BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 022382
         (298 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3E6U|A Chain A, Crystal Structure Of Human Lancl1
 pdb|3E6U|C Chain C, Crystal Structure Of Human Lancl1
 pdb|3E6U|B Chain B, Crystal Structure Of Human Lancl1
 pdb|3E6U|D Chain D, Crystal Structure Of Human Lancl1
 pdb|3E73|A Chain A, Crystal Structure Of Human Lancl1 Complexed With Gsh
 pdb|3E73|B Chain B, Crystal Structure Of Human Lancl1 Complexed With Gsh
          Length = 411

 Score =  243 bits (619), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 127/305 (41%), Positives = 188/305 (61%), Gaps = 18/305 (5%)

Query: 5   RRVTFICGRAGVCALGAVLAKHAGDERLLDHYLTKFKEI-KLPSDLPNELLYGRVGFLWA 63
           R +TF+CG AG  A+ AVL     +E+  +  +T+   + K+    PNE+LYGR+G+++A
Sbjct: 114 RSITFLCGDAGPLAVAAVLYHKMNNEKQAEDCITRLIHLNKIDPHAPNEMLYGRIGYIYA 173

Query: 64  CSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANR----GRCPLMYEWHGKKYWGAAHGL 119
             F+NK+ G + I  + ++ + + I+ +G  LA +     + PLMYEW+ + Y GAAHGL
Sbjct: 174 LLFVNKNFGVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGL 233

Query: 120 AGIMHVLMDMELKPDEVED---VKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPG 176
           AGI + LM   L+  + +    VK ++ Y+ + +FPSGNYP   G   D LVHWCHGAPG
Sbjct: 234 AGIYYYLMQPSLQVSQGKLHSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPG 293

Query: 177 VTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKR-VGICHGISGNTYVFLSLYRLTGN 235
           V   L +A +VF E+++L  A    +V+W+ GLLK+  G+CHG +GN Y FL+LY LT +
Sbjct: 294 VIYMLIQAYKVFREEKYLCDAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQD 353

Query: 236 VEYLYRAKAFA--CFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSEARF 293
           ++YLYRA  FA  C  Y        E      D P+SLFEG+ G  +   D++ P++ARF
Sbjct: 354 MKYLYRACKFAEWCLEY-------GEHGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARF 406

Query: 294 PAYEL 298
           PA+EL
Sbjct: 407 PAFEL 411


>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
          Length = 404

 Score = 34.3 bits (77), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 168 VHWCHGAPGVTLTLAKAAE-VFGEKEFLQAAVDAGEVVWKRGLLKRVGICH 217
           +H+C G P   L    A   +FG    L   +DA +VVW+R LL R GI H
Sbjct: 348 IHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLR-GIDH 397


>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
          Length = 404

 Score = 34.3 bits (77), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 168 VHWCHGAPGVTLTLAKAAE-VFGEKEFLQAAVDAGEVVWKRGLLKRVGICH 217
           +H+C G P   L    A   +FG    L   +DA +VVW+R LL R GI H
Sbjct: 348 IHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLR-GIDH 397


>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
          Length = 403

 Score = 34.3 bits (77), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 168 VHWCHGAPGVTLTLAKAAE-VFGEKEFLQAAVDAGEVVWKRGLLKRVGICH 217
           +H+C G P   L    A   +FG    L   +DA +VVW+R LL R GI H
Sbjct: 347 IHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLR-GIDH 396


>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
           P450eryf
          Length = 404

 Score = 34.3 bits (77), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 168 VHWCHGAPGVTLTLAKAAE-VFGEKEFLQAAVDAGEVVWKRGLLKRVGICH 217
           +H+C G P   L    A   +FG    L   +DA +VVW+R LL R GI H
Sbjct: 348 IHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLR-GIDH 397


>pdb|1JIO|A Chain A, P450eryf/6deb
          Length = 403

 Score = 34.3 bits (77), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 168 VHWCHGAPGVTLTLAKAAE-VFGEKEFLQAAVDAGEVVWKRGLLKRVGICH 217
           +H+C G P   L    A   +FG    L   +DA +VVW+R LL R GI H
Sbjct: 347 IHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLR-GIDH 396


>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
 pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
           Androstendione Bound
 pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
 pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
          Length = 403

 Score = 34.3 bits (77), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 168 VHWCHGAPGVTLTLAKAAE-VFGEKEFLQAAVDAGEVVWKRGLLKRVGICH 217
           +H+C G P   L    A   +FG    L   +DA +VVW+R LL R GI H
Sbjct: 347 IHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLR-GIDH 396


>pdb|2G02|A Chain A, Nisin Cyclase
 pdb|2G0D|A Chain A, Nisin Cyclase
          Length = 409

 Score = 33.1 bits (74), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 22/116 (18%)

Query: 170 WCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKRVG-----ICHGISGNTY 224
           WC+G PG++L             F    VD  E + +  + +++G     ICHG SG   
Sbjct: 277 WCYGGPGISLLYLYGGLALDNDYF----VDKAEKILESAMQRKLGIDSYMICHGYSG--- 329

Query: 225 VFLSLYRLTGNVEYLYRAKAFACFLYD---RAQKLIAEGKMHGGDRPYSLFEGIGG 277
               L  +    + L   K F  ++ +    +++++ E   +G +      EGI G
Sbjct: 330 ----LIEICSLFKRLLNTKKFDSYMEEFNVNSEQILEE---YGDESGTGFLEGISG 378


>pdb|1VJT|A Chain A, Crystal Structure Of Alpha-Glucosidase (Tm0752) From
           Thermotoga Maritima At 2.50 A Resolution
          Length = 483

 Score = 31.6 bits (70), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 43/113 (38%), Gaps = 16/113 (14%)

Query: 80  QMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVE-D 138
           Q    V EI +A RR            W G    G  HG+AG+  V   ++L P+EV+  
Sbjct: 169 QTANPVFEITQAVRR------------WTGANIVGFCHGVAGVYEVFEKLDLDPEEVDWQ 216

Query: 139 VKGTLRYMIKNRFP---SGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVF 188
           V G    +  NRF       YP  +     +L  W    P  T     A + +
Sbjct: 217 VAGVNHGIWLNRFRYRGEDAYPLLDEWIEKKLPEWEPKNPWDTQXSPAAXDXY 269


>pdb|4B6J|A Chain A, Crystal Structure Of Phosphoserine Phosphatase From T.
           Onnurineus
 pdb|4B6J|B Chain B, Crystal Structure Of Phosphoserine Phosphatase From T.
           Onnurineus
 pdb|4B6J|C Chain C, Crystal Structure Of Phosphoserine Phosphatase From T.
           Onnurineus
 pdb|4B6J|D Chain D, Crystal Structure Of Phosphoserine Phosphatase From T.
           Onnurineus
          Length = 201

 Score = 31.2 bits (69), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 200 AGEVVWKRGLLKRVGICHGISGNTYV 225
           +GEV W   LLKRVG+  GI   T++
Sbjct: 47  SGEVEWLDSLLKRVGLIRGIDEGTFL 72


>pdb|4AP9|A Chain A, Crystal Structure Of Phosphoserine Phosphatase From
           T.Onnurineus In Complex With Ndsb-201
 pdb|4AP9|B Chain B, Crystal Structure Of Phosphoserine Phosphatase From
           T.Onnurineus In Complex With Ndsb-201
 pdb|4AP9|C Chain C, Crystal Structure Of Phosphoserine Phosphatase From
           T.Onnurineus In Complex With Ndsb-201
 pdb|4AP9|D Chain D, Crystal Structure Of Phosphoserine Phosphatase From
           T.Onnurineus In Complex With Ndsb-201
          Length = 201

 Score = 30.8 bits (68), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 200 AGEVVWKRGLLKRVGICHGISGNTYV 225
           +GEV W   LLKRVG+  GI   T++
Sbjct: 47  SGEVEWLDSLLKRVGLIRGIDEGTFL 72


>pdb|1R9J|A Chain A, Transketolase From Leishmania Mexicana
 pdb|1R9J|B Chain B, Transketolase From Leishmania Mexicana
          Length = 673

 Score = 29.3 bits (64), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 12/85 (14%)

Query: 30  ERLLDHYLTKFKEIKLPSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAV----- 84
           + L D     +++  LP+ +P   +   V F W   + + H+G      +    V     
Sbjct: 582 QELFDAQPDTYRQAVLPAGVPVVSVEAYVSFGWE-KYSHAHVGMSGFGASAPAGVLYKKF 640

Query: 85  ---VDEIIKAGRRLANR---GRCPL 103
              V+E+++ GR LA R   G  PL
Sbjct: 641 GITVEEVVRTGRELAKRFPDGTAPL 665


>pdb|3RZH|A Chain A, Duplex Interrogation By A Direct Dna Repair Protein In The
           Search Of Damage
 pdb|3RZJ|A Chain A, Duplex Interrogation By A Direct Dna Repair Protein In The
           Search Of Damage
 pdb|3RZK|A Chain A, Duplex Interrogation By A Direct Dna Repair Protein In The
           Search Of Damage
          Length = 209

 Score = 28.1 bits (61), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 23/134 (17%)

Query: 99  GRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKP-----------DEVEDVKG-TLRYM 146
            R  +  +WH      A +G AG+ +    + L P           D V  V G T  ++
Sbjct: 45  ARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFV 104

Query: 147 IKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFG-EKEFLQAAVDA-GEVV 204
           + NR+  G+    E  + +R +     APG  +    A+  FG  ++F+    D+ G+  
Sbjct: 105 LINRYKDGSDHICEHRDDEREL-----APGSPI----ASVSFGASRDFVFRHKDSRGKSP 155

Query: 205 WKRGLLKRVGICHG 218
            +R  + R+ + HG
Sbjct: 156 SRRVAVVRLPLAHG 169


>pdb|3RZL|A Chain A, Duplex Interrogation By A Direct Dna Repair Protein In The
           Search Of Damage
 pdb|3RZL|D Chain D, Duplex Interrogation By A Direct Dna Repair Protein In The
           Search Of Damage
          Length = 208

 Score = 28.1 bits (61), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 23/134 (17%)

Query: 99  GRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKP-----------DEVEDVKG-TLRYM 146
            R  +  +WH      A +G AG+ +    + L P           D V  V G T  ++
Sbjct: 44  ARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFV 103

Query: 147 IKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFG-EKEFLQAAVDA-GEVV 204
           + NR+  G+    E  + +R +     APG  +    A+  FG  ++F+    D+ G+  
Sbjct: 104 LINRYKDGSDHICEHRDDEREL-----APGSPI----ASVSFGASRDFVFRHKDSRGKSP 154

Query: 205 WKRGLLKRVGICHG 218
            +R  + R+ + HG
Sbjct: 155 SRRVAVVRLPLAHG 168


>pdb|3RZM|A Chain A, Duplex Interrogation By A Direct Dna Repair Protein In The
           Search Of Damage
          Length = 206

 Score = 28.1 bits (61), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 23/134 (17%)

Query: 99  GRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKP-----------DEVEDVKG-TLRYM 146
            R  +  +WH      A +G AG+ +    + L P           D V  V G T  ++
Sbjct: 43  ARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFV 102

Query: 147 IKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFG-EKEFLQAAVDA-GEVV 204
           + NR+  G+    E  + +R +     APG  +    A+  FG  ++F+    D+ G+  
Sbjct: 103 LINRYKDGSDHICEHRDDEREL-----APGSPI----ASVSFGASRDFVFRHKDSRGKSP 153

Query: 205 WKRGLLKRVGICHG 218
            +R  + R+ + HG
Sbjct: 154 SRRVAVVRLPLAHG 167


>pdb|3BTY|A Chain A, Crystal Structure Of Human Abh2 Bound To Dsdna Containing
           1mea Through Cross-Linking Away From Active Site
 pdb|3BUC|A Chain A, X-Ray Structure Of Human Abh2 Bound To Dsdna With Mn(Ii)
           And 2kg
          Length = 203

 Score = 28.1 bits (61), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 23/134 (17%)

Query: 99  GRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKP-----------DEVEDVKG-TLRYM 146
            R  +  +WH      A +G AG+ +    + L P           D V  V G T  ++
Sbjct: 42  ARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFV 101

Query: 147 IKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFG-EKEFLQAAVDA-GEVV 204
           + NR+  G+    E  + +R +     APG  +    A+  FG  ++F+    D+ G+  
Sbjct: 102 LINRYKDGSDHICEHRDDEREL-----APGSPI----ASVSFGASRDFVFRHKDSRGKSP 152

Query: 205 WKRGLLKRVGICHG 218
            +R  + R+ + HG
Sbjct: 153 SRRVAVVRLPLAHG 166


>pdb|3S57|A Chain A, Abh2 Cross-Linked With Undamaged Dsdna-1 Containing
           Cofactors
 pdb|3S5A|A Chain A, Abh2 Cross-Linked To Undamaged Dsdna-2 With Cofactors
          Length = 204

 Score = 28.1 bits (61), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 23/134 (17%)

Query: 99  GRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKP-----------DEVEDVKG-TLRYM 146
            R  +  +WH      A +G AG+ +    + L P           D V  V G T  ++
Sbjct: 43  ARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFV 102

Query: 147 IKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFG-EKEFLQAAVDA-GEVV 204
           + NR+  G+    E  + +R +     APG  +    A+  FG  ++F+    D+ G+  
Sbjct: 103 LINRYKDGSDHICEHRDDEREL-----APGSPI----ASVSFGASRDFVFRHKDSRGKSP 153

Query: 205 WKRGLLKRVGICHG 218
            +R  + R+ + HG
Sbjct: 154 SRRVAVVRLPLAHG 167


>pdb|3RZG|A Chain A, Duplex Interrogation By A Direct Dna Repair Protein In The
           Search Of Damage
          Length = 209

 Score = 27.7 bits (60), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 23/134 (17%)

Query: 99  GRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKP-----------DEVEDVKG-TLRYM 146
            R  +  +WH      A +G AG+ +    + L P           D V  V G T  ++
Sbjct: 45  ARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTGQTFNFV 104

Query: 147 IKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFG-EKEFLQAAVDA-GEVV 204
           + NR+  G+    E  + +R +     APG  +    A+  FG  ++F+    D+ G+  
Sbjct: 105 LINRYKDGSDHICEHRDDERDL-----APGSPI----ASVSFGASRDFVFRHKDSRGKSP 155

Query: 205 WKRGLLKRVGICHG 218
            +R  + R+ + HG
Sbjct: 156 SRRVAVVRLPLAHG 169


>pdb|3U95|A Chain A, Crystal Structure Of A Putative Alpha-Glucosidase From
           Thermotoga Neapolitana
 pdb|3U95|B Chain B, Crystal Structure Of A Putative Alpha-Glucosidase From
           Thermotoga Neapolitana
 pdb|3U95|C Chain C, Crystal Structure Of A Putative Alpha-Glucosidase From
           Thermotoga Neapolitana
 pdb|3U95|D Chain D, Crystal Structure Of A Putative Alpha-Glucosidase From
           Thermotoga Neapolitana
 pdb|3U95|E Chain E, Crystal Structure Of A Putative Alpha-Glucosidase From
           Thermotoga Neapolitana
 pdb|3U95|F Chain F, Crystal Structure Of A Putative Alpha-Glucosidase From
           Thermotoga Neapolitana
          Length = 477

 Score = 27.7 bits (60), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 13/73 (17%)

Query: 80  QMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVE-D 138
           Q    V EI +A RR            W G    G  HG+AG+  V   + L P+EV+  
Sbjct: 157 QTANPVFEITQAVRR------------WTGANIIGFCHGVAGVYEVFERLGLDPEEVDWQ 204

Query: 139 VKGTLRYMIKNRF 151
           V G    +  NRF
Sbjct: 205 VAGVNHGIWLNRF 217


>pdb|1FL9|A Chain A, The Yjee Protein
 pdb|1FL9|B Chain B, The Yjee Protein
 pdb|1FL9|C Chain C, The Yjee Protein
          Length = 161

 Score = 27.7 bits (60), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 193 FLQAAVDAGEVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNVEY---LYR 241
           +L   + AG+    RG+L+ +G    +   TY  +  Y + G + Y   LYR
Sbjct: 40  YLNGDLGAGKTTLTRGMLQGIGHQGNVKSPTYTLVEEYNIAGKMIYHFDLYR 91


>pdb|1HTW|A Chain A, Complex Of Hi0065 With Adp And Magnesium
 pdb|1HTW|B Chain B, Complex Of Hi0065 With Adp And Magnesium
 pdb|1HTW|C Chain C, Complex Of Hi0065 With Adp And Magnesium
          Length = 158

 Score = 27.7 bits (60), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 193 FLQAAVDAGEVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNVEY---LYR 241
           +L   + AG+    RG+L+ +G    +   TY  +  Y + G + Y   LYR
Sbjct: 37  YLNGDLGAGKTTLTRGMLQGIGHQGNVKSPTYTLVEEYNIAGKMIYHFDLYR 88


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.324    0.141    0.445 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,310,027
Number of Sequences: 62578
Number of extensions: 395578
Number of successful extensions: 742
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 719
Number of HSP's gapped (non-prelim): 24
length of query: 298
length of database: 14,973,337
effective HSP length: 98
effective length of query: 200
effective length of database: 8,840,693
effective search space: 1768138600
effective search space used: 1768138600
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.3 bits)