Your job contains 1 sequence.
>022378
MLNTYPVVCGYYVKRPSTNSHANTTINDHESSAIHFRSPCCSETEVLSRFTTPSRYSSSR
GSNNNNSFLHDELPAGEAPQNRLIIVDPHDDDGDGWYYGSSHKCLLICFRIIWKLLLSLG
IVLLVYYMASKPPPPKISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLF
GLHIHPPIIEMSFGRFPFASSHGRKLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLAS
RKGLPLIIRMSFRSNYRVVGDLIKSNFLHRSECFLFLHRNYDKRHATQVYNSTCAVTS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022378
(298 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2103454 - symbol:AT3G08490 "AT3G08490" species... 406 5.8e-40 2
TAIR|locus:2825837 - symbol:AT1G45688 "AT1G45688" species... 101 1.3e-07 3
TAIR|locus:2160026 - symbol:AT5G42860 "AT5G42860" species... 102 1.7e-06 3
>TAIR|locus:2103454 [details] [associations]
symbol:AT3G08490 "AT3G08490" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC074395
EMBL:AY600564 EMBL:AY649300 IPI:IPI00533756 RefSeq:NP_187462.1
UniGene:At.50830 ProteinModelPortal:Q9C6U2
EnsemblPlants:AT3G08490.1 GeneID:819996 KEGG:ath:AT3G08490
TAIR:At3g08490 eggNOG:NOG296339 HOGENOM:HOG000239860
InParanoid:Q9C6U2 OMA:ERREDHY PhylomeDB:Q9C6U2
ProtClustDB:CLSN2684947 ArrayExpress:Q9C6U2 Genevestigator:Q9C6U2
Uniprot:Q9C6U2
Length = 271
Score = 406 (148.0 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 87/200 (43%), Positives = 111/200 (55%)
Query: 99 GSSHKCLLICFRIIWKXXXXXXXXXXVYYMAXXXXXXXXXXXMAGVHQFGIGEGVDGTGV 158
G+S+ I ++ W+ V+Y+A + +QF + EGVD GV
Sbjct: 73 GTSNSSWWIVLQVGWRFLFSLGVALLVFYIATQPPHPNISFRIGRFNQFMLEEGVDSHGV 132
Query: 159 ATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRKLYAASHGSSLFQL 218
+TK LT NCS LIIDNKS +FGLHIHPP I+ FG FA + G KLY SH S+ FQL
Sbjct: 133 STKFLTFNCSTKLIIDNKSNVFGLHIHPPSIKFFFGPLNFAKAQGPKLYGLSHESTTFQL 192
Query: 219 SFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDLIKSNFLHRSECFLFLH 278
T NR MYGAG M D+L SR GLPLI+R S S+YRVV ++I + H+ EC L L
Sbjct: 193 YIATTNRAMYGAGTEMNDMLLSRAGLPLILRTSIISDYRVVWNIINPKYHHKVECLLLLA 252
Query: 279 RNYDKRHATQVYNSTCAVTS 298
H T + C + S
Sbjct: 253 DKERHSHVTMI-REKCRLVS 271
Score = 36 (17.7 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 11 YYVKRPSTNSHANTTINDHESSAIHFRSPCCSETEVL 47
Y+V+ PST H D ES F+SP S++ L
Sbjct: 11 YFVQSPSTVFH------DPESE---FQSPIRSDSAPL 38
>TAIR|locus:2825837 [details] [associations]
symbol:AT1G45688 "AT1G45688" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0048767 "root hair elongation" evidence=RCA] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 EMBL:AC083835
HOGENOM:HOG000240810 EMBL:AY099826 EMBL:AY088597 EMBL:BT000323
EMBL:AK221686 IPI:IPI00531270 PIR:A96511 RefSeq:NP_564495.1
UniGene:At.22272 ProteinModelPortal:Q9C636 PRIDE:Q9C636
EnsemblPlants:AT1G45688.1 GeneID:841102 KEGG:ath:AT1G45688
TAIR:At1g45688 eggNOG:NOG330557 InParanoid:Q9C636 OMA:KECAVIE
PhylomeDB:Q9C636 ProtClustDB:CLSN2686629 ArrayExpress:Q9C636
Genevestigator:Q9C636 Uniprot:Q9C636
Length = 342
Score = 101 (40.6 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 149 IGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRKLYA 208
I G D GV T +T N ++ ++ N FG+H+ I++SF + S +K Y
Sbjct: 172 IQAGQDAGGVGTDMITMNATLRMLYRNTGTFFGVHVTSTPIDLSFSQIKIGSGSVKKFYQ 231
Query: 209 ASHGSSLFQLSFGTRNRPMYGAGRNM 234
+ P+YG+G +
Sbjct: 232 GRKSERTVLVHVIGEKIPLYGSGSTL 257
Score = 71 (30.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 229 GAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDLIKSNFLHRSECFL-FLHRNYDKRHAT 287
GA + D A +P+ + RS V+G L++ F + EC + F H+N +K H
Sbjct: 274 GAPVPIPDPPAPPAPVPMTLSFVVRSRAYVLGKLVQPKFYKKIECDINFEHKNLNK-HI- 331
Query: 288 QVYNSTCAVTS 298
V C VT+
Sbjct: 332 -VITKNCTVTT 341
Score = 47 (21.6 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 11 YYVKRPSTNSHANTTINDHESSAIHFRSPCCSETEVLSRFTTP 53
YYV+ PS +SH D E +A F S T VLS +P
Sbjct: 26 YYVQSPSRDSH------DGEKTATSFHS-----TPVLSPMGSP 57
>TAIR|locus:2160026 [details] [associations]
symbol:AT5G42860 "AT5G42860" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
GO:GO:0005886 EMBL:CP002688 EMBL:AB008264 ProtClustDB:CLSN2686629
EMBL:AK227557 IPI:IPI00525741 RefSeq:NP_199100.1 UniGene:At.6518
UniGene:At.71339 ProteinModelPortal:Q9FMN3
EnsemblPlants:AT5G42860.1 GeneID:834297 KEGG:ath:AT5G42860
TAIR:At5g42860 InParanoid:Q9FMN3 OMA:SGSIKKF PhylomeDB:Q9FMN3
Genevestigator:Q9FMN3 Uniprot:Q9FMN3
Length = 320
Score = 102 (41.0 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 21/89 (23%), Positives = 40/89 (44%)
Query: 146 QFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRK 205
Q + G D G+ T +T N ++ ++ N FG+H+ I++SF + S +K
Sbjct: 148 QLKVQAGQDAGGIGTDMITMNATLRMLYRNTGTFFGVHVTSSPIDLSFSQITIGSGSIKK 207
Query: 206 LYAASHGSSLFQLSFGTRNRPMYGAGRNM 234
Y + ++ P+YG+G +
Sbjct: 208 FYQSRKSQRTVVVNVLGDKIPLYGSGSTL 236
Score = 64 (27.6 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 245 PLIIRMSF--RSNYRVVGDLIKSNFLHRSECFL-FLHRNYDKRHATQVYNSTCAVTS 298
P+ +R++F RS V+G L++ F R C + F H+ K H N C VTS
Sbjct: 266 PVPMRLNFTVRSRAYVLGKLVQPKFYKRIVCLINFEHKKLSK-HIPITNN--CTVTS 319
Score = 40 (19.1 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 11 YYVKRPSTNSHANTTINDHESSAIHFRS 38
Y+V+ PS +SH D E +A F S
Sbjct: 26 YFVQSPSRDSH------DGEKTATSFHS 47
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.138 0.439 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 298 257 0.00086 114 3 11 22 0.39 33
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 608 (65 KB)
Total size of DFA: 207 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.52u 0.09s 17.61t Elapsed: 00:00:01
Total cpu time: 17.52u 0.09s 17.61t Elapsed: 00:00:01
Start: Thu May 9 19:20:58 2013 End: Thu May 9 19:20:59 2013