVL-ISIDTWK---SQVA 98 (314)
T ss_dssp -------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECSC---HHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCce-EEEeCCC---HHHH
Confidence 44455667888888888888889977777755 3222221 1 556666676644774 8887642 3556
Q ss_pred HHHHHcCCCeEEEecCC
Q 022377 78 PKLKESGLTSVNISLDT 94 (298)
Q Consensus 78 ~~l~~~~~~~v~iSldg 94 (298)
+.-.++|.+ +.=|+.+
T Consensus 99 ~aAl~aGa~-iINDVsg 114 (314)
T 2vef_A 99 EAALAAGAD-LVNDITG 114 (314)
T ss_dssp HHHHHTTCC-EEEETTT
T ss_pred HHHHHcCCC-EEEECCC
Confidence 666667887 5556655
No 311
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=32.86 E-value=1.6e+02 Score=25.52 Aligned_cols=135 Identities=16% Similarity=0.019 Sum_probs=67.6
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc----CCccCc----cccHHHHHHHHhccCCCCcEEEEeCc---------cch--H
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLT----GGEPTV----RKDIEEACFHLSKLKGLKTLAMTTNG---------LTL--A 74 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~t----GGEPll----~~~~~~ii~~~~~~~~~~~v~i~TNG---------~ll--~ 74 (298)
.+++++. ++.+.+.|...|.|. .-++.- .....++.+.+++. |+.-.++++|. .+. +
T Consensus 32 ~~~~~e~---l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~-GL~i~~~~~~~~~~p~~~~g~l~~~d 107 (387)
T 1bxb_A 32 RLDPVYV---VHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDET-GLKVPMVTANLFSDPAFKDGAFTSPD 107 (387)
T ss_dssp CCCHHHH---HHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHH-TCBCCEEECCCSSSGGGGGCSTTCSS
T ss_pred CCCHHHH---HHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHh-CCEEEEEecCCCCCccccCCCCCCCC
Confidence 5677775 455556688999987 322221 12344666677774 88622566543 122 1
Q ss_pred ------------hhHHHHHHcCCCeEEEecCCCCHHhhh-hhcCCCcHHHHHHHHHHHHH----c--CCCCEEEEEEEec
Q 022377 75 ------------RKLPKLKESGLTSVNISLDTLVPAKFE-FLTRRKGHEKVMESINAAIE----V--GYNPVKVNCVVMR 135 (298)
Q Consensus 75 ------------~~~~~l~~~~~~~v~iSldg~~~~~~~-~ir~~~~~~~v~~~i~~l~~----~--g~~~v~i~~vi~~ 135 (298)
+.++...+.|...|.+.. |.....+. .......++++.+.++.+.+ . |+ .+.+...-..
T Consensus 108 ~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~-G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv-~l~lE~~~~~ 185 (387)
T 1bxb_A 108 PWVRAYALRKSLETMDLGAELGAEIYVVWP-GREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGY-RFALEPKPNE 185 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEECC-TTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCC-EEEECCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEECC-CCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCc-EEEEecCCCC
Confidence 123333456888776643 11100000 01112347777787777665 3 45 4444432100
Q ss_pred ---CCCHhHHHHHHHHHhhCCC
Q 022377 136 ---GFNDDEICDFVELTRDRPI 154 (298)
Q Consensus 136 ---~~n~~~i~~i~~~~~~~g~ 154 (298)
+.......++.+++...+.
T Consensus 186 ~~~~~~~~t~~~~~~ll~~v~~ 207 (387)
T 1bxb_A 186 PRGDIYFATVGSMLAFIHTLDR 207 (387)
T ss_dssp SSSEESSCSHHHHHHHHTTSSS
T ss_pred CCCCccCCCHHHHHHHHHHcCC
Confidence 0112346666777766543
No 312
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=32.83 E-value=31 Score=23.53 Aligned_cols=31 Identities=23% Similarity=0.392 Sum_probs=21.7
Q ss_pred CCCEEEEcCCccCccccHHHHHHHHhccCCC
Q 022377 31 GVDKIRLTGGEPTVRKDIEEACFHLSKLKGL 61 (298)
Q Consensus 31 ~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~ 61 (298)
.++.|.+..|+.+..|+..++.+++.+..|+
T Consensus 55 tVP~I~i~Dg~~l~~~~~~el~~~L~el~gL 85 (92)
T 2lqo_A 55 TVPTVKFADGSTLTNPSADEVKAKLVKIAGL 85 (92)
T ss_dssp CSCEEEETTSCEEESCCHHHHHHHHHHHHCC
T ss_pred EeCEEEEeCCEEEeCCCHHHHHHHHHHhcCC
Confidence 3677777778888888777777776665444
No 313
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=32.79 E-value=2.5e+02 Score=24.52 Aligned_cols=97 Identities=13% Similarity=0.118 Sum_probs=66.4
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCcccc-HHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKD-IEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSV 88 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v 88 (298)
+.-.+.++..++++.+.++++..|- ||+-..+ +.. ++.+++..++. |.++..+. ...++.+.+.+ ++.|
T Consensus 207 N~~~~~~~A~~~~~~L~~~~i~~iE----eP~~~~d~~~~-~~~l~~~~~iP---Ia~dE~~~~~~~~~~~i~~~a~d~v 278 (392)
T 3ddm_A 207 NQGWDLPRARQMAQRLGPAQLDWLE----EPLRADRPAAE-WAELAQAAPMP---LAGGENIAGVAAFETALAARSLRVM 278 (392)
T ss_dssp TTCCCHHHHHHHHHHHGGGCCSEEE----CCSCTTSCHHH-HHHHHHHCSSC---EEECTTCCSHHHHHHHHHHTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEE----CCCCccchHHH-HHHHHHhcCCC---EEeCCCCCCHHHHHHHHHcCCCCEE
Confidence 4567899999999999998887776 7987555 443 44455433553 66777665 34666666544 5554
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEE
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVK 128 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~ 128 (298)
++.+. ..+++...++....+.++|+ ++.
T Consensus 279 ~~k~~-----------~~GGit~~~~ia~~A~~~gi-~~~ 306 (392)
T 3ddm_A 279 QPDLA-----------KWGGFSGCLPVARAVVAAGL-RYC 306 (392)
T ss_dssp CCCTT-----------TTTHHHHHHHHHHHHHHTTC-EEC
T ss_pred EeCcc-----------hhCCHHHHHHHHHHHHHcCC-EEE
Confidence 44432 23568899999999999999 653
No 314
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=32.62 E-value=63 Score=30.03 Aligned_cols=27 Identities=11% Similarity=0.345 Sum_probs=22.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLT 38 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~t 38 (298)
++.++.+.++++|+.+..++...+.++
T Consensus 149 Rhf~~~~~ik~~ID~MA~~KlN~lH~H 175 (543)
T 3rcn_A 149 RHFMPKDNVLRFIEVMAMHKLNVLHLH 175 (543)
T ss_dssp TSCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCccCHHHHHHHHHHHHHcCCcEEEee
Confidence 568999999999999999887766663
No 315
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=32.44 E-value=2.1e+02 Score=25.07 Aligned_cols=96 Identities=9% Similarity=0.025 Sum_probs=62.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++. -++.+++..++ -|.++..+. ...++.+.+.+ ++.|+
T Consensus 209 n~~~~~~~A~~~~~~L~~~~i~~iE----qP~~~~~~~-~~~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~~~d~v~ 280 (401)
T 3sbf_A 209 HERLFPNQAIQFAKEVEQYKPYFIE----DILPPNQTE-WLDNIRSQSSV---SLGLGELFNNPEEWKSLIANRRIDFIR 280 (401)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSCEE----CSSCTTCGG-GHHHHHTTCCC---CEEECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE----CCCChhHHH-HHHHHHhhCCC---CEEeCCccCCHHHHHHHHhcCCCCEEe
Confidence 3457788888888888888776665 787544443 34445553344 466777666 35666676654 56555
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
+.+. ..+++..+++-...+..+|+ ++
T Consensus 281 ~k~~-----------~~GGit~~~kia~~A~~~gi-~~ 306 (401)
T 3sbf_A 281 CHVS-----------QIGGITPALKLGHLCQNFGV-RI 306 (401)
T ss_dssp CCGG-----------GGTSHHHHHHHHHHHHHHTC-EE
T ss_pred cCcc-----------ccCCHHHHHHHHHHHHHcCC-EE
Confidence 4432 13568889999999999999 54
No 316
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=32.31 E-value=1.4e+02 Score=26.13 Aligned_cols=96 Identities=17% Similarity=0.123 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++..+-+..++. .+-|.+.+.+. .+.++++.+.+ .+.|+
T Consensus 228 n~~~~~~~ai~~~~~l~~~~i~~iE----qP~~~~d~~~~~~l~~~~----~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ 299 (398)
T 2pp0_A 228 NQQWDRETAIRMGRKMEQFNLIWIE----EPLDAYDIEGHAQLAAAL----DTPIATGEMLTSFREHEQLILGNASDFVQ 299 (398)
T ss_dssp TTCSCHHHHHHHHHHHGGGTCSCEE----CCSCTTCHHHHHHHHHHC----SSCEEECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred CCCCCHHHHHHHHHHHHHcCCceee----CCCChhhHHHHHHHHhhC----CCCEEecCCcCCHHHHHHHHHcCCCCEEE
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
+.+.-. +++..+++.++.+.++|+ ++
T Consensus 300 ik~~~~-----------GGite~~~i~~~A~~~gi-~~ 325 (398)
T 2pp0_A 300 PDAPRV-----------GGISPFLKIMDLAAKHGR-KL 325 (398)
T ss_dssp CCHHHH-----------TSHHHHHHHHHHHHHTTC-EE
T ss_pred eCcccc-----------CCHHHHHHHHHHHHHcCC-eE
No 317
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=32.30 E-value=1.5e+02 Score=24.85 Aligned_cols=132 Identities=11% Similarity=0.127 Sum_probs=84.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEE--cCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-------------HhhHHHH
Q 022377 16 SLNEILRLAYLFVTSGVDKIRL--TGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-------------ARKLPKL 80 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~--tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-------------~~~~~~l 80 (298)
+.+++.+.++...+.| ..|.| |+| -||..-..+++.+++ .+..-++|--|.+.+ ++.++.+
T Consensus 9 ti~elr~~~~~~~~~g-~~Ig~VPTMG--aLH~GHlsLv~~Ar~-~d~VVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll 84 (285)
T 3mxt_A 9 SVKEAKQIVKDWKSHQ-LSIGYVPTMG--FLHDGHLSLVKHAKT-QDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMC 84 (285)
T ss_dssp CHHHHHHHHHHHHHTT-CCEEEEEECS--SCCHHHHHHHHHHTT-SSEEEEEECCCGGGCCTTSCTTTSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcC-CeEEEEcCCC--cccHHHHHHHHHHHh-CCEEEEEeccCccccCCchhhhcCCCCHHHHHHHH
Confidence 6788999998887777 45555 777 399999999999988 564346677787654 2357888
Q ss_pred HHcCCCeEEEecCCCCHHhhhh--------------h---cCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHH
Q 022377 81 KESGLTSVNISLDTLVPAKFEF--------------L---TRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEIC 143 (298)
Q Consensus 81 ~~~~~~~v~iSldg~~~~~~~~--------------i---r~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~ 143 (298)
.++|+|.| +.-+. ++.|-. + .+.+.|+-+..-+.+|...=-+.. ..+.. ...+++.
T Consensus 85 ~~~gvD~v-F~P~~--~emYP~g~~t~v~~~~l~~~LeG~~RPgHF~GV~TVV~KLfniv~Pd~---A~FGe-KD~QQl~ 157 (285)
T 3mxt_A 85 QDNGVDMV-FIPDA--TQMYLKNFSTYVDMNTITDKLCGAKRPGHFRGVCTVLTKFFNILNPDI---VYMGQ-KDAQQCV 157 (285)
T ss_dssp HHTTCSEE-ECCCH--HHHSCTTCCCCCCCSSSTTSHHHHHSTTHHHHHHHHHHHHHHHHCCSE---EEEEG-GGHHHHH
T ss_pred HHCCCCEE-ECCCH--HHcCCCCCeeEEEcCCccccccCCCCCchhhhHHHHHHHHHhhcCCCE---eEEcc-hHHHHHH
Confidence 88898843 32111 122211 1 122348888888877776522121 22332 4677787
Q ss_pred HHHHHHhhCCCeeEE
Q 022377 144 DFVELTRDRPINIRF 158 (298)
Q Consensus 144 ~i~~~~~~~g~~~~~ 158 (298)
=+-+.+.++.+++..
T Consensus 158 vIrrmV~DL~~pv~I 172 (285)
T 3mxt_A 158 VVRHMVDDLNFDLKI 172 (285)
T ss_dssp HHHHHHHHTTCSSEE
T ss_pred HHHHHHHHcCCCceE
Confidence 778888888776543
No 318
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=32.21 E-value=2.1e+02 Score=24.56 Aligned_cols=135 Identities=14% Similarity=0.134 Sum_probs=75.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEc-CCccCccccHHHHHHHHhcc--CCCCcEEEEeCccch-Hhh---HHHHHHcCCCe
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLT-GGEPTVRKDIEEACFHLSKL--KGLKTLAMTTNGLTL-ARK---LPKLKESGLTS 87 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~t-GGEPll~~~~~~ii~~~~~~--~~~~~v~i~TNG~ll-~~~---~~~l~~~~~~~ 87 (298)
.+.+++.+.++++.+.|.+.+.+- |+.| .+-.+.++.+++. .++. +.+.-|+... ++. ++.|.+.++.+
T Consensus 138 ~~~~~~~~~a~~~~~~G~~~~K~K~g~~~---~~d~~~v~avR~a~g~~~~-l~vDan~~~~~~~a~~~~~~L~~~~i~~ 213 (354)
T 3jva_A 138 DEPNVMAQKAVEKVKLGFDTLKIKVGTGI---EADIARVKAIREAVGFDIK-LRLDANQAWTPKDAVKAIQALADYQIEL 213 (354)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSCH---HHHHHHHHHHHHHHCTTSE-EEEECTTCSCHHHHHHHHHHTTTSCEEE
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEEeCCCH---HHHHHHHHHHHHHcCCCCe-EEEECCCCCCHHHHHHHHHHHHhcCCCE
Confidence 478888888888878898888885 5555 2334666777663 4664 8899998765 332 34454555665
Q ss_pred EEEecCCCCHHhhhhhcCC--------CcHHHHHHHHHHHHHcCCCCEEEEEEEec-CCCHhHHHHHHHHHhhCCCee
Q 022377 88 VNISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 88 v~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~vi~~-~~n~~~i~~i~~~~~~~g~~~ 156 (298)
|.=.+...+-+.+..++.. .+... ...++.+.+.+...+ ++.-+++ | -..+..++++++...|+.+
T Consensus 214 iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~-~~~~~~~l~~~~~d~-v~~k~~~~G-Git~~~~i~~~A~~~gi~~ 288 (354)
T 3jva_A 214 VEQPVKRRDLEGLKYVTSQVNTTIMADESCFD-AQDALELVKKGTVDV-INIKLMKCG-GIHEALKINQICETAGIEC 288 (354)
T ss_dssp EECCSCTTCHHHHHHHHHHCSSEEEESTTCCS-HHHHHHHHHHTCCSE-EEECHHHHT-SHHHHHHHHHHHHHTTCEE
T ss_pred EECCCChhhHHHHHHHHHhCCCCEEEcCCcCC-HHHHHHHHHcCCCCE-EEECchhcC-CHHHHHHHHHHHHHcCCeE
Confidence 5533433233445454421 11111 122333333332021 2332222 2 4667788888888888764
No 319
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=32.18 E-value=77 Score=27.67 Aligned_cols=61 Identities=11% Similarity=0.110 Sum_probs=43.1
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEE--cC-----------Cc---------------------cCccccHHHHHHHHh
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRL--TG-----------GE---------------------PTVRKDIEEACFHLS 56 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~--tG-----------GE---------------------Pll~~~~~~ii~~~~ 56 (298)
.+..++.+.++++|+.+..++...+.+ +- |+ ..-..++.+|++|++
T Consensus 26 aR~f~~~~~ik~~id~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~~~~~~~~g~~~~~~~~~g~YT~~di~eiv~YA~ 105 (367)
T 1yht_A 26 ARHFYSPEVIKSFIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGIYINPYTGKPFLSYRQLDDIKAYAK 105 (367)
T ss_dssp SSSCCCHHHHHHHHHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTSCEECTTTCCEEBCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEEEEEcCCCceeeecchhhhhhhhccccCCCcCCCCCCCCCcCHHHHHHHHHHHH
Confidence 355899999999999999988766554 32 11 123346889999999
Q ss_pred ccCCCCcEE--EEeCccch
Q 022377 57 KLKGLKTLA--MTTNGLTL 73 (298)
Q Consensus 57 ~~~~~~~v~--i~TNG~ll 73 (298)
++ ++. |- |.|=|...
T Consensus 106 ~r-gI~-VIPEID~PGH~~ 122 (367)
T 1yht_A 106 AK-GIE-LIPELDSPNHMT 122 (367)
T ss_dssp HT-TCE-EEEEEEESSSCH
T ss_pred Hc-CCE-EEEeccchHHHH
Confidence 94 884 53 66777643
No 320
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=32.16 E-value=1.2e+02 Score=27.13 Aligned_cols=102 Identities=11% Similarity=0.172 Sum_probs=63.3
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCc------------------cCccccHHHHHHHHhccC--CCCcEEEEeCccch
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGE------------------PTVRKDIEEACFHLSKLK--GLKTLAMTTNGLTL 73 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGE------------------Pll~~~~~~ii~~~~~~~--~~~~v~i~TNG~ll 73 (298)
.++.+++..+.+.+.+.|+..|.+++.- |-+.+--.+++..+++.. .+. -|...|...
T Consensus 279 d~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP--IIg~GGI~s 356 (415)
T 3i65_A 279 DLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP--IIASGGIFS 356 (415)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC--EEECSSCCS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC--EEEECCCCC
Confidence 4677889999999999999999887521 111222346677766643 343 244555555
Q ss_pred HhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHH-cCC
Q 022377 74 ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIE-VGY 124 (298)
Q Consensus 74 ~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~-~g~ 124 (298)
.+.+.++..+|.+.|+|. +.-.|+ |..-+.++.+.++.+.+ .|+
T Consensus 357 ~eDa~e~l~aGAd~VqIg----ra~l~~---GP~~~~~i~~~L~~~l~~~G~ 401 (415)
T 3i65_A 357 GLDALEKIEAGASVCQLY----SCLVFN---GMKSAVQIKRELNHLLYQRGY 401 (415)
T ss_dssp HHHHHHHHHHTEEEEEES----HHHHHH---GGGHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEEc----HHHHhc---CHHHHHHHHHHHHHHHHHcCC
Confidence 565655556799988886 233332 22337788888776544 455
No 321
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=31.97 E-value=1.3e+02 Score=24.01 Aligned_cols=78 Identities=15% Similarity=0.175 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEc-CCccCc-c---------ccHHHHHHHHhccCCCCcEEEEeC------ccch--Hhh
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLT-GGEPTV-R---------KDIEEACFHLSKLKGLKTLAMTTN------GLTL--ARK 76 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~t-GGEPll-~---------~~~~~ii~~~~~~~~~~~v~i~TN------G~ll--~~~ 76 (298)
..+.+.+.++.+..+|+..|.+. |.-|-- . ..+.++.+++.+ .|+. +.+.+- +..+ .+.
T Consensus 83 ~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~gv~-l~~E~~~~~~~~~~~~~~~~~ 160 (260)
T 1k77_A 83 AHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAP-HGKR-ILVEALSPGVKPHYLFSSQYQ 160 (260)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGG-GTCE-EEECCCCTTTSTTBSCCSHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-cCCE-EEEEeCCccCCCcCccCCHHH
Confidence 45678889999999999999885 432321 1 113355566666 4885 888765 3333 233
Q ss_pred HHHH-HHcCCCeEEEecCCC
Q 022377 77 LPKL-KESGLTSVNISLDTL 95 (298)
Q Consensus 77 ~~~l-~~~~~~~v~iSldg~ 95 (298)
+..+ ...+-..+.+-+|..
T Consensus 161 ~~~l~~~~~~~~~g~~~D~~ 180 (260)
T 1k77_A 161 ALAIVEEVARDNVFIQLDTF 180 (260)
T ss_dssp HHHHHHHHCCTTEEEEEEHH
T ss_pred HHHHHHHhCCCCEEEEeeHH
Confidence 3333 344555688888764
No 322
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=31.74 E-value=2e+02 Score=22.99 Aligned_cols=132 Identities=16% Similarity=0.133 Sum_probs=66.6
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEE-EEe--Cccc------------hHhhHH
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLA-MTT--NGLT------------LARKLP 78 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~-i~T--NG~l------------l~~~~~ 78 (298)
.++.++. ++.+.+.|...|-+.... +-..+..++.+.+.+. |+. +. +.+ |... +.+.++
T Consensus 17 ~~~~~~~---l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~~l~~~-gl~-~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~ 90 (275)
T 3qc0_A 17 QCGFAEA---VDICLKHGITAIAPWRDQ-VAAIGLGEAGRIVRAN-GLK-LTGLCRGGFFPAPDASGREKAIDDNRRAVD 90 (275)
T ss_dssp TCCHHHH---HHHHHHTTCCEEECBHHH-HHHHCHHHHHHHHHHH-TCE-ESCEEEEECCCCSSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHH---HHHHHHcCCCEEEecccc-ccccCHHHHHHHHHHc-CCc-eEEeecCCCcCCCCHHHHHHHHHHHHHHHH
Confidence 3565554 666677899999987643 2223456777777774 775 43 332 2110 112344
Q ss_pred HHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHH----HcCCCCEEEEEEEe----c---CCCHhHHHHHHH
Q 022377 79 KLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAI----EVGYNPVKVNCVVM----R---GFNDDEICDFVE 147 (298)
Q Consensus 79 ~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~----~~g~~~v~i~~vi~----~---~~n~~~i~~i~~ 147 (298)
.....|...|.+..-...+.. ......++.+.+.++.+. +.|+ .+.+..+-. + ..+.+++.++++
T Consensus 91 ~a~~lG~~~v~~~~g~~~~~~---~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lE~~~~~~~~~~~~~~~~~~~~~l~~ 166 (275)
T 3qc0_A 91 EAAELGADCLVLVAGGLPGGS---KNIDAARRMVVEGIAAVLPHARAAGV-PLAIEPLHPMYAADRACVNTLGQALDICE 166 (275)
T ss_dssp HHHHTTCSCEEEECBCCCTTC---CCHHHHHHHHHHHHHHHHHHHHHHTC-CEEECCCCGGGTTTTBSCCCHHHHHHHHH
T ss_pred HHHHhCCCEEEEeeCCCCCCC---cCHHHHHHHHHHHHHHHHHHHHHcCC-EEEEeECCCcccCCccccCCHHHHHHHHH
Confidence 455567887777643221100 000112555666655554 3577 666654210 1 123455555555
Q ss_pred HHhhCCCee
Q 022377 148 LTRDRPINI 156 (298)
Q Consensus 148 ~~~~~g~~~ 156 (298)
.+.. .+.+
T Consensus 167 ~~~~-~vg~ 174 (275)
T 3qc0_A 167 TLGP-GVGV 174 (275)
T ss_dssp HHCT-TEEE
T ss_pred HhCc-ccEE
Confidence 5544 3443
No 323
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=31.72 E-value=1.6e+02 Score=24.72 Aligned_cols=73 Identities=21% Similarity=0.345 Sum_probs=49.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc-C-------CccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLT-G-------GEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG 84 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~t-G-------GEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~ 84 (298)
.-++|+..+++++ .|+..+..+ | |+|-|+++..+-++... ++. +.+ --|+-+ ++.+++....|
T Consensus 158 yT~Peea~~Fv~~---TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v---~vp-LVl-HGgSG~~~e~i~~ai~~G 229 (288)
T 3q94_A 158 YADPAECKHLVEA---TGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT---GVP-LVL-HGGTGIPTADIEKAISLG 229 (288)
T ss_dssp CCCHHHHHHHHHH---HCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHH---CSC-EEE-CCCTTCCHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHH---HCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhc---CCC-EEE-eCCCCCCHHHHHHHHHcC
Confidence 4678888887764 467766664 3 77888888663333332 454 433 444445 67899999999
Q ss_pred CCeEEEecCC
Q 022377 85 LTSVNISLDT 94 (298)
Q Consensus 85 ~~~v~iSldg 94 (298)
+..|+|+-|.
T Consensus 230 v~KiNi~Tdl 239 (288)
T 3q94_A 230 TSKINVNTEN 239 (288)
T ss_dssp EEEEEECHHH
T ss_pred CeEEEEChHH
Confidence 9999998654
No 324
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=31.70 E-value=2e+02 Score=22.98 Aligned_cols=122 Identities=13% Similarity=0.039 Sum_probs=63.7
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCc----cccHHHHHHHHhccCCCCcE-EEEeCccc----------hHhhHH
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTV----RKDIEEACFHLSKLKGLKTL-AMTTNGLT----------LARKLP 78 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll----~~~~~~ii~~~~~~~~~~~v-~i~TNG~l----------l~~~~~ 78 (298)
.++.++ .++.+.+.|...|.+.+..|.. ..+..++-+.+.+ .|+. + ++.+...+ +.+.++
T Consensus 18 ~~~~~~---~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~-~gl~-~~~~~~~~~~~~~~~~~~~~~~~~i~ 92 (272)
T 2q02_A 18 GLSIEA---FFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEK-YGLE-IVTINAVYPFNQLTEEVVKKTEGLLR 92 (272)
T ss_dssp TSCHHH---HHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHH-TTCE-EEEEEEETTTTSCCHHHHHHHHHHHH
T ss_pred CCCHHH---HHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHH-cCCe-EEechhhhccCCcHHHHHHHHHHHHH
Confidence 345555 4666677899999998654421 2246677777777 4885 5 55432111 112344
Q ss_pred HHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHH-HHHHHHHHH----cCCCCEEEEEEEecC---CCHhHHHHHHHHHh
Q 022377 79 KLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKV-MESINAAIE----VGYNPVKVNCVVMRG---FNDDEICDFVELTR 150 (298)
Q Consensus 79 ~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v-~~~i~~l~~----~g~~~v~i~~vi~~~---~n~~~i~~i~~~~~ 150 (298)
.....|...|.+. -+.. +...++.+ .+.++.+.+ +|+ .+.+...-.++ .+.+++.++++-+.
T Consensus 93 ~a~~lG~~~v~~~-~g~~--------~~~~~~~~~~~~l~~l~~~a~~~gv-~l~~E~~~~~~~~~~~~~~~~~l~~~v~ 162 (272)
T 2q02_A 93 DAQGVGARALVLC-PLND--------GTIVPPEVTVEAIKRLSDLFARYDI-QGLVEPLGFRVSSLRSAVWAQQLIREAG 162 (272)
T ss_dssp HHHHHTCSEEEEC-CCCS--------SBCCCHHHHHHHHHHHHHHHHTTTC-EEEECCCCSTTCSCCCHHHHHHHHHHHT
T ss_pred HHHHhCCCEEEEc-cCCC--------chhHHHHHHHHHHHHHHHHHHHcCC-EEEEEecCCCcccccCHHHHHHHHHHhC
Confidence 4455678877663 2211 11345566 666665543 466 55444331111 13445555555443
No 325
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=31.42 E-value=2.5e+02 Score=24.05 Aligned_cols=137 Identities=10% Similarity=0.056 Sum_probs=84.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCCE-EEEcCCc-cCcccc-HHHHHHHHhcc-CCCCcEEEEeCccchHhhHHHHHHcCCCeE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDK-IRLTGGE-PTVRKD-IEEACFHLSKL-KGLKTLAMTTNGLTLARKLPKLKESGLTSV 88 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~-v~~tGGE-Pll~~~-~~~ii~~~~~~-~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v 88 (298)
+-.+.|.+..+++.+.+.+.+. +.++-|. -....+ +..++..+.+. .++. |.+.+.=-.-.+.+.+..++|+.+|
T Consensus 24 Nv~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VP-ValHlDHg~~~e~i~~ai~~GFtSV 102 (323)
T 2isw_A 24 NVNNMEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKHPDIP-ICIHLDHGDTLESVKMAIDLGFSSV 102 (323)
T ss_dssp ECCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHCTTSC-EEEEEEEECSHHHHHHHHHTTCSEE
T ss_pred eeCCHHHHHHHHHHHHHhCCCEEEECChhHHHhCCHHHHHHHHHHHHHhcCCCc-EEEECCCCCCHHHHHHHHHcCCCeE
Confidence 4567899999999999987553 3444333 222223 34666666554 4675 8776652222356778888899988
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCC--------HhHHHHHHHHHhhCCCeeEEE
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFN--------DDEICDFVELTRDRPINIRFI 159 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n--------~~~i~~i~~~~~~~g~~~~~~ 159 (298)
.+.--..+-+ .+.+.+.+-++.+++.|+ .|+...=..-|.. ..+.++..+|+.+.|++.--+
T Consensus 103 MiDgS~~p~e--------ENi~~Tk~vv~~ah~~gv-sVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~LAv 172 (323)
T 2isw_A 103 MIDASHHPFD--------ENVRITKEVVAYAHARSV-SVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVELTGVDALAV 172 (323)
T ss_dssp EECCTTSCHH--------HHHHHHHHHHHHHHTTTC-EEEEEESCC----------CCCCCHHHHHHHHHHHCCSEEEE
T ss_pred EecCCCCCHH--------HHHHHHHHHHHHHHHcCC-eEEEEeCCccCCccCcccccccCCHHHHHHHHHHHCCCEEEE
Confidence 8764433222 134566667777777888 7766552222211 245788899999999974444
No 326
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=31.22 E-value=2.3e+02 Score=24.45 Aligned_cols=97 Identities=13% Similarity=0.158 Sum_probs=63.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++..+ +.+++..++. |.++..+. ...++.+.+.+ ++.|+
T Consensus 205 n~~~~~~~a~~~~~~l~~~~i~~iE----qP~~~~d~~~~-~~l~~~~~iP---Ia~dE~~~~~~~~~~~i~~~~~d~v~ 276 (372)
T 3tj4_A 205 NGKWDLPTCQRFCAAAKDLDIYWFE----EPLWYDDVTSH-ARLARNTSIP---IALGEQLYTVDAFRSFIDAGAVAYVQ 276 (372)
T ss_dssp TTCCCHHHHHHHHHHTTTSCEEEEE----SCSCTTCHHHH-HHHHHHCSSC---EEECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred CCCCCHHHHHHHHHHHhhcCCCEEE----CCCCchhHHHH-HHHHhhcCCC---EEeCCCccCHHHHHHHHHcCCCCEEE
Confidence 4557888888888888777755554 78865554433 4444433543 55676655 34566666654 56555
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVK 128 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~ 128 (298)
+.+. ..+++..+++....+.++|+ ++.
T Consensus 277 ~k~~-----------~~GGit~~~~ia~~A~~~gi-~~~ 303 (372)
T 3tj4_A 277 PDVT-----------RLGGITEYIQVADLALAHRL-PVV 303 (372)
T ss_dssp CCTT-----------TTTHHHHHHHHHHHHHHTTC-CBC
T ss_pred eCcc-----------ccCCHHHHHHHHHHHHHcCC-EEE
Confidence 5432 23568899999999999999 653
No 327
>2v5c_A O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrolase, coiled coil, family 84 glycoside hydrolase, carbohydrate binding module; 2.10A {Clostridium perfringens} PDB: 2cbj_A* 2cbi_A 2vur_A* 2x0y_A* 2j62_A* 2wb5_A* 2xpk_A* 2yds_A* 2ydr_A* 2ydq_A*
Probab=31.18 E-value=1.8e+02 Score=27.34 Aligned_cols=83 Identities=11% Similarity=0.040 Sum_probs=56.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcC--------CccCccc-----cHHHHHHHHhccCCCCcEE--EEe----Cccc
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTG--------GEPTVRK-----DIEEACFHLSKLKGLKTLA--MTT----NGLT 72 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tG--------GEPll~~-----~~~~ii~~~~~~~~~~~v~--i~T----NG~l 72 (298)
+..++.+.++++|+.+..++...+.++= +=+..++ ++.+|+++++++ ++. |. +.. .+.-
T Consensus 160 R~~~~~~~ik~~id~ma~~KlN~~h~Hl~DDq~~~~~wr~~Yp~~~~~~i~elv~yA~~r-gI~-vv~~i~Pe~d~~~~~ 237 (594)
T 2v5c_A 160 GTPWTHQDRLDQIKFYGENKLNTYIYAPKDDPYHREKWREPYPESEMQRMQELINASAEN-KVD-FVFGISPGIDIRFDG 237 (594)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCCEEEECCTTCGGGTTTTTSCCCGGGHHHHHHHHHHHHHT-TCE-EEEEECGGGTCCCST
T ss_pred CCCCCHHHHHHHHHHHHHhCCcEEEEecccCcccccccCCCCCHHHHHHHHHHHHHHHHC-CcE-EEEecCCCccccCCC
Confidence 4568999999999999998877777642 2112222 588999999994 885 53 111 1211
Q ss_pred ---------hHhhHHHHHHcCCCeEEEecCCCC
Q 022377 73 ---------LARKLPKLKESGLTSVNISLDTLV 96 (298)
Q Consensus 73 ---------l~~~~~~l~~~~~~~v~iSldg~~ 96 (298)
+...++++.+.|...+.|-.|-..
T Consensus 238 ~~~~~~~~~l~~k~~~l~~~G~~~f~IG~DEi~ 270 (594)
T 2v5c_A 238 DAGEEDFNHLITKAESLYDMGVRSFAIYWDDIQ 270 (594)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCEEEEECSSCS
T ss_pred cchHHHHHHHHHHHHHHHhcCCcEEEecCccCC
Confidence 223466666678899999888764
No 328
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=31.14 E-value=1.4e+02 Score=23.17 Aligned_cols=52 Identities=15% Similarity=0.250 Sum_probs=37.4
Q ss_pred hcCCCc-HHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCee
Q 022377 103 LTRRKG-HEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 103 ir~~~~-~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~~ 156 (298)
+.|..+ +..+.++.+.|.+.|+ +..+.++-- -.+.+.+.++++-+.+.|+++
T Consensus 28 imGS~SD~~v~~~a~~~L~~~gI-~~e~~V~SA-HRtp~~l~~~~~~a~~~g~~V 80 (181)
T 4b4k_A 28 IMGSTSDWETMKYACDILDELNI-PYEKKVVSA-HRTPDYMFEYAETARERGLKV 80 (181)
T ss_dssp EESSGGGHHHHHHHHHHHHHTTC-CEEEEECCT-TTSHHHHHHHHHHTTTTTCCE
T ss_pred EECCHhHHHHHHHHHHHHHHcCC-CeeEEEEcc-ccChHHHHHHHHHHHhcCceE
Confidence 344444 8888888899999999 777665332 246778888888887778764
No 329
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=31.05 E-value=2.1e+02 Score=23.06 Aligned_cols=126 Identities=11% Similarity=0.114 Sum_probs=82.4
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeC---ccch-H---hhHHHHHHcC
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTN---GLTL-A---RKLPKLKESG 84 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TN---G~ll-~---~~~~~l~~~~ 84 (298)
+...+.+++.++++++.++++..|++ +|.+...+....+ +++ +.-+++ |... . ...+. .+.|
T Consensus 11 ~p~~t~~~i~~l~~~A~~~~~~aVcv-------~p~~v~~a~~~l~--gv~-v~tvigFP~G~~~~~~k~~E~~~-i~~G 79 (226)
T 1vcv_A 11 KPYLTVDEAVAGARKAEELGVAAYCV-------NPIYAPVVRPLLR--KVK-LCVVADFPFGALPTASRIALVSR-LAEV 79 (226)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCSEEEE-------CGGGHHHHGGGCS--SSE-EEEEESTTTCCSCHHHHHHHHHH-HTTT
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEE-------CHHHHHHHHHHhC--CCe-EEEEeCCCCCCCchHHHHHHHHH-HHCC
Confidence 46779999999999999999888885 5666555443332 353 655552 2122 1 23566 7789
Q ss_pred CCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEec-CCCHhHHHHHHHHHhhCCCee
Q 022377 85 LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 85 ~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~-~~n~~~i~~i~~~~~~~g~~~ 156 (298)
.+.|-+-++-. .+ ..+.++.+.+-|+.+++.-- ...+.+.+-. -.+.+++....+.+.+.|.++
T Consensus 80 AdEID~Vinig------~~-~~g~~~~v~~ei~~v~~a~~-~~~lKvIlEt~~Lt~eei~~a~~ia~eaGADf 144 (226)
T 1vcv_A 80 ADEIDVVAPIG------LV-KSRRWAEVRRDLISVVGAAG-GRVVKVITEEPYLRDEERYTLYDIIAEAGAHF 144 (226)
T ss_dssp CSEEEEECCHH------HH-HTTCHHHHHHHHHHHHHHTT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSE
T ss_pred CCEEEEecchh------hh-cCCCHHHHHHHHHHHHHHHc-CCCceEEEeccCCCHHHHHHHHHHHHHcCCCE
Confidence 99888887541 11 13568999999999988621 1122222211 136788999999999999874
No 330
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=30.99 E-value=2e+02 Score=24.74 Aligned_cols=74 Identities=12% Similarity=0.153 Sum_probs=47.5
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc-CCc---cC-cccc-HHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-C
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLT-GGE---PT-VRKD-IEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-L 85 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~t-GGE---Pl-l~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~ 85 (298)
-.+.++...+++.+.+. +..|.++ |+- |. ..+. ..++++.+++..++ -+.+||-+. .+.++++.+.| .
T Consensus 226 g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~i---PVi~~Ggi~t~e~Ae~~l~~G~a 301 (343)
T 3kru_A 226 GINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNI---KTSAVGLITTQELAEEILSNERA 301 (343)
T ss_dssp SCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTC---EEEEESSCCCHHHHHHHHHTTSC
T ss_pred CccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCc---ccceeeeeeHHHHHHHHHhchhh
Confidence 36788999999998888 8888886 431 11 1222 34666666664343 345556544 56777777776 7
Q ss_pred CeEEEe
Q 022377 86 TSVNIS 91 (298)
Q Consensus 86 ~~v~iS 91 (298)
|.|.+.
T Consensus 302 D~V~iG 307 (343)
T 3kru_A 302 DLVALG 307 (343)
T ss_dssp SEEEES
T ss_pred HHHHHH
Confidence 877775
No 331
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=30.94 E-value=1e+02 Score=26.57 Aligned_cols=119 Identities=18% Similarity=0.121 Sum_probs=76.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC--CCeE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG--LTSV 88 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~--~~~v 88 (298)
+.-.+.++..++++.+.++++..|- ||+-..++.. ++.+++..++ -|.++..+. ...++.+.+.+ ++.|
T Consensus 192 n~~~~~~~a~~~~~~l~~~~i~~iE----qP~~~~d~~~-~~~l~~~~~i---PIa~dE~~~~~~~~~~~~~~~~~~d~v 263 (356)
T 3ro6_B 192 NQSYDRDGLLRLDRLVQELGIEFIE----QPFPAGRTDW-LRALPKAIRR---RIAADESLLGPADAFALAAPPAACGIF 263 (356)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCCCEE----CCSCTTCHHH-HHTSCHHHHH---TEEESTTCCSHHHHHHHHSSSCSCSEE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE----CCCCCCcHHH-HHHHHhcCCC---CEEeCCcCCCHHHHHHHHhcCCcCCEE
Confidence 4557889999999999998877775 7886545433 3344432233 466777666 34667777654 7877
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCC
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRP 153 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g 153 (298)
++.+. ..+++..+++.+..+.++|+ ++.+.+.+ ...=.+...+.++...+
T Consensus 264 ~~k~~-----------~~GGit~~~~i~~~a~~~gi-~~~~~~~~---es~i~~aa~~hlaaa~p 313 (356)
T 3ro6_B 264 NIKLM-----------KCGGLAPARRIATIAETAGI-DLMWGCMD---ESRISIAAALHAALACP 313 (356)
T ss_dssp EECHH-----------HHCSHHHHHHHHHHHHHHTC-EEEECCCS---CCHHHHHHHHHHHHTCT
T ss_pred EEccc-----------ccCCHHHHHHHHHHHHHcCC-EEEecCCc---ccHHHHHHHHHHHhcCC
Confidence 77642 12568899999999999999 66443321 12223445566665543
No 332
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=30.62 E-value=2.6e+02 Score=24.66 Aligned_cols=98 Identities=7% Similarity=-0.018 Sum_probs=62.7
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++.. ++.+++..++ -|.++..+. ...++++.+.+ ++.|+
T Consensus 228 N~~~~~~~A~~~~~~L~~~~i~~iE----qP~~~~d~~~-~~~l~~~~~i---PIa~dE~~~~~~~~~~~l~~~a~d~v~ 299 (418)
T 3r4e_A 228 HHRYTPQEAANLGKMLEPYQLFWLE----DCTPAENQEA-FRLVRQHTVT---PLAVGEIFNTIWDAKDLIQNQLIDYIR 299 (418)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEE----SCSCCSSGGG-GHHHHHHCCS---CEEECTTCCSGGGTHHHHHTTCCSEEC
T ss_pred CCCCCHHHHHHHHHHHHhhCCCEEE----CCCCccCHHH-HHHHHhcCCC---CEEEcCCcCCHHHHHHHHHcCCCCeEe
Confidence 3456788888888888888877665 7875434332 3334443344 355676655 34566666654 66555
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
+.+.- .+++..+++....+.++|+ ++.+
T Consensus 300 ~k~~~-----------~GGit~~~~ia~~A~~~gi-~~~~ 327 (418)
T 3r4e_A 300 ATVVG-----------AGGLTHLRRIADLASLYQV-RTGC 327 (418)
T ss_dssp CCTTT-----------TTHHHHHHHHHHHHHHTTC-EEEE
T ss_pred cCccc-----------cCCHHHHHHHHHHHHHcCC-EEee
Confidence 54422 3568899999999999999 6533
No 333
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=30.57 E-value=1.3e+02 Score=26.35 Aligned_cols=65 Identities=9% Similarity=0.065 Sum_probs=43.1
Q ss_pred CCCHHHHHHHHHHHHhCC----CCEEEEcC----Cc-----------cCccccHHHHHHHHhccCCCCcEEEEeCccchH
Q 022377 14 LLSLNEILRLAYLFVTSG----VDKIRLTG----GE-----------PTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA 74 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~----~~~v~~tG----GE-----------Pll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~ 74 (298)
-||.+|+.+++++..+.. ......++ |+ +-++|...++++++++. |+. +.|+|.|..
T Consensus 173 GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~gir~~p~~~eLi~~L~~~-G~~-v~IVSgg~~-- 248 (385)
T 4gxt_A 173 NYKTEEVYDLCKGAYASMKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEMVDLYRSLEEN-GID-CYIVSASFI-- 248 (385)
T ss_dssp TCCHHHHHHHHHHHHHHHTTSCCEEEEEECCSSCCSSCCCEEEEEECCEECHHHHHHHHHHHHT-TCE-EEEEEEEEH--
T ss_pred CCCHHHHHHHHHHHHHhccccccCceeeecccccccCceeEEeeccCceeCHHHHHHHHHHHHC-CCe-EEEEcCCcH--
Confidence 489999999988776521 11222222 11 23688899999999995 995 999998843
Q ss_pred hhHHHHHH
Q 022377 75 RKLPKLKE 82 (298)
Q Consensus 75 ~~~~~l~~ 82 (298)
+.++.+.+
T Consensus 249 ~~v~~ia~ 256 (385)
T 4gxt_A 249 DIVRAFAT 256 (385)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33444433
No 334
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=30.55 E-value=2.7e+02 Score=24.19 Aligned_cols=137 Identities=12% Similarity=0.021 Sum_probs=77.9
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhcc--CCCCcEEEEeCccch-Hh---hHHHHHHcCCCeE
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKL--KGLKTLAMTTNGLTL-AR---KLPKLKESGLTSV 88 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~--~~~~~v~i~TNG~ll-~~---~~~~l~~~~~~~v 88 (298)
.+.+++.+.+.++.+.|...+.+-.|.+-+.. -.++++.+++. .++. +.+.-|+... ++ .++.|.+.++.++
T Consensus 164 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~-~~e~v~avr~a~g~~~~-l~vDan~~~~~~~a~~~~~~l~~~~i~~i 241 (392)
T 1tzz_A 164 KGLSMLRGEMRGYLDRGYNVVKMKIGGAPIEE-DRMRIEAVLEEIGKDAQ-LAVDANGRFNLETGIAYAKMLRDYPLFWY 241 (392)
T ss_dssp -CHHHHHHHHHHHHTTTCSEEEEECSSSCHHH-HHHHHHHHHHHHTTTCE-EEEECTTCCCHHHHHHHHHHHTTSCCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCHHH-HHHHHHHHHHhcCCCCe-EEEECCCCCCHHHHHHHHHHHHHcCCCee
Confidence 37888888888888889999998866533222 24666666663 3564 8899998654 33 3555666678877
Q ss_pred EEecCCCCHHhhhhhcCC--------CcHHHHHHHHHHHHHcC----CCCEEEEEEEecCCCHhHHHHHHHHHhhCCCe
Q 022377 89 NISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVG----YNPVKVNCVVMRGFNDDEICDFVELTRDRPIN 155 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g----~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~ 155 (298)
.=-+...+-+.+..++.. .+. ...+.++.+.+.+ ...+ ++.-+.+-=-..+..++++++...|+.
T Consensus 242 EqP~~~~d~~~~~~l~~~~~iPIa~dE~~-~~~~~~~~~i~~~~~~~~~d~-v~ik~~~~GGit~~~~i~~~A~~~gi~ 318 (392)
T 1tzz_A 242 EEVGDPLDYALQAALAEFYPGPMATGENL-FSHQDARNLLRYGGMRPDRDW-LQFDCALSYGLCEYQRTLEVLKTHGWS 318 (392)
T ss_dssp ECCSCTTCHHHHHHHTTTCCSCEEECTTC-CSHHHHHHHHHHSCCCTTTCE-ECCCTTTTTCHHHHHHHHHHHHHTTCC
T ss_pred cCCCChhhHHHHHHHHhhCCCCEEECCCC-CCHHHHHHHHHcCCCccCCcE-EEECccccCCHHHHHHHHHHHHHCCCC
Confidence 644443344555555531 111 1122344444444 2021 122111100356777888888888774
No 335
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=30.49 E-value=2.3e+02 Score=24.64 Aligned_cols=96 Identities=15% Similarity=0.124 Sum_probs=64.5
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHc-CCCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKES-GLTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~-~~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++.. ++.+++..++ -|.++.++. ...+..+.+. .++.|+
T Consensus 200 n~~~~~~~A~~~~~~L~~~~i~~iE----qP~~~~d~~~-~~~l~~~~~i---PIa~dE~~~~~~~~~~~~~~~~~d~v~ 271 (385)
T 3i6e_A 200 NQGLEIDEAVPRVLDVAQFQPDFIE----QPVRAHHFEL-MARLRGLTDV---PLLADESVYGPEDMVRAAHEGICDGVS 271 (385)
T ss_dssp TTCCCGGGHHHHHHHHHTTCCSCEE----CCSCTTCHHH-HHHHHTTCSS---CEEESTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE----CCCCcccHHH-HHHHHHhCCC---CEEEeCCcCCHHHHHHHHHcCCCCEEE
Confidence 4456778888889998888877765 7986555544 4445553344 466777665 3455556554 477777
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
+.+.- .+++..+++.+..+.++|+ ++
T Consensus 272 ~k~~~-----------~GGit~~~~i~~~A~~~gi-~~ 297 (385)
T 3i6e_A 272 IKIMK-----------SGGLTRAQTVARIAAAHGL-MA 297 (385)
T ss_dssp ECHHH-----------HTSHHHHHHHHHHHHHTTC-EE
T ss_pred ecccc-----------cCCHHHHHHHHHHHHHcCC-EE
Confidence 65421 2568899999999999999 65
No 336
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=30.43 E-value=1.3e+02 Score=26.10 Aligned_cols=79 Identities=18% Similarity=0.206 Sum_probs=51.5
Q ss_pred CCCHHHHHHHHHHHHh--CCCCEEEEc-----C----CccCccccHH-HHHHHHhcc-------CCCCcEEEEeCccch-
Q 022377 14 LLSLNEILRLAYLFVT--SGVDKIRLT-----G----GEPTVRKDIE-EACFHLSKL-------KGLKTLAMTTNGLTL- 73 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~--~~~~~v~~t-----G----GEPll~~~~~-~ii~~~~~~-------~~~~~v~i~TNG~ll- 73 (298)
.-++|+..+++++... .|+..+..+ | |+|-|++++. ++-+.+.+. .++. +.+ --|+-+
T Consensus 181 yT~Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~~~~~~~~~~vp-LVl-HGgSG~p 258 (349)
T 3elf_A 181 YTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFD-FVF-HGGSGSL 258 (349)
T ss_dssp CCCHHHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHHHTCCTTCCCCC-EEE-CCCTTCC
T ss_pred CCCHHHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhhcCCccccCCCc-EEE-eCCCCCC
Confidence 4578999888887641 224555442 2 7899999966 665555321 1453 333 444445
Q ss_pred HhhHHHHHHcCCCeEEEecCC
Q 022377 74 ARKLPKLKESGLTSVNISLDT 94 (298)
Q Consensus 74 ~~~~~~l~~~~~~~v~iSldg 94 (298)
++.+++....|+..|+|+-|.
T Consensus 259 ~e~i~~ai~~GV~KiNi~Tdl 279 (349)
T 3elf_A 259 KSEIEEALRYGVVKMNVDTDT 279 (349)
T ss_dssp HHHHHHHHHTTEEEEEECHHH
T ss_pred HHHHHHHHHcCCEEEEcchHH
Confidence 678999999999999998554
No 337
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=30.36 E-value=2.4e+02 Score=23.54 Aligned_cols=127 Identities=14% Similarity=0.189 Sum_probs=79.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcC--CccCcc----c-c---HHHHHHHHhccCCCCcEEEEeCccchHhh
Q 022377 7 DLTPKPQLLSLNEILRLAYLFVTSGVDKIRLTG--GEPTVR----K-D---IEEACFHLSKLKGLKTLAMTTNGLTLARK 76 (298)
Q Consensus 7 ~~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tG--GEPll~----~-~---~~~ii~~~~~~~~~~~v~i~TNG~ll~~~ 76 (298)
+|.......+.+.+.+...++.+.|..-|.+.| ..|-.. . + +..+++.+++..++. ++|.|-- .+.
T Consensus 27 SFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~p-iSIDT~~---~~v 102 (282)
T 1aj0_A 27 SFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVW-ISVDTSK---PEV 102 (282)
T ss_dssp TSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCE-EEEECCC---HHH
T ss_pred ccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCe-EEEeCCC---HHH
Confidence 344556678899998888888888988877765 224321 1 1 456666666544774 8888754 355
Q ss_pred HHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEE-ecCCC--------------HhH
Q 022377 77 LPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV-MRGFN--------------DDE 141 (298)
Q Consensus 77 ~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi-~~~~n--------------~~~ 141 (298)
++.-.++|.+ +.=|+.+.. .+ +.++.+.++|. ++.+...- .+ .+ .+.
T Consensus 103 a~aAl~aGa~-iINdvsg~~------------d~---~~~~~~a~~~~-~vVlmh~~G~p-~tm~~~~~y~d~~~ev~~~ 164 (282)
T 1aj0_A 103 IRESAKVGAH-IINDIRSLS------------EP---GALEAAAETGL-PVCLMHMQGNP-KTMQEAPKYDDVFAEVNRY 164 (282)
T ss_dssp HHHHHHTTCC-EEEETTTTC------------ST---THHHHHHHHTC-CEEEECCSSCT-TCCSCCCCCSCHHHHHHHH
T ss_pred HHHHHHcCCC-EEEECCCCC------------CH---HHHHHHHHhCC-eEEEEccCCCC-ccccccCccchHHHHHHHH
Confidence 6666667888 555665521 11 22445667888 66554421 11 11 455
Q ss_pred HHHHHHHHhhCCCe
Q 022377 142 ICDFVELTRDRPIN 155 (298)
Q Consensus 142 i~~i~~~~~~~g~~ 155 (298)
+.+.++.+.+.|++
T Consensus 165 l~~~i~~a~~~Gi~ 178 (282)
T 1aj0_A 165 FIEQIARCEQAGIA 178 (282)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCC
Confidence 77788888888985
No 338
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=30.31 E-value=2e+02 Score=23.33 Aligned_cols=108 Identities=6% Similarity=0.026 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHhCCCCEEE--EcCCc--cCccccHHHHHHHHhccCCCCcEEEE-eCccchHhhHHHHHHcCCCeEEEe
Q 022377 17 LNEILRLAYLFVTSGVDKIR--LTGGE--PTVRKDIEEACFHLSKLKGLKTLAMT-TNGLTLARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 17 ~e~~~~~i~~~~~~~~~~v~--~tGGE--Pll~~~~~~ii~~~~~~~~~~~v~i~-TNG~ll~~~~~~l~~~~~~~v~iS 91 (298)
+..+.+.++.+.+.|...+. +--|. |.+.... ++++.+++.... .+.+- .|. ...++.+.++|.+.+.|.
T Consensus 25 ~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G~-~~v~~lr~~~~~-DvhLMv~~p---~~~i~~~~~aGAd~itvH 99 (237)
T 3cu2_A 25 WLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGA-IGIKYFPTHCFK-DVHLMVRNQ---LEVAKAVVANGANLVTLQ 99 (237)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCT-HHHHTSCTTSEE-EEEEECSCH---HHHHHHHHHTTCSEEEEE
T ss_pred cccHHHHHHHHHHcCCCEEEEEEecCccccchhhhH-HHHHHHhhhCCC-CeEEEEECH---HHHHHHHHHcCCCEEEEe
Confidence 33455557777777877654 44577 7665443 677777664322 35543 333 457899999999999988
Q ss_pred cCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc---------CCCCEEEEEEEecCCCHhHHHHHH
Q 022377 92 LDTLVPAKFEFLTRRKGHEKVMESINAAIEV---------GYNPVKVNCVVMRGFNDDEICDFV 146 (298)
Q Consensus 92 ldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~---------g~~~v~i~~vi~~~~n~~~i~~i~ 146 (298)
....+ ...+.++.+++. |. .+.+ .+.++...+.++++.
T Consensus 100 ~ea~~--------------~~~~~i~~i~~~~~~~~~~~~g~-~~gv--~l~p~Tp~~~l~~~l 146 (237)
T 3cu2_A 100 LEQYH--------------DFALTIEWLAKQKTTYANQVYPV-LIGA--CLCPETPISELEPYL 146 (237)
T ss_dssp TTCTT--------------SHHHHHHHHTTCEEEETTEEEEC-EEEE--EECTTSCGGGGTTTT
T ss_pred cCCcc--------------cHHHHHHHHHhcccccccccCCc-eEEE--EEeCCChHHHHHHHh
Confidence 76531 123556666677 76 5544 445533344454443
No 339
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=30.25 E-value=70 Score=26.97 Aligned_cols=76 Identities=16% Similarity=0.110 Sum_probs=47.8
Q ss_pred CCHHHHHHHHHHHHhCCCC---EEEEcCCccCc--------ccc-HHHHHHHHhccCCCCcEEEEeCccch----HhhHH
Q 022377 15 LSLNEILRLAYLFVTSGVD---KIRLTGGEPTV--------RKD-IEEACFHLSKLKGLKTLAMTTNGLTL----ARKLP 78 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~---~v~~tGGEPll--------~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll----~~~~~ 78 (298)
-+.+++.+.++.+.+.|+. .|.+.-+-|.. .++ +.++++.+++..++. +.+=..+.+. .+.++
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~P-v~vK~~~~~~~~~~~~~a~ 181 (314)
T 2e6f_A 103 LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLP-FGVKMPPYFDIAHFDTAAA 181 (314)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSC-EEEEECCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCC-EEEEECCCCCHHHHHHHHH
Confidence 4788899888888877766 67665554443 233 457888877643443 4443333222 23367
Q ss_pred HHHHcC-CCeEEEe
Q 022377 79 KLKESG-LTSVNIS 91 (298)
Q Consensus 79 ~l~~~~-~~~v~iS 91 (298)
.+.++| ++.|.++
T Consensus 182 ~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 182 VLNEFPLVKFVTCV 195 (314)
T ss_dssp HHHTCTTEEEEEEC
T ss_pred HHHhcCCceEEEEe
Confidence 778889 9988765
No 340
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=30.24 E-value=1.4e+02 Score=26.28 Aligned_cols=97 Identities=13% Similarity=0.098 Sum_probs=57.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++..++++.+.++++..+- ||+-..++ +-.+.+++..+ +-|.+...+. .+.++++.+.+ ++.|++
T Consensus 219 ~~~~~~~a~~~~~~l~~~~i~~iE----eP~~~~d~-~~~~~l~~~~~---iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 290 (410)
T 2qq6_A 219 GRFDIPSSIRFARAMEPFGLLWLE----EPTPPENL-DALAEVRRSTS---TPICAGENVYTRFDFRELFAKRAVDYVMP 290 (410)
T ss_dssp TCCCHHHHHHHHHHHGGGCCSEEE----CCSCTTCH-HHHHHHHTTCS---SCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCCCHHHHHHHHHHHhhcCCCeEE----CCCChhhH-HHHHHHHhhCC---CCEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 345777777777777777766554 67644333 33344444223 3455666555 34566666554 554444
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
.+. ..+++..+++.++.+.++|+ ++.+
T Consensus 291 k~~-----------~~GGite~~~ia~~A~~~g~-~~~~ 317 (410)
T 2qq6_A 291 DVA-----------KCGGLAEAKRIANLAELDYI-PFAP 317 (410)
T ss_dssp BHH-----------HHTHHHHHHHHHHHHHTTTC-CBCC
T ss_pred Ccc-----------ccCCHHHHHHHHHHHHHcCC-eEee
Confidence 321 12568888888899888988 6544
No 341
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=30.22 E-value=2.5e+02 Score=23.79 Aligned_cols=137 Identities=12% Similarity=0.105 Sum_probs=84.2
Q ss_pred CCCCHHHHHHHHHHHHhCCCCE-EEEcCCc-cCccccH-HHHHHHHhcc-CCCCcEEEEeC-ccchHhhHHHHHHcCCCe
Q 022377 13 QLLSLNEILRLAYLFVTSGVDK-IRLTGGE-PTVRKDI-EEACFHLSKL-KGLKTLAMTTN-GLTLARKLPKLKESGLTS 87 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~-v~~tGGE-Pll~~~~-~~ii~~~~~~-~~~~~v~i~TN-G~ll~~~~~~l~~~~~~~ 87 (298)
+-.+.|.+..+++.+.+.+.+. +.++-|. .....++ ..+++.+.+. .++. |.+.+. |.-+ +.+.+..++|+.+
T Consensus 23 Nv~n~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VP-ValHLDHg~~~-e~~~~ai~~GFtS 100 (307)
T 3n9r_A 23 NFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIP-VALHLDHGTTF-ESCEKAVKAGFTS 100 (307)
T ss_dssp ECSSHHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHSTTSC-EEEEEEEECSH-HHHHHHHHHTCSE
T ss_pred eeCCHHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHhcCCCc-EEEECCCCCCH-HHHHHHHHhCCCc
Confidence 3467889999999888877553 3344222 2222233 3666666553 4675 777654 4333 5566677889998
Q ss_pred EEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCC-----------HhHHHHHHHHHhhCCCee
Q 022377 88 VNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFN-----------DDEICDFVELTRDRPINI 156 (298)
Q Consensus 88 v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n-----------~~~i~~i~~~~~~~g~~~ 156 (298)
|.+.--..+-+ .+.+.+.+-++.+++.|+ .|+...=..-|.. +.+.++..+|+.+.|++.
T Consensus 101 VMiDgS~~p~e--------eNi~~Tk~vv~~ah~~gv-sVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~ 171 (307)
T 3n9r_A 101 VMIDASHHAFE--------ENLELTSKVVKMAHNAGV-SVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDY 171 (307)
T ss_dssp EEECCTTSCHH--------HHHHHHHHHHHHHHHTTC-EEEEEESCCCCC----------CCSCCHHHHHHHHHHHCCSE
T ss_pred EEEECCCCCHH--------HHHHHHHHHHHHHHHcCC-eEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHCCCE
Confidence 88854443222 235666777788888898 7776652221221 235788889998899874
Q ss_pred EEEe
Q 022377 157 RFIE 160 (298)
Q Consensus 157 ~~~~ 160 (298)
--+.
T Consensus 172 LAva 175 (307)
T 3n9r_A 172 LAPA 175 (307)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 4443
No 342
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=30.22 E-value=2.8e+02 Score=24.51 Aligned_cols=98 Identities=8% Similarity=0.009 Sum_probs=62.7
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..+- ||+-..++. -++.+++..++. |.+...+. ...++.+.+.+ ++.|+
T Consensus 234 N~~~~~~~A~~~~~~L~~~~i~~iE----qP~~~~d~~-~~~~l~~~~~iP---Ia~dE~~~~~~~~~~~i~~ga~d~v~ 305 (424)
T 3v3w_A 234 HHRLTPIEAARLGKALEPYHLFWME----DAVPAENQE-SFKLIRQHTTTP---LAVGEVFNSIHDCRELIQNQWIDYIR 305 (424)
T ss_dssp TTCCCHHHHHHHHHHHGGGCCSEEE----CCSCCSSTT-HHHHHHHHCCSC---EEECTTCCSGGGTHHHHHTTCCSEEC
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE----CCCChHhHH-HHHHHHhhCCCC---EEEccCcCCHHHHHHHHHcCCCCeEe
Confidence 3456888888888888888877665 787544433 334444433443 55666655 34566666654 66555
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
+.+.- .+++..+++....+.++|+ ++.+
T Consensus 306 ~k~~~-----------~GGit~~~~ia~~A~~~gi-~~~~ 333 (424)
T 3v3w_A 306 TTIVH-----------AGGISQMRRIADFASLFHV-RTGF 333 (424)
T ss_dssp CCTTT-----------TTHHHHHHHHHHHHHTTTC-EEEE
T ss_pred ecchh-----------cCCHHHHHHHHHHHHHcCC-EEEe
Confidence 54422 3568889999999999999 6533
No 343
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=30.11 E-value=2.3e+02 Score=23.28 Aligned_cols=123 Identities=14% Similarity=0.069 Sum_probs=72.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccc--cHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHc--CCCeEE
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRK--DIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKES--GLTSVN 89 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~--~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~--~~~~v~ 89 (298)
..+.+.+.+...++.+.|..-|.+.||-+.... ++.+++..+.+..++. ++|.|-= .+.++.-.++ |.+ +-
T Consensus 21 ~~~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~~~p-isIDT~~---~~v~~aAl~a~~Ga~-iI 95 (262)
T 1f6y_A 21 ERDPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNLT-LCLDSTN---IKAIEAGLKKCKNRA-MI 95 (262)
T ss_dssp HTCHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTCCSE-EEEECSC---HHHHHHHHHHCSSCE-EE
T ss_pred cCCHHHHHHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhCCCe-EEEeCCC---HHHHHHHHhhCCCCC-EE
Confidence 457788888888888889999999887544433 2667777777644774 8887752 3444444454 666 44
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecC--CCH----hHHHHHHHHHhhCCCe
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRG--FND----DEICDFVELTRDRPIN 155 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~--~n~----~~i~~i~~~~~~~g~~ 155 (298)
-|+.+. . +..-+-+..+.++|. ++.+...-.+| .+. +.+.+.++.+.+.|+.
T Consensus 96 Ndvs~~-~------------d~~~~~~~~~a~~~~-~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~ 153 (262)
T 1f6y_A 96 NSTNAE-R------------EKVEKLFPLAVEHGA-ALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLP 153 (262)
T ss_dssp EEECSC-H------------HHHHHHHHHHHHTTC-EEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCC
T ss_pred EECCCC-c------------ccHHHHHHHHHHhCC-cEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Confidence 455552 1 122233455677887 55433320011 232 2356777778888884
No 344
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=29.93 E-value=2.6e+02 Score=23.76 Aligned_cols=132 Identities=9% Similarity=0.033 Sum_probs=78.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEE-EEc-CCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHc-------
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKI-RLT-GGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKES------- 83 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v-~~t-GGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~------- 83 (298)
+-.+.|.+..+++.+.+.+.+.| .++ |+-.+....+...+..+.+..++. |.|.+.=-.-.+.+.+..++
T Consensus 33 Nv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g~~~~~~~~~~A~~~~VP-VaLHlDHg~~~e~i~~ai~~~~~~~~~ 111 (306)
T 3pm6_A 33 CVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYADSLLVRTAASACRAASVP-ITLHLDHAQDPEIIKRAADLSRSETHE 111 (306)
T ss_dssp ECSSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHTTHHHHHHHHHHHHCSSC-EEEEEEEECCHHHHHHHHHTC------
T ss_pred eeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccHHHHHHHHHHHHHCCCC-EEEEcCCCCCHHHHHHHHHhhhhccCC
Confidence 34678899999999988875543 344 332333233444444443435785 88766522223456777777
Q ss_pred -CCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEE-EEecC-----------CCHhHHHHHHHHHh
Q 022377 84 -GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNC-VVMRG-----------FNDDEICDFVELTR 150 (298)
Q Consensus 84 -~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~-vi~~~-----------~n~~~i~~i~~~~~ 150 (298)
|+.+|.+.--...-+ .+...+.+-++.++..|+ .|+... .+.-+ ..+.+.++..+|+
T Consensus 112 ~GFtSVMiDgS~~p~e--------ENi~~Tk~vv~~ah~~gv-sVEaElG~igG~Edgv~~~~~~~~~yT~Peea~~Fv- 181 (306)
T 3pm6_A 112 PGFDSIMVDMSHFSKE--------ENLRLTRELVAYCNARGI-ATEAEPGRIEGGEDGVQDTVDLEGVLTTPEESEEFV- 181 (306)
T ss_dssp CCCSEEEECCTTSCHH--------HHHHHHHHHHHHHHTTTC-EEEECSSBCCCCBTTBCCCTTCCCBCCCHHHHHHHH-
T ss_pred CCCCEEEEeCCCCCHH--------HHHHHHHHHHHHHHHcCC-eEEEEeeeeccccCCccccccccccCCCHHHHHHHH-
Confidence 888888754443222 135566667777777788 666543 22100 0124577788888
Q ss_pred hCCCe
Q 022377 151 DRPIN 155 (298)
Q Consensus 151 ~~g~~ 155 (298)
+.|++
T Consensus 182 ~TgvD 186 (306)
T 3pm6_A 182 ATGIN 186 (306)
T ss_dssp TTTCS
T ss_pred HcCCC
Confidence 68886
No 345
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=29.83 E-value=2.6e+02 Score=24.53 Aligned_cols=99 Identities=13% Similarity=0.087 Sum_probs=67.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..+- ||+-..++ +-++.+++..++ -|.++..+. ...++++.+.+ ++.|+
T Consensus 186 N~~~~~~~A~~~~~~L~~~~i~~iE----eP~~~~d~-~~~~~l~~~~~i---PIa~dE~i~~~~~~~~~l~~~a~d~v~ 257 (405)
T 3rr1_A 186 HGRVSAPMAKVLIKELEPYRPLFIE----EPVLAEQA-ETYARLAAHTHL---PIAAGERMFSRFDFKRVLEAGGVSILQ 257 (405)
T ss_dssp CSCBCHHHHHHHHHHHGGGCCSCEE----CSSCCSST-HHHHHHHTTCSS---CEEECTTCCSHHHHHHHHHHCCCSEEC
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE----CCCCcccH-HHHHHHHhcCCC---CEEecCCcCCHHHHHHHHHHhCCCeEE
Confidence 4557899999999999888877665 78864444 444555553344 466777666 34566666544 67665
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 130 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 130 (298)
+.+-- .+++..+++-...+.++|+ ++.+.
T Consensus 258 ~d~~~-----------~GGitea~kia~lA~~~gi-~v~~h 286 (405)
T 3rr1_A 258 PDLSH-----------AGGITECVKIAAMAEAYDV-ALAPH 286 (405)
T ss_dssp CBTTT-----------TTHHHHHHHHHHHHHTTTC-EECCB
T ss_pred EChhh-----------cCCHHHHHHHHHHHHHcCC-EEEeC
Confidence 55422 3568899999999999998 65443
No 346
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=29.83 E-value=1.7e+02 Score=25.08 Aligned_cols=136 Identities=11% Similarity=0.043 Sum_probs=75.6
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhcc--CCCCcEEEEeCccch-Hh---hHHHHHHcCCCeE
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKL--KGLKTLAMTTNGLTL-AR---KLPKLKESGLTSV 88 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~--~~~~~v~i~TNG~ll-~~---~~~~l~~~~~~~v 88 (298)
.+++++.+.+.++.+.|...|.+-.|.+-+.. ..++++.+++. .++. +.+.-|+... ++ .++.|.+.+++++
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~-~~e~v~avr~a~g~~~~-l~vDan~~~~~~~a~~~~~~l~~~~i~~i 220 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRIGYPALDQ-DLAVVRSIRQAVGDDFG-IMVDYNQSLDVPAAIKRSQALQQEGVTWI 220 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCCSSHHH-HHHHHHHHHHHHCSSSE-EEEECTTCSCHHHHHHHHHHHHHHTCSCE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCHHH-HHHHHHHHHHHhCCCCE-EEEECCCCCCHHHHHHHHHHHHHhCCCeE
Confidence 46777777777777889999998866532221 34677777663 3564 8899998654 33 4566777788877
Q ss_pred EEecCCCCHHhhhhhcCC--------CcHHHHHHHHHHHHHcCCCCEEEEEEEec-CCCHhHHHHHHHHHhhCCCe
Q 022377 89 NISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVELTRDRPIN 155 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~vi~~-~~n~~~i~~i~~~~~~~g~~ 155 (298)
.=.+...+-+.+..++.. .++.. .+.++.+.+.+...+ ++.-+.+ | ...+..++++++...|+.
T Consensus 221 E~P~~~~~~~~~~~l~~~~~iPI~~de~~~~-~~~~~~~i~~~~~d~-v~ik~~~~G-Gi~~~~~i~~~A~~~g~~ 293 (359)
T 1mdl_A 221 EEPTLQHDYEGHQRIQSKLNVPVQMGENWLG-PEEMFKALSIGACRL-AMPDAMKIG-GVTGWIRASALAQQFGIP 293 (359)
T ss_dssp ECCSCTTCHHHHHHHHHTCSSCEEECTTCCS-HHHHHHHHHTTCCSE-ECCBTTTTT-HHHHHHHHHHHHHHTTCC
T ss_pred ECCCChhhHHHHHHHHHhCCCCEEeCCCCCC-HHHHHHHHHcCCCCE-EeecchhhC-CHHHHHHHHHHHHHcCCe
Confidence 655443333444444321 11111 233344444432011 1211111 1 245666777777777764
No 347
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=29.68 E-value=71 Score=28.66 Aligned_cols=27 Identities=11% Similarity=0.118 Sum_probs=21.6
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEE
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRL 37 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~ 37 (298)
.++.++.+.++++|+.+..++...+.+
T Consensus 15 aR~f~~~~~ik~~ID~mA~~KlN~lH~ 41 (434)
T 2yl6_A 15 GRKYFSPEQLKEIIDKAKHYGYTDLHL 41 (434)
T ss_dssp TTSCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCeEEE
Confidence 456789999999999999877665543
No 348
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=29.66 E-value=1.7e+02 Score=25.45 Aligned_cols=14 Identities=21% Similarity=0.366 Sum_probs=6.3
Q ss_pred HHHHHHHHhccCCCC
Q 022377 48 IEEACFHLSKLKGLK 62 (298)
Q Consensus 48 ~~~ii~~~~~~~~~~ 62 (298)
..++++.+.+ .|+.
T Consensus 244 ~~~la~~l~~-~Gvd 257 (362)
T 4ab4_A 244 FTYVARELGK-RGIA 257 (362)
T ss_dssp HHHHHHHHHH-TTCS
T ss_pred HHHHHHHHHH-hCCC
Confidence 3344555544 2543
No 349
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=29.39 E-value=1.9e+02 Score=22.65 Aligned_cols=68 Identities=24% Similarity=0.216 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEe
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iS 91 (298)
+.+++..+++.+.+.|+..|.++- -.++-.+.++.+++ ..+. +...| .+..+.++...++|.+.+...
T Consensus 23 ~~~~~~~~~~~l~~gGv~~iel~~----k~~~~~~~i~~~~~-~~~~-~gag~--vl~~d~~~~A~~~GAd~v~~~ 90 (207)
T 2yw3_A 23 GGEDLLGLARVLEEEGVGALEITL----RTEKGLEALKALRK-SGLL-LGAGT--VRSPKEAEAALEAGAAFLVSP 90 (207)
T ss_dssp SCCCHHHHHHHHHHTTCCEEEEEC----SSTHHHHHHHHHTT-SSCE-EEEES--CCSHHHHHHHHHHTCSEEEES
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeC----CChHHHHHHHHHhC-CCCE-EEeCe--EeeHHHHHHHHHcCCCEEEcC
Confidence 455677788888888988888862 23445577888877 5552 44433 344788898999999977543
No 350
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=29.29 E-value=2.5e+02 Score=23.43 Aligned_cols=40 Identities=10% Similarity=0.041 Sum_probs=28.0
Q ss_pred HHHHHHHhCCCCEEEEcCCccCccc------cHHHHHHHHhccCCCC
Q 022377 22 RLAYLFVTSGVDKIRLTGGEPTVRK------DIEEACFHLSKLKGLK 62 (298)
Q Consensus 22 ~~i~~~~~~~~~~v~~tGGEPll~~------~~~~ii~~~~~~~~~~ 62 (298)
..++.+.+.|...|-+.++++...+ +..++-+.+.+ .|+.
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~-~gL~ 80 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDS-EGLE 80 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHH-TTCT
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHH-CCCC
Confidence 6788888899999999876654332 24466666666 4884
No 351
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=29.13 E-value=2.7e+02 Score=23.71 Aligned_cols=61 Identities=15% Similarity=0.226 Sum_probs=33.5
Q ss_pred HHHHhCCCCEEEEc---CCccCcccc---------HHHHHHHHhccC-CCCcEEEEeCccchHhhHHHHHHcCCCeEEE
Q 022377 25 YLFVTSGVDKIRLT---GGEPTVRKD---------IEEACFHLSKLK-GLKTLAMTTNGLTLARKLPKLKESGLTSVNI 90 (298)
Q Consensus 25 ~~~~~~~~~~v~~t---GGEPll~~~---------~~~ii~~~~~~~-~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~i 90 (298)
+...+.|+..|.+. || ++.++ +.++++.+++.. ++. +.....|. ...++.+.+.|++.+++
T Consensus 200 ~~~~~aGad~iqi~D~~~~--~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~-~ih~c~g~--~~~l~~l~~~g~d~~~~ 273 (353)
T 1j93_A 200 RYQADSGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDSVKLTHPNLP-LILYASGS--GGLLERLPLTGVDVVSL 273 (353)
T ss_dssp HHHHHTTCSEEEEECGGGG--GSCHHHHHHHTHHHHHHHHHHHHHHSTTCC-EEEECSSC--TTTGGGGGGGCCSEEEC
T ss_pred HHHHHhCCCEEEEeCcccc--cCCHHHHHHHhHHHHHHHHHHHHHhCCCCC-EEEECCCh--HHHHHHHHhcCCCEEEe
Confidence 33445687777663 33 56654 335566666532 554 43334443 23456666788986554
No 352
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=29.11 E-value=2.2e+02 Score=24.73 Aligned_cols=98 Identities=16% Similarity=0.091 Sum_probs=64.6
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHc-CCCeE
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKES-GLTSV 88 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~-~~~~v 88 (298)
.+.-.+.++..++++.+.++++..|- ||+-..++..+-+ +++..+ +-|.++-++. ...+..+.+. .++.|
T Consensus 200 aN~~~~~~~A~~~~~~l~~~~i~~iE----eP~~~~d~~~~~~-l~~~~~---ipIa~dE~~~~~~~~~~~~~~~a~d~v 271 (381)
T 3fcp_A 200 VNQAWDAATGAKGCRELAAMGVDLIE----QPVSAHDNAALVR-LSQQIE---TAILADEAVATAYDGYQLAQQGFTGAY 271 (381)
T ss_dssp CTTCBCHHHHHHHHHHHHHTTCSEEE----CCBCTTCHHHHHH-HHHHSS---SEEEESTTCCSHHHHHHHHHTTCCSEE
T ss_pred CCCCCCHHHHHHHHHHHhhcCcccee----CCCCcccHHHHHH-HHHhCC---CCEEECCCcCCHHHHHHHHHcCCCCEE
Confidence 34557888988999999888877764 7876556544433 444234 4466676655 3456666654 47777
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEE
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVK 128 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~ 128 (298)
++.+.- .+++..+++.+..+.++|+ ++.
T Consensus 272 ~~k~~~-----------~GGit~~~~ia~~A~~~gi-~~~ 299 (381)
T 3fcp_A 272 ALKIAK-----------AGGPNSVLALARVAQAAGI-GLY 299 (381)
T ss_dssp EECHHH-----------HTSTTHHHHHHHHHHHHTC-EEE
T ss_pred Eecccc-----------cCCHHHHHHHHHHHHHcCC-cee
Confidence 765421 2457788888889999999 653
No 353
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=28.87 E-value=2.6e+02 Score=23.45 Aligned_cols=163 Identities=10% Similarity=0.081 Sum_probs=97.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCC-EEEEcCCc-cCcccc-HHHHHHHHhccCCCCcEEEEeC-ccchHhhHHHHHHcCCCeE
Q 022377 13 QLLSLNEILRLAYLFVTSGVD-KIRLTGGE-PTVRKD-IEEACFHLSKLKGLKTLAMTTN-GLTLARKLPKLKESGLTSV 88 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~-~v~~tGGE-Pll~~~-~~~ii~~~~~~~~~~~v~i~TN-G~ll~~~~~~l~~~~~~~v 88 (298)
+-.+.|.+..+++.+.+.+.+ -+.++-|+ -+.-.+ +..++..+.+..++. |.+.+. |.- -+.+.+..++|+.+|
T Consensus 24 Nv~n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~VP-ValHlDHg~~-~e~i~~ai~~GFtSV 101 (286)
T 1gvf_A 24 NIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMP-LALHLDHHES-LDDIRRKVHAGVRSA 101 (286)
T ss_dssp ECCSHHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTTSC-BEEEEEEECC-HHHHHHHHHTTCCEE
T ss_pred eeCCHHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCCCc-EEEEcCCCCC-HHHHHHHHHcCCCeE
Confidence 456789999999998887654 45566444 333222 446666655556775 877665 322 356777788899988
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCC-----------HhHHHHHHHHHhhCCCeeE
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFN-----------DDEICDFVELTRDRPINIR 157 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n-----------~~~i~~i~~~~~~~g~~~~ 157 (298)
.+.--...-+ .+.+.+.+-++.+++.|+ .|+...=...|.. +.+.++..+|+.+.|++.-
T Consensus 102 MiDgS~lp~e--------eNi~~Tk~vv~~ah~~gv-sVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~L 172 (286)
T 1gvf_A 102 MIDGSHFPFA--------ENVKLVKSVVDFCHSQDC-SVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSL 172 (286)
T ss_dssp EECCTTSCHH--------HHHHHHHHHHHHHHHTTC-EEEEEESCCC-----------CCSSCCHHHHHHHHHHHCCSEE
T ss_pred EECCCCCCHH--------HHHHHHHHHHHHHHHcCC-EEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHCCCEE
Confidence 8765443222 235566677788888888 7776652222211 2447889999999999844
Q ss_pred EEeeecCCCCCCcccCCCCHHHHHHHHHHhC
Q 022377 158 FIEFMPFDGNVWNVKKLVPYAEMLDTVVKKF 188 (298)
Q Consensus 158 ~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~~ 188 (298)
-+.+-...+. +...+.+.++ .++.|.+..
T Consensus 173 AvaiGt~HG~-Y~~~p~Ld~~-~L~~I~~~~ 201 (286)
T 1gvf_A 173 AVAIGTAHGL-YSKTPKIDFQ-RLAEIREVV 201 (286)
T ss_dssp EECSSCCSSC-CSSCCCCCHH-HHHHHHHHC
T ss_pred EeecCccccC-cCCCCccCHH-HHHHHHHhc
Confidence 3333322221 2223446654 456666654
No 354
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=28.87 E-value=2.9e+02 Score=24.11 Aligned_cols=100 Identities=11% Similarity=0.069 Sum_probs=67.1
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..+- ||+-..++.. .+.+++..++. |.+..++. ...++.+.+.+ ++.|+
T Consensus 218 N~~~~~~~A~~~~~~L~~~~i~~iE----eP~~~~~~~~-~~~l~~~~~iP---Ia~dE~~~~~~~~~~~l~~~a~d~v~ 289 (400)
T 4dxk_A 218 HSMWQLLPAMQIAKALTPYQTFWHE----DPIKMDSLSS-LTRYAAVSPAP---ISASETLGSRWAFRDLLETGAAGVVM 289 (400)
T ss_dssp TTCBCHHHHHHHHHHTGGGCCSEEE----CCBCTTSGGG-HHHHHHHCSSC---EEECTTCCHHHHHHHHHHTTCCCEEE
T ss_pred CCCCCHHHHHHHHHHHhhcCCCEEE----cCCCcccHHH-HHHHHHhCCCC---EEecCCcCCHHHHHHHHHcCCCCEEE
Confidence 4557888988888888888877776 7876544433 34444433553 55666655 34566676655 67777
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNC 131 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~ 131 (298)
+.+-- .+++...++-...+..+|+ ++.+..
T Consensus 290 ~d~~~-----------~GGit~~~kia~~A~~~gi-~~~~h~ 319 (400)
T 4dxk_A 290 LDISW-----------CGGLSEARKIASMAEAWHL-PVAPHX 319 (400)
T ss_dssp ECTTT-----------TTHHHHHHHHHHHHHHTTC-CEEEC-
T ss_pred eCccc-----------cCCHHHHHHHHHHHHHcCC-EEEecC
Confidence 76532 3568899999999999999 775543
No 355
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=28.82 E-value=2.8e+02 Score=24.34 Aligned_cols=83 Identities=16% Similarity=0.158 Sum_probs=50.1
Q ss_pred hhHHHHHHc-CCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecC-------CCH----hHH
Q 022377 75 RKLPKLKES-GLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRG-------FND----DEI 142 (298)
Q Consensus 75 ~~~~~l~~~-~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~-------~n~----~~i 142 (298)
..++.+++. |++.|.++++-... ...-+.+.+.+--+.+.++|+ .+.....+... .+. +.+
T Consensus 34 ~~L~~i~q~~G~~gIe~~l~~~~~------g~~w~~~~i~~lk~~l~~~GL-~i~~i~s~~~~~~i~~~~~~r~~~ie~~ 106 (386)
T 3bdk_A 34 VTLEEIKAIPGMQGIVTAVYDVPV------GQAWPLENILELKKMVEEAGL-EITVIESIPVHEDIKQGKPNRDALIENY 106 (386)
T ss_dssp SCHHHHHTSTTCCEEEECCCSSCS------SSCCCHHHHHHHHHHHHTTTC-EEEEEECCCCCHHHHTTCTTHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEeCCcccCC------CCCCCHHHHHHHHHHHHHcCC-EEEEEeccccccccccCcHHHHHHHHHH
Confidence 478999999 99999999864321 011123455444455556788 55433221110 111 347
Q ss_pred HHHHHHHhhCCCeeEEEeeecC
Q 022377 143 CDFVELTRDRPINIRFIEFMPF 164 (298)
Q Consensus 143 ~~i~~~~~~~g~~~~~~~~~p~ 164 (298)
.+.++.+.++|+++...+|+|+
T Consensus 107 k~~i~~aa~lGi~~v~~nf~p~ 128 (386)
T 3bdk_A 107 KTSIRNVGAAGIPVVCYNFMPV 128 (386)
T ss_dssp HHHHHHHHTTTCCEEEECCCSS
T ss_pred HHHHHHHHHcCCCEEEEcCccc
Confidence 7788888889997655577874
No 356
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=28.65 E-value=1.7e+02 Score=24.89 Aligned_cols=118 Identities=11% Similarity=0.004 Sum_probs=65.4
Q ss_pred CCCCCCCCCHHHHH----HHHHHHHhCCCCEEEEcC--CccC----------cc-ccHHHHHHHHhccCCCCcEEEEeC-
Q 022377 8 LTPKPQLLSLNEIL----RLAYLFVTSGVDKIRLTG--GEPT----------VR-KDIEEACFHLSKLKGLKTLAMTTN- 69 (298)
Q Consensus 8 ~~~~~~~l~~e~~~----~~i~~~~~~~~~~v~~tG--GEPl----------l~-~~~~~ii~~~~~~~~~~~v~i~TN- 69 (298)
+-|++..-+.|.+. +.++.+..+++..+..+| ||-. .. -+...++..+++..++..+.-.|-
T Consensus 20 ~fPPk~~~~~e~l~~~a~~~l~~l~~l~pdf~v~Yga~g~s~r~~~~rt~~f~~T~d~~~~~~~i~~~~gi~~v~Hltc~ 99 (315)
T 3ijd_A 20 ITPPKKNNTEEKIKEISQKHIERISGLDIDGLVIYDLQDEKERVSEERPFPFIETIDPQIYSENYLKDLKIPKIIYRCVG 99 (315)
T ss_dssp ECCCBSSSCHHHHHHHHHHHHHHHHTSCCSEEEECCCC-------------CCCBCCHHHHHHHHCTTSCSCEEEEEEGG
T ss_pred eeCcCCCccHHHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCCCCCccccccccHHHHHHHHHHHhCCCceeeeeeC
Confidence 35778888999988 678899999887776665 6622 11 234556766666557753333333
Q ss_pred ccch---HhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEec
Q 022377 70 GLTL---ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMR 135 (298)
Q Consensus 70 G~ll---~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~ 135 (298)
+..- .+.+..+.++|+..| |-|..+.-. ....+|..+.+. +++.+- .+.|.....|
T Consensus 100 ~~t~~ei~~~L~~~~~~GI~ni---LRGDpp~~~---~~~~~~~~A~~l---~~~~~~-~F~IGvA~yP 158 (315)
T 3ijd_A 100 KYTPDEFRRLTRPVSGQDAFSV---FVGAASRNQ---SVLLKLSDAYKI---RQDVNP-DLLLGGVAIP 158 (315)
T ss_dssp GSCHHHHHHHHSCCTTCCCEEE---EECCCC-------CCSCHHHHHHH---HHHHCT-TSEEEEEECG
T ss_pred CCCHHHHHHHHHHHHHcCCcEE---ecCCCCCCC---CCCcCHHHHHHH---HHhcCC-CEEEEEEECC
Confidence 3322 234555566677665 355222211 122347666543 334444 5677777776
No 357
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=28.63 E-value=1.9e+02 Score=25.71 Aligned_cols=99 Identities=11% Similarity=0.075 Sum_probs=64.6
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++. -++.+++..++ -|.+...+. ...++.+.+.+ ++.|+
T Consensus 211 n~~~t~~~A~~~~~~Le~~~i~~iE----eP~~~~~~~-~~~~l~~~~~i---PIa~dE~~~~~~~~~~~l~~g~~D~v~ 282 (433)
T 3rcy_A 211 HGQFTTAGAIRLGQAIEPYSPLWYE----EPVPPDNVG-AMAQVARAVRI---PVATGERLTTKAEFAPVLREGAAAILQ 282 (433)
T ss_dssp CSCBCHHHHHHHHHHHGGGCCSEEE----CCSCTTCHH-HHHHHHHHSSS---CEEECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred CCCCCHHHHHHHHHHhhhcCCCEEE----CCCChhhHH-HHHHHHhccCC---CEEecCCCCCHHHHHHHHHcCCCCEEE
Confidence 4557888888888888888877775 787654443 34445543344 356777665 34667777655 66555
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 130 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 130 (298)
+.+. ..+++..+++-...+..+|+ ++...
T Consensus 283 ~d~~-----------~~GGit~~~kia~lA~~~gv-~~~~h 311 (433)
T 3rcy_A 283 PALG-----------RAGGIWEMKKVAAMAEVYNA-QMAPH 311 (433)
T ss_dssp CCHH-----------HHTHHHHHHHHHHHHHTTTC-EECCC
T ss_pred eCch-----------hcCCHHHHHHHHHHHHHcCC-EEEec
Confidence 4431 12567888888888888998 55433
No 358
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=28.54 E-value=3.3e+02 Score=24.51 Aligned_cols=71 Identities=18% Similarity=0.222 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhCCCCEEEEcC--CccCccccHHHHHHHHhccC-CCCcEEEEeCccchHhhHHHHHHcCCCeEEEecCC
Q 022377 18 NEILRLAYLFVTSGVDKIRLTG--GEPTVRKDIEEACFHLSKLK-GLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDT 94 (298)
Q Consensus 18 e~~~~~i~~~~~~~~~~v~~tG--GEPll~~~~~~ii~~~~~~~-~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSldg 94 (298)
+++.+.+..+.+.|+..|.+.. |.| ....++++.+++.. ++. +.+ -|+ ...+.++.+.++|.+.|.+|..+
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G~~---~~~~e~i~~i~~~~p~~p-vi~-g~~-~t~e~a~~l~~~G~d~I~v~~~~ 309 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHGHS---RRVIETLEMIKADYPDLP-VVA-GNV-ATPEGTEALIKAGADAVKVGVGP 309 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCSS---HHHHHHHHHHHHHCTTSC-EEE-EEE-CSHHHHHHHHHTTCSEEEECSSC
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCCch---HHHHHHHHHHHHHCCCce-EEe-CCc-CCHHHHHHHHHcCCCEEEEcCCC
Confidence 3445567777788888888743 432 24567888887754 564 544 333 22456788889999999998765
No 359
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=28.47 E-value=97 Score=24.86 Aligned_cols=60 Identities=13% Similarity=0.051 Sum_probs=37.8
Q ss_pred CCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCe
Q 022377 85 LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPIN 155 (298)
Q Consensus 85 ~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~ 155 (298)
++-|.+.+||. ..+. ......+.++|+.+++.|+ ++.+-+ |........+.+.+.++|+.
T Consensus 6 ~kli~~DlDGT---Ll~~---~~~~~~~~~ai~~l~~~Gi-~v~laT----grs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 6 YKGYLIDLDGT---MYNG---TEKIEEACEFVRTLKDRGV-PYLFVT----NNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp CSEEEEECSSS---TTCH---HHHHHHHHHHHHHHHHTTC-CEEEEE----SCCSSCHHHHHHHHHHTTCC
T ss_pred CCEEEEeCcCc---eEeC---CEeCccHHHHHHHHHHCCC-eEEEEe----CCCCCCHHHHHHHHHHcCCC
Confidence 56789999994 2221 1235678999999999999 775443 21222334455556666663
No 360
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=28.38 E-value=1.5e+02 Score=25.27 Aligned_cols=125 Identities=15% Similarity=0.021 Sum_probs=66.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcC-----CccCcccc----HHHHHHHHhccC-CCCcEEEEeCccchHhhH
Q 022377 8 LTPKPQLLSLNEILRLAYLFVTSGVDKIRLTG-----GEPTVRKD----IEEACFHLSKLK-GLKTLAMTTNGLTLARKL 77 (298)
Q Consensus 8 ~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tG-----GEPll~~~----~~~ii~~~~~~~-~~~~v~i~TNG~ll~~~~ 77 (298)
|-..+..++.+.+.+...++.+.|..-|.+.| |+|.--.+ +..+++.+++.. ++. ++|.|-= .+.+
T Consensus 55 Fsdgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vp-ISIDT~~---~~Va 130 (318)
T 2vp8_A 55 FYDKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQL-ISVDTWR---AQVA 130 (318)
T ss_dssp ---------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCE-EEEECSC---HHHH
T ss_pred ccCCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCe-EEEeCCC---HHHH
Confidence 34445567888888888888889988787765 43222122 344566666543 674 8887643 3445
Q ss_pred HHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCC---C------H---------
Q 022377 78 PKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGF---N------D--------- 139 (298)
Q Consensus 78 ~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~---n------~--------- 139 (298)
+.-.++|.+ +.-|+.+.+ + + +.++.+.++|. .+.+... +|. + +
T Consensus 131 eaAl~aGa~-iINDVsg~~-d-----------~---~m~~vaa~~g~-~vVlmh~--~G~~p~tmq~~~~y~~~~~dv~~ 191 (318)
T 2vp8_A 131 KAACAAGAD-LINDTWGGV-D-----------P---AMPEVAAEFGA-GLVCAHT--GGALPRTRPFRVSYGTTTRGVVD 191 (318)
T ss_dssp HHHHHHTCC-EEEETTSSS-S-----------T---THHHHHHHHTC-EEEEECC---------------CCSCHHHHHH
T ss_pred HHHHHhCCC-EEEECCCCC-c-----------h---HHHHHHHHhCC-CEEEECC--CCCCccccccccccccccccHHH
Confidence 555566888 666776632 1 1 23455667888 6554432 221 1 1
Q ss_pred ---hHHHHHHHHHhhCCCe
Q 022377 140 ---DEICDFVELTRDRPIN 155 (298)
Q Consensus 140 ---~~i~~i~~~~~~~g~~ 155 (298)
+.+.+.++.+.+.|+.
T Consensus 192 ev~~~l~~~i~~a~~aGI~ 210 (318)
T 2vp8_A 192 AVISQVTAAAERAVAAGVA 210 (318)
T ss_dssp HHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHcCCC
Confidence 3455667777788884
No 361
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=28.31 E-value=2.6e+02 Score=23.23 Aligned_cols=46 Identities=26% Similarity=0.247 Sum_probs=28.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccCccc-------c-HHHHHHHHhccCCCCcEE
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRK-------D-IEEACFHLSKLKGLKTLA 65 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~-------~-~~~ii~~~~~~~~~~~v~ 65 (298)
.+.++. ++.+.+.|...|.+.+..+.+.+ . +.++.+.+++ .|+. +.
T Consensus 15 ~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~-i~ 68 (340)
T 2zds_A 15 LPLEEV---CRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDK-YGLK-CW 68 (340)
T ss_dssp SCHHHH---HHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHH-TTCE-EE
T ss_pred CCHHHH---HHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHH-cCCe-EE
Confidence 455554 56666779999999864223321 2 4467777777 4886 54
No 362
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=28.19 E-value=2e+02 Score=23.94 Aligned_cols=77 Identities=16% Similarity=0.077 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCccCc-------------cc--------cHHHHHHHHhccCCCCcEEEEeCccc-h-
Q 022377 17 LNEILRLAYLFVTSGVDKIRLTGGEPTV-------------RK--------DIEEACFHLSKLKGLKTLAMTTNGLT-L- 73 (298)
Q Consensus 17 ~e~~~~~i~~~~~~~~~~v~~tGGEPll-------------~~--------~~~~ii~~~~~~~~~~~v~i~TNG~l-l- 73 (298)
.+.+.+.++.+..+|+..|.+..|-+.. .. .+.++++.+.+. |+. +.+.+.... +
T Consensus 110 ~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~-Gv~-l~lEn~~~~~~~ 187 (340)
T 2zds_A 110 AAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAE-GVR-FAHEVHPSEIAY 187 (340)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHH-TCE-EEEECCTTSSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHc-CCE-EEEEcCCCcccC
Confidence 4567788888888999998886544320 01 133455556664 885 888875422 1
Q ss_pred -HhhHHHHHH-cC-CCeEEEecCCC
Q 022377 74 -ARKLPKLKE-SG-LTSVNISLDTL 95 (298)
Q Consensus 74 -~~~~~~l~~-~~-~~~v~iSldg~ 95 (298)
.+.+..+.+ .+ -..+.+-+|..
T Consensus 188 ~~~~~~~ll~~v~~~~~vg~~~D~~ 212 (340)
T 2zds_A 188 DYWTTHRALEAVGHRPAFGLNFDPS 212 (340)
T ss_dssp SHHHHHHHHHHTTTCTTEEEEECCH
T ss_pred CHHHHHHHHHhcCCCCCeeEEEchh
Confidence 233444444 34 45699999884
No 363
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=28.14 E-value=2.3e+02 Score=22.65 Aligned_cols=129 Identities=16% Similarity=0.100 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCCEEEEcCCcc---CccccHHHHHHHHhccCCCCcEEEEeCcc--------------chHhhHHHHHH
Q 022377 20 ILRLAYLFVTSGVDKIRLTGGEP---TVRKDIEEACFHLSKLKGLKTLAMTTNGL--------------TLARKLPKLKE 82 (298)
Q Consensus 20 ~~~~i~~~~~~~~~~v~~tGGEP---ll~~~~~~ii~~~~~~~~~~~v~i~TNG~--------------ll~~~~~~l~~ 82 (298)
+...++.+.+.|...|.+....| .-..+..++.+.+.+. |+. +...+-.. .+.+.++....
T Consensus 18 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~-gl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~ 95 (281)
T 3u0h_A 18 LVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRR-GLV-LANLGLPLNLYDSEPVFLRELSLLPDRARLCAR 95 (281)
T ss_dssp HHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTT-TCE-ECCEECCSCTTSCHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHc-CCc-eEEecccccccCCCHHHHHHHHHHHHHHHHHHH
Q ss_pred cCCCeEEEec----CCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEE-----------EecCCCHhHHHHHHH
Q 022377 83 SGLTSVNISL----DTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCV-----------VMRGFNDDEICDFVE 147 (298)
Q Consensus 83 ~~~~~v~iSl----dg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~v-----------i~~~~n~~~i~~i~~ 147 (298)
.|...|.+.+ +...++.++.... ..-+..+.+.+.|+ .+.+... +.. +.+++.++++
T Consensus 96 lG~~~v~~~~~p~~~~~~~~~~~~~~~-----~l~~l~~~a~~~Gv-~l~lE~~~~~~~~~~~~~~~~--~~~~~~~l~~ 167 (281)
T 3u0h_A 96 LGARSVTAFLWPSMDEEPVRYISQLAR-----RIRQVAVELLPLGM-RVGLEYVGPHHLRHRRYPFVQ--SLADLKTFWE 167 (281)
T ss_dssp TTCCEEEEECCSEESSCHHHHHHHHHH-----HHHHHHHHHGGGTC-EEEEECCCCGGGCCSSEECCC--SHHHHHHHHH
T ss_pred cCCCEEEEeecCCCCCcchhhHHHHHH-----HHHHHHHHHHHcCC-EEEEEeccccccccccccccC--CHHHHHHHHH
Q ss_pred HHhhCCCeeEE
Q 022377 148 LTRDRPINIRF 158 (298)
Q Consensus 148 ~~~~~g~~~~~ 158 (298)
-+..-.+.+.+
T Consensus 168 ~v~~~~vg~~~ 178 (281)
T 3u0h_A 168 AIGAPNVGALV 178 (281)
T ss_dssp HHCCTTEEEEE
T ss_pred HcCCCCeeEEe
No 364
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=28.11 E-value=2.4e+02 Score=24.71 Aligned_cols=140 Identities=11% Similarity=0.054 Sum_probs=78.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcC------CccCc---------------ccc-HHHHHHHHhcc--CCCCcEEEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTG------GEPTV---------------RKD-IEEACFHLSKL--KGLKTLAMT 67 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tG------GEPll---------------~~~-~~~ii~~~~~~--~~~~~v~i~ 67 (298)
.+.++.+++.+.+.++.+.|...|.+-. |-+++ +.+ ..++++.+++. .++. +.+.
T Consensus 146 ~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~-l~vD 224 (410)
T 2gl5_A 146 HILVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDAD-IIVE 224 (410)
T ss_dssp SCCCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSE-EEEE
T ss_pred cccCCHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCE-EEEE
Confidence 3456899998888888888988888764 54322 223 34777777763 3564 8899
Q ss_pred eCccch-Hh---hHHHHHHcCCCeEEEecCCCCHHhhhhhcCC--------CcHHHHHHHHHHHHHcCCCCEEEEEEEec
Q 022377 68 TNGLTL-AR---KLPKLKESGLTSVNISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMR 135 (298)
Q Consensus 68 TNG~ll-~~---~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~vi~~ 135 (298)
-|+... ++ .++.|.+.+++++.=.+...+-+.+..++.. .++. ..+.++.+.+.+...+ ++.-+.+
T Consensus 225 an~~~~~~~ai~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~~~~d~-v~ik~~~ 302 (410)
T 2gl5_A 225 IHSLLGTNSAIQFAKAIEKYRIFLYEEPIHPLNSDNMQKVSRSTTIPIATGERSY-TRWGYRELLEKQSIAV-AQPDLCL 302 (410)
T ss_dssp CTTCSCHHHHHHHHHHHGGGCEEEEECSSCSSCHHHHHHHHHHCSSCEEECTTCC-TTHHHHHHHHTTCCSE-ECCCTTT
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCeEECCCChhhHHHHHHHHhhCCCCEEecCCcC-CHHHHHHHHHcCCCCE-EecCccc
Confidence 998654 33 3455666677766644443334444444421 1111 1234444444443121 1221111
Q ss_pred -CCCHhHHHHHHHHHhhCCCe
Q 022377 136 -GFNDDEICDFVELTRDRPIN 155 (298)
Q Consensus 136 -~~n~~~i~~i~~~~~~~g~~ 155 (298)
| -..+..++++++...|+.
T Consensus 303 ~G-Git~~~~ia~~A~~~gi~ 322 (410)
T 2gl5_A 303 CG-GITEGKKICDYANIYDTT 322 (410)
T ss_dssp TT-HHHHHHHHHHHHHTTTCE
T ss_pred cC-CHHHHHHHHHHHHHcCCe
Confidence 1 245667788888887775
No 365
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=28.07 E-value=3e+02 Score=23.94 Aligned_cols=137 Identities=12% Similarity=0.012 Sum_probs=82.7
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCcccc-HHHHHHHHhcc--CCCCcEEEEeCccch-Hh---hHHHHHHcCCC
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTL-AR---KLPKLKESGLT 86 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll-~~---~~~~l~~~~~~ 86 (298)
..+.|++.+.++++.+.|.+.+.+--|- .++ -.++++.+++. .++. +.+.-|+... ++ .++.|.+.++.
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKvG~---~~~~d~~~v~avR~a~g~d~~-l~vDan~~~~~~~A~~~~~~l~~~~i~ 224 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKVGR---APRKDAANLRAMRQRVGADVE-ILVDANQSLGRHDALAMLRILDEAGCY 224 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCS---CHHHHHHHHHHHHHHHCTTSE-EEEECTTCCCHHHHHHHHHHHHHTTCS
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeeccCC---CHHHHHHHHHHHHHHcCCCce-EEEECCCCcCHHHHHHHHHHHHhcCCC
Confidence 4678898888888888899988886332 233 34667777663 3564 8899998765 33 35777778898
Q ss_pred eEEEecCCCCHHhhhhhc-CCC--------cHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCee
Q 022377 87 SVNISLDTLVPAKFEFLT-RRK--------GHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 87 ~v~iSldg~~~~~~~~ir-~~~--------~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~~ 156 (298)
+|.=.+...+.+.+..++ ... +. ...+.++.+.+.+...+ ++.-+.+-=...+..++++++...|+.+
T Consensus 225 ~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~i-~~~~~~~~~i~~~~~d~-v~ik~~~~GGit~~~~ia~~A~~~gi~~ 301 (389)
T 3ozy_A 225 WFEEPLSIDDIEGHRILRAQGTPVRIATGENL-YTRNAFNDYIRNDAIDV-LQADASRAGGITEALAISASAASAHLAW 301 (389)
T ss_dssp EEESCSCTTCHHHHHHHHTTCCSSEEEECTTC-CHHHHHHHHHHTTCCSE-ECCCTTTSSCHHHHHHHHHHHHHTTCEE
T ss_pred EEECCCCcccHHHHHHHHhcCCCCCEEeCCCC-CCHHHHHHHHHcCCCCE-EEeCccccCCHHHHHHHHHHHHHcCCEE
Confidence 887555544455565665 321 11 12234444444443121 2322222014677778888888888753
No 366
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=27.99 E-value=2.4e+02 Score=22.80 Aligned_cols=104 Identities=18% Similarity=0.156 Sum_probs=57.6
Q ss_pred HHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEE-EEeC--ccch--------------HhhHHHHHH
Q 022377 20 ILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLA-MTTN--GLTL--------------ARKLPKLKE 82 (298)
Q Consensus 20 ~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~-i~TN--G~ll--------------~~~~~~l~~ 82 (298)
+...++.+.+.|...|.+.+..+ ..++.++-+.+++ .|+. +. +.+. +.+. .+.++....
T Consensus 40 ~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~~~l~~-~gl~-v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~ 115 (287)
T 3kws_A 40 LNEKLDFMEKLGVVGFEPGGGGL--AGRVNEIKQALNG-RNIK-VSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGE 115 (287)
T ss_dssp HHHHHHHHHHTTCCEEECBSTTC--GGGHHHHHHHHTT-SSCE-ECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecCCch--HHHHHHHHHHHHH-cCCe-EEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 44557777788999999987643 3456677777777 4885 54 3331 1111 123444555
Q ss_pred cCCCeEEEecCCCCHHhhh-hh-cCCCcHHHHHHHHHHHH----HcCCCCEEEEE
Q 022377 83 SGLTSVNISLDTLVPAKFE-FL-TRRKGHEKVMESINAAI----EVGYNPVKVNC 131 (298)
Q Consensus 83 ~~~~~v~iSldg~~~~~~~-~i-r~~~~~~~v~~~i~~l~----~~g~~~v~i~~ 131 (298)
.|...|.+.. |... ++ .. .....++.+.+.++.+. ++|+ .+.+..
T Consensus 116 lGa~~v~~~~-g~~~--~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE~ 166 (287)
T 3kws_A 116 LGSTGVIIVP-AFNG--QVPALPHTMETRDFLCEQFNEMGTFAAQHGT-SVIFEP 166 (287)
T ss_dssp TTCSEEEECS-CCTT--CCSBCCSSHHHHHHHHHHHHHHHHHHHHTTC-CEEECC
T ss_pred cCCCEEEEec-CcCC--cCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-EEEEEe
Confidence 6888887742 2111 10 00 01122666666665554 4577 666654
No 367
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=27.84 E-value=1.7e+02 Score=25.33 Aligned_cols=99 Identities=12% Similarity=0.101 Sum_probs=62.7
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++.. ++.+++..++ -|.++..+. ...++.+.+.+ ++.|+
T Consensus 199 n~~~~~~~A~~~~~~l~~~~i~~iE----qP~~~~d~~~-~~~l~~~~~i---pIa~dE~~~~~~~~~~~i~~~~~d~v~ 270 (377)
T 3my9_A 199 NQALTPFGAMKILRDVDAFRPTFIE----QPVPRRHLDA-MAGFAAALDT---PILADESCFDAVDLMEVVRRQAADAIS 270 (377)
T ss_dssp TTCCCTTTHHHHHHHHHTTCCSCEE----CCSCTTCHHH-HHHHHHHCSS---CEEESTTCSSHHHHHHHHHHTCCSEEE
T ss_pred CCCcCHHHHHHHHHHHhhcCCCEEE----CCCCccCHHH-HHHHHHhCCC---CEEECCccCCHHHHHHHHHcCCCCEEE
Confidence 3445677777888888888776665 7876545443 3444443344 356677655 34556665544 66666
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 130 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 130 (298)
+.+. ..+++...++.+..+.++|+ ++.+.
T Consensus 271 ~k~~-----------~~GGit~~~~i~~~a~~~gi-~~~~~ 299 (377)
T 3my9_A 271 VKIM-----------KCGGLMKAQSLMAIADTAGL-PGYGG 299 (377)
T ss_dssp CCHH-----------HHTSHHHHHHHHHHHHHHTC-CEECC
T ss_pred eccc-----------ccCCHHHHHHHHHHHHHcCC-eEecC
Confidence 5431 12568889999999999999 76443
No 368
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=27.82 E-value=3.1e+02 Score=24.01 Aligned_cols=98 Identities=10% Similarity=0.110 Sum_probs=66.7
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+- ++.. ++.+++..++. |.+..++. ...++.+.+.+ ++.|+
T Consensus 220 N~~w~~~~A~~~~~~l~~~~i~~iE----qP~~--d~~~-~~~l~~~~~iP---Ia~dE~~~~~~~~~~~i~~~a~d~v~ 289 (398)
T 4dye_A 220 NAAWSVPDSVRAGIALEELDLEYLE----DPCV--GIEG-MAQVKAKVRIP---LCTNMCVVRFEDFAPAMRLNAVDVIH 289 (398)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEE----CCSS--HHHH-HHHHHHHCCSC---EEESSSCCSGGGHHHHHHTTCCSEEE
T ss_pred CCCCCHHHHHHHHHHHhhcCCCEEc----CCCC--CHHH-HHHHHhhCCCC---EEeCCcCCCHHHHHHHHHhCCCCEEE
Confidence 4567889999999999888877775 8987 5433 33444433553 55666555 34566666654 77777
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNC 131 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~ 131 (298)
+.+.- .+++..+++....+.++|+ ++.+.+
T Consensus 290 ~k~~~-----------~GGit~~~~ia~~A~~~gi-~~~~h~ 319 (398)
T 4dye_A 290 GDVYK-----------WGGIAATKALAAHCETFGL-GMNLHS 319 (398)
T ss_dssp ECHHH-----------HTSHHHHHHHHHHHHHHTC-EEEECC
T ss_pred eCccc-----------cCCHHHHHHHHHHHHHcCC-eEEEcC
Confidence 65421 3568899999999999999 665543
No 369
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=27.81 E-value=2e+02 Score=22.17 Aligned_cols=52 Identities=21% Similarity=0.324 Sum_probs=37.1
Q ss_pred hcCCCc-HHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCee
Q 022377 103 LTRRKG-HEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 103 ir~~~~-~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~~ 156 (298)
+.|..+ +..+.++.+.|.+.|+ +..+.++-- ..+.+++.++++-+.+.|+++
T Consensus 18 imGS~SD~~v~~~a~~~l~~~gi-~~ev~V~sa-HR~p~~l~~~~~~a~~~g~~V 70 (173)
T 4grd_A 18 LMGSSSDWDVMKHAVAILQEFGV-PYEAKVVSA-HRMPDEMFDYAEKARERGLRA 70 (173)
T ss_dssp EESSGGGHHHHHHHHHHHHHTTC-CEEEEECCT-TTSHHHHHHHHHHHTTTTCSE
T ss_pred EeCcHhHHHHHHHHHHHHHHcCC-CEEEEEEcc-ccCHHHHHHHHHHHHhcCCeE
Confidence 344443 8888888888999999 776665322 246778888888887778764
No 370
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=27.79 E-value=68 Score=24.45 Aligned_cols=42 Identities=26% Similarity=0.324 Sum_probs=29.4
Q ss_pred cCccccHHHHHHHHhccCCCCcEEEEeCccch-Hhh-HHHHHHcCC
Q 022377 42 PTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARK-LPKLKESGL 85 (298)
Q Consensus 42 Pll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~-~~~l~~~~~ 85 (298)
..+.|+..++++.+++. |+. +.+.||+... .+. ...+...|+
T Consensus 33 ~~~~~g~~~~L~~L~~~-g~~-~~i~Tn~~~~~~~~~~~~l~~~gl 76 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQL-GFK-QAILSNTATSDTEVIKRVLTNFGI 76 (189)
T ss_dssp CCBCTTHHHHHHHHHHT-TCE-EEEEECCSSCCHHHHHHHHHHTTC
T ss_pred ceeCcCHHHHHHHHHHC-CCE-EEEEECCCccchHHHHHHHHhcCc
Confidence 34667899999999994 995 9999999653 232 334444554
No 371
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=27.66 E-value=2e+02 Score=23.24 Aligned_cols=77 Identities=21% Similarity=0.219 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCc-cC--cc--------ccHHHHHHHHhccCCCCcEEEEeCcc-ch--HhhH-HHHH
Q 022377 17 LNEILRLAYLFVTSGVDKIRLTGGE-PT--VR--------KDIEEACFHLSKLKGLKTLAMTTNGL-TL--ARKL-PKLK 81 (298)
Q Consensus 17 ~e~~~~~i~~~~~~~~~~v~~tGGE-Pl--l~--------~~~~~ii~~~~~~~~~~~v~i~TNG~-ll--~~~~-~~l~ 81 (298)
.+.+.+.++.+..+|+..|.+..|- |- .. ..+.++++++++ .|+. +.+.+... ++ .+.+ +.+.
T Consensus 83 ~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~-l~lE~~~~~~~~~~~~~~~l~~ 160 (286)
T 3dx5_A 83 IEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQ-HNMY-VLLETHPNTLTDTLPSTLELLG 160 (286)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHH-TTCE-EEEECCTTSTTSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHH-hCCE-EEEecCCCcCcCCHHHHHHHHH
Confidence 4667788888888999988776443 21 11 113356666666 4885 88887633 22 2333 3333
Q ss_pred HcCCCeEEEecCCC
Q 022377 82 ESGLTSVNISLDTL 95 (298)
Q Consensus 82 ~~~~~~v~iSldg~ 95 (298)
..+-..+.+-+|..
T Consensus 161 ~~~~~~vg~~~D~~ 174 (286)
T 3dx5_A 161 EVDHPNLKINLDFL 174 (286)
T ss_dssp HHCCTTEEEEEEHH
T ss_pred hcCCCCeEEEeccc
Confidence 44556688888874
No 372
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=27.66 E-value=2.2e+02 Score=24.72 Aligned_cols=71 Identities=14% Similarity=0.109 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHhCCCCEEEEc--CCccCccccHHHHHHHHhccC-CCCcEEEEeCccchHhhHHHHHHcCCCeEEEecCC
Q 022377 18 NEILRLAYLFVTSGVDKIRLT--GGEPTVRKDIEEACFHLSKLK-GLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDT 94 (298)
Q Consensus 18 e~~~~~i~~~~~~~~~~v~~t--GGEPll~~~~~~ii~~~~~~~-~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSldg 94 (298)
+.....++.+.+.|+..|.+. .|.+ ..+.++++.+++.. ++. +.. -| ....+..+.+.++|.|.|.+|+.+
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~~---~~~~e~I~~ir~~~~~~~-Vi~-G~-V~T~e~A~~a~~aGaD~I~Vg~g~ 172 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAHA---KYVGKTLKSLRQLLGSRC-IMA-GN-VATYAGADYLASCGADIIKAGIGG 172 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCSS---HHHHHHHHHHHHHHTTCE-EEE-EE-ECSHHHHHHHHHTTCSEEEECCSS
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCc---HhHHHHHHHHHHhcCCCe-EEE-cC-cCCHHHHHHHHHcCCCEEEEcCCC
Confidence 344556777777888877773 4532 24567888888742 443 433 12 223567888999999999998765
No 373
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=27.35 E-value=2.6e+02 Score=23.07 Aligned_cols=101 Identities=13% Similarity=0.058 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCCEEEEcCCcc----Cccc--------cHHHHHHHHhccCCCCcEEEEeCcc---------------c
Q 022377 20 ILRLAYLFVTSGVDKIRLTGGEP----TVRK--------DIEEACFHLSKLKGLKTLAMTTNGL---------------T 72 (298)
Q Consensus 20 ~~~~i~~~~~~~~~~v~~tGGEP----ll~~--------~~~~ii~~~~~~~~~~~v~i~TNG~---------------l 72 (298)
+...++.+.+.|...|-+.+..| .... +..++-+.+.+. |+. +....-+. .
T Consensus 38 l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~-GL~-i~~~~~~~~~~~~~~~~~~~~~~~ 115 (305)
T 3obe_A 38 MPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDA-GLR-ISSSHLTPSLREYTKENMPKFDEF 115 (305)
T ss_dssp HHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHT-TCE-EEEEBCCCSCCCCCGGGHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHC-CCe-EEEeeccccccccchhhHHHHHHH
Q ss_pred hHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHH----cCCCCEEEE
Q 022377 73 LARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIE----VGYNPVKVN 130 (298)
Q Consensus 73 l~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~----~g~~~v~i~ 130 (298)
+.+.++.....|...|.+. +..+. .....++.+.++++.+.+ +|+ .+.+.
T Consensus 116 ~~~~i~~A~~lG~~~v~~~--~~~~~-----~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE 169 (305)
T 3obe_A 116 WKKATDIHAELGVSCMVQP--SLPRI-----ENEDDAKVVSEIFNRAGEITKKAGI-LWGYH 169 (305)
T ss_dssp HHHHHHHHHHHTCSEEEEC--CCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTC-EEEEE
T ss_pred HHHHHHHHHHcCCCEEEeC--CCCCC-----CCHHHHHHHHHHHHHHHHHHHHcCC-EEEEe
No 374
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=27.20 E-value=3e+02 Score=23.72 Aligned_cols=98 Identities=11% Similarity=0.064 Sum_probs=66.1
Q ss_pred CCCCC-HHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchH-hhHHHHHHc-CCCeE
Q 022377 12 PQLLS-LNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKES-GLTSV 88 (298)
Q Consensus 12 ~~~l~-~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~-~~~~~l~~~-~~~~v 88 (298)
+.-.+ .++..++++.+.++++..+- ||+-..++. -++.+++..+ +-|.++..+.+ ..++.+.+. .++.|
T Consensus 201 n~~~~d~~~A~~~~~~l~~~~i~~iE----qP~~~~~~~-~~~~l~~~~~---iPIa~dE~~~~~~~~~~~l~~~~~d~v 272 (374)
T 3sjn_A 201 ASKWHTCGHSAMMAKRLEEFNLNWIE----EPVLADSLI-SYEKLSRQVS---QKIAGGESLTTRYEFQEFITKSNADIV 272 (374)
T ss_dssp TTTTCSHHHHHHHHHHSGGGCCSEEE----CSSCTTCHH-HHHHHHHHCS---SEEEECTTCCHHHHHHHHHHHHCCSEE
T ss_pred CCCCCCHHHHHHHHHHhhhcCceEEE----CCCCcccHH-HHHHHHhhCC---CCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 34567 89998999999888877775 787654543 3444555334 45677877663 456666554 46766
Q ss_pred EEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 89 NISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
++.+. ..+++..+++....+.++|+ ++.+
T Consensus 273 ~~k~~-----------~~GGit~~~~ia~~A~~~gi-~~~~ 301 (374)
T 3sjn_A 273 QPDIT-----------RCGGITEMKKIYDIAQMNGT-QLIP 301 (374)
T ss_dssp CCBTT-----------TSSHHHHHHHHHHHHHHHTC-EECC
T ss_pred EeCcc-----------ccCCHHHHHHHHHHHHHcCC-EEEe
Confidence 65542 23568899999999999999 5533
No 375
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=27.15 E-value=2.3e+02 Score=22.37 Aligned_cols=43 Identities=19% Similarity=0.132 Sum_probs=27.1
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEE
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLA 65 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~ 65 (298)
.+.++. ++.+.+.|...|.+.+ |. ..+..++-+.+.+ .|+. +.
T Consensus 15 ~~~~~~---l~~~~~~G~~~vEl~~--~~-~~~~~~~~~~l~~-~gl~-~~ 57 (260)
T 1k77_A 15 VPFIER---FAAARKAGFDAVEFLF--PY-NYSTLQIQKQLEQ-NHLT-LA 57 (260)
T ss_dssp SCGGGH---HHHHHHHTCSEEECSC--CT-TSCHHHHHHHHHH-TTCE-EE
T ss_pred CCHHHH---HHHHHHhCCCEEEecC--CC-CCCHHHHHHHHHH-cCCc-eE
Confidence 555554 4555667888998876 32 2245577677777 4885 54
No 376
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=27.05 E-value=1.3e+02 Score=26.30 Aligned_cols=97 Identities=9% Similarity=0.004 Sum_probs=54.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++..++++.+.++++..+- ||+-..++ +-.+.+++..+ +-|.+...+. .+.++++.+.+ ++.|++
T Consensus 218 ~~~~~~~ai~~~~~l~~~~i~~iE----~P~~~~d~-~~~~~l~~~~~---iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 289 (403)
T 2ox4_A 218 GHTDLVSAIQFAKAIEEFNIFFYE----EINTPLNP-RLLKEAKKKID---IPLASGERIYSRWGFLPFLEDRSIDVIQP 289 (403)
T ss_dssp TCSCHHHHHHHHHHHGGGCEEEEE----CCSCTTST-HHHHHHHHTCC---SCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred CCCCHHHHHHHHHHHHhhCCCEEe----CCCChhhH-HHHHHHHHhCC---CCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 345667777777776666544432 56543232 33333443223 3355666554 34566666544 454443
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
.+. ..+++..+++.++.+.++|+ ++.+
T Consensus 290 k~~-----------~~GGite~~~i~~~A~~~g~-~~~~ 316 (403)
T 2ox4_A 290 DLG-----------TCGGFTEFKKIADMAHIFEV-TVQA 316 (403)
T ss_dssp CHH-----------HHTHHHHHHHHHHHHHHTTC-EECC
T ss_pred Ccc-----------ccCCHHHHHHHHHHHHHcCC-EEee
Confidence 321 12568889999999999999 5533
No 377
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=27.03 E-value=73 Score=23.30 Aligned_cols=70 Identities=14% Similarity=0.155 Sum_probs=36.7
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccc-h-Hhh----HHHHHHcCCCe
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLT-L-ARK----LPKLKESGLTS 87 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~l-l-~~~----~~~l~~~~~~~ 87 (298)
..+.|++.+.+. +.+..-|.+|.=-..-...+.++++.+++. +...+.+.--|.. . ++. .+.+.+.|++.
T Consensus 40 ~~p~e~~v~~a~---~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~-g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~ 115 (137)
T 1ccw_A 40 LSPQELFIKAAI---ETKADAILVSSLYGQGEIDCKGLRQKCDEA-GLEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDR 115 (137)
T ss_dssp EECHHHHHHHHH---HHTCSEEEEEECSSTHHHHHTTHHHHHHHT-TCTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSE
T ss_pred CCCHHHHHHHHH---hcCCCEEEEEecCcCcHHHHHHHHHHHHhc-CCCCCEEEEECCCcCchHhhhhhHHHHHHCCCCE
Confidence 467777655554 445667777642222223344666666663 4322444444543 2 222 45588888873
No 378
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=26.95 E-value=65 Score=28.27 Aligned_cols=25 Identities=4% Similarity=-0.154 Sum_probs=13.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCC
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLTGG 40 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~tGG 40 (298)
+.+++..+++.+.+.|+..|.+++|
T Consensus 254 ~~~~~~~la~~le~~Gvd~i~v~~~ 278 (376)
T 1icp_A 254 PTALGLYMVESLNKYDLAYCHVVEP 278 (376)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 4445555555555555555555543
No 379
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=26.62 E-value=3.7e+02 Score=24.49 Aligned_cols=102 Identities=17% Similarity=0.173 Sum_probs=58.8
Q ss_pred HHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccC-CCCcEEEEeCccchHhhHHHHHHcCCCeEEEecCCCCHHh
Q 022377 21 LRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK-GLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAK 99 (298)
Q Consensus 21 ~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~-~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSldg~~~~~ 99 (298)
.+.++.+.+.|+..|.+....|-. ..+.++++.+++.. ++. +.+ -| ....+..+.+.++|.+.|.+++.+..--.
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~~-~~v~~~i~~i~~~~~~~~-vi~-g~-v~t~e~a~~~~~aGad~i~vg~g~gsi~~ 333 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGHS-QGVIDKVKEVRAKYPSLN-IIA-GN-VATAEATKALIEAGANVVKVGIGPGSICT 333 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTS-HHHHHHHHHHHHHCTTSE-EEE-EE-ECSHHHHHHHHHHTCSEEEECSSCSTTCC
T ss_pred HHHHHHHHhhccceEEecccccch-hhhhhHHHHHHHhCCCce-EEe-ee-eccHHHHHHHHHhCCCEEEECCCCccccc
Confidence 334556667788888887554421 23668888887753 332 332 22 22356788899999999998654422111
Q ss_pred hhhhcC--CCcHHHHHHHHHHHHHcCCCCE
Q 022377 100 FEFLTR--RKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 100 ~~~ir~--~~~~~~v~~~i~~l~~~g~~~v 127 (298)
-....+ .+.+..+.+..+.+.+.++ ++
T Consensus 334 ~~~~~g~g~p~~~~l~~v~~~~~~~~i-PV 362 (511)
T 3usb_A 334 TRVVAGVGVPQLTAVYDCATEARKHGI-PV 362 (511)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHHTTTC-CE
T ss_pred cccccCCCCCcHHHHHHHHHHHHhCCC-cE
Confidence 111222 2336655565566666677 65
No 380
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=26.59 E-value=69 Score=25.81 Aligned_cols=113 Identities=15% Similarity=0.114 Sum_probs=59.4
Q ss_pred HHHHHHhCCCCEEEEcCCc-cCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEE-EecCCCCHHhh
Q 022377 23 LAYLFVTSGVDKIRLTGGE-PTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVN-ISLDTLVPAKF 100 (298)
Q Consensus 23 ~i~~~~~~~~~~v~~tGGE-Pll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~-iSldg~~~~~~ 100 (298)
.++.+.+.|...|++.... |. ....+.++.+++. |+. +.+..|.....+.++.+.+ +.++|. .|+......
T Consensus 77 ~i~~~~~aGadgv~vh~e~~~~--~~~~~~~~~i~~~-g~~-~gv~~~p~t~~e~~~~~~~-~~D~v~~msv~pg~gg-- 149 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHVEHNAS--PHLHRTLCQIREL-GKK-AGAVLNPSTPLDFLEYVLP-VCDLILIMSVNPGFGG-- 149 (230)
T ss_dssp THHHHHHHTCSEEEEECSTTTC--TTHHHHHHHHHHT-TCE-EEEEECTTCCGGGGTTTGG-GCSEEEEESSCC------
T ss_pred HHHHHHHcCCCEEEECcccccc--hhHHHHHHHHHHc-CCc-EEEEEeCCCcHHHHHHHHh-cCCEEEEEEeccccCC--
Confidence 4566667787788777431 43 3456888888884 885 8888876544455555544 577654 355442111
Q ss_pred hhhcCCCcHHHHHHHHHHHH-HcCCCCEEEEEEEecCCCHhHHHHHHH
Q 022377 101 EFLTRRKGHEKVMESINAAI-EVGYNPVKVNCVVMRGFNDDEICDFVE 147 (298)
Q Consensus 101 ~~ir~~~~~~~v~~~i~~l~-~~g~~~v~i~~vi~~~~n~~~i~~i~~ 147 (298)
... .....+++- .++.+. +.+. .+ -+.+.-|.|.+.+.++.+
T Consensus 150 q~~-~~~~~~~i~-~lr~~~~~~~~-~~--~I~v~GGI~~~~~~~~~~ 192 (230)
T 1tqj_A 150 QSF-IPEVLPKIR-ALRQMCDERGL-DP--WIEVDGGLKPNNTWQVLE 192 (230)
T ss_dssp CCC-CGGGHHHHH-HHHHHHHHHTC-CC--EEEEESSCCTTTTHHHHH
T ss_pred ccC-cHHHHHHHH-HHHHHHHhcCC-CC--cEEEECCcCHHHHHHHHH
Confidence 111 111244333 233332 3343 22 234444677766666654
No 381
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=26.50 E-value=1.2e+02 Score=27.87 Aligned_cols=61 Identities=15% Similarity=0.159 Sum_probs=43.7
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEc--C----------------------CccCccccHHHHHHHHhccCCCCcEE-
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLT--G----------------------GEPTVRKDIEEACFHLSKLKGLKTLA- 65 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~t--G----------------------GEPll~~~~~~ii~~~~~~~~~~~v~- 65 (298)
.++.++.+.++++|+.+..++...+.++ - |+..-..++.+|++|++++ ++. |.
T Consensus 161 aR~f~~~~~ik~~id~ma~~KlN~lh~HltDdq~wr~e~~~~P~Lt~~Ga~~~~~~YT~~di~eiv~yA~~r-gI~-VIP 238 (507)
T 1now_A 161 SRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGSYSLSHVYTPNDVRMVIEYARLR-GIR-VLP 238 (507)
T ss_dssp SSSCCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCBCCSSCHHHHHHHSSSTTSCBCHHHHHHHHHHHHHT-TCE-EEE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCcEEEEeeccCccceeeccchhhhhcccCcCCCCCCCHHHHHHHHHHHHHc-CCE-EEE
Confidence 3567999999999999999887776653 1 2233345688999999994 874 54
Q ss_pred -EEeCccch
Q 022377 66 -MTTNGLTL 73 (298)
Q Consensus 66 -i~TNG~ll 73 (298)
|.+=|...
T Consensus 239 EID~PGH~~ 247 (507)
T 1now_A 239 EFDTPGHTL 247 (507)
T ss_dssp EEEESSSCT
T ss_pred ccCCchhHH
Confidence 56666543
No 382
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=26.48 E-value=1.2e+02 Score=27.81 Aligned_cols=51 Identities=14% Similarity=0.161 Sum_probs=37.6
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCEEEEc--C-----------------------CccCccccHHHHHHHHhccCCCC
Q 022377 11 KPQLLSLNEILRLAYLFVTSGVDKIRLT--G-----------------------GEPTVRKDIEEACFHLSKLKGLK 62 (298)
Q Consensus 11 ~~~~l~~e~~~~~i~~~~~~~~~~v~~t--G-----------------------GEPll~~~~~~ii~~~~~~~~~~ 62 (298)
.++.++.+.++++|+.+..++...+.++ - |+..-..++.+|++|++++ ++.
T Consensus 155 aR~f~~~~~ik~~id~mA~~KlN~lh~HltDdq~wr~ei~~~P~Lt~~Ga~~~~~~~YT~~di~eiv~yA~~r-gI~ 230 (507)
T 2gjx_A 155 SRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMRKGSYNPVTHIYTAQDVKEVIEYARLR-GIR 230 (507)
T ss_dssp TTSCCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCBCCSSCTHHHHHHSSCTTTSCBCHHHHHHHHHHHHHT-TCE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCceEEEEEecccCeeeeccccchhhhccccCCCCCCcCHHHHHHHHHHHHHc-CCE
Confidence 3577899999999999999887776653 2 2223344588999999884 764
No 383
>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1
Probab=26.35 E-value=41 Score=28.31 Aligned_cols=42 Identities=12% Similarity=0.106 Sum_probs=32.0
Q ss_pred CCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchH
Q 022377 31 GVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA 74 (298)
Q Consensus 31 ~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~ 74 (298)
|-..+.+++|.|+++.-..++++.+.+. ++. +.+.-+-+.+.
T Consensus 83 g~~Vv~L~~GDP~v~g~~~~l~~~l~~~-gi~-veviPGiSs~~ 124 (294)
T 1wde_A 83 DAVVAVVTAGDPMVATTHSSLAAEALEA-GVA-VRYIPGVSGVQ 124 (294)
T ss_dssp CCEEEEEESBCTTSSSSHHHHHHHHHHT-TCE-EEEECCCCHHH
T ss_pred CCCEEEEeCCCCccccCHHHHHHHHHHC-CCC-EEEECCHhHHH
Confidence 5445667899999998888889998884 885 88876665543
No 384
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=26.29 E-value=75 Score=24.78 Aligned_cols=28 Identities=25% Similarity=0.312 Sum_probs=23.4
Q ss_pred CccccHHHHHHHHhccCCCCcEEEEeCccc
Q 022377 43 TVRKDIEEACFHLSKLKGLKTLAMTTNGLT 72 (298)
Q Consensus 43 ll~~~~~~ii~~~~~~~~~~~v~i~TNG~l 72 (298)
-+.|+..++++.+++. |+. +.+.||+..
T Consensus 50 ~~~pg~~e~L~~L~~~-G~~-~~ivTn~~~ 77 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKM-GFA-LVVVTNQSG 77 (211)
T ss_dssp CBCTTHHHHHHHHHHT-TCE-EEEEEECTH
T ss_pred cCCcCHHHHHHHHHHC-CCe-EEEEECcCC
Confidence 4567899999999984 995 999999974
No 385
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=26.26 E-value=1.3e+02 Score=25.40 Aligned_cols=125 Identities=17% Similarity=0.193 Sum_probs=71.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcC-----CccCcccc-----HHHHHHHHhccCCCCcEEEEeCccchHhhH
Q 022377 8 LTPKPQLLSLNEILRLAYLFVTSGVDKIRLTG-----GEPTVRKD-----IEEACFHLSKLKGLKTLAMTTNGLTLARKL 77 (298)
Q Consensus 8 ~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tG-----GEPll~~~-----~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~ 77 (298)
|-..+..++.+.+.+...++.+.|..-|.+.| |-+-+..+ +..+++.+++. ++. ++|.|-= .+.+
T Consensus 36 Fsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~-~vp-iSIDT~~---~~Va 110 (294)
T 2y5s_A 36 FSDGGRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL-NVP-LSIDTYK---PAVM 110 (294)
T ss_dssp --------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG-CSC-EEEECCC---HHHH
T ss_pred CCCCCCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC-CCe-EEEECCC---HHHH
Confidence 44455567888888888888889988777765 32223322 55666666654 775 8887643 3445
Q ss_pred HHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEE-ecCCC---------------HhH
Q 022377 78 PKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV-MRGFN---------------DDE 141 (298)
Q Consensus 78 ~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi-~~~~n---------------~~~ 141 (298)
+.-.++|.+ +.=|+.+.+ + + +.++.+.++|. ++.+...- +| .+ .+.
T Consensus 111 ~aAl~aGa~-iINdVsg~~-d-----------~---~m~~~~a~~~~-~vVlmh~~G~p-~tm~~~~~~y~dv~~ev~~~ 172 (294)
T 2y5s_A 111 RAALAAGAD-LINDIWGFR-Q-----------P---GAIDAVRDGNS-GLCAMHMLGEP-QTMQVGEPDYGDVVTDVRDF 172 (294)
T ss_dssp HHHHHHTCS-EEEETTTTC-S-----------T---THHHHHSSSSC-EEEEECCCEET-TTTEECCCCCSSHHHHHHHH
T ss_pred HHHHHcCCC-EEEECCCCC-c-----------h---HHHHHHHHhCC-CEEEECCCCCC-ccccccCCccccHHHHHHHH
Confidence 555556887 556766632 1 1 22445567777 65544321 12 11 334
Q ss_pred HHHHHHHHhhCCCe
Q 022377 142 ICDFVELTRDRPIN 155 (298)
Q Consensus 142 i~~i~~~~~~~g~~ 155 (298)
+.+.++.+.+.|+.
T Consensus 173 l~~~i~~a~~~Gi~ 186 (294)
T 2y5s_A 173 LAARAQALRDAGVA 186 (294)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCC
Confidence 66777778888885
No 386
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=26.17 E-value=1.9e+02 Score=25.17 Aligned_cols=95 Identities=13% Similarity=0.118 Sum_probs=60.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++. ++++.+.++++..|- ||+-..++..+-+ +++..+ +-|.+.-++. ...++.+.+.+ ++.|++
T Consensus 211 ~~~~~~~a-~~~~~l~~~~i~~iE----qP~~~~d~~~~~~-l~~~~~---ipIa~dE~~~~~~~~~~~i~~~a~d~v~i 281 (393)
T 1wuf_A 211 SAYNREDF-LLLKELDQYDLEMIE----QPFGTKDFVDHAW-LQKQLK---TRICLDENIRSVKDVEQAHSIGSCRAINL 281 (393)
T ss_dssp TCCCGGGH-HHHHTTGGGTCSEEE----CCSCSSCSHHHHH-HHTTCS---SEEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCCCHHHH-HHHHHHHhCCCeEEE----CCCCCcCHHHHHH-HHHhCC---CCEEECCCcCCHHHHHHHHHhCCCCEEEe
Confidence 34566777 777877777777766 8886555544433 443223 4455555544 34566665554 677777
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVK 128 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~ 128 (298)
.+.- .+++..+++.++.+.++|+ ++.
T Consensus 282 k~~~-----------~GGit~~~~ia~~A~~~gi-~~~ 307 (393)
T 1wuf_A 282 KLAR-----------VGGMSSALKIAEYCALNEI-LVW 307 (393)
T ss_dssp CTGG-----------GTSHHHHHHHHHHHHHTTC-EEE
T ss_pred Chhh-----------hCCHHHHHHHHHHHHHcCC-eEE
Confidence 5421 3568899999999999999 653
No 387
>3pzx_A Formate--tetrahydrofolate ligase; HET: TOE; 2.20A {Moorella thermoacetica} SCOP: c.37.1.10 PDB: 1fp7_A 1fpm_A* 3qb6_A* 3qus_A* 3rbo_A* 3sin_A* 1eg7_A
Probab=26.13 E-value=72 Score=29.36 Aligned_cols=48 Identities=15% Similarity=0.144 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCeeE
Q 022377 109 HEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIR 157 (298)
Q Consensus 109 ~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~~~ 157 (298)
+....+-|+.++++|+ ++.+-+--.+.-+..|++.+.+++.+.|+.+.
T Consensus 360 ~~NL~kHien~~~fGv-pvVVaiN~F~tDT~aEi~~v~~~~~~~G~~~~ 407 (557)
T 3pzx_A 360 FANLEKHIENIGKFGV-PAVVAINAFPTDTEAELNLLYELCAKAGAEVA 407 (557)
T ss_dssp HHHHHHHHHHHHTTTC-CEEEEEECCTTCCHHHHHHHHHHCCSSEEEEE
T ss_pred HHHHHHHHHHHHHcCC-CeEEEEeCCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 4445556666777899 87766655554578899999999999887543
No 388
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=26.09 E-value=72 Score=24.12 Aligned_cols=28 Identities=29% Similarity=0.290 Sum_probs=23.1
Q ss_pred cCccccHHHHHHHHhccCCCCcEEEEeCcc
Q 022377 42 PTVRKDIEEACFHLSKLKGLKTLAMTTNGL 71 (298)
Q Consensus 42 Pll~~~~~~ii~~~~~~~~~~~v~i~TNG~ 71 (298)
.-+.|+..++++.+++. |+. +.|.||+.
T Consensus 41 ~~~~pg~~e~L~~L~~~-G~~-l~i~Tn~~ 68 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKA-GYK-LVMITNQD 68 (176)
T ss_dssp CCBCTTHHHHHHHHHHT-TEE-EEEEEECT
T ss_pred CcCCccHHHHHHHHHHC-CCE-EEEEECCc
Confidence 44568899999999984 885 99999983
No 389
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=26.09 E-value=3e+02 Score=23.53 Aligned_cols=136 Identities=12% Similarity=0.049 Sum_probs=78.9
Q ss_pred CHHHHHHHHHHHHh-CCCCEEEEcCCccCccccHHHHHHHHhcc--CCCCcEEEEeCccch-Hh---hHHHHHHcCCCeE
Q 022377 16 SLNEILRLAYLFVT-SGVDKIRLTGGEPTVRKDIEEACFHLSKL--KGLKTLAMTTNGLTL-AR---KLPKLKESGLTSV 88 (298)
Q Consensus 16 ~~e~~~~~i~~~~~-~~~~~v~~tGGEPll~~~~~~ii~~~~~~--~~~~~v~i~TNG~ll-~~---~~~~l~~~~~~~v 88 (298)
+.+++.+.+.++.+ .|...+.+-.|.+-+. ...+.++.+++. .++. +.+.-|+... ++ .++.|.+.++.++
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~~-~~~e~v~avr~a~g~~~~-l~vDan~~~~~~~a~~~~~~l~~~~i~~i 219 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGARTPA-QDLEHIRSIVKAVGDRAS-VRVDVNQGWDEQTASIWIPRLEEAGVELV 219 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSSSCHH-HHHHHHHHHHHHHGGGCE-EEEECTTCCCHHHHHHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCCCChH-HHHHHHHHHHHhcCCCCE-EEEECCCCCCHHHHHHHHHHHHhcCcceE
Confidence 57777777777777 8989898876654222 234666666663 2464 8899998654 33 4566777788877
Q ss_pred EEecCCCCHHhhhhhcC--------CCcHHHHHHHHHHHHHcCCCCEEEEEEEec-CCCHhHHHHHHHHHhhCCCee
Q 022377 89 NISLDTLVPAKFEFLTR--------RKGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVELTRDRPINI 156 (298)
Q Consensus 89 ~iSldg~~~~~~~~ir~--------~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~-~~n~~~i~~i~~~~~~~g~~~ 156 (298)
.=-+...+-+.+..++. ..+. ...+.++.+.+.+...+ ++.-+.+ | ...+..++++++...|+.+
T Consensus 220 EqP~~~~~~~~~~~l~~~~~ipIa~dE~~-~~~~~~~~~i~~~~~d~-v~ik~~~~G-Git~~~~i~~~A~~~g~~~ 293 (370)
T 1nu5_A 220 EQPVPRANFGALRRLTEQNGVAILADESL-SSLSSAFELARDHAVDA-FSLKLCNMG-GIANTLKVAAVAEAAGISS 293 (370)
T ss_dssp ECCSCTTCHHHHHHHHHHCSSEEEESTTC-CSHHHHHHHHHTTCCSE-EEECHHHHT-SHHHHHHHHHHHHHHTCEE
T ss_pred eCCCCcccHHHHHHHHHhCCCCEEeCCCC-CCHHHHHHHHHhCCCCE-EEEchhhcC-CHHHHHHHHHHHHHcCCcE
Confidence 64443333444444442 1111 11233444444443122 2332222 2 4677788888888888764
No 390
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=26.07 E-value=41 Score=25.81 Aligned_cols=38 Identities=13% Similarity=0.163 Sum_probs=27.8
Q ss_pred CEEEEc-CCccCccccHHHHHHHHhccCCCCcEEEEeCcc
Q 022377 33 DKIRLT-GGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGL 71 (298)
Q Consensus 33 ~~v~~t-GGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ 71 (298)
..|.+. .|..+-..+|.+.++..... |...+.+.--|.
T Consensus 76 ~vI~LD~~Gk~~sS~~fA~~l~~~~~~-g~~~i~FvIGG~ 114 (163)
T 4fak_A 76 TVITLEIQGKMLSSEGLAQELNQRMTQ-GQSDFVFVIGGS 114 (163)
T ss_dssp EEEEEEEEEEECCHHHHHHHHHHHHHT-TCCEEEEEECBT
T ss_pred EEEEEcCCCCcCCHHHHHHHHHHHHhc-CCcceEEEEECC
Confidence 355665 79999999999888887763 644577777664
No 391
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=26.00 E-value=2.3e+02 Score=24.75 Aligned_cols=96 Identities=19% Similarity=0.172 Sum_probs=64.7
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++..+ +.+++..++ -|.++.++. ...++.+.+.+ ++.|+
T Consensus 227 N~~~~~~~A~~~~~~l~~~~i~~iE----qP~~~~d~~~~-~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~a~d~v~ 298 (390)
T 3ugv_A 227 NQGLDMAEAMHRTRQIDDLGLEWIE----EPVVYDNFDGY-AQLRHDLKT---PLMIGENFYGPREMHQALQAGACDLVM 298 (390)
T ss_dssp TTCCCHHHHHHHHHHHTTSCCSEEE----CCSCTTCHHHH-HHHHHHCSS---CEEECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred CCCCCHHHHHHHHHHHHhhCCCEEE----CCCCcccHHHH-HHHHHhcCC---CEEeCCCcCCHHHHHHHHHcCCCCEEE
Confidence 4557888988899998888877775 78765555444 445443354 356677665 34566676654 66555
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
+.+. ..+++..+++.+..+.++|+ ++
T Consensus 299 ik~~-----------~~GGit~~~~i~~~A~~~gi-~~ 324 (390)
T 3ugv_A 299 PDFM-----------RIGGVSGWMRAAGVAGAWGI-PM 324 (390)
T ss_dssp CBHH-----------HHTHHHHHHHHHHHHHHHTC-CB
T ss_pred eCcc-----------ccCCHHHHHHHHHHHHHcCC-EE
Confidence 4431 12568899999999999999 65
No 392
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=25.99 E-value=1.9e+02 Score=25.17 Aligned_cols=79 Identities=11% Similarity=0.099 Sum_probs=51.2
Q ss_pred CCCHHHHHHHHHHHHhC-CCCEEEEc---------CCccCccccHH-HHHHHHhccC------CCCcEEEEeCccch-Hh
Q 022377 14 LLSLNEILRLAYLFVTS-GVDKIRLT---------GGEPTVRKDIE-EACFHLSKLK------GLKTLAMTTNGLTL-AR 75 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~-~~~~v~~t---------GGEPll~~~~~-~ii~~~~~~~------~~~~v~i~TNG~ll-~~ 75 (298)
.-++|+..+++++...- ++..+..+ .|+|-|++++. ++-+++++.. ++. +.+ --|+-+ ++
T Consensus 194 yT~Peea~~Fv~~tg~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~~~~~~~~vp-LVl-HGgSG~p~e 271 (357)
T 3qm3_A 194 YTQPEDVALAYERLGKISDKFSIAASFGNVHGVYKPGNVSLQPEILKNSQKFVKDKFALNSDKPIN-FVF-HGGSGSELK 271 (357)
T ss_dssp SCCHHHHHHHHHHHTTTCSCEEEECCSSCCCSSCCSSCCCCCTHHHHHHHHHHHHHTTCSCSCCSC-EEE-CSCTTCCHH
T ss_pred cCCHHHHHHHHHHhCCCCcccEEEEecCCccCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCc-EEE-eCCCCCCHH
Confidence 46789999988865322 22333332 27899999866 6666665432 343 322 344445 67
Q ss_pred hHHHHHHcCCCeEEEecCC
Q 022377 76 KLPKLKESGLTSVNISLDT 94 (298)
Q Consensus 76 ~~~~l~~~~~~~v~iSldg 94 (298)
.+++....|+..|+|+-|.
T Consensus 272 ~i~~ai~~GV~KiNi~Tdl 290 (357)
T 3qm3_A 272 DIKNAVSYGVIKMNIDTDT 290 (357)
T ss_dssp HHHHHHHTTEEEEEECHHH
T ss_pred HHHHHHHCCceEEEechHH
Confidence 8999999999999997554
No 393
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=25.99 E-value=3.1e+02 Score=23.47 Aligned_cols=74 Identities=12% Similarity=0.094 Sum_probs=41.7
Q ss_pred CCCHHHHHHHHHHHHhC--CCCEEEEcCCccCccc-cHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHH-cCCCeEE
Q 022377 14 LLSLNEILRLAYLFVTS--GVDKIRLTGGEPTVRK-DIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKE-SGLTSVN 89 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~--~~~~v~~tGGEPll~~-~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~-~~~~~v~ 89 (298)
.++.++....++.+.++ ++..+.+.|.|---.+ .+.++.+.+++. |+. +.+--.=+.-.+.+..... .+.++|.
T Consensus 145 ~~~~~~a~~~l~~a~~~~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~-gl~-~~~HagE~~~~~~i~~al~~lg~~rIg 222 (343)
T 3rys_A 145 DMSEDSALEVLDQLLAMHAPIAGIGLDSAEVGNPPSKFERLYQRAAEA-GLR-RIAHAGEEGPASYITEALDVLHVERID 222 (343)
T ss_dssp TSCHHHHHHHHHHHHHTTCCCCEEEEESCCTTCCGGGGHHHHHHHHHT-TCE-EEEEESSSSCHHHHHHHHHTSCCSEEE
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEEecCCcccCCCHHHHHHHHHHHHHC-CCe-EEEeeCCCCCHHHHHHHHhcCCcceee
Confidence 45667777777666654 3556777765522222 366888888874 774 6665532222334433333 5666655
No 394
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=25.97 E-value=2.5e+02 Score=22.44 Aligned_cols=45 Identities=16% Similarity=0.141 Sum_probs=29.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEE
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAM 66 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i 66 (298)
.+++++. ++.+.+.|...|-+.+ |. ..+..++-+.+.+ .|+. +..
T Consensus 22 ~~~~~~~---l~~~~~~G~~~vEl~~--~~-~~~~~~~~~~l~~-~gl~-~~~ 66 (269)
T 3ngf_A 22 EVPFLER---FRLAAEAGFGGVEFLF--PY-DFDADVIARELKQ-HNLT-QVL 66 (269)
T ss_dssp TSCHHHH---HHHHHHTTCSEEECSC--CT-TSCHHHHHHHHHH-TTCE-EEE
T ss_pred cCCHHHH---HHHHHHcCCCEEEecC--Cc-cCCHHHHHHHHHH-cCCc-EEE
Confidence 4666665 5666678999999986 32 2246677777777 4885 553
No 395
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=25.97 E-value=2.4e+02 Score=22.17 Aligned_cols=60 Identities=15% Similarity=0.159 Sum_probs=36.9
Q ss_pred HHHHHHhCCCCEEEEcCC--ccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeE
Q 022377 23 LAYLFVTSGVDKIRLTGG--EPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSV 88 (298)
Q Consensus 23 ~i~~~~~~~~~~v~~tGG--EPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v 88 (298)
.++.+.+.|...|.+.+. ++ +...++++.+++. ++. +.+..+.....+.++.+. .+.+.|
T Consensus 83 ~v~~~~~~Gad~v~vh~~~~~~---~~~~~~~~~~~~~-g~~-ig~~~~p~t~~e~~~~~~-~~~d~v 144 (230)
T 1rpx_A 83 RVPDFIKAGADIVSVHCEQSST---IHLHRTINQIKSL-GAK-AGVVLNPGTPLTAIEYVL-DAVDLV 144 (230)
T ss_dssp HHHHHHHTTCSEEEEECSTTTC---SCHHHHHHHHHHT-TSE-EEEEECTTCCGGGGTTTT-TTCSEE
T ss_pred HHHHHHHcCCCEEEEEecCccc---hhHHHHHHHHHHc-CCc-EEEEeCCCCCHHHHHHHH-hhCCEE
Confidence 455666788888888776 54 4456778888774 774 777766332234444433 356755
No 396
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=25.88 E-value=2e+02 Score=25.03 Aligned_cols=76 Identities=12% Similarity=0.105 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCccC-------------------------------------c---ccc-HHHHHHH
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLTGGEPT-------------------------------------V---RKD-IEEACFH 54 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~tGGEPl-------------------------------------l---~~~-~~~ii~~ 54 (298)
+.+...++++++.+.|...+.++-|-|. + ++. ..+.++.
T Consensus 144 d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~ 223 (368)
T 2nli_A 144 DDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEE 223 (368)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHH
Confidence 3455667777777788777777655332 1 223 2366777
Q ss_pred HhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEecCC
Q 022377 55 LSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDT 94 (298)
Q Consensus 55 ~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSldg 94 (298)
+++..++. +.+- |....+..+.+.++|++.|.||-.|
T Consensus 224 lr~~~~~P-vivK--~v~~~e~a~~a~~~Gad~I~vs~~g 260 (368)
T 2nli_A 224 IAGHSGLP-VFVK--GIQHPEDADMAIKRGASGIWVSNHG 260 (368)
T ss_dssp HHHHSSSC-EEEE--EECSHHHHHHHHHTTCSEEEECCGG
T ss_pred HHHHcCCC-EEEE--cCCCHHHHHHHHHcCCCEEEEcCCC
Confidence 77754554 5443 3344677889999999999998766
No 397
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=25.87 E-value=93 Score=29.44 Aligned_cols=50 Identities=10% Similarity=0.115 Sum_probs=39.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEc---------------CCccCccccHHHHHHHHhccCCCCcE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLT---------------GGEPTVRKDIEEACFHLSKLKGLKTL 64 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~t---------------GGEPll~~~~~~ii~~~~~~~~~~~v 64 (298)
..++.+.++++|+.+..++...+.+. .|++.-..++.+|++|++++ ++. |
T Consensus 97 ~f~~~~~ik~~id~ma~~KlN~lh~Hl~D~~ei~~~P~l~~~~~~YT~~di~eiv~yA~~r-gI~-V 161 (627)
T 2epl_X 97 AVLNLSSAKKMIEVLALMGYSTFELYMEDTYEIENQPYFGYFRGRYTVAELQEIEDYAADF-DMS-F 161 (627)
T ss_dssp CCBCHHHHHHHHHHHHHHTCCEEEEECSSCBCCTTCTTTTTTTTCBCHHHHHHHHHHHHHT-TCE-E
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEEeecccccCCCcccCccCCCcCHHHHHHHHHHHHHc-CCE-E
Confidence 38999999999999999887777653 24455556799999999994 874 5
No 398
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=25.63 E-value=2.9e+02 Score=23.31 Aligned_cols=73 Identities=11% Similarity=0.056 Sum_probs=51.0
Q ss_pred CCCCcEEEEeCccch-HhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEe
Q 022377 59 KGLKTLAMTTNGLTL-ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVM 134 (298)
Q Consensus 59 ~~~~~v~i~TNG~ll-~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~ 134 (298)
.++. ++...|...+ +.....+...+++.+.+- ....-+....-+|.-+|..+=+.++.+.+.|+ .|...+.+.
T Consensus 12 ~g~~-~G~a~~~~~~~~~~~~~~~~~~fn~vt~e-N~~kW~~~ep~~g~~~f~~~D~~v~~a~~~gi-~v~ghtlvW 85 (313)
T 1v0l_A 12 SGRY-FGTAIASGRLSDSTYTSIAGREFNMVTAE-NEMKIDATEPQRGQFNFSSADRVYNWAVQNGK-QVRGHTLAW 85 (313)
T ss_dssp TTCE-EEEEECGGGTTCHHHHHHHHHHCSEEEES-STTSHHHHCSBTTBCCCHHHHHHHHHHHHTTC-EEEEEEEEC
T ss_pred cCCE-EEEEeChhhcCCHHHHHHHHhcCCEEEEC-CcccHHHhCCCCCccCchHHHHHHHHHHHCCC-EEEEEeecC
Confidence 4774 8888887777 456778888889988873 12223333344455568888888999999999 887777654
No 399
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=25.40 E-value=3.4e+02 Score=23.65 Aligned_cols=99 Identities=10% Similarity=0.159 Sum_probs=63.7
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..+- ||+-..++..+ +.+++..++. |.++.... ...++.+.+.+ ++.|+
T Consensus 207 N~~~~~~~A~~~~~~l~~~~i~~iE----eP~~~~d~~~~-~~l~~~~~iP---Ia~dE~~~~~~~~~~~i~~~a~d~v~ 278 (388)
T 3tcs_A 207 NSCYTPDRAIEVGHMLQDHGFCHFE----EPCPYWELAQT-KQVTDALDID---VTGGEQDCDLPTWQRMIDMRAVDIVQ 278 (388)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCCEEE----CCSCTTCHHHH-HHHHHHCSSC---EEECTTCCCHHHHHHHHHHTCCSEEC
T ss_pred CCCcCHHHHHHHHHHHhhcCCeEEE----CCCCccCHHHH-HHHHHhcCCC---EEcCCccCCHHHHHHHHHcCCCCEEE
Confidence 4557888888888988888877664 78765555443 4444433543 55666554 34555555544 66555
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 130 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 130 (298)
+.+- ..+++..+++....+.++|+ ++...
T Consensus 279 ~d~~-----------~~GGit~a~kia~~A~~~gv-~~~~h 307 (388)
T 3tcs_A 279 PDIL-----------YLGGICRTLRVVEMARAAGL-PVTPH 307 (388)
T ss_dssp CCHH-----------HHTSHHHHHHHHHHHHHTTC-CBCCC
T ss_pred eCcc-----------ccCCHHHHHHHHHHHHHcCC-EEEec
Confidence 4431 12568888999999999999 66433
No 400
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=25.35 E-value=42 Score=25.90 Aligned_cols=37 Identities=16% Similarity=0.308 Sum_probs=26.2
Q ss_pred EEEEc-CCccCccccHHHHHHHHhccCCCCcEEEEeCcc
Q 022377 34 KIRLT-GGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGL 71 (298)
Q Consensus 34 ~v~~t-GGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ 71 (298)
.|.+. .|..+-..+|.+.++..... |...+.+.--|.
T Consensus 73 vI~LD~~Gk~~sS~~fA~~l~~~~~~-G~~~i~FvIGGa 110 (167)
T 1to0_A 73 VIALAIEGKMKTSEELADTIDKLATY-GKSKVTFVIGGS 110 (167)
T ss_dssp EEEEEEEEEECCHHHHHHHHHHHHTT-TCCEEEEEECCS
T ss_pred EEEEcCCCCcCCHHHHHHHHHHHHhc-CCceEEEEEECC
Confidence 45565 78999899999888887763 533466666664
No 401
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=25.29 E-value=3.5e+02 Score=23.78 Aligned_cols=97 Identities=9% Similarity=0.033 Sum_probs=61.3
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+...+.++..++++.+.++++..+- ||+-..++..+ +.+++..++. |.+.-.+. ...++++.+.+ ++.|+
T Consensus 229 n~~~~~~~A~~~~~~l~~~~i~~iE----eP~~~~d~~~~-~~l~~~~~ip---Ia~dE~~~~~~~~~~~i~~~a~d~v~ 300 (421)
T 4hnl_A 229 HERLHPNQAIQFAKAAEPYQLFFLE----DILPPDQSHWL-TQLRSQSATP---IATGELFNNPMEWQELVKNRQIDFMR 300 (421)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEE----CCSCGGGGGGH-HHHHTTCCCC---EEECTTCCSGGGTHHHHHTTCCSEEC
T ss_pred cccCCHHHHHHHHHHhhhhhhcccc----cCCcccchHHH-HHHHhcCCCC---eecCcceehhHHHHHHHhcCCceEEE
Confidence 4456888888888888888766663 67765554433 3444433553 44554444 33455665554 56555
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVK 128 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~ 128 (298)
+.+. ..+++..+++....+.++|+ ++.
T Consensus 301 ~d~~-----------~~GGite~~~ia~~A~~~gi-~v~ 327 (421)
T 4hnl_A 301 AHVS-----------QIGGITPALKLAHFCDAMGV-RIA 327 (421)
T ss_dssp CCGG-----------GGTSHHHHHHHHHHHHHTTC-EEC
T ss_pred eCCC-----------CCCCHHHHHHHHHHHHHCCC-eEE
Confidence 5432 23578899999999999999 553
No 402
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=25.18 E-value=3.2e+02 Score=23.24 Aligned_cols=61 Identities=13% Similarity=0.220 Sum_probs=36.2
Q ss_pred HHHhCCCCEEEEc--CCccCcccc---------HHHHHHHHhccC---CCCcEEEEeCccchHhhHHHHHHcCCCeEEE
Q 022377 26 LFVTSGVDKIRLT--GGEPTVRKD---------IEEACFHLSKLK---GLKTLAMTTNGLTLARKLPKLKESGLTSVNI 90 (298)
Q Consensus 26 ~~~~~~~~~v~~t--GGEPll~~~---------~~~ii~~~~~~~---~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~i 90 (298)
...+.|...|.+. .| .++.|+ +.++++.+++.. ++. +...+.|. ...++.+.+.|++.+++
T Consensus 195 ~~~~aGad~i~i~d~~~-~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~-ii~~~~g~--~~~l~~l~~~g~d~i~~ 269 (354)
T 3cyv_A 195 AQIKAGAQAVMIFDTWG-GVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVP-VTLFTKGG--GQWLEAMAETGCDALGL 269 (354)
T ss_dssp HHHHTTCSEEEEECTTG-GGSCHHHHHHHTHHHHHHHHHHSCSEETTEECC-EEEECTTT--TTTHHHHHTTSCSEEEC
T ss_pred HHHHhCCCEEEEeCCcc-ccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCC-EEEECCCH--HHHHHHHHhcCCCEEEe
Confidence 3344677777663 22 267654 335555665431 354 54555554 56788888999997764
No 403
>3p14_A L-rhamnose isomerase; TIM barrel; 2.51A {Bacillus halodurans} SCOP: c.1.15.2 PDB: 3uu0_A 3uva_A 3uxi_A
Probab=25.17 E-value=2.2e+02 Score=25.36 Aligned_cols=97 Identities=12% Similarity=0.048 Sum_probs=67.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHhC--CCCEEEEc------CCccCcc----c-cHHHHHHHHhccCCCCcEEEEeCccchHh
Q 022377 9 TPKPQLLSLNEILRLAYLFVTS--GVDKIRLT------GGEPTVR----K-DIEEACFHLSKLKGLKTLAMTTNGLTLAR 75 (298)
Q Consensus 9 ~~~~~~l~~e~~~~~i~~~~~~--~~~~v~~t------GGEPll~----~-~~~~ii~~~~~~~~~~~v~i~TNG~ll~~ 75 (298)
.-++..-+++|..+=+.++.++ +...|.|. |||+.-+ | ++.++.+.+++. |+. +.+++|.+.-++
T Consensus 68 ~~pG~ar~~~E~~~D~~~~~~l~~~~~~v~LH~~y~~~~~~~v~~d~~~p~~f~~~~~~a~e~-GL~-l~~n~n~Fshp~ 145 (424)
T 3p14_A 68 DYPGKATTPEELRMDLEKALSLIPGKHRVNLHAIYAETDGKVVERDQLEPRHFEKWVRWAKRH-GLG-LDFNPTLFSHEK 145 (424)
T ss_dssp CCSCCCCSHHHHHHHHHHHHTTSSSCCEEEEEGGGCCCTTCCCCGGGCCGGGGHHHHHHHHHH-TCE-EEEECCCSSSGG
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCcceecchhhhccCCCcCCccccChhhHHHHHHHHHHc-CCc-eeeccCCCCChh
Confidence 4466778999999888888885 46788886 7886655 2 588999999985 996 777777643221
Q ss_pred hHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc
Q 022377 76 KLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV 122 (298)
Q Consensus 76 ~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~ 122 (298)
. . -.+|+-.+++++.+ ...+.++++++...+.
T Consensus 146 y-----k-----~G~alTnPD~~VR~-----~AI~h~k~~idia~~~ 177 (424)
T 3p14_A 146 A-----K-----DGLTLAHPDQAIRQ-----FWIDHCIASRKIGEYF 177 (424)
T ss_dssp G-----T-----TSCSTTCSSHHHHH-----HHHHHHHHHHHHHHHH
T ss_pred h-----c-----CCccCCCCCHHHHH-----HHHHHHHHHHHHHHHH
Confidence 0 1 12456667776531 2367888888888883
No 404
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=25.09 E-value=3.4e+02 Score=23.54 Aligned_cols=135 Identities=10% Similarity=0.007 Sum_probs=79.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccCcccc-HHHHHHHHhcc--CCCCcEEEEeCccch-Hh---hHHHHHHcCCCe
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTL-AR---KLPKLKESGLTS 87 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll-~~---~~~~l~~~~~~~ 87 (298)
.+++++.+.+.++.+.|...|.+-+|-. .++ ..++++.+++. .++. +.+.-|+... ++ .++.|.+.++++
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~--~~~~~~e~v~avR~a~G~d~~-l~vDan~~~~~~~a~~~~~~l~~~~i~~ 224 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPMLD--SLSISIQFVEKVREIVGDELP-LMLDLAVPEDLDQTKSFLKEVSSFNPYW 224 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCCCS--SHHHHHHHHHHHHHHHCSSSC-EEEECCCCSCHHHHHHHHHHHGGGCCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCC--hHHHHHHHHHHHHHHhCCCCE-EEEEcCCCCCHHHHHHHHHHHHhcCCCe
Confidence 5788888888888888999899876521 023 34777777763 3574 8899997654 33 456666778888
Q ss_pred EEEecCCCCHHhhhhhcC--------CCcHHHHHHHHHHHHHcCCCCEEEEEEEec-CCCHhHHHHHHHHHhhCCCe
Q 022377 88 VNISLDTLVPAKFEFLTR--------RKGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVELTRDRPIN 155 (298)
Q Consensus 88 v~iSldg~~~~~~~~ir~--------~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~-~~n~~~i~~i~~~~~~~g~~ 155 (298)
+.=.+...+-+.+..++. ..++.. .+.++.+.+.+...+ ++.-+.+ | ...+..++++++...|+.
T Consensus 225 iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~-~~~~~~~i~~~~~d~-v~ik~~~~G-Git~~~~i~~~A~~~gi~ 298 (391)
T 2qgy_A 225 IEEPVDGENISLLTEIKNTFNMKVVTGEKQSG-LVHFRELISRNAADI-FNPDISGMG-GLIDIIEISNEASNNGIF 298 (391)
T ss_dssp EECSSCTTCHHHHHHHHHHCSSCEEECTTCCS-HHHHHHHHHTTCCSE-ECCBTTTSS-CHHHHHHHHHHHHHTTCE
T ss_pred EeCCCChhhHHHHHHHHhhCCCCEEEcCCcCC-HHHHHHHHHcCCCCE-EEECcchhC-CHHHHHHHHHHHHHCCCE
Confidence 765554334444444442 111111 234444555443121 2222222 1 466777888888888775
No 405
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=24.85 E-value=3.5e+02 Score=23.58 Aligned_cols=153 Identities=16% Similarity=0.160 Sum_probs=92.9
Q ss_pred HHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-H-------------------hhHHHHHHcCCC
Q 022377 27 FVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-A-------------------RKLPKLKESGLT 86 (298)
Q Consensus 27 ~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~-------------------~~~~~l~~~~~~ 86 (298)
..+.|+..+.+--|.==-...+.++++.++++ ++. +.|-.|+=.| . +.++.+.+.+++
T Consensus 101 a~e~G~dklRINPGNig~~~~~~~vv~~ak~~-~~p-iRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~ 178 (366)
T 3noy_A 101 SMEKGVHGIRINPGNIGKEEIVREIVEEAKRR-GVA-VRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFT 178 (366)
T ss_dssp HHHTTCSEEEECHHHHSCHHHHHHHHHHHHHH-TCE-EEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHhCCCeEEECCcccCchhHHHHHHHHHHHc-CCC-EEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCC
Confidence 34567777888522110134578999999995 885 8887774332 1 123555666899
Q ss_pred eEEEecCCCCH----Hhhhhhc------------CCCc-HHHHHH---HHHHHHHcCCCCEEEEEEEecCCCHhHHHHHH
Q 022377 87 SVNISLDTLVP----AKFEFLT------------RRKG-HEKVME---SINAAIEVGYNPVKVNCVVMRGFNDDEICDFV 146 (298)
Q Consensus 87 ~v~iSldg~~~----~~~~~ir------------~~~~-~~~v~~---~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~ 146 (298)
.+-+|+.+-+. +.|+.+. ..+. ++-+++ ++-.|...|+ -=.|+.-++. ...+|+.--.
T Consensus 179 ~iviS~K~S~v~~~i~ayr~la~~~dyPLHlGvTEAG~~~~G~ikSsigiG~LL~dGI-GDTIRVSLt~-~p~~Ev~va~ 256 (366)
T 3noy_A 179 NYKVSIKGSDVLQNVRANLIFAERTDVPLHIGITEAGMGTKGIIKSSVGIGILLYMGI-GDTVRVSLTD-DPVVEVETAY 256 (366)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHCCCCEEECCSSCCSHHHHHHHHHHHHHHHHHTTC-CSEECCCCSS-CHHHHHHHHH
T ss_pred eEEEeeecCChHHHHHHHHHHHhccCCCEEEccCCCCCCcceeeehHHHHHHHHHhcc-cceEEEeCCC-CcHHHHHHHH
Confidence 99999998654 2444432 1122 554444 6677777788 4455555665 5678887677
Q ss_pred HHHhhCCCeeEEEe--eecC-CCCCCcccCCCCHHHHHHHHHHhCC
Q 022377 147 ELTRDRPINIRFIE--FMPF-DGNVWNVKKLVPYAEMLDTVVKKFP 189 (298)
Q Consensus 147 ~~~~~~g~~~~~~~--~~p~-~~~~~~~~~~~~~~e~~~~i~~~~~ 189 (298)
+.++.+|...+-.+ -+|. ++. .++..++.+.+.++..
T Consensus 257 ~ILqslglR~~g~~~ISCPtCGRt------~~dl~~~~~~ie~~l~ 296 (366)
T 3noy_A 257 EILKSLGLRRRGVEIVACPTCGRI------EVDLPKVVKEVQEKLS 296 (366)
T ss_dssp HHHHHTTSCCSSCEEEECCCCTTC------CSCHHHHHHHHHHHTT
T ss_pred HHHHhcCCCcCCCEEEECCCCCCc------cccHHHHHHHHHHHHh
Confidence 77788776322222 2353 333 2456788888887764
No 406
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=24.85 E-value=3.1e+02 Score=24.23 Aligned_cols=95 Identities=8% Similarity=-0.027 Sum_probs=62.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++..++++.+.++++..+- ||+-..++.. ++.+++..++. |.+...+. ...++.+.+.+ ++.|++
T Consensus 236 ~~~~~~~A~~~~~~L~~~~i~~iE----qP~~~~d~~~-~~~l~~~~~iP---Ia~dE~~~~~~~~~~~i~~~a~d~v~~ 307 (425)
T 3vcn_A 236 HRLTPIEAARLGKDLEPYRLFWLE----DSVPAENQAG-FRLIRQHTTTP---LAVGEIFAHVWDAKQLIEEQLIDYLRA 307 (425)
T ss_dssp TCCCHHHHHHHHHHHGGGCCSEEE----CCSCCSSTTH-HHHHHHHCCSC---EEECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE----CCCChhhHHH-HHHHHhcCCCC---EEeCCCcCCHHHHHHHHHcCCCCeEec
Confidence 457888888888888888877665 7875434333 34444433443 55666655 34566666654 665555
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
.+. ..+++..+++....+.++|+ ++
T Consensus 308 k~~-----------~~GGit~~~~ia~~A~~~gi-~~ 332 (425)
T 3vcn_A 308 TVL-----------HAGGITNLKKIAAFADLHHV-KT 332 (425)
T ss_dssp CTT-----------TTTHHHHHHHHHHHHGGGTC-EE
T ss_pred Chh-----------hcCCHHHHHHHHHHHHHcCC-EE
Confidence 442 23568888999999999998 54
No 407
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=24.82 E-value=3.5e+02 Score=25.23 Aligned_cols=79 Identities=19% Similarity=0.269 Sum_probs=56.5
Q ss_pred CCCCHHHHHHHHHHH-----HhCCCCEEEEc-C---------CccCccc-----cHHHHHHHHhccCCCCcEEEEeCccc
Q 022377 13 QLLSLNEILRLAYLF-----VTSGVDKIRLT-G---------GEPTVRK-----DIEEACFHLSKLKGLKTLAMTTNGLT 72 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~-----~~~~~~~v~~t-G---------GEPll~~-----~~~~ii~~~~~~~~~~~v~i~TNG~l 72 (298)
..++.+.+.+.++.+ +++|...|.+= | |+....+ ++..+++++++ +|++ +.|-+....
T Consensus 24 ~~~~~~~~~~~ad~~~~~g~~~~G~~~~~iDdgW~~~~~d~~g~~~~~~~~fP~gl~~l~~~i~~-~Glk-~gi~~~~~~ 101 (614)
T 3a21_A 24 AKIDYSVIKKQVDAFVAAGLPAAGYTYINIDEGWWQGTRDSAGNITVDTAEWPGGMSAITAYIHS-KGLK-AGIYTDAGK 101 (614)
T ss_dssp TCCCHHHHHHHHHHHHHTTHHHHTCCEEECCTTSCCSCBCTTCCBCCCTTTSTTCHHHHHHHHHH-TTCE-EEEEEESSS
T ss_pred ccCCHHHHHHHHHHHHHcCHHhhCCEEEEECCCcCCCCcCCCCCEEECccccCCcHHHHHHHHHH-CCCe-eEEEecCCC
Confidence 357899999999987 66777888772 1 4444333 38899999999 5996 887664321
Q ss_pred ----------------------hHhhHHHHHHcCCCeEEEecC
Q 022377 73 ----------------------LARKLPKLKESGLTSVNISLD 93 (298)
Q Consensus 73 ----------------------l~~~~~~l~~~~~~~v~iSld 93 (298)
++..++.+.+-|++.|-+..-
T Consensus 102 ~~~~~~~p~~~~~~pg~g~~~~~~~~~~~~~~wGvd~lK~D~~ 144 (614)
T 3a21_A 102 DGCGYYYPTGRPAAPGSGSEGHYDQDMLQFSTWGFDFVKVDWC 144 (614)
T ss_dssp SCHHHHSCSSSCCCTTCSCTTCHHHHHHHHHHHTCSEEEEECH
T ss_pred ccccccCCCCCCCCCchhhHHHHHHHHHHHHHcCCcEEEeccc
Confidence 344677888889998887753
No 408
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=24.75 E-value=1.3e+02 Score=24.05 Aligned_cols=60 Identities=12% Similarity=0.027 Sum_probs=37.3
Q ss_pred CCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCe
Q 022377 85 LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPIN 155 (298)
Q Consensus 85 ~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~ 155 (298)
++-|.+.+||. .++ +......+.++|+.+++.|+ ++.+-+ |........+.+.+..+|+.
T Consensus 8 ~kli~~DlDGT---Ll~---~~~~~~~~~~ai~~l~~~Gi-~v~l~T----gr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 8 KKGYIIDIDGV---IGK---SVTPIPEGVEGVKKLKELGK-KIIFVS----NNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp CSEEEEECBTT---TEE---TTEECHHHHHHHHHHHHTTC-EEEEEE----CCSSSCHHHHHHHHHHTTCC
T ss_pred CCEEEEcCcCc---EEC---CCEeCcCHHHHHHHHHHcCC-eEEEEe----CcCCCCHHHHHHHHHHCCCC
Confidence 57789999994 222 22235679999999999999 664443 31222233445555566664
No 409
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=24.56 E-value=1.3e+02 Score=24.05 Aligned_cols=60 Identities=15% Similarity=0.047 Sum_probs=38.1
Q ss_pred CCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCe
Q 022377 85 LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPIN 155 (298)
Q Consensus 85 ~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~ 155 (298)
++-|.+.+||. .+ .+......+.++|+.+++.|+ ++.+-+--. +.. ...+...+.++|+.
T Consensus 5 ~kli~~DlDGT---Ll---~~~~~i~~~~eal~~l~~~G~-~vvl~Tn~~-gr~---~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 5 YKGYLIDLDGT---IY---KGKSRIPAGERFIERLQEKGI-PYMLVTNNT-TRT---PESVQEMLRGFNVE 64 (264)
T ss_dssp CCEEEECCBTT---TE---ETTEECHHHHHHHHHHHHHTC-CEEEEECCC-SSC---HHHHHHHHHTTTCC
T ss_pred CCEEEEeCCCc---eE---eCCEECcCHHHHHHHHHHCCC-eEEEEeCCC-CCC---HHHHHHHHHHCCCC
Confidence 56789999994 22 223335789999999999999 775443111 223 34455566667764
No 410
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=24.55 E-value=3e+02 Score=24.47 Aligned_cols=95 Identities=8% Similarity=0.050 Sum_probs=59.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVNI 90 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~i 90 (298)
.-.+.++..++++.+.++++..|- ||+-..++.. ++.+++..++ -|.++..+. ...++.+.+.+ ++.|++
T Consensus 249 ~~~~~~~A~~~~~~L~~~~i~~iE----eP~~~~d~~~-~~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~a~d~v~~ 320 (440)
T 3t6c_A 249 ERITPINAIHMAKALEPYQLFFLE----DPVAPENTEW-LKMLRQQSST---PIAMGELFVNVNEWKPLIDNKLIDYIRC 320 (440)
T ss_dssp TCSCHHHHHHHHHHTGGGCCSEEE----CSSCGGGGGG-HHHHHHHCCS---CEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCCCHHHHHHHHHHhhhcCCCEEE----CCCChhhHHH-HHHHHhhcCC---CEEeCcccCCHHHHHHHHHcCCccceee
Confidence 456778888888888777776665 7876444333 3334443344 356666655 34566666654 565554
Q ss_pred ecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 91 SLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 91 Sldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
.+. ..+++..+++....+.++|+ ++
T Consensus 321 k~~-----------~~GGit~~~~ia~~A~~~gi-~~ 345 (440)
T 3t6c_A 321 HIS-----------SIGGITPAKKIAIYSELNGV-RT 345 (440)
T ss_dssp CGG-----------GGTSHHHHHHHHHHHHHTTC-EE
T ss_pred chh-----------hhCCHHHHHHHHHHHHHcCC-EE
Confidence 432 23568889999999999998 54
No 411
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=24.55 E-value=3.4e+02 Score=23.45 Aligned_cols=138 Identities=9% Similarity=0.020 Sum_probs=78.8
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCc---------------cCcccc-HHHHHHHHhcc--CCCCcEEEEeCccch-H
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGE---------------PTVRKD-IEEACFHLSKL--KGLKTLAMTTNGLTL-A 74 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGE---------------Pll~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll-~ 74 (298)
..+.+++.+.+.++.+.|...|.+-.|. +.-+.+ ..++++.+++. .++. +.+.-|+... +
T Consensus 135 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~-l~vD~n~~~~~~ 213 (392)
T 2poz_A 135 ADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIE-LMVDLSGGLTTD 213 (392)
T ss_dssp CCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSE-EEEECTTCSCHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCE-EEEECCCCCCHH
Confidence 3578888888888888898888886431 111223 34777777763 3564 8899998654 3
Q ss_pred h---hHHHHHHcCCCeEEEecCCCCHHhhhhhcC--------CCcHHHHHHHHHHHHHcCCCCEEEEEEEec-CCCHhHH
Q 022377 75 R---KLPKLKESGLTSVNISLDTLVPAKFEFLTR--------RKGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEI 142 (298)
Q Consensus 75 ~---~~~~l~~~~~~~v~iSldg~~~~~~~~ir~--------~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~-~~n~~~i 142 (298)
+ .++.|.+.++.++.=.+...+.+.+..++. ..++.. .+.++.+.+.+...+ ++.-+.+ | -..+.
T Consensus 214 ~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~-~~~~~~~i~~~~~d~-v~ik~~~~G-Git~~ 290 (392)
T 2poz_A 214 ETIRFCRKIGELDICFVEEPCDPFDNGALKVISEQIPLPIAVGERVYT-RFGFRKIFELQACGI-IQPDIGTAG-GLMET 290 (392)
T ss_dssp HHHHHHHHHGGGCEEEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCH-HHHHHHHHTTTCCSE-ECCCTTTSS-CHHHH
T ss_pred HHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEecCCcCC-HHHHHHHHHcCCCCE-EecCccccC-CHHHH
Confidence 3 345566667776664454434444444442 112212 344555555443121 2221222 1 36677
Q ss_pred HHHHHHHhhCCCe
Q 022377 143 CDFVELTRDRPIN 155 (298)
Q Consensus 143 ~~i~~~~~~~g~~ 155 (298)
.++++++...|+.
T Consensus 291 ~~i~~~A~~~g~~ 303 (392)
T 2poz_A 291 KKICAMAEAYNMR 303 (392)
T ss_dssp HHHHHHHHTTTCE
T ss_pred HHHHHHHHHcCCe
Confidence 7888888888875
No 412
>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1
Probab=24.43 E-value=1.5e+02 Score=24.26 Aligned_cols=48 Identities=19% Similarity=0.197 Sum_probs=32.7
Q ss_pred HHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch
Q 022377 22 RLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL 73 (298)
Q Consensus 22 ~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll 73 (298)
.+++.+. +-..+.+++|.|+++.-..++++.+++ .++. +.+.-.-+.+
T Consensus 80 ~i~~~a~--~~~Va~L~~GDP~iy~~~~~l~~~~~~-~gi~-vevIPGiSs~ 127 (268)
T 1vhv_A 80 RLIERAK--SKSVVLLVPGDPMVATTHSAIKLEAER-KGVK-TRIIHGASIS 127 (268)
T ss_dssp HHHHHHT--TSEEEEEESBCTTSSSHHHHHHHHHHH-TTCC-EEEECCCCHH
T ss_pred HHHHHhC--CCCEEEEeCCCCcccCcHHHHHHHHHH-CCCc-EEEECCccHH
Confidence 3444433 324555689999999887777787777 4885 8887665544
No 413
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=24.42 E-value=2.3e+02 Score=24.89 Aligned_cols=43 Identities=19% Similarity=0.215 Sum_probs=28.3
Q ss_pred HHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEecCC
Q 022377 49 EEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDT 94 (298)
Q Consensus 49 ~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSldg 94 (298)
.+.++.+++..++. +.+- |....+..+.+.++|++.|.||-.|
T Consensus 241 ~~~i~~lr~~~~~P-vivK--gv~~~e~A~~a~~aGad~I~vs~~g 283 (392)
T 2nzl_A 241 WEDIKWLRRLTSLP-IVAK--GILRGDDAREAVKHGLNGILVSNHG 283 (392)
T ss_dssp HHHHHHHC--CCSC-EEEE--EECCHHHHHHHHHTTCCEEEECCGG
T ss_pred HHHHHHHHHhhCCC-EEEE--ecCCHHHHHHHHHcCCCEEEeCCCC
Confidence 35677777654554 5442 3333567889999999999998655
No 414
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=24.37 E-value=1.5e+02 Score=26.09 Aligned_cols=61 Identities=11% Similarity=0.047 Sum_probs=40.4
Q ss_pred HhhHHHHHHcCCCeEEEecCC--CCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEec
Q 022377 74 ARKLPKLKESGLTSVNISLDT--LVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMR 135 (298)
Q Consensus 74 ~~~~~~l~~~~~~~v~iSldg--~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~ 135 (298)
++.++.+++.|+..|.|.+.- ..+...+.......++.+-+.|+.+.++|+ .|.|..--.+
T Consensus 76 e~d~~~i~~~G~N~VRipi~~~~~~~~~~~py~~~~~l~~ld~vv~~a~~~Gi-~VilDlH~~p 138 (408)
T 1h4p_A 76 EQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSL-KVWVDLHGAA 138 (408)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTC-EEEEEEEECT
T ss_pred HHHHHHHHHCCCCEEEccCCHHHcccCCCCCCccccHHHHHHHHHHHHHHCCC-EEEEECCCCC
Confidence 456888999999999998742 111000001111258888889999999999 8877766543
No 415
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=24.37 E-value=3.7e+02 Score=23.73 Aligned_cols=96 Identities=8% Similarity=0.005 Sum_probs=61.4
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++. -++.+++..++ -|.+...+. ...++++.+.+ ++.|+
T Consensus 230 N~~~~~~~A~~~~~~Le~~~i~~iE----qP~~~~d~~-~~~~l~~~~~i---PIa~dE~~~~~~~~~~ll~~ga~d~v~ 301 (422)
T 3tji_A 230 HERLFPQQAVQLAKQLEPFQPYFIE----DILPPQQSA-WLEQVRQQSCV---PLALGELFNNPAEWHDLIVNRRIDFIR 301 (422)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEE----CCSCGGGGG-GHHHHHHHCCC---CEEECTTCCSGGGTHHHHHTTCCSEEC
T ss_pred CCCCCHHHHHHHHHHHHhhCCCeEE----CCCChhhHH-HHHHHHhhCCC---CEEEeCCcCCHHHHHHHHhcCCCCEEe
Confidence 3456788888888888888777665 787544433 33444443344 355666655 34566666654 56555
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
+.+. ..+++..+++-...+..+|+ ++
T Consensus 302 ~k~~-----------~~GGit~~~kia~lA~a~gv-~v 327 (422)
T 3tji_A 302 CHVS-----------QIGGITPALKLAHLCQAFGV-RL 327 (422)
T ss_dssp CCGG-----------GGTSHHHHHHHHHHHHHTTC-EE
T ss_pred cCcc-----------ccCCHHHHHHHHHHHHHcCC-EE
Confidence 4432 13568889999999999998 54
No 416
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=24.36 E-value=1.8e+02 Score=22.98 Aligned_cols=70 Identities=14% Similarity=0.254 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhCCCCEEEEcC--CccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcCCCeEEEe
Q 022377 19 EILRLAYLFVTSGVDKIRLTG--GEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 19 ~~~~~i~~~~~~~~~~v~~tG--GEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~~~~v~iS 91 (298)
+...+++.+.+.|+..+.++. +...-.+...++++.+++..++. +. -+|... .+.++.+.++|.+.|.+.
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~ip-vi--~~g~i~~~~~~~~~~~~Gad~V~i~ 106 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVSIP-VL--VGGGVRSLEDATTLFRAGADKVSVN 106 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCSSC-EE--EESSCCSHHHHHHHHHHTCSEEEES
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcCCC-EE--EECCCCCHHHHHHHHHcCCCEEEEC
Confidence 455667777788888787762 11111223456777777644554 43 344443 567788888999988887
No 417
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=24.34 E-value=1.4e+02 Score=25.18 Aligned_cols=61 Identities=13% Similarity=0.059 Sum_probs=40.1
Q ss_pred HhhHHHHHHcCCCeEEEecCC--CCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEec
Q 022377 74 ARKLPKLKESGLTSVNISLDT--LVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMR 135 (298)
Q Consensus 74 ~~~~~~l~~~~~~~v~iSldg--~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~ 135 (298)
++.++.+++.|++.|.|++.- ..++.....-....++.+-+.|+.+.++|+ .|.+..--.+
T Consensus 39 ~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~Gi-~vildlh~~p 101 (341)
T 1vjz_A 39 EEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGI-HICISLHRAP 101 (341)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTC-EEEEEEEEET
T ss_pred HHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcCC-EEEEEecCCC
Confidence 567889999999999988742 111000000012348888899999999999 8877665444
No 418
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=24.32 E-value=2.6e+02 Score=22.25 Aligned_cols=70 Identities=17% Similarity=0.227 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCccC-c-cccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcCCCeEEEe
Q 022377 19 EILRLAYLFVTSGVDKIRLTGGEPT-V-RKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 19 ~~~~~i~~~~~~~~~~v~~tGGEPl-l-~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~~~~v~iS 91 (298)
+...+++.+.+.|+..+.++..... . .+...++++.+++..++. +..+|... .+.++.+.++|.+.|.+.
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ip---vi~~ggI~~~~~~~~~~~~Gad~V~lg 103 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIP---FTVGGGIHDFETASELILRGADKVSIN 103 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCCSC---EEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCCCC---EEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 3444566777889888888742211 1 122457777777644553 44465544 567899999999988764
No 419
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=24.31 E-value=2.8e+02 Score=22.27 Aligned_cols=124 Identities=13% Similarity=0.195 Sum_probs=64.5
Q ss_pred HHHHHHHHHhCCCCEEEEcCCccCcc------c-cHHHHHHHHhccCCCCc--EEEEe----Cccc------------hH
Q 022377 20 ILRLAYLFVTSGVDKIRLTGGEPTVR------K-DIEEACFHLSKLKGLKT--LAMTT----NGLT------------LA 74 (298)
Q Consensus 20 ~~~~i~~~~~~~~~~v~~tGGEPll~------~-~~~~ii~~~~~~~~~~~--v~i~T----NG~l------------l~ 74 (298)
+...++.+.+.|...|.+..+.|... + ++.++-+.+++. |+.- +++.. |-.. +.
T Consensus 14 ~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~~~~ 92 (287)
T 2x7v_A 14 FDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKH-GIDWENAFCHSGYLINLASPKDDIWQKSVELLK 92 (287)
T ss_dssp GGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHH-TCCGGGEEEECCTTCCTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHc-CCCcceeEEecccccccCCCCHHHHHHHHHHHH
Confidence 44567777889999999987655321 1 345676777774 8741 33321 2110 11
Q ss_pred hhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc--CCCCEEEEEEEecC----CCHhHHHHHHHH
Q 022377 75 RKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV--GYNPVKVNCVVMRG----FNDDEICDFVEL 148 (298)
Q Consensus 75 ~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~--g~~~v~i~~vi~~~----~n~~~i~~i~~~ 148 (298)
+.++.....|...|.+..-.. .. . .....++++.+.++.+.+. |+ .+.+...-..+ .+.+++.++++.
T Consensus 93 ~~i~~A~~lG~~~v~~~~g~~-~~---~-~~~~~~~~~~~~l~~l~~~~~gv-~l~lEn~~~~~~~~~~~~~~~~~l~~~ 166 (287)
T 2x7v_A 93 KEVEICRKLGIRYLNIHPGSH-LG---T-GEEEGIDRIVRGLNEVLNNTEGV-VILLENVSQKGGNIGYKLEQLKKIRDL 166 (287)
T ss_dssp HHHHHHHHHTCCEEEECCEEC-TT---S-CHHHHHHHHHHHHHHHHTTCCSC-EEEEECCCCCTTEECSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEecCCC-CC---C-CHHHHHHHHHHHHHHHHcccCCC-EEEEeCCCCCCCccCCCHHHHHHHHHh
Confidence 224444556888777643221 10 0 0012377888888887653 55 44444332110 134455555554
Q ss_pred Hh
Q 022377 149 TR 150 (298)
Q Consensus 149 ~~ 150 (298)
+.
T Consensus 167 ~~ 168 (287)
T 2x7v_A 167 VD 168 (287)
T ss_dssp CS
T ss_pred cC
Confidence 43
No 420
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=24.14 E-value=3.4e+02 Score=23.32 Aligned_cols=134 Identities=7% Similarity=-0.116 Sum_probs=79.2
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccCcccc-HHHHHHHHhccC--CCCcEEEEeCccch-Hhh---HHHHHHcCCCe
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKD-IEEACFHLSKLK--GLKTLAMTTNGLTL-ARK---LPKLKESGLTS 87 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~-~~~ii~~~~~~~--~~~~v~i~TNG~ll-~~~---~~~l~~~~~~~ 87 (298)
-+++++.+.+.++.+.|...|.+-.|. .++ ..++++.+++.. ++ .+.+.-|+... ++. ++.|.+.++ +
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~g~---~~~~~~e~v~avr~a~g~d~-~l~vDan~~~~~~~a~~~~~~l~~~~i-~ 218 (379)
T 2rdx_A 144 RSEAETRAELARHRAAGYRQFQIKVGA---DWQSDIDRIRACLPLLEPGE-KAMADANQGWRVDNAIRLARATRDLDY-I 218 (379)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEECCS---CHHHHHHHHHHHGGGSCTTC-EEEEECTTCSCHHHHHHHHHHTTTSCC-E
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccC---CHHHHHHHHHHHHHhcCCCC-EEEEECCCCCCHHHHHHHHHHHHhCCe-E
Confidence 367888888888888899999998664 223 348888888743 46 48899998664 333 344555566 6
Q ss_pred EEEecCCCCHHhhhhhcCC--------CcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCeeE
Q 022377 88 VNISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIR 157 (298)
Q Consensus 88 v~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~~~ 157 (298)
+.=.+. +-+.+..++.. .+.. ..+.++.+.+.+... .++.-+.+-=...+..++++++...|+.+.
T Consensus 219 iE~P~~--~~~~~~~l~~~~~iPI~~de~i~-~~~~~~~~i~~~~~d-~v~ik~~~~GGit~~~~i~~~A~~~g~~~~ 292 (379)
T 2rdx_A 219 LEQPCR--SYEECQQVRRVADQPMKLDECVT-GLHMAQRIVADRGAE-ICCLKISNLGGLSKARRTRDFLIDNRMPVV 292 (379)
T ss_dssp EECCSS--SHHHHHHHHTTCCSCEEECTTCC-SHHHHHHHHHHTCCS-EEEEETTTTTSHHHHHHHHHHHHHTTCCEE
T ss_pred EeCCcC--CHHHHHHHHhhCCCCEEEeCCcC-CHHHHHHHHHcCCCC-EEEEeccccCCHHHHHHHHHHHHHcCCeEE
Confidence 653333 44555555531 1121 123344444444312 233333320146788888899988888643
No 421
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=24.08 E-value=1.1e+02 Score=23.06 Aligned_cols=27 Identities=19% Similarity=0.207 Sum_probs=22.7
Q ss_pred CccccHHHHHHHHhccCCCCcEEEEeCcc
Q 022377 43 TVRKDIEEACFHLSKLKGLKTLAMTTNGL 71 (298)
Q Consensus 43 ll~~~~~~ii~~~~~~~~~~~v~i~TNG~ 71 (298)
-+.|+..++++.+++. |+. +.+.||+.
T Consensus 68 ~~~~g~~e~L~~L~~~-G~~-v~ivT~~~ 94 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSL-GVP-GAAASRTS 94 (187)
T ss_dssp CCCTTHHHHHHHHHHH-TCC-EEEEECCS
T ss_pred CcchhHHHHHHHHHHC-Cce-EEEEeCCC
Confidence 4567899999999985 995 99999986
No 422
>1pch_A Phosphocarrier protein; phosphotransferase; 1.80A {Mycoplasma capricolum} SCOP: d.94.1.1
Probab=23.99 E-value=1.7e+02 Score=19.62 Aligned_cols=64 Identities=11% Similarity=0.120 Sum_probs=41.5
Q ss_pred cccc-HHHHHHHHhccCCCCcEEEEeCccchH-hhHHHHHHcCC---CeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHH
Q 022377 44 VRKD-IEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESGL---TSVNISLDTLVPAKFEFLTRRKGHEKVMESINA 118 (298)
Q Consensus 44 l~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll~-~~~~~l~~~~~---~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~ 118 (298)
||-. ...+++.+.+ .+. .+.+..++...+ +.+-.+...++ +.|.|+.+|.+++ .+++.|..
T Consensus 13 LHARPAa~~v~~a~~-f~s-~I~i~~~~~~vdaKSim~lmsLg~~~G~~i~i~a~G~De~------------~Al~~l~~ 78 (88)
T 1pch_A 13 LHARPASVLAKEASK-FSS-NITIIANEKQGNLKSIMNVMAMAIKTGTEITIQADGNDAD------------QAIQAIKQ 78 (88)
T ss_dssp SCHHHHHHHHHHHTT-CSS-EEEEEETTEEEETTCHHHHHHHCCCTTCEEEEEEESTTHH------------HHHHHHHH
T ss_pred cCHHHHHHHHHHHhh-CCC-eEEEEECCEEEehHhHHHHHhcCCCCCCEEEEEEeCCCHH------------HHHHHHHH
Confidence 4443 4477777777 466 488888776663 45555555554 4599999997654 55666665
Q ss_pred HHH
Q 022377 119 AIE 121 (298)
Q Consensus 119 l~~ 121 (298)
+.+
T Consensus 79 l~~ 81 (88)
T 1pch_A 79 TMI 81 (88)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 423
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=23.87 E-value=3.1e+02 Score=22.61 Aligned_cols=49 Identities=8% Similarity=0.058 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEecCCCH-------hHHHHHHHHHhhCCCe--eEE
Q 022377 109 HEKVMESINAAIEVGYNPVKVNCVVMRGFND-------DEICDFVELTRDRPIN--IRF 158 (298)
Q Consensus 109 ~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~-------~~i~~i~~~~~~~g~~--~~~ 158 (298)
.+.+.+.|+.+.+.|. +..+-....+.... +.+.++.+.+.+.|+. +.+
T Consensus 107 ~~~~~~~i~~A~~lG~-~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~ 164 (303)
T 3l23_A 107 MEYWKATAADHAKLGC-KYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGY 164 (303)
T ss_dssp HHHHHHHHHHHHHTTC-SEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEE
T ss_pred HHHHHHHHHHHHHcCC-CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEE
Confidence 5566778888888898 43221111111122 2366777888888987 654
No 424
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=23.77 E-value=2e+02 Score=22.89 Aligned_cols=71 Identities=17% Similarity=0.180 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCccC--ccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEe
Q 022377 19 EILRLAYLFVTSGVDKIRLTGGEPT--VRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 19 ~~~~~i~~~~~~~~~~v~~tGGEPl--l~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iS 91 (298)
+...+++.+.+.|+..|.++..... -.....++++.+++..++. + +...|....+.++.+.+.|.+.|.+.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~iP-v-i~~Ggi~~~~~~~~~~~~Gad~V~lg 104 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAERVFIP-L-TVGGGVRSLEDARKLLLSGADKVSVN 104 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTCCSC-E-EEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhCCCC-E-EEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 4455666677778888888732211 1223457777777754654 4 32444334678888888999988875
No 425
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=23.57 E-value=3.5e+02 Score=23.23 Aligned_cols=98 Identities=15% Similarity=0.182 Sum_probs=63.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchH--hhHHHHHHcC-CCeEE
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA--RKLPKLKESG-LTSVN 89 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~--~~~~~l~~~~-~~~v~ 89 (298)
.-.+.++..++++.+.++++..+- ||+-..++. -.+.+++..++ -|.+++.+.+ +.++++.+.+ ++.|+
T Consensus 209 ~~~~~~~a~~~~~~l~~~~i~~iE----~P~~~~~~~-~~~~l~~~~~i---PIa~dE~~~~~~~~~~~~i~~~~~d~v~ 280 (382)
T 1rvk_A 209 HWYSRTDALALGRGLEKLGFDWIE----EPMDEQSLS-SYKWLSDNLDI---PVVGPESAAGKHWHRAEWIKAGACDILR 280 (382)
T ss_dssp TTCCHHHHHHHHHHHHTTTCSEEE----CCSCTTCHH-HHHHHHHHCSS---CEEECSSCSSHHHHHHHHHHTTCCSEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEe----CCCChhhHH-HHHHHHhhCCC---CEEEeCCccCcHHHHHHHHHcCCCCEEe
Confidence 446788888888888888877664 787543433 34444443344 3566666554 4566666654 67676
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 130 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 130 (298)
+.+. ..+++..+++.++.+.++|+ ++.+.
T Consensus 281 ik~~-----------~~GGit~~~~i~~~A~~~g~-~~~~~ 309 (382)
T 1rvk_A 281 TGVN-----------DVGGITPALKTMHLAEAFGM-ECEVH 309 (382)
T ss_dssp ECHH-----------HHTSHHHHHHHHHHHHHTTC-CEEEC
T ss_pred eCch-----------hcCCHHHHHHHHHHHHHcCC-eEeec
Confidence 6431 12568889999999999999 76555
No 426
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=23.57 E-value=1.4e+02 Score=27.45 Aligned_cols=59 Identities=12% Similarity=0.205 Sum_probs=40.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEc--C---------------------------CccCccccHHHHHHHHhccCCCC
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLT--G---------------------------GEPTVRKDIEEACFHLSKLKGLK 62 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~t--G---------------------------GEPll~~~~~~ii~~~~~~~~~~ 62 (298)
+..++.+.++++|+.+..++...+.+. - |+..-..++.+|++|++++ ++.
T Consensus 193 R~f~~~~~ik~~id~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~~~~~~~~~g~YT~~di~eIv~YA~~r-gI~ 271 (525)
T 3gh5_A 193 RHFFTVDEVKRQIDLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSKGQVGGGPGGYYTQEQFKDIVSYAAER-YIE 271 (525)
T ss_dssp SSCCCHHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBCHHHHHHHHHHHHTT-TCE
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEEEeccCCccccccccchhhhhccCccccCCCCCCCcCHHHHHHHHHHHHHc-CCE
Confidence 567899999999999999887766553 1 2233445688889998884 774
Q ss_pred cEE--EEeCccc
Q 022377 63 TLA--MTTNGLT 72 (298)
Q Consensus 63 ~v~--i~TNG~l 72 (298)
|- |.+=|..
T Consensus 272 -VIPEID~PGH~ 282 (525)
T 3gh5_A 272 -VIPEIDMPGHT 282 (525)
T ss_dssp -EEEECCCSSSC
T ss_pred -EEEEecccchH
Confidence 54 3444543
No 427
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=23.52 E-value=3.1e+02 Score=24.37 Aligned_cols=138 Identities=12% Similarity=0.056 Sum_probs=83.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCccCc----------ccc-HHHHHHHHhcc--CCCCcEEEEeCccch-Hh---hH
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTGGEPTV----------RKD-IEEACFHLSKL--KGLKTLAMTTNGLTL-AR---KL 77 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tGGEPll----------~~~-~~~ii~~~~~~--~~~~~v~i~TNG~ll-~~---~~ 77 (298)
.++|++.+.++++.+.|.+.+.+-.|.|.. ..+ -.+.++.+++. .++ .+.+.-|+... ++ .+
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~-~L~vDan~~~t~~~A~~~~ 223 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKA-DLLFGTHGQFTTAGAIRLG 223 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSS-EEEECCCSCBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCC-eEEEeCCCCCCHHHHHHHH
Confidence 578898888888888999999986554421 112 34667777763 356 48899998765 33 34
Q ss_pred HHHHHcCCCeEEEecCCCCHHhhhhhcCC--------CcHHHHHHHHHHHHHcCCCCEEEEEEEec-CCCHhHHHHHHHH
Q 022377 78 PKLKESGLTSVNISLDTLVPAKFEFLTRR--------KGHEKVMESINAAIEVGYNPVKVNCVVMR-GFNDDEICDFVEL 148 (298)
Q Consensus 78 ~~l~~~~~~~v~iSldg~~~~~~~~ir~~--------~~~~~v~~~i~~l~~~g~~~v~i~~vi~~-~~n~~~i~~i~~~ 148 (298)
+.|.+.++.+|.=.+...+.+.+..++.. .+.. ....++.+.+.|...+ ++.-+++ | -..+..+++++
T Consensus 224 ~~Le~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~l~~g~~D~-v~~d~~~~G-Git~~~kia~l 300 (433)
T 3rcy_A 224 QAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLT-TKAEFAPVLREGAAAI-LQPALGRAG-GIWEMKKVAAM 300 (433)
T ss_dssp HHHGGGCCSEEECCSCTTCHHHHHHHHHHSSSCEEECTTCC-SHHHHHHHHHTTCCSE-ECCCHHHHT-HHHHHHHHHHH
T ss_pred HHhhhcCCCEEECCCChhhHHHHHHHHhccCCCEEecCCCC-CHHHHHHHHHcCCCCE-EEeCchhcC-CHHHHHHHHHH
Confidence 66777788888766654445555555421 1111 1233444555543122 2322222 1 35677888889
Q ss_pred HhhCCCee
Q 022377 149 TRDRPINI 156 (298)
Q Consensus 149 ~~~~g~~~ 156 (298)
+...|+.+
T Consensus 301 A~~~gv~~ 308 (433)
T 3rcy_A 301 AEVYNAQM 308 (433)
T ss_dssp HHTTTCEE
T ss_pred HHHcCCEE
Confidence 98888854
No 428
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=23.51 E-value=3.2e+02 Score=22.69 Aligned_cols=124 Identities=12% Similarity=0.144 Sum_probs=70.4
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEe-CccchHhhHHHHHHcCCCeEEEec
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTT-NGLTLARKLPKLKESGLTSVNISL 92 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~T-NG~ll~~~~~~l~~~~~~~v~iSl 92 (298)
..+.+++.+..+ +.|+....+....+.- .+-..+++.+++..+. ...+.+ +....++.++++.+.|+..|.+.+
T Consensus 53 ~~~~e~l~~~m~---~~GI~~~Vlvq~~~~~-~dN~~ll~~l~~~~~r-~~Gva~vdp~~~~~eL~~l~~~G~rGvR~~~ 127 (303)
T 4d9a_A 53 DAGPDMLFALRD---HLGFARNVIVQASCHG-TDNAATLDAIARAQGK-ARGIAVVDPAIDEAELAALHEGGMRGIRFNF 127 (303)
T ss_dssp CBCHHHHHHHHH---HHTCSEEEEECCGGGT-TCCHHHHHHHHHTTTS-EEEEECCCTTCCHHHHHHHHHTTEEEEEEEC
T ss_pred CCCHHHHHHHHH---HcCCCeEEEecccccc-ccHHHHHHHHHhCCCc-EEEEEEeCCCCCHHHHHHHHHCCCCEEEeec
Confidence 567777755554 5688766665443321 1222233333343332 244432 222224678888888888888887
Q ss_pred CCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhCCCeeE
Q 022377 93 DTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDRPINIR 157 (298)
Q Consensus 93 dg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~g~~~~ 157 (298)
... + .+.-........++.+.+ |. .+.+.+ ...++.++.+++.+.++.+.
T Consensus 128 ~~~-~------~~~~~~~~~~~~~~~l~~-gl-~v~l~~------~~~~l~~l~~~~~~~~~~iV 177 (303)
T 4d9a_A 128 LKR-L------VDDAPKDKFLEVAGRLPA-GW-HVVIYF------EADILEELRPFMDAIPVPIV 177 (303)
T ss_dssp CTT-T------CSCCCHHHHHHHHTSCCT-TC-EEEEEC------CGGGHHHHHHHHHHCSSCEE
T ss_pred ccC-C------ccccCHHHHHHHHHHHhc-CC-EEEEec------ccccHHHHHHHHHHCCCcEE
Confidence 542 1 112235666777777778 88 665543 23467788888888755543
No 429
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=23.45 E-value=2.6e+02 Score=24.23 Aligned_cols=135 Identities=13% Similarity=-0.015 Sum_probs=67.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCC--ccCc------cccHHHHHHHHhccCCCCcEEEEeCc---------cch--
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTGG--EPTV------RKDIEEACFHLSKLKGLKTLAMTTNG---------LTL-- 73 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tGG--EPll------~~~~~~ii~~~~~~~~~~~v~i~TNG---------~ll-- 73 (298)
..+++++. ++.+.+.|...|.|... -|.- ..++.++-+.+++. |+.-.++.+|. .+.
T Consensus 31 ~~~~~~e~---l~~aa~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~-GL~i~~~~~~~f~~p~~~~g~l~sp 106 (393)
T 1xim_A 31 TALDPVEA---VHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDET-GLIVPMVTTNLFTHPVFKDGGFTSN 106 (393)
T ss_dssp CCCCHHHH---HHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHH-TCBCCEEECCCSSSGGGTTCSTTCS
T ss_pred CCCCHHHH---HHHHHHhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHh-CCEEEEEecCCcCCcccccCCCCCC
Confidence 35677775 44555668899998721 1221 12344666667774 88623566642 222
Q ss_pred H------------hhHHHHHHcCCCeEEEecC--CCCHHhhhhhcCCCcHHHHHHHHHHHHH----c--CCCCEEEEEEE
Q 022377 74 A------------RKLPKLKESGLTSVNISLD--TLVPAKFEFLTRRKGHEKVMESINAAIE----V--GYNPVKVNCVV 133 (298)
Q Consensus 74 ~------------~~~~~l~~~~~~~v~iSld--g~~~~~~~~ir~~~~~~~v~~~i~~l~~----~--g~~~v~i~~vi 133 (298)
+ +.++...+.|...|.+..- |.+ ..........+++..++++.+.+ . |+ .+.+...-
T Consensus 107 d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~--~~~~~~~~~~~~~~~e~L~~l~~~A~~~g~gv-~l~lE~~~ 183 (393)
T 1xim_A 107 DRSVRRYAIRKVLRQMDLGAELGAKTLVLWGGREGAE--YDSAKDVSAALDRYREALNLLAQYSEDRGYGL-RFAIEPKP 183 (393)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEES--SGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCC-EEEEECCS
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCCc--CCccCCHHHHHHHHHHHHHHHHHHHHhcCCCc-EEEEecCC
Confidence 1 1233344568887776531 111 00000001236677777776654 3 55 55554431
Q ss_pred ec---CCCHhHHHHHHHHHhhCCC
Q 022377 134 MR---GFNDDEICDFVELTRDRPI 154 (298)
Q Consensus 134 ~~---~~n~~~i~~i~~~~~~~g~ 154 (298)
.. +.......+..+++...+.
T Consensus 184 ~~~~~~~~~~t~~~~~~ll~~v~~ 207 (393)
T 1xim_A 184 NEPRGDILLPTAGHAIAFVQELER 207 (393)
T ss_dssp SSSSSEESSCSHHHHHHHHTTSSS
T ss_pred CCCCCCCcCCCHHHHHHHHHHhCC
Confidence 10 0112346667777766554
No 430
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=23.35 E-value=2.4e+02 Score=24.29 Aligned_cols=94 Identities=11% Similarity=0.130 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+. +++ .+- ||+- -.+..+.+++..++. |.+++.+. .+.++++.+.+ .+.|+
T Consensus 198 n~~~~~~~a~~~~~~l~-~~i-~iE----qP~~---d~~~~~~l~~~~~iP---I~~dE~~~~~~~~~~~i~~~~~d~v~ 265 (378)
T 2qdd_A 198 NRAWTPAIAVEVLNSVR-ARD-WIE----QPCQ---TLDQCAHVARRVANP---IMLDECLHEFSDHLAAWSRGACEGVK 265 (378)
T ss_dssp TTCCCHHHHHHHHTSCC-CCC-EEE----CCSS---SHHHHHHHHTTCCSC---EEECTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CCCCCHHHHHHHHHHhC-CCc-EEE----cCCC---CHHHHHHHHHhCCCC---EEECCCcCCHHHHHHHHHhCCCCEEE
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
+.+.-. +++...++.++.+.++|+ ++.+
T Consensus 266 ik~~~~-----------GGi~~~~~i~~~A~~~g~-~~~~ 293 (378)
T 2qdd_A 266 IKPNRV-----------GGLTRARQIRDFGVSVGW-QMHI 293 (378)
T ss_dssp ECHHHH-----------TSHHHHHHHHHHHHHHTC-EEEE
T ss_pred eccccc-----------CCHHHHHHHHHHHHHcCC-eEEe
No 431
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=23.25 E-value=2.9e+02 Score=22.10 Aligned_cols=70 Identities=19% Similarity=0.150 Sum_probs=50.3
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccC-CCCcEEEEeCccch-HhhHHHHHHcCCCeEEEe
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK-GLKTLAMTTNGLTL-ARKLPKLKESGLTSVNIS 91 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~-~~~~v~i~TNG~ll-~~~~~~l~~~~~~~v~iS 91 (298)
-.+.++...+.+.+.+-|++.+.++-- .++-.+.++.+++.. +. .+ --|+.+ .+.++...++|.+ +.+|
T Consensus 21 ~~~~~~a~~~a~al~~gGi~~iEvt~~----t~~a~~~I~~l~~~~p~~-~I---GAGTVlt~~~a~~ai~AGA~-fivs 91 (217)
T 3lab_A 21 IDDLVHAIPMAKALVAGGVHLLEVTLR----TEAGLAAISAIKKAVPEA-IV---GAGTVCTADDFQKAIDAGAQ-FIVS 91 (217)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEEETT----STTHHHHHHHHHHHCTTS-EE---EEECCCSHHHHHHHHHHTCS-EEEE
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeCC----CccHHHHHHHHHHHCCCC-eE---eeccccCHHHHHHHHHcCCC-EEEe
Confidence 357788999999999999998888532 345567777776632 33 23 336777 5789999999999 5577
Q ss_pred c
Q 022377 92 L 92 (298)
Q Consensus 92 l 92 (298)
-
T Consensus 92 P 92 (217)
T 3lab_A 92 P 92 (217)
T ss_dssp S
T ss_pred C
Confidence 3
No 432
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=23.23 E-value=3.8e+02 Score=23.44 Aligned_cols=96 Identities=14% Similarity=0.123 Sum_probs=64.9
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchH-hhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~-~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++. -++.+++..++ -|.+.....+ +.++++.+.+ ++.|+
T Consensus 216 n~~~~~~~A~~~~~~l~~~~i~~iE----eP~~~~~~~-~~~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~a~d~v~ 287 (404)
T 4e5t_A 216 HGQFTVSGAKRLARRLEAYDPLWFE----EPIPPEKPE-DMAEVARYTSI---PVATGERLCTKYEFSRVLETGAASILQ 287 (404)
T ss_dssp CSCBCHHHHHHHHHHHGGGCCSEEE----CCSCTTCHH-HHHHHHHHCSS---CEEECTTCCHHHHHHHHHHHTCCSEEC
T ss_pred CCCcCHHHHHHHHHHHhhcCCcEEE----CCCCcccHH-HHHHHHhhCCC---CEEeCCCcCCHHHHHHHHHhCCCCEEe
Confidence 4557889999999999888877775 786544544 34455553354 3667776653 4566666555 66555
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
+.+- ..+++..+++-...+.++|+ ++
T Consensus 288 ~d~~-----------~~GGit~~~~ia~~A~~~gi-~~ 313 (404)
T 4e5t_A 288 MNLG-----------RVGGLLEAKKIAAMAECHSA-QI 313 (404)
T ss_dssp CCTT-----------TSSCHHHHHHHHHHHHHTTC-EE
T ss_pred cCcc-----------ccCCHHHHHHHHHHHHHcCC-EE
Confidence 5442 23568889999999999999 55
No 433
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=23.16 E-value=3.2e+02 Score=22.52 Aligned_cols=101 Identities=14% Similarity=0.084 Sum_probs=58.4
Q ss_pred HHHHHHHHHhCCCCEEEEcCCcc--CccccHHHHHHHHhccCCCCcEE-EEeCcc--c----------------------
Q 022377 20 ILRLAYLFVTSGVDKIRLTGGEP--TVRKDIEEACFHLSKLKGLKTLA-MTTNGL--T---------------------- 72 (298)
Q Consensus 20 ~~~~i~~~~~~~~~~v~~tGGEP--ll~~~~~~ii~~~~~~~~~~~v~-i~TNG~--l---------------------- 72 (298)
+...++.+.+.|...|-+.+..+ ....+..++-+.+.+ .|+. +. +.+... .
T Consensus 31 ~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~-~GL~-v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 108 (303)
T 3l23_A 31 VAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAED-AGLK-IISSHVNPVDTSISDPFKAMIFKYSKEVTPKIME 108 (303)
T ss_dssp HHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHH-TTCE-EEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHH-cCCe-EEEEecccccccccCcccccccccchhhHHHHHH
Confidence 45567778889999999986432 223346677777777 4986 53 433220 0
Q ss_pred -hHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHH----HcCCCC--EEEE
Q 022377 73 -LARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAI----EVGYNP--VKVN 130 (298)
Q Consensus 73 -l~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~----~~g~~~--v~i~ 130 (298)
+.+.++.....|...|.+.- ..+. .....++.+.++++.+. ++|+ . +.+.
T Consensus 109 ~~~~~i~~A~~lG~~~v~~~~--~~~~-----~~~~~~~~~~~~l~~l~~~a~~~Gv-~~~l~~E 165 (303)
T 3l23_A 109 YWKATAADHAKLGCKYLIQPM--MPTI-----TTHDEAKLVCDIFNQASDVIKAEGI-ATGFGYH 165 (303)
T ss_dssp HHHHHHHHHHHTTCSEEEECS--CCCC-----CSHHHHHHHHHHHHHHHHHHHHTTC-TTCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECC--CCCC-----CCHHHHHHHHHHHHHHHHHHHHCCC-cceEEEc
Confidence 11234555666889888752 1111 01123666666665554 4688 7 6654
No 434
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=23.07 E-value=71 Score=27.62 Aligned_cols=53 Identities=19% Similarity=0.186 Sum_probs=30.5
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEc---------------CCccCccc-cHHHHHHHHhccCCCCcEEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLT---------------GGEPTVRK-DIEEACFHLSKLKGLKTLAM 66 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~t---------------GGEPll~~-~~~~ii~~~~~~~~~~~v~i 66 (298)
+...+.+.....++.+++.|+..|.|. |+..+-.. .+..+++.+++. |+. |.+
T Consensus 47 ~~~~~~~~~~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~-GL~-V~l 115 (343)
T 3civ_A 47 HGTWGTDEARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHAL-GLK-VCL 115 (343)
T ss_dssp TTGGGSHHHHHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHT-TCE-EEE
T ss_pred CCCcCchhHHHHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHC-CCE-EEE
Confidence 344455555677777777777777662 22222222 256777777774 774 644
No 435
>1kkl_H Phosphocarrier protein HPR; phosphorylation, protein kinase, bacteria, protein/protein interaction, transferase; 2.80A {Bacillus subtilis} SCOP: d.94.1.1 PDB: 1kkm_H*
Probab=23.06 E-value=1.9e+02 Score=19.95 Aligned_cols=67 Identities=12% Similarity=0.196 Sum_probs=44.5
Q ss_pred cccc-HHHHHHHHhccCCCCcEEEEeCccchH-hhHHHHHHcCC---CeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHH
Q 022377 44 VRKD-IEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESGL---TSVNISLDTLVPAKFEFLTRRKGHEKVMESINA 118 (298)
Q Consensus 44 l~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll~-~~~~~l~~~~~---~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~ 118 (298)
||-. ...+++.+.+. +. .+.|..++...+ +.+-.+...++ +.|.|+.+|.+++ .+++.|..
T Consensus 26 LHARPAa~~v~~A~~f-~s-~I~i~~~~~~vdAKSIm~lmsLg~~~G~~i~i~a~G~Dee------------~Al~~l~~ 91 (100)
T 1kkl_H 26 IHARPATVLVQTASKY-DA-DVNLEYNGKTVNLKSIMGVMSLGIAKGAEITISASGADEN------------DALNALEE 91 (100)
T ss_dssp SCHHHHHHHHHHHHTC-SS-EEEEEETTEEEETTCHHHHHHTCCCTTCEEEEEEESTTHH------------HHHHHHHH
T ss_pred cCHHHHHHHHHHHhhC-CC-eEEEEECCEEEecHhHHHHhcCCCCCCCEEEEEEeCCCHH------------HHHHHHHH
Confidence 4443 45778877774 76 488888877663 55666666554 5699999997654 56666666
Q ss_pred HHHc-CC
Q 022377 119 AIEV-GY 124 (298)
Q Consensus 119 l~~~-g~ 124 (298)
+.+. |+
T Consensus 92 li~~~~f 98 (100)
T 1kkl_H 92 TMKSERL 98 (100)
T ss_dssp HHHHTTC
T ss_pred HHHhcCC
Confidence 6654 44
No 436
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=23.03 E-value=1.4e+02 Score=27.37 Aligned_cols=58 Identities=14% Similarity=0.169 Sum_probs=41.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcC-----------------------------CccCccccHHHHHHHHhccCCCC
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTG-----------------------------GEPTVRKDIEEACFHLSKLKGLK 62 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tG-----------------------------GEPll~~~~~~ii~~~~~~~~~~ 62 (298)
+..++.+.++++|+.+..++...+.+.= |+..-..++.+|++|++++ ++.
T Consensus 168 R~f~~~~~ik~~id~ma~~KlN~lh~HltDdq~wriei~~~P~Lt~~ga~~~~~~~~~g~YT~~di~eiv~yA~~r-gI~ 246 (512)
T 1jak_A 168 RHFFGVDEVKRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYYTKAEYKEIVRYAASR-HLE 246 (512)
T ss_dssp SSCCCHHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBCHHHHHHHHHHHHHT-TCE
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEEEeccCCCceehhhhhHHHHhhcCccccCCCCCCCCCHHHHHHHHHHHHHc-CCE
Confidence 5679999999999999998877666531 2233445688999999884 874
Q ss_pred cEE--EEeCcc
Q 022377 63 TLA--MTTNGL 71 (298)
Q Consensus 63 ~v~--i~TNG~ 71 (298)
|. |.+=|.
T Consensus 247 -VIPEID~PGH 256 (512)
T 1jak_A 247 -VVPEIDMPGH 256 (512)
T ss_dssp -EEEECCCSSS
T ss_pred -EEEccCCCch
Confidence 54 344454
No 437
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=22.95 E-value=3.2e+02 Score=22.51 Aligned_cols=152 Identities=16% Similarity=0.126 Sum_probs=87.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEc--CCccCcccc------------------HHHHHHHHhcc-CCCCcEEEEe--C
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLT--GGEPTVRKD------------------IEEACFHLSKL-KGLKTLAMTT--N 69 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~t--GGEPll~~~------------------~~~ii~~~~~~-~~~~~v~i~T--N 69 (298)
..-+.+...+++..+.+.|+..|.+. =-+|+.... +.++++.+++. ..+. +.+-| |
T Consensus 27 GdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~P-ivlm~Y~n 105 (267)
T 3vnd_A 27 GDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMP-IGLLLYAN 105 (267)
T ss_dssp TSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCC-EEEEECHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCC-EEEEecCc
Confidence 34677889999999999888766664 477777643 24566666653 3554 54443 4
Q ss_pred ccc---hHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHH
Q 022377 70 GLT---LARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFV 146 (298)
Q Consensus 70 G~l---l~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~ 146 (298)
-.+ +++.++.+.++|++.+.+. |-+- +...+.++.++++|+ .+ -..+.|....+.+..+.
T Consensus 106 pv~~~g~e~f~~~~~~aGvdgvii~-Dlp~-------------ee~~~~~~~~~~~gl-~~--i~liaP~t~~eri~~i~ 168 (267)
T 3vnd_A 106 LVFANGIDEFYTKAQAAGVDSVLIA-DVPV-------------EESAPFSKAAKAHGI-AP--IFIAPPNADADTLKMVS 168 (267)
T ss_dssp HHHHHCHHHHHHHHHHHTCCEEEET-TSCG-------------GGCHHHHHHHHHTTC-EE--ECEECTTCCHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHcCCCEEEeC-CCCH-------------hhHHHHHHHHHHcCC-eE--EEEECCCCCHHHHHHHH
Confidence 322 2568999999999988885 5542 234556677788888 43 34556633455566666
Q ss_pred HHHhhCCCeeEEEeeecCCCCCCcccCCCCHHHHHHHHHHh
Q 022377 147 ELTRDRPINIRFIEFMPFDGNVWNVKKLVPYAEMLDTVVKK 187 (298)
Q Consensus 147 ~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~e~~~~i~~~ 187 (298)
+... |+ +......++.+.. ........+.++.+++.
T Consensus 169 ~~~~--gf-vY~vS~~GvTG~~--~~~~~~~~~~v~~vr~~ 204 (267)
T 3vnd_A 169 EQGE--GY-TYLLSRAGVTGTE--SKAGEPIENILTQLAEF 204 (267)
T ss_dssp HHCC--SC-EEESCCCCCC----------CHHHHHHHHHTT
T ss_pred HhCC--Cc-EEEEecCCCCCCc--cCCcHHHHHHHHHHHHh
Confidence 5432 22 2222334433322 11123456666776654
No 438
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=22.88 E-value=2.3e+02 Score=27.26 Aligned_cols=83 Identities=12% Similarity=0.101 Sum_probs=55.3
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcC-Ccc-------Cccc-----cHHHHHHHHhccCCCCcEE------EEeCcc-
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTG-GEP-------TVRK-----DIEEACFHLSKLKGLKTLA------MTTNGL- 71 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tG-GEP-------ll~~-----~~~~ii~~~~~~~~~~~v~------i~TNG~- 71 (298)
+..++.+.++++|+.+..++...+.++= -+| -.++ ++.+|+++++++ ++. |. +...+.
T Consensus 160 r~~~~~~~~~~~id~ma~~K~N~~h~hl~Dd~~~~~~wr~~y~~~~~~~~~elv~ya~~r-gI~-vv~~i~P~~~~~~~~ 237 (737)
T 2v5d_A 160 GTPWTHQDRLDQIKFYGENKLNTYIYAPKDDPYHREKWREPYPESEMQRMQELINASAEN-KVD-FVFGISPGIDIRFDG 237 (737)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCCEEECCCSCCSTTTTTC-----CTTHHHHHHHHHHHHHT-TCE-EEECCCCGGGCCCSS
T ss_pred CCCCCHHHHHHHHHHHHHhCCeEEEEecccccchhhccCcCCCHHHHHHHHHHHHHHHHC-CCE-EEEecCCCccccCCC
Confidence 4568999999999999998877777651 111 1122 588999999994 884 53 111111
Q ss_pred --------chHhhHHHHHHcCCCeEEEecCCCC
Q 022377 72 --------TLARKLPKLKESGLTSVNISLDTLV 96 (298)
Q Consensus 72 --------ll~~~~~~l~~~~~~~v~iSldg~~ 96 (298)
.+..+++++.+.|...+.|-.|-..
T Consensus 238 ~~~~~~~~~l~~~~~~~~~~g~~~f~ig~DEi~ 270 (737)
T 2v5d_A 238 DAGEEDFNHLITKAESLYDMGVRSFAIYWDDIQ 270 (737)
T ss_dssp BTTHHHHHHHHHHHHHHHHHTCCEEEEECSSCC
T ss_pred cccHHHHHHHHHHHHHHHhcCCcEEEEcCccCC
Confidence 1234566677788999999888764
No 439
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=22.83 E-value=1e+02 Score=24.82 Aligned_cols=39 Identities=18% Similarity=0.080 Sum_probs=26.2
Q ss_pred ccHHHHHHHHhccCCCCcEEEEeC--ccchHhhHHHHHHcCCC
Q 022377 46 KDIEEACFHLSKLKGLKTLAMTTN--GLTLARKLPKLKESGLT 86 (298)
Q Consensus 46 ~~~~~ii~~~~~~~~~~~v~i~TN--G~ll~~~~~~l~~~~~~ 86 (298)
+...+.++.+++. |+. +.+.|| |.........+...|+.
T Consensus 24 ~~~~eal~~l~~~-G~~-vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 24 PAGERFIERLQEK-GIP-YMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp HHHHHHHHHHHHH-TCC-EEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHC-CCe-EEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 5667888888874 885 888888 44445555666665553
No 440
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3
Probab=22.76 E-value=3.3e+02 Score=22.60 Aligned_cols=73 Identities=14% Similarity=0.078 Sum_probs=49.5
Q ss_pred CCCCcEEEEeCccch-HhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEe
Q 022377 59 KGLKTLAMTTNGLTL-ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVM 134 (298)
Q Consensus 59 ~~~~~v~i~TNG~ll-~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~ 134 (298)
.++. ++...|...+ +.....+...+++.+.+- ....-+....-+|.-+|+.+=+.++.+++.|+ .+...+++.
T Consensus 11 ~~~~-~G~a~~~~~~~~~~~~~~~~~~fn~~t~e-n~~kW~~~ep~~g~~~~~~~D~~v~~a~~~gi-~v~gh~lvW 84 (302)
T 1nq6_A 11 KGRY-FGAAVAANHLGEAAYASTLDAQFGSVTPE-NEMKWDAVESSRNSFSFSAADRIVSHAQSKGM-KVRGHTLVW 84 (302)
T ss_dssp TTCE-EEEEECGGGTTSHHHHHHHHHHCSEEEES-STTSHHHHCSBTTBCCCHHHHHHHHHHHHHTC-EEEEEEEEE
T ss_pred cCCE-EEEEcChhhcCCHHHHHHHHhcCCeEEEc-CceeeccccCCCCcCCcHHHHHHHHHHHHCCC-EEEEEeccc
Confidence 4774 8888888777 456777888889988873 12222322233344458888888899999999 887666653
No 441
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=22.71 E-value=2.7e+02 Score=21.61 Aligned_cols=105 Identities=12% Similarity=0.019 Sum_probs=53.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCcccc-HHHHHHHHhccCCCCcEEEEe-Cccc--------hH---
Q 022377 8 LTPKPQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKD-IEEACFHLSKLKGLKTLAMTT-NGLT--------LA--- 74 (298)
Q Consensus 8 ~~~~~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~-~~~ii~~~~~~~~~~~v~i~T-NG~l--------l~--- 74 (298)
+.+....+..+.+..+++.+.+.|+.....|-|--+..++ +.++.+.+ + .+ .+++.+ +... .+
T Consensus 75 ~~GGEP~l~~~~l~~l~~~~~~~~~~i~i~Tng~~~~~~~~~~~l~~~~-~--~v-~isld~~~~~~~~~~~~~~~~~~~ 150 (245)
T 3c8f_A 75 ASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVT-D--LV-MLDLKQMNDEIHQNLVGVSNHRTL 150 (245)
T ss_dssp EEESCGGGGHHHHHHHHHHHHTTTCCEEEEECCCCCCCCHHHHHHHHTC-S--EE-EEECCCSSHHHHHHHHSSCSHHHH
T ss_pred EECCCcCCCHHHHHHHHHHHHHcCCcEEEEeCCCcCcCHHHHHHHHHhC-C--EE-EEeCCCCCHHHhhhccCCCHHHHH
Confidence 3333444566657889999988886533335562211444 33444431 1 23 244444 2111 11
Q ss_pred hhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCC
Q 022377 75 RKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGY 124 (298)
Q Consensus 75 ~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~ 124 (298)
+.++.+.++|+. +.++..-. +.. ..+.+.+.+.++.+.+.|.
T Consensus 151 ~~i~~l~~~g~~-v~i~~~~~-~g~------~~~~~~~~~~~~~~~~~~~ 192 (245)
T 3c8f_A 151 EFAKYLANKNVK-VWIRYVVV-PGW------SDDDDSAHRLGEFTRDMGN 192 (245)
T ss_dssp HHHHHHHHHTCC-EEEEEEEC-TTT------TCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhcCCE-EEEEEeec-CCC------CCCHHHHHHHHHHHHhcCC
Confidence 346677777775 44443221 110 1235677777788888774
No 442
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=22.66 E-value=3.4e+02 Score=22.66 Aligned_cols=101 Identities=15% Similarity=0.223 Sum_probs=59.1
Q ss_pred CCCCHHHHHHHHHHHHh--CCCCEEEEcCCccC-cccc-HHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHH--cCCC
Q 022377 13 QLLSLNEILRLAYLFVT--SGVDKIRLTGGEPT-VRKD-IEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKE--SGLT 86 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~--~~~~~v~~tGGEPl-l~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~--~~~~ 86 (298)
..++.+++..+.+.+.+ .+...+.++|.-|. ...+ +.++++.+++ .+.. +.+..++. .+..+.. ...+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~-~g~~-v~~D~~~~----~l~~~l~~~~~~d 200 (330)
T 2jg1_A 127 PEIDNQEAAGFIKHFEQMMEKVEAVAISGSLPKGLNQDYYAQIIERCQN-KGVP-VILDCSGA----TLQTVLENPYKPT 200 (330)
T ss_dssp CBCCHHHHHHHHHHHHHHGGGCSEEEEESCCCBTSCTTHHHHHHHHHHT-TTCC-EEEECCHH----HHHHHHTSSSCCS
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCCCHHHHHHHHHHHHH-CCCE-EEEECCcH----HHHHHHhccCCce
Confidence 35888888776654422 23467777775443 2234 5588888888 4885 88988863 3344444 2566
Q ss_pred eEEEecCCCCHHhhhhhcCCC---cHHHHHHHHHHHHHcCC
Q 022377 87 SVNISLDTLVPAKFEFLTRRK---GHEKVMESINAAIEVGY 124 (298)
Q Consensus 87 ~v~iSldg~~~~~~~~ir~~~---~~~~v~~~i~~l~~~g~ 124 (298)
.+..+ .+....+.+.. +.+.+.+..+.+.+.|.
T Consensus 201 il~~N-----~~E~~~l~g~~~~~~~~~~~~~~~~l~~~g~ 236 (330)
T 2jg1_A 201 VIKPN-----ISELYQLLNQPLDESLESLKQAVSQPLFEGI 236 (330)
T ss_dssp EECCB-----HHHHHHHTTSCCCCCHHHHHHHHHSGGGTTC
T ss_pred EEEeC-----HHHHHHHhCCCCCCCHHHHHHHHHHHHHcCC
Confidence 44443 22223344432 34566667777777777
No 443
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=22.64 E-value=3.1e+02 Score=22.16 Aligned_cols=117 Identities=15% Similarity=0.163 Sum_probs=68.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc--CCccCcccc------------------HHHHHHHHhccCCCCcEEEEe--Ccc
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLT--GGEPTVRKD------------------IEEACFHLSKLKGLKTLAMTT--NGL 71 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~t--GGEPll~~~------------------~~~ii~~~~~~~~~~~v~i~T--NG~ 71 (298)
..+.+++.+.++.+.+.|+..|.+. -.+|.+... ..++++.+++..++. +.+.+ |.
T Consensus 28 ~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~P-v~~m~~~~~- 105 (262)
T 1rd5_A 28 DPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCP-VVLLSYYKP- 105 (262)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSC-EEEECCSHH-
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC-EEEEecCcH-
Confidence 3456888889999989998877773 245554422 346777777755664 65533 32
Q ss_pred chHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHH
Q 022377 72 TLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELT 149 (298)
Q Consensus 72 ll~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~ 149 (298)
.....++.+.++|.+.|.+. |.+. +.+.+.++.++++|+ .. -..+.+....+.+..+....
T Consensus 106 ~~~~~~~~a~~aGadgv~v~-d~~~-------------~~~~~~~~~~~~~g~-~~--i~~~a~~t~~e~~~~~~~~~ 166 (262)
T 1rd5_A 106 IMFRSLAKMKEAGVHGLIVP-DLPY-------------VAAHSLWSEAKNNNL-EL--VLLTTPAIPEDRMKEITKAS 166 (262)
T ss_dssp HHSCCTHHHHHTTCCEEECT-TCBT-------------TTHHHHHHHHHHTTC-EE--CEEECTTSCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCEEEEc-CCCh-------------hhHHHHHHHHHHcCC-ce--EEEECCCCCHHHHHHHHhcC
Confidence 11223455888999988774 4321 234556667788888 43 23344423344555555443
No 444
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=22.55 E-value=3.1e+02 Score=22.28 Aligned_cols=65 Identities=14% Similarity=0.130 Sum_probs=35.8
Q ss_pred EEEEeCccch-H---hhHHHHHHcCCCeEEEecCCCC-----HHh----hhhhcCCCcHHHHHHHHHHHHHc--CCCCEE
Q 022377 64 LAMTTNGLTL-A---RKLPKLKESGLTSVNISLDTLV-----PAK----FEFLTRRKGHEKVMESINAAIEV--GYNPVK 128 (298)
Q Consensus 64 v~i~TNG~ll-~---~~~~~l~~~~~~~v~iSldg~~-----~~~----~~~ir~~~~~~~v~~~i~~l~~~--g~~~v~ 128 (298)
+...|+|..- + +.++.|.++|.|.|.+.+-..+ +.. ...+..+-+.+++++.++.+++. .+ ++.
T Consensus 20 i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~-Pi~ 98 (262)
T 2ekc_A 20 VSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDI-PFL 98 (262)
T ss_dssp EEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTS-CEE
T ss_pred EEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCC-CEE
Confidence 5566777644 2 2456677777887777663322 111 11233334466667777777665 45 553
Q ss_pred E
Q 022377 129 V 129 (298)
Q Consensus 129 i 129 (298)
+
T Consensus 99 ~ 99 (262)
T 2ekc_A 99 L 99 (262)
T ss_dssp E
T ss_pred E
Confidence 3
No 445
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=22.52 E-value=3.1e+02 Score=23.98 Aligned_cols=96 Identities=11% Similarity=0.067 Sum_probs=63.4
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++ .++++.+.++++..|- ||+-..++..+ +.+++..++ -|.+...+. ...++.+.+.+ ++.|+
T Consensus 213 N~~w~~~~-~~~~~~l~~~~i~~iE----qP~~~~d~~~~-~~l~~~~~i---PIa~dE~~~~~~~~~~~~~~~~~d~v~ 283 (400)
T 3mwc_A 213 NSSFELDQ-WETFKAMDAAKCLFHE----QPLHYEALLDL-KELGERIET---PICLDESLISSRVAEFVAKLGISNIWN 283 (400)
T ss_dssp TTCCCGGG-HHHHHHHGGGCCSCEE----SCSCTTCHHHH-HHHHHHSSS---CEEESTTCCSHHHHHHHHHTTCCSEEE
T ss_pred CCCCCHHH-HHHHHHHHhcCCCEEe----CCCChhhHHHH-HHHHhhCCC---CEEEeCCcCCHHHHHHHHhcCCCCEEE
Confidence 44466777 7788888888877665 79765555443 344443354 356676655 34566666654 67777
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVK 128 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~ 128 (298)
+.+. ..+++..+++.++.+.++|+ ++.
T Consensus 284 ~k~~-----------~~GGit~~~~ia~~A~~~gi-~~~ 310 (400)
T 3mwc_A 284 IKIQ-----------RVGGLLEAIKIYKIATDNGI-KLW 310 (400)
T ss_dssp ECHH-----------HHTSHHHHHHHHHHHHHTTC-EEE
T ss_pred Ecch-----------hhCCHHHHHHHHHHHHHcCC-EEE
Confidence 6642 12568899999999999999 653
No 446
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=22.47 E-value=3.3e+02 Score=22.44 Aligned_cols=122 Identities=15% Similarity=0.053 Sum_probs=67.7
Q ss_pred CCCHHHHHHHHHHHHhC--CCCEEEEcCCccCc-ccc-HHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcCCCeE
Q 022377 14 LLSLNEILRLAYLFVTS--GVDKIRLTGGEPTV-RKD-IEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESGLTSV 88 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~--~~~~v~~tGGEPll-~~~-~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~~~~v 88 (298)
.|+.+++.+.++...+. +...|.=..|--+. ... ...+++.+++. |+. -+. +++.- +..-+.-.+.|+..+
T Consensus 106 ~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~T~~~~~M~~vm~~L~~~-gL~--FlD-S~Ts~~S~a~~~A~~~gvp~~ 181 (261)
T 2qv5_A 106 GDPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLAEQSALEPVMRDIGKR-GLL--FLD-DGSSAQSLSGGIAKAISAPQG 181 (261)
T ss_dssp TSCHHHHHHHHHHHHTTCCCCSEEEEEECTTGGGCHHHHHHHHHHHHHT-TCE--EEE-CSCCTTCCHHHHHHHHTCCEE
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEecccccchhcCHHHHHHHHHHHHHC-CCE--EEc-CCCCcccHHHHHHHHcCCCeE
Confidence 59999999999877663 23455555555555 444 44888888884 773 333 33222 112222344577776
Q ss_pred E--EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHHHhhC
Q 022377 89 N--ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVELTRDR 152 (298)
Q Consensus 89 ~--iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~~~~~ 152 (298)
. |=||... .-+.|+. ...+.++.+++.|. -+.|-. + -.+.+..+.+|+..+
T Consensus 182 ~rdvFLD~~~--~~~~I~~-----qL~~a~~~Ar~~G~-AIaIGh---p--~p~Ti~aL~~~~~~l 234 (261)
T 2qv5_A 182 FADVLLDGEV--TEASILR-----KLDDLERIARRNGQ-AIGVAS---A--FDESIAAISKWSREA 234 (261)
T ss_dssp ECSEETTSSC--SHHHHHH-----HHHHHHHHHHHHSE-EEEEEE---C--CHHHHHHHHHHHHHG
T ss_pred EeeeecCCCC--CHHHHHH-----HHHHHHHHHHhcCc-EEEEeC---C--CHHHHHHHHHHhhhh
Confidence 6 6677532 1222332 44555666677787 444433 2 234555555555543
No 447
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=22.44 E-value=4e+02 Score=25.58 Aligned_cols=81 Identities=11% Similarity=0.127 Sum_probs=55.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcC-Cc--------cCccc-----cHHHHHHHHhccCCCCcEEEE-eCccch----
Q 022377 13 QLLSLNEILRLAYLFVTSGVDKIRLTG-GE--------PTVRK-----DIEEACFHLSKLKGLKTLAMT-TNGLTL---- 73 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~~~~~~~~v~~tG-GE--------Pll~~-----~~~~ii~~~~~~~~~~~v~i~-TNG~ll---- 73 (298)
..++.+.++++|+.+..++...+.++- .. ++.+| ++.+|+++++++ ++. |.-. +-|..+
T Consensus 139 ~~~s~~~ik~~id~ma~~KlN~~h~hl~Ddp~~~~~~wr~~yP~lt~~ei~elv~yA~~r-gI~-vvpeI~Pg~~~~~~~ 216 (716)
T 2cho_A 139 TPWSHQARLSQLKFYGKNKMNTYIYGPKDDPYHSAPNWRLPYPDKEAAQLQELVAVANEN-EVD-FVWAIHPGQDIKWNK 216 (716)
T ss_dssp SCCCHHHHHHHHHHHHHTTCCEEEECCTTCTTTSTTGGGSCCCHHHHHHHHHHHHHHHHT-TCE-EEEEECCTTTCCSSH
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeeccCcccccccccccCChhhHHHHHHHHHHHHHc-CCE-EEEeecccccCCCCH
Confidence 467999999999999998887777642 22 33445 688999999994 885 4311 222211
Q ss_pred ------HhhHHHHHHcCCCeEEEecCCC
Q 022377 74 ------ARKLPKLKESGLTSVNISLDTL 95 (298)
Q Consensus 74 ------~~~~~~l~~~~~~~v~iSldg~ 95 (298)
-..+..+.+.|+..+.|-+|-.
T Consensus 217 ~~~~~l~~k~~~l~~lG~r~~~i~~Dd~ 244 (716)
T 2cho_A 217 EDRDLLLAKFEKMYQLGVRSFAVFFDDI 244 (716)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEECCSC
T ss_pred HHHHHHHHHHHHHHhcCCCeeEEecccC
Confidence 1223445677999999998764
No 448
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=22.32 E-value=2.1e+02 Score=27.03 Aligned_cols=74 Identities=15% Similarity=0.078 Sum_probs=49.6
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCc-------cCccc-c-HHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHc
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGE-------PTVRK-D-IEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKES 83 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGE-------Pll~~-~-~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~ 83 (298)
-++.++...+++.+.+ ++..+.+++|- |...+ . ..++++.+++..++ -+..||-.. .+..+++.+.
T Consensus 240 g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---pvi~~G~i~~~~~a~~~l~~ 315 (690)
T 3k30_A 240 GITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTK---PVVGVGRFTSPDAMVRQIKA 315 (690)
T ss_dssp SCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSS---CEEECSCCCCHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCC---eEEEeCCCCCHHHHHHHHHC
Confidence 4678888888888877 67888888762 22222 1 34677777765444 355666555 5677777776
Q ss_pred C-CCeEEEe
Q 022377 84 G-LTSVNIS 91 (298)
Q Consensus 84 ~-~~~v~iS 91 (298)
+ .|.|.+.
T Consensus 316 g~~d~v~~g 324 (690)
T 3k30_A 316 GILDLIGAA 324 (690)
T ss_dssp TSCSEEEES
T ss_pred CCcceEEEc
Confidence 6 8888876
No 449
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=22.13 E-value=3.9e+02 Score=23.26 Aligned_cols=73 Identities=11% Similarity=0.104 Sum_probs=48.8
Q ss_pred hhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHH----HHHHHH-HcCCCCEEEEEEEecCCCHhHHHHHHHHH
Q 022377 75 RKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVME----SINAAI-EVGYNPVKVNCVVMRGFNDDEICDFVELT 149 (298)
Q Consensus 75 ~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~----~i~~l~-~~g~~~v~i~~vi~~~~n~~~i~~i~~~~ 149 (298)
+.++.+.+.|+.++-+-+ +|..+...+| -+++.+++ +++... +.|+ .+.+-..+.+....++..++++++
T Consensus 100 e~~ed~a~dgV~Y~Eirf---~P~~~~~~~G-l~~~~vv~av~~g~~~a~~~~gi-~~rlI~~~~R~~~~e~a~~~~~~a 174 (380)
T 4gxw_A 100 EYLEDAAAHNVRHAEFFW---NPTGTVRVSG-IPYADAQAAIVTGMRDAARDFGI-GARLIPSIDREQDPDEAVAIVDWM 174 (380)
T ss_dssp HHHHHHHTTTEEEEEEEE---CHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHCC-EEEEEEEEETTSCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEEc---CHHHhccccC-CCHHHHHHHHHHHHHHHHHhcCC-cEEEEEeecCCCCHHHHHHHHHHH
Confidence 456777777888888775 4665544444 34555555 444443 3688 888888888866778888888887
Q ss_pred hhC
Q 022377 150 RDR 152 (298)
Q Consensus 150 ~~~ 152 (298)
...
T Consensus 175 ~~~ 177 (380)
T 4gxw_A 175 KAN 177 (380)
T ss_dssp HHT
T ss_pred HHh
Confidence 653
No 450
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=22.13 E-value=2.4e+02 Score=27.20 Aligned_cols=56 Identities=14% Similarity=0.163 Sum_probs=44.1
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc----C---------CccCcc----cc-HHHHHHHHhccCCCCcEEEEeCcc
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLT----G---------GEPTVR----KD-IEEACFHLSKLKGLKTLAMTTNGL 71 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~t----G---------GEPll~----~~-~~~ii~~~~~~~~~~~v~i~TNG~ 71 (298)
..+.+++.++++.+++.|+..|.+- + |+-... |+ +..+++++++ +|++ +.+-.+..
T Consensus 346 ~~~ee~v~~~ad~~~~~G~~~~viDDGW~~~r~~~~~~~Gd~~~d~~kFP~Glk~lv~~ih~-~Glk-~GlW~~P~ 419 (732)
T 2xn2_A 346 DFNEDKLKTIVDKAKKLGLEMFVLDDGWFGHRDDDNSSLGDWKVYKKKFPNGLGHFADYVHE-QGLK-FGLWFEPE 419 (732)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEECSSSBTTCSSTTSCTTCCSBCTTTCTTCHHHHHHHHHH-TTCE-EEEEECTT
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEcCcccccCCCCccccCceeeCchhcCccHHHHHHHHHH-cCCE-EEEEeCcc
Confidence 6899999999999999999888773 2 444433 33 8899999999 5996 88887753
No 451
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=22.01 E-value=2.8e+02 Score=21.54 Aligned_cols=115 Identities=8% Similarity=0.071 Sum_probs=63.2
Q ss_pred HHHHHhCCCCEEEEcCCccCccc--cHHHHHHHHhccC-CCCcEEEEeCccchHhhHHHHHHcCCCeEEEecCCCCHHhh
Q 022377 24 AYLFVTSGVDKIRLTGGEPTVRK--DIEEACFHLSKLK-GLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKF 100 (298)
Q Consensus 24 i~~~~~~~~~~v~~tGGEPll~~--~~~~ii~~~~~~~-~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSldg~~~~~~ 100 (298)
++.+.+.|...|.+. .+-+.+| .+.++++.+++.. ++. +.+ +... .+.+..+.+.|.+.|.++..+.+....
T Consensus 81 i~~~~~~Gad~v~l~-~~~~~~p~~~~~~~i~~~~~~~~~~~-v~~--~~~t-~~e~~~~~~~G~d~i~~~~~g~t~~~~ 155 (223)
T 1y0e_A 81 VDELIESQCEVIALD-ATLQQRPKETLDELVSYIRTHAPNVE-IMA--DIAT-VEEAKNAARLGFDYIGTTLHGYTSYTQ 155 (223)
T ss_dssp HHHHHHHTCSEEEEE-CSCSCCSSSCHHHHHHHHHHHCTTSE-EEE--ECSS-HHHHHHHHHTTCSEEECTTTTSSTTST
T ss_pred HHHHHhCCCCEEEEe-eecccCcccCHHHHHHHHHHhCCCce-EEe--cCCC-HHHHHHHHHcCCCEEEeCCCcCcCCCC
Confidence 334455677777774 4444444 4668888888742 553 443 2222 334666788899998887766532211
Q ss_pred hhhcCCCcHHHHHHHHHHHHHc-CCCCEEEEEEEecCC-CHhHHHHHHHHHhhCCCee
Q 022377 101 EFLTRRKGHEKVMESINAAIEV-GYNPVKVNCVVMRGF-NDDEICDFVELTRDRPINI 156 (298)
Q Consensus 101 ~~ir~~~~~~~v~~~i~~l~~~-g~~~v~i~~vi~~~~-n~~~i~~i~~~~~~~g~~~ 156 (298)
.......-++.++.+++. ++ + ++..-|. +.+++.++++ .|++.
T Consensus 156 ----~~~~~~~~~~~~~~~~~~~~i-p----via~GGI~~~~~~~~~~~----~Gad~ 200 (223)
T 1y0e_A 156 ----GQLLYQNDFQFLKDVLQSVDA-K----VIAEGNVITPDMYKRVMD----LGVHC 200 (223)
T ss_dssp ----TCCTTHHHHHHHHHHHHHCCS-E----EEEESSCCSHHHHHHHHH----TTCSE
T ss_pred ----CCCCCcccHHHHHHHHhhCCC-C----EEEecCCCCHHHHHHHHH----cCCCE
Confidence 111122335566666654 34 3 3444455 6666666654 46653
No 452
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=21.93 E-value=48 Score=23.24 Aligned_cols=48 Identities=15% Similarity=0.090 Sum_probs=30.4
Q ss_pred cCccccHHHHHHHHhccCCCCcEEEEeCccch--HhhHHHHH-HcCCCeEEEe
Q 022377 42 PTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL--ARKLPKLK-ESGLTSVNIS 91 (298)
Q Consensus 42 Pll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll--~~~~~~l~-~~~~~~v~iS 91 (298)
..+.|+..++++.+++. |+. +.+.||+... ...++.+- ...++.+..|
T Consensus 17 ~~~~~~~~~~l~~L~~~-G~~-~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~ 67 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKN-GVG-TVILSNDPGGLGAAPIRELETNGVVDKVLLS 67 (137)
T ss_dssp HHHHHHHHHHHHHHHHT-TCE-EEEEECSCCGGGGHHHHHHHHTTSSSEEEEH
T ss_pred CccCccHHHHHHHHHHC-CCE-EEEEeCCCHHHHHHHHHHCChHhhccEEEEe
Confidence 33557788999999884 985 9999998654 23444442 2234544443
No 453
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila}
Probab=21.85 E-value=1.3e+02 Score=25.02 Aligned_cols=25 Identities=12% Similarity=0.008 Sum_probs=21.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLT 38 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~t 38 (298)
..+.+++.+.++.+++.|...|.+-
T Consensus 33 ~~~~~~~~~~l~~~~~~G~N~iR~w 57 (387)
T 4awe_A 33 FNDQPDIEKGMTAARAAGLTVFRTW 57 (387)
T ss_dssp GSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEeC
Confidence 3578999999999999999999874
No 454
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=21.85 E-value=3.8e+02 Score=22.99 Aligned_cols=96 Identities=13% Similarity=0.107 Sum_probs=60.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..+- ||+-..++..+.+ +++..++. + .+.-++. ...+..+.+.+ ++.++
T Consensus 196 N~~~~~~~A~~~~~~l~~~~i~~iE----eP~~~~d~~~~~~-l~~~~~ip-I--a~dE~~~~~~~~~~~i~~~a~d~i~ 267 (378)
T 4hpn_A 196 NHGYTVTEAITLGDRAAGFGIDWFE----EPVVPEQLDAYAR-VRAGQPIP-V--AGGETWHGRYGMWQALSAGAVDILQ 267 (378)
T ss_dssp TTCCCHHHHHHHHHHHGGGCCSCEE----CCSCTTCHHHHHH-HHHHSSSC-E--EECTTCCHHHHHHHHHHTTCCSEEC
T ss_pred CcccCHHHHHHHHhhhhhcccchhh----cCCCccchhhhHH-HHhhCCce-e--eCCcCccchHhHHHHHHcCCCCEEe
Confidence 4557888888888888887765553 7887666655444 33333554 4 3443333 23455555544 66555
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPV 127 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v 127 (298)
+.+- ..+++..+++-...+.++|+ ++
T Consensus 268 ~d~~-----------~~GGit~~~~ia~~A~~~gi-~v 293 (378)
T 4hpn_A 268 PDLC-----------GCGGFSEIQKIATLATLHGV-RI 293 (378)
T ss_dssp CBTT-----------TTTHHHHHHHHHHHHHHHTC-EE
T ss_pred eCCe-----------eCCChhHHHHHHHHHHHcCC-eE
Confidence 5442 23568889999999999998 54
No 455
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=21.81 E-value=1.8e+02 Score=23.09 Aligned_cols=76 Identities=13% Similarity=0.096 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhCCCCEEEEc-CCccCcc----c--------cHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHH
Q 022377 17 LNEILRLAYLFVTSGVDKIRLT-GGEPTVR----K--------DIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKE 82 (298)
Q Consensus 17 ~e~~~~~i~~~~~~~~~~v~~t-GGEPll~----~--------~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~ 82 (298)
.+.+.+.++.+..+|...|.+. |.-|-.. . .+.++.+++++ .|+. +.+.+-+... .+..+.+..
T Consensus 75 ~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~gv~-l~lEn~~~~~~~~~~~l~~~ 152 (254)
T 3ayv_A 75 LRRLLFGLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRART-LGVR-LLLENSHEPHPEALRPVLEA 152 (254)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHH-HTCE-EEEECSSCSSGGGTHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhh-cCCE-EEEcCCCCCCHHHHHHHHHh
Confidence 4567788888888998888776 4333221 1 12345555555 3884 8887654222 334444444
Q ss_pred cCCCeEEEecCCC
Q 022377 83 SGLTSVNISLDTL 95 (298)
Q Consensus 83 ~~~~~v~iSldg~ 95 (298)
.+ ..+.+-+|..
T Consensus 153 v~-~~vg~~~D~~ 164 (254)
T 3ayv_A 153 HA-GELGFCFDAA 164 (254)
T ss_dssp HT-TSSEEEEEHH
T ss_pred cC-cCEEEEEEch
Confidence 45 5677777763
No 456
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=21.59 E-value=3.4e+02 Score=22.33 Aligned_cols=115 Identities=18% Similarity=0.141 Sum_probs=62.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcC--CccCcccc------------------HHHHHHHHhccCCCCcEEEEe--Cccc
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLTG--GEPTVRKD------------------IEEACFHLSKLKGLKTLAMTT--NGLT 72 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~tG--GEPll~~~------------------~~~ii~~~~~~~~~~~v~i~T--NG~l 72 (298)
-+.+...+++..+.+. +..|-+.. .+|+.+.. +.++++.+++..++. +.+.+ |..+
T Consensus 27 P~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~P-ii~m~y~n~v~ 104 (271)
T 1ujp_A 27 PSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKP-LFLMTYLNPVL 104 (271)
T ss_dssp SCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSC-EEEECCHHHHH
T ss_pred CChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC-EEEEecCcHHH
Confidence 4556777777777776 66655521 34444322 235666666644564 55533 5322
Q ss_pred h---HhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHHH
Q 022377 73 L---ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVEL 148 (298)
Q Consensus 73 l---~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~~ 148 (298)
. .+.++.+.++|.+.+.+. |.+. +.+.+.++.++++|+ .. -..+.+..+.+.+..+.+.
T Consensus 105 ~~g~~~f~~~~~~aG~dGviv~-Dl~~-------------ee~~~~~~~~~~~gl-~~--i~liap~s~~eri~~ia~~ 166 (271)
T 1ujp_A 105 AWGPERFFGLFKQAGATGVILP-DLPP-------------DEDPGLVRLAQEIGL-ET--VFLLAPTSTDARIATVVRH 166 (271)
T ss_dssp HHCHHHHHHHHHHHTCCEEECT-TCCG-------------GGCHHHHHHHHHHTC-EE--ECEECTTCCHHHHHHHHTT
T ss_pred HhhHHHHHHHHHHcCCCEEEec-CCCH-------------HHHHHHHHHHHHcCC-ce--EEEeCCCCCHHHHHHHHHh
Confidence 1 457788888898865553 5542 233444566777887 32 2344453344555555554
No 457
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=21.47 E-value=1.8e+02 Score=24.06 Aligned_cols=45 Identities=13% Similarity=0.047 Sum_probs=35.0
Q ss_pred CccCccccHHHHHHHHhccCCCCcEEEEeCccc--h-HhhHHHHHHcCCC
Q 022377 40 GEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLT--L-ARKLPKLKESGLT 86 (298)
Q Consensus 40 GEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~l--l-~~~~~~l~~~~~~ 86 (298)
|+..+.|...++++.+++. |+. +.+.||-.- . ......|...|+.
T Consensus 98 ~~~~~~pG~~ell~~L~~~-G~k-i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 98 RQSRAVPGAVEFNNYVNSH-NGK-VFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp TCCEECTTHHHHHHHHHHT-TEE-EEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCCccHHHHHHHHHHC-CCe-EEEEeCCCccchHHHHHHHHHHcCcC
Confidence 5667788999999999994 995 999998764 2 3456777787876
No 458
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=21.33 E-value=51 Score=28.64 Aligned_cols=45 Identities=16% Similarity=0.217 Sum_probs=33.1
Q ss_pred EcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch--HhhHHHHH-HcCC
Q 022377 37 LTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL--ARKLPKLK-ESGL 85 (298)
Q Consensus 37 ~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll--~~~~~~l~-~~~~ 85 (298)
+.|++|+ |...+.++.+++. |+. +.+.||.... .+..++|. ..|+
T Consensus 25 ~~g~~~~--p~a~~~l~~l~~~-g~~-~~~vTNn~~~~~~~~~~~l~~~lgi 72 (352)
T 3kc2_A 25 FRGKKPI--AGASDALKLLNRN-KIP-YILLTNGGGFSERARTEFISSKLDV 72 (352)
T ss_dssp EETTEEC--TTHHHHHHHHHHT-TCC-EEEECSCCSSCHHHHHHHHHHHHTS
T ss_pred EcCCeeC--cCHHHHHHHHHHC-CCE-EEEEeCCCCCCchHHHHHHHHhcCC
Confidence 3467765 6788899999984 996 9999997643 45677777 3566
No 459
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=21.30 E-value=3.3e+02 Score=22.04 Aligned_cols=127 Identities=7% Similarity=0.089 Sum_probs=65.8
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccC-------cccc-HHHHHHHHhccCCCCcEE-EEeCcc----c--------
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPT-------VRKD-IEEACFHLSKLKGLKTLA-MTTNGL----T-------- 72 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPl-------l~~~-~~~ii~~~~~~~~~~~v~-i~TNG~----l-------- 72 (298)
.+++++. ++.+.+.|...|.+...++- ..+. +.++-+.+++. |+. +. +.+.+. +
T Consensus 29 ~~~~~~~---l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gl~-i~~~~~~~~~~~~l~~~d~~~r 103 (295)
T 3cqj_A 29 GECWLER---LQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVET-GVR-VPSMCLSAHRRFPLGSEDDAVR 103 (295)
T ss_dssp CSCHHHH---HHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHH-CCE-EEEEEEGGGGTSCTTCSSHHHH
T ss_pred CCCHHHH---HHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHc-CCe-EEEEecCcccCCCCCCCCHHHH
Confidence 4666665 55666789999999865531 1122 44677777774 886 54 443321 1
Q ss_pred ------hHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHH----HcCCCCEEEEEEEec-CCCHhH
Q 022377 73 ------LARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAI----EVGYNPVKVNCVVMR-GFNDDE 141 (298)
Q Consensus 73 ------l~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~----~~g~~~v~i~~vi~~-~~n~~~ 141 (298)
+.+.++.....|...|.+. +... +........++.+.+.++.+. +.|+ .+.+...-.. ..+.++
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~--~~~~--~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lEn~~~~~~~~~~~ 178 (295)
T 3cqj_A 104 AQGLEIMRKAIQFAQDVGIRVIQLA--GYDV--YYQEANNETRRRFRDGLKESVEMASRAQV-TLAMEIMDYPLMNSISK 178 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEC--CCSC--SSSCCCHHHHHHHHHHHHHHHHHHHHHTC-EEEEECCSSGGGCSHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEC--CCCC--CcCcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEeeCCCcccCCHHH
Confidence 1123444455688887764 3221 000011123666677666554 4577 6665543211 013345
Q ss_pred HHHHHHHHh
Q 022377 142 ICDFVELTR 150 (298)
Q Consensus 142 i~~i~~~~~ 150 (298)
+.++++-+.
T Consensus 179 ~~~l~~~v~ 187 (295)
T 3cqj_A 179 ALGYAHYLN 187 (295)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhcC
Confidence 555555543
No 460
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=21.26 E-value=1.2e+02 Score=26.01 Aligned_cols=55 Identities=9% Similarity=0.087 Sum_probs=39.1
Q ss_pred HhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEE
Q 022377 74 ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCV 132 (298)
Q Consensus 74 ~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~v 132 (298)
.+.++.+++.|+..|.+++.- ..+....+...++.+-+.++.+.++|+ .|.+..-
T Consensus 88 ~~di~~ik~~G~N~VRi~~~~---~~~~~~~~~~~l~~ld~~v~~a~~~Gi-~Vild~H 142 (359)
T 4hty_A 88 KKHFEVIRSWGANVVRVPVHP---RAWKERGVKGYLELLDQVVAWNNELGI-YTILDWH 142 (359)
T ss_dssp HHHHHHHHHTTCSEEEEEECH---HHHHHHHHHHHHHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEeccH---HHhhccCCHHHHHHHHHHHHHHHHCCC-EEEEEcC
Confidence 567889999999999999753 222222122337788888999999999 7776653
No 461
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=21.18 E-value=3.7e+02 Score=22.54 Aligned_cols=72 Identities=19% Similarity=0.156 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccC--CCCcEEEEeCccchHhhHHHHHHcCCCeEEEec
Q 022377 16 SLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLK--GLKTLAMTTNGLTLARKLPKLKESGLTSVNISL 92 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~--~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSl 92 (298)
...++.+.......+|..-|.+-++- ++-..++++.+++.. ++. + +.--|....+.++++.++|.+.|.|.=
T Consensus 184 e~A~~~aYa~~gad~G~~lV~LD~~~---~~v~~e~V~~I~~~~~~~iP-V-~vGGGIrs~Eda~~ll~aGAD~VVVGS 257 (286)
T 3vk5_A 184 STEEIDRYLHVARAFGFHMVYLYSRN---EHVPPEVVRHFRKGLGPDQV-L-FVSGNVRSGRQVTEYLDSGADYVGFAG 257 (286)
T ss_dssp SSHHHHHHHHHHHHTTCSEEEEECSS---SCCCHHHHHHHHHHSCTTCE-E-EEESSCCSHHHHHHHHHTTCSEEEESG
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCCC---CcCCHHHHHHHHHhcCCCCC-E-EEEeCCCCHHHHHHHHHcCCCEEEECc
Confidence 33333555556566787888876543 444456777766644 443 3 445676667889999999999999873
No 462
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=21.14 E-value=1.9e+02 Score=25.30 Aligned_cols=60 Identities=15% Similarity=0.224 Sum_probs=41.7
Q ss_pred HhhHHHHHHcCCCeEEEec-------CCCCHHhhhhhc-CC-CcHHHHHHHHHHHHHcCCCCEEEEEEEe
Q 022377 74 ARKLPKLKESGLTSVNISL-------DTLVPAKFEFLT-RR-KGHEKVMESINAAIEVGYNPVKVNCVVM 134 (298)
Q Consensus 74 ~~~~~~l~~~~~~~v~iSl-------dg~~~~~~~~ir-~~-~~~~~v~~~i~~l~~~g~~~v~i~~vi~ 134 (298)
.+.+..|++.|++.|.++= .|.++.-|..+. .. ++.+...+-++.+++.|+ .|.+-.|+.
T Consensus 24 ~~~ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi-~VilD~V~N 92 (405)
T 1ht6_A 24 MGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGV-QAIADIVIN 92 (405)
T ss_dssp HTTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTC-EEEEEECCS
T ss_pred HHHHHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCC-EEEEEECcC
Confidence 4567788888888887762 333333333443 32 458888889999999999 888887765
No 463
>1yqh_A DUF77, IG hypothetical 16092; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Bacillus cereus atcc 14579} SCOP: d.58.48.1
Probab=21.10 E-value=2.1e+02 Score=20.06 Aligned_cols=55 Identities=15% Similarity=0.139 Sum_probs=35.7
Q ss_pred cCCccCccccHHHHHHHHhccCCCCcEEEEeCccchH----hh-------HHHHHHcCCCeEEEecCC
Q 022377 38 TGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLA----RK-------LPKLKESGLTSVNISLDT 94 (298)
Q Consensus 38 tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~----~~-------~~~l~~~~~~~v~iSldg 94 (298)
.|+++-+.+.+.++++.+++ .|+. ..++.-|+.+. +. .+.+.+.|..+|...+.-
T Consensus 17 lg~~~svs~~Va~~i~vl~~-sGl~-y~~~pmgT~IEGe~devm~vv~~~~e~~~~~G~~RV~t~iKI 82 (109)
T 1yqh_A 17 QAKTKDVYSVVDKAIEVVQQ-SGVR-YEVGAMETTLEGELDVLLDVVKRAQQACVDAGAEEVITSIKI 82 (109)
T ss_dssp ECSSSCHHHHHHHHHHHHHH-SCSE-EEECSSCEEEEECHHHHHHHHHHHHHHHHHTTCSEEEEEEEE
T ss_pred CCCCCcHHHHHHHHHHHHHH-cCCC-eEecCCccEEEcCHHHHHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence 36556677777889998887 5985 77777777652 21 233445577766655543
No 464
>2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A*
Probab=20.92 E-value=1.8e+02 Score=26.20 Aligned_cols=54 Identities=9% Similarity=0.025 Sum_probs=37.9
Q ss_pred HhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCc---HHHHHHHHHHHHHcCCCCEEEEE
Q 022377 74 ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKG---HEKVMESINAAIEVGYNPVKVNC 131 (298)
Q Consensus 74 ~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~---~~~v~~~i~~l~~~g~~~v~i~~ 131 (298)
.+.++.+++.|++.+.+|+ +. +...-. .|.-+ .+-.-+.|+.|++.|+ .+.+.+
T Consensus 70 ~eDi~lm~~~G~~~~R~si-sW-sRi~P~-~g~~n~~Gl~~y~~lid~l~~~GI-~p~vtL 126 (454)
T 2o9p_A 70 KEDVQLMKQLGFLHYRFSV-AW-PRIMPA-AGIINEEGLLFYEHLLDEIELAGL-IPMLTL 126 (454)
T ss_dssp HHHHHHHHTTTCCEEEEEC-CH-HHHCSS-TTCCCHHHHHHHHHHHHHHHHHTC-EEEEEE
T ss_pred HHHHHHHHhcCCceEEecc-cH-HhhCCC-CCCcCHHHHHHHHHHHHHHHHCCC-EEEEEe
Confidence 5779999999999999999 43 233322 34334 3667778889999999 554433
No 465
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=20.92 E-value=3.6e+02 Score=22.38 Aligned_cols=91 Identities=15% Similarity=0.171 Sum_probs=53.2
Q ss_pred CCCcEEEEeCccc-------hH------hhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCC
Q 022377 60 GLKTLAMTTNGLT-------LA------RKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNP 126 (298)
Q Consensus 60 ~~~~v~i~TNG~l-------l~------~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~ 126 (298)
.++ +++.|.... +. +.++.+.+.|++.|.++.+.......+ .+...+-+.-+.+.++|+ .
T Consensus 8 ~mk-lg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~-----~~~~~~~~l~~~l~~~gL-~ 80 (335)
T 2qw5_A 8 TSD-IYISFFMFTTNLQPDNLDYRRIVVAHIKKLQRFGYSGFEFPIAPGLPENYA-----QDLENYTNLRHYLDSEGL-E 80 (335)
T ss_dssp CCC-EEEEGGGTCSCCCTTCHHHHHHHHHHHHHHHHTTCCEEEEECCCCCGGGHH-----HHHHHHHHHHHHHHHTTC-T
T ss_pred hcc-eeEEEeeecCCCChhhhhccchHHHHHHHHHHhCCCEEEEecCCCcccccc-----cchHHHHHHHHHHHHCCC-C
Confidence 454 788776631 23 678889999999999998754321000 011233334445567898 5
Q ss_pred ---EEEEEEEecCCC------------HhHHHHHHHHHhhCCCeeE
Q 022377 127 ---VKVNCVVMRGFN------------DDEICDFVELTRDRPINIR 157 (298)
Q Consensus 127 ---v~i~~vi~~~~n------------~~~i~~i~~~~~~~g~~~~ 157 (298)
+...+-+.++.| .+.+...++++..+|++..
T Consensus 81 ~~~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v 126 (335)
T 2qw5_A 81 NVKISTNVGATRTFDPSSNYPEQRQEALEYLKSRVDITAALGGEIM 126 (335)
T ss_dssp TCEEEEECCCCSSSCTTCSSHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred cceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 433111111112 1457888999999998643
No 466
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=20.91 E-value=1.8e+02 Score=24.74 Aligned_cols=64 Identities=16% Similarity=0.198 Sum_probs=45.1
Q ss_pred CCCcEEEEeCccchHhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEE
Q 022377 60 GLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVV 133 (298)
Q Consensus 60 ~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi 133 (298)
|.+ + -+.||.. .+.++.+++.|+..|.+.+- .+|. .+..+++.+++.++.++++|+ .|-+.+-.
T Consensus 19 g~~-~-~~~~G~~-~~~~~ilk~~G~n~vRlri~-v~P~-----~g~~d~~~~~~~~~~ak~~Gl-~v~ld~hy 82 (334)
T 1fob_A 19 GYS-Y-KNLNGQT-QALETILADAGINSIRQRVW-VNPS-----DGSYDLDYNLELAKRVKAAGM-SLYLDLHL 82 (334)
T ss_dssp TCC-C-BCTTSCB-CCHHHHHHHHTCCEEEEEEC-SCCT-----TCTTCHHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CCE-E-ECCCCCC-chHHHHHHHcCCCEEEEEEE-ECCC-----CCccCHHHHHHHHHHHHHCCC-EEEEEecc
Confidence 654 3 2345643 35678888899999999774 2333 233459999999999999999 88777543
No 467
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=20.89 E-value=4.3e+02 Score=23.26 Aligned_cols=80 Identities=15% Similarity=0.184 Sum_probs=58.5
Q ss_pred CCCCHHHHHHHHHHH-----HhCCCCEEEEc-C---------CccCcc----cc-HHHHHHHHhccCCCCcEEEEeCc-c
Q 022377 13 QLLSLNEILRLAYLF-----VTSGVDKIRLT-G---------GEPTVR----KD-IEEACFHLSKLKGLKTLAMTTNG-L 71 (298)
Q Consensus 13 ~~l~~e~~~~~i~~~-----~~~~~~~v~~t-G---------GEPll~----~~-~~~ii~~~~~~~~~~~v~i~TNG-~ 71 (298)
..++.+.+.+.++.+ +++|+..|.+= | |..... |+ +..+++++++ +|++ +.|-+.. .
T Consensus 24 ~~~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~~d~~G~~~~~~~kFP~Gl~~l~~~i~~-~Glk-~Giw~~~g~ 101 (417)
T 1szn_A 24 CDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVDGHIAPNATRFPDGIDGLAKKVHA-LGLK-LGIYSTAGT 101 (417)
T ss_dssp TCCCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCBTTBCCBCTTTCTTHHHHHHHHHHH-TTCE-EEEEEESSS
T ss_pred cCCCHHHHHHHHHHHHHcCchhhCCCEEEECCCccCCCCCCCCCEEECcccCCcCHHHHHHHHHH-cCCE-EEEEeCCCC
Confidence 358999999999999 77788888873 2 444444 33 7899999999 4996 8876542 2
Q ss_pred -----------chHhhHHHHHHcCCCeEEEecCC
Q 022377 72 -----------TLARKLPKLKESGLTSVNISLDT 94 (298)
Q Consensus 72 -----------ll~~~~~~l~~~~~~~v~iSldg 94 (298)
......+.+.+.|+++|-+..-+
T Consensus 102 ~~c~~~Pgs~~~~~~d~~~~~~wGvdylK~D~~~ 135 (417)
T 1szn_A 102 ATCAGYPASLGYEDVDAADFADWGVDYLKYDNCN 135 (417)
T ss_dssp BCTTSCBCCTTCHHHHHHHHHHTTCCEEEEECCC
T ss_pred chhccCcchHhHHHHHHHHHHHcCCCEEEECCCC
Confidence 12234778888999999988764
No 468
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=20.86 E-value=3.4e+02 Score=22.11 Aligned_cols=133 Identities=16% Similarity=0.151 Sum_probs=61.9
Q ss_pred CHHHHHHHHHHHHhCCCCEEEE--c-CCccCccccHHHHHHHHhccC-CCCcEEEEeC------ccc-h-H-hh---HHH
Q 022377 16 SLNEILRLAYLFVTSGVDKIRL--T-GGEPTVRKDIEEACFHLSKLK-GLKTLAMTTN------GLT-L-A-RK---LPK 79 (298)
Q Consensus 16 ~~e~~~~~i~~~~~~~~~~v~~--t-GGEPll~~~~~~ii~~~~~~~-~~~~v~i~TN------G~l-l-~-~~---~~~ 79 (298)
+.+++.+-++++...++.-|-| = =-++--..++.+.+..+++.. ++. + |.|. |.. . + +. +..
T Consensus 30 t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lP-i-I~T~Rt~~EGG~~~~~~~~~~~ll~~ 107 (258)
T 4h3d_A 30 NKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIP-L-LFTFRSVVEGGEKLISRDYYTTLNKE 107 (258)
T ss_dssp SHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSC-E-EEECCCGGGTCSCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCC-E-EEEEechhhCCCCCCCHHHHHHHHHH
Confidence 5566666666666666554333 1 111111123445666665532 343 3 3333 211 1 1 12 334
Q ss_pred HHHcC-CCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecC-CCHhHHHHHHHHHhhCCCeeE
Q 022377 80 LKESG-LTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRG-FNDDEICDFVELTRDRPINIR 157 (298)
Q Consensus 80 l~~~~-~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~-~n~~~i~~i~~~~~~~g~~~~ 157 (298)
+...+ ++.|-|-+... ++ .+-+-++..++.+. .+-++.--..+ ...+++.+.+.-+.+.|.++.
T Consensus 108 ~~~~~~~d~iDvEl~~~-~~------------~~~~l~~~a~~~~~-kiI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIv 173 (258)
T 4h3d_A 108 ISNTGLVDLIDVELFMG-DE------------VIDEVVNFAHKKEV-KVIISNHDFNKTPKKEEIVSRLCRMQELGADLP 173 (258)
T ss_dssp HHHTTCCSEEEEEGGGC-HH------------HHHHHHHHHHHTTC-EEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred HHhcCCchhhHHhhhcc-HH------------HHHHHHHHHHhCCC-EEEEEEecCCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 44444 67777776553 22 11122333445555 55444422211 234667777777777777655
Q ss_pred EEeeecC
Q 022377 158 FIEFMPF 164 (298)
Q Consensus 158 ~~~~~p~ 164 (298)
-+..+|.
T Consensus 174 Kia~~~~ 180 (258)
T 4h3d_A 174 KIAVMPQ 180 (258)
T ss_dssp EEEECCS
T ss_pred EEEEccC
Confidence 5545543
No 469
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=20.86 E-value=3.5e+02 Score=23.82 Aligned_cols=73 Identities=11% Similarity=0.042 Sum_probs=50.8
Q ss_pred CCCCcEEEEeCccch-HhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEe
Q 022377 59 KGLKTLAMTTNGLTL-ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVM 134 (298)
Q Consensus 59 ~~~~~v~i~TNG~ll-~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~ 134 (298)
.++. +....|...+ ++....++..++..+.+- ....-+....-+|.-+|..+-+.++.+.+.|+ .|...+.+.
T Consensus 12 ~~~~-~G~a~~~~~~~~~~~~~~~~~~fn~~t~e-n~~kw~~~ep~~g~~~f~~~D~~~~~a~~~gi-~v~ghtlvW 85 (436)
T 2d1z_A 12 SGRY-FGTAIASGKLGDSAYTTIASREFNMVTAE-NEMKIDATEPQRGQFNFSAGDRVYNWAVQNGK-QVRGHTLAW 85 (436)
T ss_dssp TTCE-EEEEECGGGTTCHHHHHHHHHHCSEEEES-STTSHHHHCSBTTBCCCHHHHHHHHHHHHTTC-EEEEEEEEC
T ss_pred cCCE-EEEEeChhhcCCHHHHHHHHHhCCeeeec-cccccccccCCCCccChHHHHHHHHHHHHCCC-EEEEEEEEe
Confidence 4774 8888888777 456778888889988774 12223333333444568888888999999999 887777644
No 470
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=20.84 E-value=3e+02 Score=21.33 Aligned_cols=77 Identities=9% Similarity=0.139 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEc---CC-ccCccccHHHHHHHHhccCCCC-cEEEEeCccchHhhHHHHHHcCCCeEE
Q 022377 15 LSLNEILRLAYLFVTSGVDKIRLT---GG-EPTVRKDIEEACFHLSKLKGLK-TLAMTTNGLTLARKLPKLKESGLTSVN 89 (298)
Q Consensus 15 l~~e~~~~~i~~~~~~~~~~v~~t---GG-EPll~~~~~~ii~~~~~~~~~~-~v~i~TNG~ll~~~~~~l~~~~~~~v~ 89 (298)
+++..+.+.++.+.+.|...+.+- |- .|.+... .++++.+++..+.. .+.+-.|- ..+.++.+.++|.+.|+
T Consensus 13 ~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g-~~~i~~i~~~~~~~~~v~l~v~d--~~~~i~~~~~~gad~v~ 89 (220)
T 2fli_A 13 ADYANFASELARIEETDAEYVHIDIMDGQFVPNISFG-ADVVASMRKHSKLVFDCHLMVVD--PERYVEAFAQAGADIMT 89 (220)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBC-HHHHHHHHTTCCSEEEEEEESSS--GGGGHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeecCCCCCccccC-HHHHHHHHHhCCCCEEEEEeecC--HHHHHHHHHHcCCCEEE
Confidence 344566677777778887765443 44 4544422 45666666533332 13333332 13467889999999999
Q ss_pred EecCC
Q 022377 90 ISLDT 94 (298)
Q Consensus 90 iSldg 94 (298)
+....
T Consensus 90 vh~~~ 94 (220)
T 2fli_A 90 IHTES 94 (220)
T ss_dssp EEGGG
T ss_pred EccCc
Confidence 88654
No 471
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=20.82 E-value=1.3e+02 Score=26.18 Aligned_cols=79 Identities=16% Similarity=0.141 Sum_probs=50.0
Q ss_pred CCCHHHHHHHHHHHHhCC-CCEEEEc---------CCccCccccHH-HHHHHHhcc-----CCCCcEEEEeCccch-Hhh
Q 022377 14 LLSLNEILRLAYLFVTSG-VDKIRLT---------GGEPTVRKDIE-EACFHLSKL-----KGLKTLAMTTNGLTL-ARK 76 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~-~~~v~~t---------GGEPll~~~~~-~ii~~~~~~-----~~~~~v~i~TNG~ll-~~~ 76 (298)
.-++|+..++++++..-+ ...+..+ .|+|-|++++. ++-+++++. .++. +.+ --|+-+ ++.
T Consensus 196 yT~Peea~~fv~~ttgvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~g~~~~~vp-LVl-HGgSG~~~e~ 273 (358)
T 1dos_A 196 YTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKAGNVVLTPTILRDSQEYVSKKHNLPHNSLN-FVF-HGGSGSTAQE 273 (358)
T ss_dssp SCCHHHHHHHHHHHHTTCSCEEEECCSSCCCSSCCCSCCCCCTHHHHHHHHHHHHHHTCCTTCSC-EEE-CSCTTCCHHH
T ss_pred cCCHHHHHHHHHHhcCCChhceEEEecccccCccCCCCCCcCHHHHHHHHHHHHHHhCCCCCCCc-EEE-eCCCCCCHHH
Confidence 367999999988753322 1133332 37899999966 554544432 1343 322 334445 678
Q ss_pred HHHHHHcCCCeEEEecCC
Q 022377 77 LPKLKESGLTSVNISLDT 94 (298)
Q Consensus 77 ~~~l~~~~~~~v~iSldg 94 (298)
+++.+..|+..|+|+-|.
T Consensus 274 i~~ai~~GV~KiNi~Tdl 291 (358)
T 1dos_A 274 IKDSVSYGVVKMNIDTDT 291 (358)
T ss_dssp HHHHHHTTEEEEEECHHH
T ss_pred HHHHHHCCCeEEEEcHHH
Confidence 999999999999998654
No 472
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=20.76 E-value=3.2e+02 Score=21.68 Aligned_cols=115 Identities=14% Similarity=0.072 Sum_probs=68.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEc--CCccCcccc------------------HHHHHHHHhccCCCCcEEEEe--Ccc
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLT--GGEPTVRKD------------------IEEACFHLSKLKGLKTLAMTT--NGL 71 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~t--GGEPll~~~------------------~~~ii~~~~~~~~~~~v~i~T--NG~ 71 (298)
..+.+++.+.++.+.+. +..|.+. -.+|.+... ..++++.+++..++. +.+-+ |..
T Consensus 15 ~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~p-v~~~~~~~~~ 92 (248)
T 1geq_A 15 DPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTP-IVLMTYYNPI 92 (248)
T ss_dssp SSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCC-EEEEECHHHH
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCC-EEEEeccchh
Confidence 34557888888888777 7766665 466776432 357888888755664 66655 542
Q ss_pred ch---HhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEecCCCHhHHHHHHH
Q 022377 72 TL---ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVMRGFNDDEICDFVE 147 (298)
Q Consensus 72 ll---~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~~~~n~~~i~~i~~ 147 (298)
+. .+.++.+.++|.+.|.+. +-+ .+ ...+.++.++++|. .+.+ .+.+....+.+..+.+
T Consensus 93 ~~~~~~~~~~~~~~~Gad~v~~~-~~~-~~------------~~~~~~~~~~~~g~-~~~~--~i~~~t~~e~~~~~~~ 154 (248)
T 1geq_A 93 YRAGVRNFLAEAKASGVDGILVV-DLP-VF------------HAKEFTEIAREEGI-KTVF--LAAPNTPDERLKVIDD 154 (248)
T ss_dssp HHHCHHHHHHHHHHHTCCEEEET-TCC-GG------------GHHHHHHHHHHHTC-EEEE--EECTTCCHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHCCCCEEEEC-CCC-hh------------hHHHHHHHHHHhCC-CeEE--EECCCCHHHHHHHHHh
Confidence 21 467899999999988885 221 11 12344566667787 5433 3444222333444443
No 473
>2jxf_A NS4B(40-69), genome polyprotein; membrane associated segment, acetylation, apoptosis, ATP- binding, capsid protein, cytoplasm, endoplasmic reticulum; NMR {Synthetic}
Probab=20.69 E-value=79 Score=16.45 Aligned_cols=15 Identities=7% Similarity=-0.084 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHhhh
Q 022377 262 DELREIIGAAVKRKK 276 (298)
Q Consensus 262 ~~~~~~~~~~~~~~~ 276 (298)
.++.++|.+++|+--
T Consensus 5 ~kle~fW~khMwNfv 19 (30)
T 2jxf_A 5 QKLEVFWAKHMWNFI 19 (30)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 578999999998743
No 474
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=20.50 E-value=4.1e+02 Score=22.79 Aligned_cols=97 Identities=14% Similarity=0.053 Sum_probs=63.1
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCeEE
Q 022377 12 PQLLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTSVN 89 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~v~ 89 (298)
+.-.+.++..++++.+.++++..|- ||+-..++..+ +.+++..++. |.+..... .+.++.+.+.+ ++.|+
T Consensus 193 n~~~~~~~a~~~~~~l~~~~i~~iE----qP~~~~d~~~~-~~l~~~~~iP---Ia~dE~~~~~~~~~~~i~~~~~d~v~ 264 (367)
T 3dg3_A 193 NRGWSAAESLRAMREMADLDLLFAE----ELCPADDVLSR-RRLVGQLDMP---FIADESVPTPADVTREVLGGSATAIS 264 (367)
T ss_dssp TTCSCHHHHHHHHHHTTTSCCSCEE----SCSCTTSHHHH-HHHHHHCSSC---EEECTTCSSHHHHHHHHHHTSCSEEE
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEE----CCCCcccHHHH-HHHHHhCCCC---EEecCCcCCHHHHHHHHHcCCCCEEE
Confidence 4557888888888888888877665 88765555443 4454433553 55666655 34566655544 77777
Q ss_pred EecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEE
Q 022377 90 ISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKV 129 (298)
Q Consensus 90 iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i 129 (298)
+.+ . +. ++...++....+.++|+ ++.+
T Consensus 265 ~k~-----~---~~----Git~~~~ia~~A~~~gi-~~~~ 291 (367)
T 3dg3_A 265 IKT-----A---RT----GFTGSTRVHHLAEGLGL-DMVM 291 (367)
T ss_dssp ECH-----H---HH----TTHHHHHHHHHHHHHTC-EEEE
T ss_pred eeh-----h---hh----hHHHHHHHHHHHHHcCC-eEEE
Confidence 653 1 22 35677888888889999 6543
No 475
>1y51_A Phosphocarrier protein HPR; bacillus stearothermophilus HPR F29W mutant, transport protein; 1.65A {Geobacillus stearothermophilus} PDB: 1y50_A 1y4y_A 2nzu_L* 1rzr_T* 2nzv_L* 2oen_L* 2fep_S* 3oqm_S* 3oqn_S* 3oqo_S*
Probab=20.44 E-value=2e+02 Score=19.14 Aligned_cols=61 Identities=15% Similarity=0.214 Sum_probs=40.9
Q ss_pred HHHHHHHHhccCCCCcEEEEeCccchH-hhHHHHHHcCC---CeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHc
Q 022377 48 IEEACFHLSKLKGLKTLAMTTNGLTLA-RKLPKLKESGL---TSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEV 122 (298)
Q Consensus 48 ~~~ii~~~~~~~~~~~v~i~TNG~ll~-~~~~~l~~~~~---~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~ 122 (298)
...+++.+.+ .+. .+.+..++...+ +.+-.+...++ +.|.|+.+|.+++ .+++.|..+.+.
T Consensus 19 Aa~~v~~a~~-f~s-~I~i~~~~~~vdaKSim~lm~L~~~~g~~i~i~~~G~De~------------~A~~~l~~l~~~ 83 (88)
T 1y51_A 19 ATILVQTASK-WNS-EIQLEYNGKTVNLKSIMGVMSLGIPKGATIKITAEGADAA------------EAMAALTDTLAK 83 (88)
T ss_dssp HHHHHHHHHT-SSS-EEEEEETTEEEETTCHHHHHHTCCCTTCEEEEEEESTTHH------------HHHHHHHHHHHH
T ss_pred HHHHHHHHhh-CCC-eEEEEECCEEEehHhHHHHHhcCCCCCCEEEEEEeCCCHH------------HHHHHHHHHHHh
Confidence 4577777777 466 488888776663 55666665554 6699999997654 556666666553
No 476
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=20.33 E-value=4.2e+02 Score=22.95 Aligned_cols=97 Identities=15% Similarity=0.173 Sum_probs=65.1
Q ss_pred CCCCCHHHHHHHHHHHHhCCC--CEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccch-HhhHHHHHHcC-CCe
Q 022377 12 PQLLSLNEILRLAYLFVTSGV--DKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTL-ARKLPKLKESG-LTS 87 (298)
Q Consensus 12 ~~~l~~e~~~~~i~~~~~~~~--~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll-~~~~~~l~~~~-~~~ 87 (298)
+.-.+.++..++++.+.++++ ..|- ||+-..++.. ++.+++..++. + ..... .+.++++.+.+ ++.
T Consensus 195 n~~~~~~~A~~~~~~l~~~~i~~~~iE----qP~~~~d~~~-~~~l~~~~~iP-I----dE~~~~~~~~~~~~~~~~~d~ 264 (391)
T 3gd6_A 195 SHLLNWKDAHRAIKRLTKYDLGLEMIE----SPAPRNDFDG-LYQLRLKTDYP-I----SEHVWSFKQQQEMIKKDAIDI 264 (391)
T ss_dssp TTCSCHHHHHHHHHHHTTCCSSCCEEE----CCSCTTCHHH-HHHHHHHCSSC-E----EEECCCHHHHHHHHHHTCCSE
T ss_pred CCCcCHHHHHHHHHHHHhcCCCcceec----CCCChhhHHH-HHHHHHHcCCC-c----CCCCCCHHHHHHHHHcCCCCE
Confidence 455789999999999998887 6776 8986555443 44455544664 5 44443 34566665544 777
Q ss_pred EEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEE
Q 022377 88 VNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 130 (298)
Q Consensus 88 v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 130 (298)
|++.+.- -+++...++....+.++|+ ++.+.
T Consensus 265 v~~k~~~-----------~GGit~~~~ia~~A~~~gi-~~~~~ 295 (391)
T 3gd6_A 265 FNISPVF-----------IGGLTSAKKAAYAAEVASK-DVVLG 295 (391)
T ss_dssp EEECHHH-----------HTSHHHHHHHHHHHHHTTC-EEEEC
T ss_pred EEECchh-----------cCCHHHHHHHHHHHHHcCC-EEEec
Confidence 7766421 2568889999999999999 65443
No 477
>3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans}
Probab=20.33 E-value=2.4e+02 Score=25.41 Aligned_cols=55 Identities=16% Similarity=0.138 Sum_probs=38.3
Q ss_pred HhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCc---HHHHHHHHHHHHHcCCCCEEEEE
Q 022377 74 ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKG---HEKVMESINAAIEVGYNPVKVNC 131 (298)
Q Consensus 74 ~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~---~~~v~~~i~~l~~~g~~~v~i~~ 131 (298)
.+.++.+++.|++.+.+|+ +. +...-.=.|.-+ ++-.-+.|+.|++.|+ .+.+.+
T Consensus 62 ~eDi~lm~~~G~~~~R~si-~W-sri~P~G~g~~n~~G~~~y~~lid~l~~~GI-~p~vtL 119 (453)
T 3ahx_A 62 KEDVQLLKSLGIKSYRFSI-AW-PRIFPKGFGEINQKGIQFYRDLIDELIKNDI-EPAITI 119 (453)
T ss_dssp HHHHHHHHHTTCCEEEEEC-CH-HHHCTTSSSSCCHHHHHHHHHHHHHHHHTTC-EEEEEE
T ss_pred HHHHHHHHHhCCCeEeccc-CH-HHhccCCCCCcCHHHHHHHHHHHHHHHHCCC-EEEEEe
Confidence 5779999999999999999 33 222211123223 7788888999999999 554433
No 478
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=20.29 E-value=4e+02 Score=24.19 Aligned_cols=79 Identities=13% Similarity=0.046 Sum_probs=57.8
Q ss_pred CCCHHHHHHHHHHHHh-----CCCCEEEEc---------CCccCcc----cc-HHHHHHHHhccCCCCcEEEEeCc----
Q 022377 14 LLSLNEILRLAYLFVT-----SGVDKIRLT---------GGEPTVR----KD-IEEACFHLSKLKGLKTLAMTTNG---- 70 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~-----~~~~~v~~t---------GGEPll~----~~-~~~ii~~~~~~~~~~~v~i~TNG---- 70 (298)
.++.+.+.+.++.+.+ +|...|.+= -|..... |+ +..+++++++ +|++ +.|-+..
T Consensus 43 ~i~e~~i~~~Ad~~~~~Gl~~~GyeyvvIDDGW~~~rd~~G~~~~d~~kFP~Glk~Lad~ih~-~GlK-fGIw~~pG~~t 120 (479)
T 3lrk_A 43 DVSEQLLLDTADRISDLGLKDMGYKYIILDDCWSSGRDSDGFLVADEQKFPNGMGHVADHLHN-NSFL-FGMYSSAGEYT 120 (479)
T ss_dssp CCCHHHHHHHHHHHHHTTCGGGTCCEEECCSSCEEEECTTSCEEECTTTCTTCHHHHHHHHHH-TTCE-EEEEEESSSBC
T ss_pred CCCHHHHHHHHHHHHhcCccccCceEEEECCccccccCCCCCEecChhhcCCCHHHHHHHHHH-CCCe-eEEEecCcccc
Confidence 5889999999999988 466777763 1554443 33 8899999999 4996 9887654
Q ss_pred ------cch--HhhHHHHHHcCCCeEEEecCC
Q 022377 71 ------LTL--ARKLPKLKESGLTSVNISLDT 94 (298)
Q Consensus 71 ------~ll--~~~~~~l~~~~~~~v~iSldg 94 (298)
++- +..++.+.+-|+++|-+..-.
T Consensus 121 C~~~pGsl~~~~~da~~fa~WGVDylK~D~c~ 152 (479)
T 3lrk_A 121 CAGYPGSLGREEEDAQFFANNRVDYLKYDNCY 152 (479)
T ss_dssp TTSSBCCTTCHHHHHHHHHHTTCCEEEEECTT
T ss_pred ccCCCchhHHHHHHHHHHHHhCCcEEEEccCC
Confidence 221 345788899999998876543
No 479
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A*
Probab=20.28 E-value=3.1e+02 Score=22.92 Aligned_cols=73 Identities=11% Similarity=0.034 Sum_probs=49.6
Q ss_pred CCCCcEEEEeCccch-HhhHHHHHHcCCCeEEEecCCCCHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEEEEEe
Q 022377 59 KGLKTLAMTTNGLTL-ARKLPKLKESGLTSVNISLDTLVPAKFEFLTRRKGHEKVMESINAAIEVGYNPVKVNCVVM 134 (298)
Q Consensus 59 ~~~~~v~i~TNG~ll-~~~~~~l~~~~~~~v~iSldg~~~~~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~~vi~ 134 (298)
.++. ++..+|...+ +.....+...+++.+.+- ....-.....-+|.-+|..+-+.++.+.+.|+ .|...+.+.
T Consensus 11 ~~~~-~G~a~~~~~~~~~~~~~~~~~~fn~~t~e-n~~kW~~~ep~~g~~~~~~~D~~~~~a~~~gi-~v~ghtl~W 84 (315)
T 3cui_A 11 AGRD-FGFALDPNRLSEAQYKAIADSEFNLVVAE-NAMKWDATEPSQNSFSFGAGDRVASYAADTGK-ELYGHTLVW 84 (315)
T ss_dssp HTCE-EEEEECGGGGGSHHHHHHHHHHCSEEEES-STTSHHHHCSBTTBCCCHHHHHHHHHHHHHTC-EEEEEEEEE
T ss_pred cCCe-EEEEcChhhcCCHHHHHHHHhcCCEEEEC-CcccHHHhCCCCCcCChHHHHHHHHHHHHCCC-EEEEEeeec
Confidence 3674 8888888777 456778888889988873 11122222233344458888888999999999 887776643
No 480
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=20.15 E-value=3e+02 Score=21.19 Aligned_cols=71 Identities=14% Similarity=0.170 Sum_probs=44.8
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCccCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEE
Q 022377 14 LLSLNEILRLAYLFVTSGVDKIRLTGGEPTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVN 89 (298)
Q Consensus 14 ~l~~e~~~~~i~~~~~~~~~~v~~tGGEPll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~ 89 (298)
..+.+++.+.++.+.+.|+..|.+.-..| +..+.++.+.+..+.. +.+--.+....+.++...+.|.+.|.
T Consensus 15 ~~d~~~~~~~~~~~~~~G~~~i~l~~~~~----~~~~~i~~i~~~~~~~-l~vg~g~~~~~~~i~~a~~~Gad~V~ 85 (212)
T 2v82_A 15 GITPDEALAHVGAVIDAGFDAVEIPLNSP----QWEQSIPAIVDAYGDK-ALIGAGTVLKPEQVDALARMGCQLIV 85 (212)
T ss_dssp TCCHHHHHHHHHHHHHHTCCEEEEETTST----THHHHHHHHHHHHTTT-SEEEEECCCSHHHHHHHHHTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeCCCh----hHHHHHHHHHHhCCCC-eEEEeccccCHHHHHHHHHcCCCEEE
Confidence 35778888889988888999988864433 3334444443323443 43411122225678999999999875
No 481
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=20.00 E-value=3e+02 Score=21.08 Aligned_cols=96 Identities=15% Similarity=0.082 Sum_probs=53.1
Q ss_pred HHHHHHHHhCCCCEEEEcC-Cc-cCccccHHHHHHHHhccCCCCcEEEEeCccchHhhHHHHHHcCCCeEEEecCCCCHH
Q 022377 21 LRLAYLFVTSGVDKIRLTG-GE-PTVRKDIEEACFHLSKLKGLKTLAMTTNGLTLARKLPKLKESGLTSVNISLDTLVPA 98 (298)
Q Consensus 21 ~~~i~~~~~~~~~~v~~tG-GE-Pll~~~~~~ii~~~~~~~~~~~v~i~TNG~ll~~~~~~l~~~~~~~v~iSldg~~~~ 98 (298)
.+.++++...+...|.++| ++ +....-..+.+..+++..++. + +..+|....+.+.++.+.|.+.+.+. ..
T Consensus 133 ~~~i~~~~~~~~~~vli~~~~~~g~~~g~~~~~i~~~~~~~~~P-v-ia~~g~~~~~~~~~~~~~G~~~~~vg-----~a 205 (237)
T 3cwo_X 133 RDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLP-I-IASGGAGKMEHFLEAFLAGADAALAA-----SV 205 (237)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTCCSCCCHHHHHHHGGGCCSC-E-EEESCCCSHHHHHHHHHHTCSEEEES-----HH
T ss_pred HHHHHHHhhcCCCeEEEEecCCCCccccccHHHHHHHHHhcCCC-E-EecCCCCCHHHHHHHHHcCcHHHhhh-----HH
Confidence 4445555566666777776 33 443322256677766654664 4 55677666666666667788866554 22
Q ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCCEEEE
Q 022377 99 KFEFLTRRKGHEKVMESINAAIEVGYNPVKVN 130 (298)
Q Consensus 99 ~~~~ir~~~~~~~v~~~i~~l~~~g~~~v~i~ 130 (298)
.| .+..++..+.+ .+.+.|+ .+...
T Consensus 206 ~~---~~~~~~~~~~~---~l~~~~~-~~~~~ 230 (237)
T 3cwo_X 206 FH---FREIDVRELKE---YLKKHGV-NVRLE 230 (237)
T ss_dssp HH---TTSSCHHHHHH---HHHTTTC-CCCEE
T ss_pred HH---cCCCCHHHHHH---HHHHCCC-ceehh
Confidence 22 12234555544 3555676 44433
Done!