Query 022382
Match_columns 298
No_of_seqs 131 out of 989
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 04:33:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022382.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022382hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e6u_A LANC-like protein 1; al 100.0 1.8E-47 6E-52 351.1 31.2 289 5-298 114-411 (411)
2 2g0d_A Nisin biosynthesis prot 100.0 3.4E-36 1.2E-40 276.9 16.3 272 4-290 76-391 (409)
3 3e6u_A LANC-like protein 1; al 100.0 3E-29 1E-33 230.1 16.7 257 4-287 68-349 (411)
4 2g0d_A Nisin biosynthesis prot 99.9 3.1E-26 1.1E-30 210.5 19.0 263 6-287 30-339 (409)
5 2ahf_A Unsaturated glucuronyl 98.2 2.9E-05 9.8E-10 69.7 15.0 221 21-253 52-321 (377)
6 2zzr_A Unsaturated glucuronyl 98.2 6.9E-05 2.4E-09 67.6 17.3 220 22-253 79-346 (397)
7 3pmm_A Putative cytoplasmic pr 98.1 0.00013 4.5E-09 65.7 17.6 232 15-253 71-333 (382)
8 2gz6_A N-acetyl-D-glucosamine 98.0 0.0011 3.7E-08 59.6 21.2 230 16-253 58-340 (388)
9 3k7x_A LIN0763 protein; Q92DQ0 97.9 0.0011 3.8E-08 58.8 19.0 234 13-252 48-301 (349)
10 2zzr_A Unsaturated glucuronyl 97.8 0.00055 1.9E-08 61.7 15.2 215 50-288 65-320 (397)
11 2ahf_A Unsaturated glucuronyl 97.6 0.002 6.9E-08 57.7 15.6 213 50-287 39-294 (377)
12 3pmm_A Putative cytoplasmic pr 97.5 0.0036 1.2E-07 56.2 15.6 209 53-287 68-310 (382)
13 3k7x_A LIN0763 protein; Q92DQ0 97.4 0.0023 7.8E-08 56.8 12.9 176 57-253 48-249 (349)
14 1nc5_A Hypothetical protein YT 97.3 0.0052 1.8E-07 55.0 14.6 229 14-253 43-315 (373)
15 1fp3_A N-acyl-D-glucosamine 2- 97.3 0.012 4E-07 53.1 16.9 229 17-254 62-351 (402)
16 2gz6_A N-acetyl-D-glucosamine 97.0 0.015 5.3E-07 52.0 14.4 187 16-207 120-339 (388)
17 3gt5_A N-acetylglucosamine 2-e 97.0 0.14 4.7E-06 46.1 20.4 231 16-254 57-347 (402)
18 2zbl_A Putative isomerase; N-a 96.8 0.038 1.3E-06 50.2 15.7 231 16-254 56-353 (421)
19 3k11_A Putative glycosyl hydro 96.6 0.086 2.9E-06 48.1 15.8 233 15-252 85-364 (445)
20 3gt5_A N-acetylglucosamine 2-e 96.3 0.012 4E-07 53.2 8.3 133 120-253 55-209 (402)
21 1nc5_A Hypothetical protein YT 95.9 0.29 9.9E-06 43.5 15.4 184 19-207 95-314 (373)
22 3k11_A Putative glycosyl hydro 95.7 0.15 5E-06 46.6 12.5 220 59-287 86-341 (445)
23 2zbl_A Putative isomerase; N-a 92.9 0.21 7.1E-06 45.2 7.0 129 122-251 56-206 (421)
24 1nxc_A Mannosyl-oligosaccharid 92.2 6.8 0.00023 35.9 16.1 226 21-254 115-405 (478)
25 1r76_A Pectate lyase; A-helica 90.4 1.3 4.3E-05 39.7 9.0 131 119-251 151-325 (408)
26 1nxc_A Mannosyl-oligosaccharid 89.9 2 6.9E-05 39.4 10.2 175 26-207 75-272 (478)
27 3e7j_A Heparinase II protein; 89.3 3.1 0.00011 40.5 11.4 211 17-239 85-312 (749)
28 1fp3_A N-acyl-D-glucosamine 2- 88.1 4.8 0.00016 35.7 11.3 76 178-253 62-158 (402)
29 1gxm_A Pectate lyase; mechanis 87.7 1.6 5.6E-05 37.8 7.5 130 119-251 76-248 (332)
30 3h7l_A Endoglucanase; dehydrog 85.1 12 0.00041 35.2 12.5 27 17-43 309-335 (586)
31 1gxm_A Pectate lyase; mechanis 84.6 3.2 0.00011 36.0 7.8 142 56-204 75-246 (332)
32 1x9d_A Endoplasmic reticulum m 84.4 17 0.00057 33.8 12.9 174 26-206 139-335 (538)
33 3h7l_A Endoglucanase; dehydrog 82.8 7.3 0.00025 36.6 10.0 123 113-251 246-397 (586)
34 1r76_A Pectate lyase; A-helica 81.2 29 0.001 30.9 14.9 116 137-252 81-257 (408)
35 3a0o_A Oligo alginate lyase; a 81.0 22 0.00076 34.5 13.2 28 16-43 211-238 (776)
36 1hcu_A Alpha-1,2-mannosidase; 79.8 14 0.00047 34.1 10.6 174 26-206 67-278 (503)
37 1dl2_A Class I alpha-1,2-manno 76.4 3 0.0001 38.6 5.0 173 28-206 71-273 (511)
38 1ia6_A Cellulase CEL9M; cellul 74.5 49 0.0017 29.8 15.1 168 16-206 158-342 (441)
39 2ri9_A Mannosyl-oligosaccharid 71.6 35 0.0012 31.1 10.9 174 26-206 57-265 (475)
40 1x9d_A Endoplasmic reticulum m 62.7 24 0.00082 32.7 7.9 76 177-252 174-270 (538)
41 1ks8_A Endo-B-1,4-glucanase; c 62.0 45 0.0015 29.9 9.6 69 178-246 156-239 (433)
42 1w6k_A Lanosterol synthase; cy 59.8 92 0.0032 30.1 11.9 93 57-158 534-631 (732)
43 1wzz_A Probable endoglucanase; 58.8 30 0.001 29.9 7.6 78 172-249 106-200 (334)
44 1dl2_A Class I alpha-1,2-manno 57.0 31 0.001 31.8 7.6 76 178-253 105-209 (511)
45 2sqc_A Squalene-hopene cyclase 48.9 1.5E+02 0.0053 27.8 11.3 70 79-158 466-535 (631)
46 1w6k_A Lanosterol synthase; cy 48.2 70 0.0024 30.9 8.9 88 120-207 458-570 (732)
47 2v8i_A Pectate lyase; periplas 46.1 1.2E+02 0.004 27.7 9.1 113 177-296 378-504 (543)
48 2yik_A Endoglucanase; hydrolas 44.3 1.7E+02 0.0057 27.6 10.7 69 177-245 222-305 (611)
49 2v8i_A Pectate lyase; periplas 34.3 1.2E+02 0.004 27.6 7.2 75 16-91 378-461 (543)
50 3gzk_A Cellulase; fold from GH 33.3 1.7E+02 0.0058 27.0 8.7 113 133-245 188-332 (537)
51 2ri9_A Mannosyl-oligosaccharid 33.1 48 0.0016 30.2 4.8 218 30-254 118-407 (475)
52 1hcu_A Alpha-1,2-mannosidase; 31.6 51 0.0017 30.3 4.7 33 222-254 394-426 (503)
53 1ks8_A Endo-B-1,4-glucanase; c 30.0 2.8E+02 0.0097 24.7 9.4 72 177-251 215-286 (433)
54 2sqc_A Squalene-hopene cyclase 29.7 1.6E+02 0.0054 27.7 8.0 42 116-159 40-81 (631)
55 1kwf_A Endoglucanase A; hydrol 29.5 1.8E+02 0.0062 25.2 7.8 80 172-251 120-214 (363)
56 3qxf_A Endoglucanase; cellulas 25.4 90 0.0031 27.2 5.0 35 173-207 96-130 (355)
57 1hzf_A Complement factor C4A; 25.3 1.6E+02 0.0055 25.4 6.8 38 122-159 126-164 (367)
58 3ren_A Glycosyl hydrolase, fam 25.2 91 0.0031 27.1 5.0 69 137-207 79-149 (350)
59 1ut9_A Cellulose 1,4-beta-cell 24.4 4.4E+02 0.015 24.6 11.1 109 133-244 227-379 (609)
60 1g87_A Endocellulase 9G; endog 20.8 3E+02 0.01 25.8 8.0 68 177-244 156-236 (614)
No 1
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=100.00 E-value=1.8e-47 Score=351.12 Aligned_cols=289 Identities=43% Similarity=0.830 Sum_probs=242.1
Q ss_pred CcceeecCchHHHHHHHHHHHHcCChHHHHHHHHHHhhc-cCCCCCCcccccchHHHHHHHHHHhhhhCCCcCcHHHHHH
Q 022382 5 RRVTFICGRAGVCALGAVLAKHAGDERLLDHYLTKFKEI-KLPSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRA 83 (298)
Q Consensus 5 ~~~sl~~G~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~G~aGil~~l~~l~~~~~~~~~~~~~~~~ 83 (298)
+.+|++.|.+|+++++..+|+.+++++..+...+.+.+. ....+.+.|+++|.||++++++.+++.++++++.+..+.+
T Consensus 114 ~~~~~~~G~aG~l~~l~~ly~~~g~~~~a~~~~~~l~~~~~~~~~~~~dll~G~AG~l~aLl~L~~~~~~~~~~~~~i~~ 193 (411)
T 3e6u_A 114 RSITFLCGDAGPLAVAAVLYHKMNNEKQAEDCITRLIHLNKIDPHAPNEMLYGRIGYIYALLFVNKNFGVEKIPQSHIQQ 193 (411)
T ss_dssp CCCCTTTSTHHHHHHHHHHHHHTTCHHHHHHHHHHHHGGGGGCTTCCSSTTTSHHHHHHHHHHHHHHHSSCCSCHHHHHH
T ss_pred cCCccccCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcccccCChhhhcCcHHHHHHHHHHHHHcCCccchHHHHHH
Confidence 568999999999999999999999987666655555443 2344456999999999999999999999999888666788
Q ss_pred HHHHHHHhcHhhhhc----CCCCcceeecCccccccccchHHHHHHHhcCCCCC---chHHHHHHHHHHHHHccCCCCCC
Q 022382 84 VVDEIIKAGRRLANR----GRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKP---DEVEDVKGTLRYMIKNRFPSGNY 156 (298)
Q Consensus 84 ~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~---~~~~~i~~~l~~~~~~~~~~g~w 156 (298)
+++.+++..+..... ...|++|+|.+..++|++||+|||+++|+++++.. ...+.++++++++++...++|+|
T Consensus 194 i~~~ii~~g~~~~~~~~~~~~~pl~~~w~~~~~~G~aHG~aGI~~~Ll~~~~~~~~~~~~~~i~~~l~~l~~~~~~~g~w 273 (411)
T 3e6u_A 194 ICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYLMQPSLQVSQGKLHSLVKPSVDYVCQLKFPSGNY 273 (411)
T ss_dssp HHHHHHHHHHHHHHHTTTTTTCSCCCCBTTBCBCSTTTSHHHHHHHHTCGGGCCCHHHHHHTHHHHHHHHHHTCCTTSCC
T ss_pred HHHHHHHHHHHHHHhccccCCCCcceeecCccCCcccccHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHhhccCCCC
Confidence 899888876543211 24677888988899999999999999999998653 25678999999999876677999
Q ss_pred CCCCCCCCCcccccccCchhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcC-CCCCccccchhhHHHHHHHHHHHhCC
Q 022382 157 PSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGL-LKRVGICHGISGNTYVFLSLYRLTGN 235 (298)
Q Consensus 157 ~~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lCHG~aG~~~~l~~l~~~~~~ 235 (298)
|+...+..+..++||||++||++++..+++.++|+++.+.++++++.+|++++ .+++++|||.+|++++++++++.|++
T Consensus 274 p~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~~~lChG~aG~~~~ll~~~~~t~~ 353 (411)
T 3e6u_A 274 PPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQD 353 (411)
T ss_dssp CSBTTCCCCCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCSBTTCSCSTTSHHHHHHHHHHHHHHHCC
T ss_pred CCCCCcccCccccccCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcCccCCCCceecChHHHHHHHHHHHHHhCC
Confidence 98654445568899999999999999999999999999999999999999886 46799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCccccccchHHHHHHHHHccCCCCCCCCCCCC
Q 022382 236 VEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIEPSEARFPAYEL 298 (298)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~gl~~G~sGi~~~Ll~~~~~~~~~~~~~~~ 298 (298)
++|+++|.++++.+.++.. +.....+.++|||+|.|||+++|+++.+|++++||+||+
T Consensus 354 ~~~~~~A~~~~~~~~~~~~-----~~~~~~~~~~sL~~G~aGi~~~Ll~l~~p~~~~fp~~~~ 411 (411)
T 3e6u_A 354 MKYLYRACKFAEWCLEYGE-----HGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL 411 (411)
T ss_dssp HHHHHHHHHHHHHHTTTTS-----SCCCCCSSTTSTTTSHHHHHHHHHHHTSGGGCCCTTTCC
T ss_pred HHHHHHHHHHHHHHHHhcc-----ccCCCCCCCChhhccHHHHHHHHHHHcCCCcccCCCCCC
Confidence 9999999988877654321 112223567899999999999999999999999999996
No 2
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=100.00 E-value=3.4e-36 Score=276.95 Aligned_cols=272 Identities=18% Similarity=0.215 Sum_probs=196.6
Q ss_pred CCcceeecCchHHHHHHHHHHHHcC-ChHHHHHHHHHHhh-----c-cCC----CCCCcccccchHHHHHHHHHHhhhhC
Q 022382 4 CRRVTFICGRAGVCALGAVLAKHAG-DERLLDHYLTKFKE-----I-KLP----SDLPNELLYGRVGFLWACSFLNKHMG 72 (298)
Q Consensus 4 ~~~~sl~~G~~Gi~~~l~~~~~~~~-~~~~~~~~~~~~~~-----~-~~~----~~~~~d~~~G~aGil~~l~~l~~~~~ 72 (298)
..+.|+|+|.+|+++++..+++..+ .++.++.+.+.+.. + ... ....+|+++|.+|++++++.++
T Consensus 76 ~~~~gl~~G~aGi~~~l~~l~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~dl~~G~aGi~~~Ll~l~---- 151 (409)
T 2g0d_A 76 LLTGSLYSGAAGIALSILHLREDDEKYKNLLDSLNRYIEYFVREKIEGFNLENITPPDYDVIEGLSGILSYLLLIN---- 151 (409)
T ss_dssp CSCCCTTTSHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCHHHHSSSSSHHHHHHHHTTCC----
T ss_pred CCCCcccccHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccHhcCHHHHHHHHHHcc----
Confidence 3578999999999988776544332 12233333332221 1 111 2235899999999999998875
Q ss_pred CCcCcHHHHHHHHHHHHHhcHhhhhcCCCCccee-------------e-cCccccccccchHHHHHHHhcCCCC----Cc
Q 022382 73 KDTISTAQMRAVVDEIIKAGRRLANRGRCPLMYE-------------W-HGKKYWGAAHGLAGIMHVLMDMELK----PD 134 (298)
Q Consensus 73 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-------------~-~~~~~~G~aHG~aGi~~~L~~~~~~----~~ 134 (298)
++... +.+.++++++++... +....|.++. + .+..++|++||++||+++|.+++.. +.
T Consensus 152 ~~~~~-~~~~~~~~~l~~~~~---~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~ 227 (409)
T 2g0d_A 152 DEQYD-DLKILIINFLSNLTK---ENNGLISLYIKSENQMSQSESEMYPLGCLNMGLAHGLAGVGCILAYAHIKGYSNEA 227 (409)
T ss_dssp CGGGH-HHHHHHHHHHHHTTS---CCSSSCTTCBCGGGSSSHHHHHHCTTCBEECCTTTSHHHHHHHHHHHHHHTCCCHH
T ss_pred CchhH-HHHHHHHHHHHHHHh---cCCCCCceeecCCccccchhhhcCCCCCccCCchhhHHHHHHHHHHHHHhCCCChh
Confidence 33333 477888888887532 1111111110 0 1335799999999999999888642 34
Q ss_pred hHHHHHHHHHHHHHccC--CCCC-CCC-CC----------CCCCCcccccccCchhHHHHHHHHHHHhCcHHHHHHHHHH
Q 022382 135 EVEDVKGTLRYMIKNRF--PSGN-YPS-SE----------GSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDA 200 (298)
Q Consensus 135 ~~~~i~~~l~~~~~~~~--~~g~-w~~-~~----------~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~~~~~ 200 (298)
+.+.++++++++.+.++ ++|+ ||. .. ....+.+++||||+|||+++++.+++.++|+++.+.++++
T Consensus 228 ~~~~~~~~~~~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~d~~~~~~a~~~ 307 (409)
T 2g0d_A 228 SLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALDNDYFVDKAEKI 307 (409)
T ss_dssp HHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcCCCccccHhhhcccccccCCCCCCcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 67889999999987666 4677 987 11 1123457999999999999999999999999999999999
Q ss_pred HHHHHHh-cCCCCCccccchhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCccccccchHHHH
Q 022382 201 GEVVWKR-GLLKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMT 279 (298)
Q Consensus 201 ~~~~~~~-~~~~~~~lCHG~aG~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~gl~~G~sGi~ 279 (298)
++.++++ ...++++||||.+|++++++.+++.++++++.+++.++... .... .|. +....++|||+|.+||+
T Consensus 308 ~~~~~~~~~~~~~~~LCHG~aG~~~~l~~l~~~~~~~~~~~~a~~~~~~---~~~~---~g~-~~~~~~~gL~~G~AGi~ 380 (409)
T 2g0d_A 308 LESAMQRKLGIDSYMICHGYSGLIEICSLFKRLLNTKKFDSYMEEFNVN---SEQI---LEE-YGDESGTGFLEGISGCI 380 (409)
T ss_dssp HHHHHHHCTTCCSCCTTTSHHHHHHHHHHHHHHHCCCTTHHHHHHHHHT---HHHH---HHS-CCSTTCSSTTTSHHHHH
T ss_pred HHHHHHhccCCCCCCCCChHHHHHHHHHHHHHHhCCHHHHHHHHHcCCc---chhh---ccc-cCCCCCCceeCCHHHHH
Confidence 9999986 45678999999999999999999999999998888763211 1110 122 23457789999999999
Q ss_pred HHHHHccCCCC
Q 022382 280 HLFLDMIEPSE 290 (298)
Q Consensus 280 ~~Ll~~~~~~~ 290 (298)
++|+++.+|++
T Consensus 381 ~~Ll~l~~p~~ 391 (409)
T 2g0d_A 381 LVLSKFEYSIN 391 (409)
T ss_dssp HHHHHHHSCCC
T ss_pred HHHHHhcCCCC
Confidence 99999999876
No 3
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=99.96 E-value=3e-29 Score=230.08 Aligned_cols=257 Identities=18% Similarity=0.211 Sum_probs=187.6
Q ss_pred CCcceeecCchHHHHHHHHHHHHcCChHHHHHHHHHHhhc-cCCCCCCcccccchHHHHHHHHHHhhhhCCCcCcHHHHH
Q 022382 4 CRRVTFICGRAGVCALGAVLAKHAGDERLLDHYLTKFKEI-KLPSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMR 82 (298)
Q Consensus 4 ~~~~sl~~G~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~G~aGil~~l~~l~~~~~~~~~~~~~~~ 82 (298)
..+.|+|+|.+||++++.++++.++|+++.+.+.+.++.+ ...++..++++.|.+|+++++..+++.+++++ .+.
T Consensus 68 ~~~~~lY~G~~Gia~~l~~l~~~t~d~~yl~~a~~~l~~~~~~l~~~~~~~~~G~aG~l~~l~~ly~~~g~~~----~a~ 143 (411)
T 3e6u_A 68 PRDGTGYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLTKRSITFLCGDAGPLAVAAVLYHKMNNEK----QAE 143 (411)
T ss_dssp TTCCCSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCCSCCCCTTTSTHHHHHHHHHHHHHTTCHH----HHH
T ss_pred CCCCCeeeChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccCCccccCcHHHHHHHHHHHHHhCCHH----HHH
Confidence 3578999999999999999999999999999998888765 22224578999999999999999999988753 456
Q ss_pred HHHHHHHHhcHhhhhcCCCCcceeecCccccccccchHHHHHHHhcCCCC---CchHH-HHHHHHHHHHHc--cC---CC
Q 022382 83 AVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELK---PDEVE-DVKGTLRYMIKN--RF---PS 153 (298)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~---~~~~~-~i~~~l~~~~~~--~~---~~ 153 (298)
++++++++.... . .....++.||.||++++|+.+++. +...+ .+++.++.+++. .. ..
T Consensus 144 ~~~~~l~~~~~~---~----------~~~~~dll~G~AG~l~aLl~L~~~~~~~~~~~~~i~~i~~~ii~~g~~~~~~~~ 210 (411)
T 3e6u_A 144 DCITRLIHLNKI---D----------PHAPNEMLYGRIGYIYALLFVNKNFGVEKIPQSHIQQICETILTSGENLARKRN 210 (411)
T ss_dssp HHHHHHHGGGGG---C----------TTCCSSTTTSHHHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcc---c----------ccCChhhhcCcHHHHHHHHHHHHHcCCccchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 667766654311 0 011368999999999999999863 22222 233333333221 00 01
Q ss_pred CCCCCC--CCCCCCcccccccCchhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcC----CC---------CCccccc
Q 022382 154 GNYPSS--EGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGL----LK---------RVGICHG 218 (298)
Q Consensus 154 g~w~~~--~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---------~~~lCHG 218 (298)
..|+.+ .........+||||.+||+++++.+++.++++++.+.++++++.+.+... .. .++||||
T Consensus 211 ~~~~~pl~~~w~~~~~~G~aHG~aGI~~~Ll~~~~~~~~~~~~~~i~~~l~~l~~~~~~~g~wp~~~~~~~~~~~~wChG 290 (411)
T 3e6u_A 211 FTAKSPLMYEWYQEYYVGAAHGLAGIYYYLMQPSLQVSQGKLHSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHG 290 (411)
T ss_dssp TTTTCSCCCCBTTBCBCSTTTSHHHHHHHHTCGGGCCCHHHHHHTHHHHHHHHHHTCCTTSCCCSBTTCCCCCCCSSSSS
T ss_pred ccCCCCcceeecCccCCcccccHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccCccccccCC
Confidence 001110 01122456899999999999999999889999999999999988866432 11 1479999
Q ss_pred hhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCccccccchHHHHHHHHHccC
Q 022382 219 ISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGMTHLFLDMIE 287 (298)
Q Consensus 219 ~aG~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~gl~~G~sGi~~~Ll~~~~ 287 (298)
.+|++.+++.+++.++++++++.+.+..+.+... |. ...++|||+|.+|++++++++.+
T Consensus 291 ~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~-------g~---~~~~~~lChG~aG~~~~ll~~~~ 349 (411)
T 3e6u_A 291 APGVIYMLIQAYKVFREEKYLCDAYQCADVIWQY-------GL---LKKGYGLCHGSAGNAYAFLTLYN 349 (411)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-------CS---BTTCSCSTTSHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-------Cc---cCCCCceecChHHHHHHHHHHHH
Confidence 9999999999999999999999888766544332 11 24678999999999999999764
No 4
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=99.94 E-value=3.1e-26 Score=210.52 Aligned_cols=263 Identities=15% Similarity=0.082 Sum_probs=184.0
Q ss_pred cceeecCchHHHHHHHHHHHHcCChHHHHHHHHHHhhc----cCCCCCCcccccchHHHHHHHHHHhhhhCCCcCcHHHH
Q 022382 6 RVTFICGRAGVCALGAVLAKHAGDERLLDHYLTKFKEI----KLPSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQM 81 (298)
Q Consensus 6 ~~sl~~G~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~G~aGil~~l~~l~~~~~~~~~~~~~~ 81 (298)
+.++|+|.+||++++.++++.++++++.+.+.+.++.+ ........++++|.+|+++++..+.+..+ ++ .+.+
T Consensus 30 ~~sLy~G~aGial~l~~l~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~gl~~G~aGi~~~l~~l~~~~~--~~-~~~l 106 (409)
T 2g0d_A 30 ELTLSTGLPGIILMLAELKNKDNSKIYQKKIDNYIEYIVSKLSTYGLLTGSLYSGAAGIALSILHLREDDE--KY-KNLL 106 (409)
T ss_dssp GGSTTTSHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHHHHHHCCSCCCTTTSHHHHHHHHGGGTTTCH--HH-HHHH
T ss_pred CCchhccHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHhCCCCCCcccccHHHHHHHHHHHHhccc--hH-HHHH
Confidence 68999999999999999999999988777666665543 11123467999999999999887764422 11 1233
Q ss_pred HHHHHHHHHhcHhhhhc-CCCCcceeecCccccccccchHHHHHHHhcCCCCCchHHHHHHHHHHHHHccCC--C-CCCC
Q 022382 82 RAVVDEIIKAGRRLANR-GRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFP--S-GNYP 157 (298)
Q Consensus 82 ~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~i~~~l~~~~~~~~~--~-g~w~ 157 (298)
.++.+.+.......... ...++ .....++.||.||++++|+.++ .+...+.++++++++++...+ . ..|+
T Consensus 107 ~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~dl~~G~aGi~~~Ll~l~-~~~~~~~~~~~~~~l~~~~~~~~~~~~w~ 180 (409)
T 2g0d_A 107 DSLNRYIEYFVREKIEGFNLENI-----TPPDYDVIEGLSGILSYLLLIN-DEQYDDLKILIINFLSNLTKENNGLISLY 180 (409)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGC-----CHHHHSSSSSHHHHHHHHTTCC-CGGGHHHHHHHHHHHHHTTSCCSSSCTTC
T ss_pred HHHHHHHHHHHHHHHHHhhhccC-----CcccccHhcCHHHHHHHHHHcc-CchhHHHHHHHHHHHHHHHhcCCCCCcee
Confidence 33333333221111110 00111 1235799999999999999987 444567788888888864331 1 1354
Q ss_pred CCCCC-----------CCCcccccccCchhHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHh------cC----------
Q 022382 158 SSEGS-----------ESDRLVHWCHGAPGVTLTLAKAAEVF-GEKEFLQAAVDAGEVVWKR------GL---------- 209 (298)
Q Consensus 158 ~~~~~-----------~~~~~~~wChG~~Gi~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~---------- 209 (298)
....+ ......+||||.+||+..+..++... .++++.+.++++++.+.+. +.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g~~~~~ 260 (409)
T 2g0d_A 181 IKSENQMSQSESEMYPLGCLNMGLAHGLAGVGCILAYAHIKGYSNEASLSALQKIIFIYEKFELERKKQFLWKDGLVADE 260 (409)
T ss_dssp BCGGGSSSHHHHHHCTTCBEECCTTTSHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHH
T ss_pred ecCCccccchhhhcCCCCCccCCchhhHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCCCccccHh
Confidence 32111 11246899999999998888877654 4899999999998877332 10
Q ss_pred -----------CCCCccccchhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCccccccchHHH
Q 022382 210 -----------LKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQKLIAEGKMHGGDRPYSLFEGIGGM 278 (298)
Q Consensus 210 -----------~~~~~lCHG~aG~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~gl~~G~sGi 278 (298)
...++||||.+|++.+++.+++.++|+++.+.+++..+.+.++. ....+++||+|.+|+
T Consensus 261 ~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~d~~~~~~a~~~~~~~~~~~----------~~~~~~~LCHG~aG~ 330 (409)
T 2g0d_A 261 LKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALDNDYFVDKAEKILESAMQRK----------LGIDSYMICHGYSGL 330 (409)
T ss_dssp HHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC----------TTCCSCCTTTSHHHH
T ss_pred hhcccccccCCCCCCcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc----------cCCCCCCCCChHHHH
Confidence 12488999999999999999999999999998888776666540 135689999999999
Q ss_pred HHHHHHccC
Q 022382 279 THLFLDMIE 287 (298)
Q Consensus 279 ~~~Ll~~~~ 287 (298)
+++++++.+
T Consensus 331 ~~~l~~l~~ 339 (409)
T 2g0d_A 331 IEICSLFKR 339 (409)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998765
No 5
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=98.23 E-value=2.9e-05 Score=69.73 Aligned_cols=221 Identities=13% Similarity=0.108 Sum_probs=138.2
Q ss_pred HHHHHHcCChHHHHHHHHHHhhcc--CCCC---CCcccccchHHHHH--HHHHHhhhhCCCcCcHHHHHHHHHHHHHhcH
Q 022382 21 AVLAKHAGDERLLDHYLTKFKEIK--LPSD---LPNELLYGRVGFLW--ACSFLNKHMGKDTISTAQMRAVVDEIIKAGR 93 (298)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~d~~~G~aGil~--~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~ 93 (298)
-.+|+.|||+++.+.+.+..+.+. +.+. ..+| -|.++ ++...++.+++++++ +.+.+.++.|+....
T Consensus 52 w~~ye~Tgd~~~~~~a~~~~~~l~~~~~~~~~~~~HD-----~Gf~~~~s~~~~y~ltg~~~~~-~~~~~aA~~L~~r~~ 125 (377)
T 2ahf_A 52 WLCYEYTGDEQYREGAVRTVASFRERLDRFENLDHHN-----IGFLYSLSAKAQWIVEKDESAR-KLALDAADVLMRRWR 125 (377)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHTTTTTCCBST-----HHHHHHTTHHHHHHHHCCHHHH-HHHHHHHHHHHTTEE
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhhhcccCCCCCC-----chHhhHHHHHHHHHHhCCHHHH-HHHHHHHHHHHHhCC
Confidence 346889999999888877655441 1111 1234 45533 466678899998887 478888888877654
Q ss_pred hhhhcCCCCcceeecC---ccc--cccccchHHHHHHHhcCCC---CCchHHHHHHHHHHHHHccC-CCCC-CCCCC---
Q 022382 94 RLANRGRCPLMYEWHG---KKY--WGAAHGLAGIMHVLMDMEL---KPDEVEDVKGTLRYMIKNRF-PSGN-YPSSE--- 160 (298)
Q Consensus 94 ~~~~~~~~~~~~~~~~---~~~--~G~aHG~aGi~~~L~~~~~---~~~~~~~i~~~l~~~~~~~~-~~g~-w~~~~--- 160 (298)
+.. .....|.. ..+ .-+.--+. .+.+|..+++ .+++.+.+++..++++++.+ ++|. |+...
T Consensus 126 ~~~-----g~i~sw~~~~~~~~~~~~iID~mm-ni~~L~~A~~~~gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~ 199 (377)
T 2ahf_A 126 ADA-----GIIQAWGPKGDPENGGRIIIDCLL-NLPLLLWAGEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDP 199 (377)
T ss_dssp TTT-----TEECCBSSTTCTTTTTEEEGGGGG-GHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECT
T ss_pred CCC-----CeEEeccCCCCCCCCceEEechHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeC
Confidence 210 11111211 000 00111111 1335555543 46688888888888887655 3343 22110
Q ss_pred --C--------CCCCcccccccCchhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh----c--CC--------CCCccc
Q 022382 161 --G--------SESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKR----G--LL--------KRVGIC 216 (298)
Q Consensus 161 --~--------~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~--------~~~~lC 216 (298)
. ........|+.|-+-.++++..+++.++|+++.+.+++..+...+. + +. .++--=
T Consensus 200 ~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~l~~~~~d~~pywd~~~~~~~~~~~d~ 279 (377)
T 2ahf_A 200 ENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLARVPEDGVVYWDFEVPQEPSSYRDS 279 (377)
T ss_dssp TTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCTTSSCBSBTTSCCCTTSCBCH
T ss_pred CCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHhhHHhCCcccccCCCccCCCccCC
Confidence 0 0111235799999999999999999999999999999988877653 1 10 011223
Q ss_pred cchhhHHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHH
Q 022382 217 HGISGNTYVFLSLYRLTG-----NVEYLYRAKAFACFLYDRA 253 (298)
Q Consensus 217 HG~aG~~~~l~~l~~~~~-----~~~~~~~~~~~~~~~~~~~ 253 (298)
.+.+..+..|+++++.++ +++|++.|+++.+.+.+.+
T Consensus 280 Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y 321 (377)
T 2ahf_A 280 SASAITACGLLEIASQLDESDPERQRFIDAAKTTVTALRDGY 321 (377)
T ss_dssp HHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHH
Confidence 577788888999999996 6779998888887776654
No 6
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=98.22 E-value=6.9e-05 Score=67.60 Aligned_cols=220 Identities=9% Similarity=0.074 Sum_probs=135.1
Q ss_pred HHHHHcCChHHHHHHHHHHhhcc--C--C-CCCCcccccchHHHHH--HHHHHhhhhCCCcCcHHHHHHHHHHHHHhcHh
Q 022382 22 VLAKHAGDERLLDHYLTKFKEIK--L--P-SDLPNELLYGRVGFLW--ACSFLNKHMGKDTISTAQMRAVVDEIIKAGRR 94 (298)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~--~--~-~~~~~d~~~G~aGil~--~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~ 94 (298)
.+|+.|||+.+.+.+.+..+.+. + + .-...| -|.++ ++...++.+++++++ +.+.+.++.|+....+
T Consensus 79 ~~ye~Tgd~~~~~~a~~~~~~l~~~~~~~~~~~~HD-----~GF~~~~s~~~~y~ltg~~~~~-~~~~~aA~~L~~r~~~ 152 (397)
T 2zzr_A 79 LAYEYNQDKKLKNIAHKNVLSFLNRINNRIALDHHD-----LGFLYTPSCTAEYRINGDVKAL-EATIKAADKLMERYQE 152 (397)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHHTTCSCCSST-----HHHHHTTTHHHHHHHHCCHHHH-HHHHHHHHHHHTTEET
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHhhhhcccCCCCC-----chHHHHHHHHHHHHHhCCHHHH-HHHHHHHHHHHHHhCc
Confidence 36889999999888877665441 1 1 111234 34444 344577889998877 4888888888776522
Q ss_pred hhhcCCCCcceeecC--c--cccccccchHHHHHHHhcCCC---CCchHHHHHHHHHHHHHccC-CCCC-CCCC-----C
Q 022382 95 LANRGRCPLMYEWHG--K--KYWGAAHGLAGIMHVLMDMEL---KPDEVEDVKGTLRYMIKNRF-PSGN-YPSS-----E 160 (298)
Q Consensus 95 ~~~~~~~~~~~~~~~--~--~~~G~aHG~aGi~~~L~~~~~---~~~~~~~i~~~l~~~~~~~~-~~g~-w~~~-----~ 160 (298)
. ......|.. . ...-+.-.+. -+.+|..+++ .+++.+.+++..++.+++.+ ++|. +... .
T Consensus 153 ~-----~g~iqsw~~~~~~~~~~~iID~~m-ni~~L~~A~~~~gd~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~ 226 (397)
T 2zzr_A 153 K-----GGFIQAWGELGYKEHYRLIIDCLL-NIQLLFFAYEQTGDEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPET 226 (397)
T ss_dssp T-----TTEECCSSSTTCGGGCEEETTHHH-HTHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTT
T ss_pred C-----CCEEEecccCCCCCCCceeechHh-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCC
Confidence 1 111111210 0 0111122222 2334554443 35678888888888887665 3332 1110 0
Q ss_pred C--------CCCCcccccccCchhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc------CC--------CCCccccc
Q 022382 161 G--------SESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRG------LL--------KRVGICHG 218 (298)
Q Consensus 161 ~--------~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--------~~~~lCHG 218 (298)
. ........|+.|-+-.++++..+++.++|+++.+.|++..+...+.- +. ..+-==.|
T Consensus 227 G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~~~d~~pywdt~~~~~~~~~~D~Sa 306 (397)
T 2zzr_A 227 GEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPEDKVSYWDLIFTDGSGQPRDTSA 306 (397)
T ss_dssp CCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCCTTSCCBSBTTCCTTSCCCBCHHH
T ss_pred CCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHhCCccccCCCCCCCCCcCCCCH
Confidence 0 01112247999999999999999999999999999999887776531 10 00001245
Q ss_pred hhhHHHHHHHHHHHhCC---HH--HHHHHHHHHHHHHHHH
Q 022382 219 ISGNTYVFLSLYRLTGN---VE--YLYRAKAFACFLYDRA 253 (298)
Q Consensus 219 ~aG~~~~l~~l~~~~~~---~~--~~~~~~~~~~~~~~~~ 253 (298)
.+..+..|+++++.+++ ++ |++.|+++.+.+...+
T Consensus 307 ~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y 346 (397)
T 2zzr_A 307 TATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLRSLIEQY 346 (397)
T ss_dssp HHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHHHH
Confidence 66777888889998886 67 9999988887777654
No 7
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=98.15 E-value=0.00013 Score=65.70 Aligned_cols=232 Identities=13% Similarity=0.053 Sum_probs=134.8
Q ss_pred HH-HHHHHHHHHHcCChHHHHHHHHHHhhcc--CCCCCCcccccchHHHHHHHHHHhhhhCCCcCcHHHHHHHHHHHHHh
Q 022382 15 GV-CALGAVLAKHAGDERLLDHYLTKFKEIK--LPSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKA 91 (298)
Q Consensus 15 Gi-~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~G~aGil~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~ 91 (298)
|+ +..+..+|+.+||+++.+.+.+.++... -....+.| .+..| .++..+++.+++++|+ +.+.++++.++..
T Consensus 71 G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~~~~~~~~~n~D--~~~~~--~~l~~lY~~Tgd~~Yl-~~a~~~ad~L~~~ 145 (382)
T 3pmm_A 71 GVGLYGIYQYYQQTGDIEMRDIIDRWFADRFAEGATTKNVN--TMAPF--LTLAYRFEETGRMAYL-PWLESWAEWAMHE 145 (382)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCTT--TTTTH--HHHHHHHHHHCCGGGH-HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHcCCCCcCccc--chHHH--HHHHHHHHHhCCHHHH-HHHHHHHHHHHhh
Confidence 53 4555668999999999998888776541 01111222 23333 3668999999999998 4888888888764
Q ss_pred cHhhhhcCCCCcceeecCccccccccchHHHHHHHhcCCCC---CchHHHHHHHHHHHHHccC--CCCCCCCCC---CCC
Q 022382 92 GRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELK---PDEVEDVKGTLRYMIKNRF--PSGNYPSSE---GSE 163 (298)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~---~~~~~~i~~~l~~~~~~~~--~~g~w~~~~---~~~ 163 (298)
.....++......+.+. ...-=...|+.-.+.+|+++++. +++.+.+.+-+....++.+ ++|.|.... ...
T Consensus 146 ~~r~~~Ggf~~~~~~~~-~~~~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~~l~D~~tGl~~h~~~~~~~~ 224 (382)
T 3pmm_A 146 MPRTEQGGMQHMTLAEE-NHQQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHVQNLMDRETGLWFHGWNYEGRH 224 (382)
T ss_dssp SCBCGGGCBCCCCSSCC-CTTEEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTTSCBCSEEETTTTB
T ss_pred CCCCcCCCeeeecCCCC-CCCcEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHccCCCCCCeeeeccCCCCC
Confidence 32221111000000000 00111346665566677777753 3456655444444444444 356554321 111
Q ss_pred CCcccccccCchhHHHHHHHHHHHh-------CcHHHHHHHHHHHHHHHHh----cC----CCCCcc---ccchhhHHHH
Q 022382 164 SDRLVHWCHGAPGVTLTLAKAAEVF-------GEKEFLQAAVDAGEVVWKR----GL----LKRVGI---CHGISGNTYV 225 (298)
Q Consensus 164 ~~~~~~wChG~~Gi~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~----~~----~~~~~l---CHG~aG~~~~ 225 (298)
......|+.|..=.+.++...++.+ +++++.+.+++..+.+.+. ++ ..++.- --|++..+..
T Consensus 225 ~~~~~~WaRG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q~~~G~W~~~~d~~~~y~EsSatA~~ay~ 304 (382)
T 3pmm_A 225 NFARARWARGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQDDSGLWHTLLDDPHSYLEASATAGFAYG 304 (382)
T ss_dssp CTTCCCBHHHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHCCTTSCEESBTTCTTSCEEHHHHHHHHHH
T ss_pred CCCcceecccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHcCCCCCChhhccCCCCCCccccHHHHHHHH
Confidence 1235679999999999999999873 2456777777777776553 22 112221 2245555566
Q ss_pred HHHHHH--HhCCHHHHHHHHHHHHHHHHHH
Q 022382 226 FLSLYR--LTGNVEYLYRAKAFACFLYDRA 253 (298)
Q Consensus 226 l~~l~~--~~~~~~~~~~~~~~~~~~~~~~ 253 (298)
+++..+ .+ +++|.+.|++..+.+.+..
T Consensus 305 ll~~~~~g~l-~~~Y~~~a~ka~~~l~~~i 333 (382)
T 3pmm_A 305 ILKAVRKRYV-GQHYAGVAEKAIRGIVQNI 333 (382)
T ss_dssp HHHHHHTTSS-CGGGHHHHHHHHHHHHHTB
T ss_pred HHHHHHcCCC-cHHHHHHHHHHHHHHHhhC
Confidence 666665 23 4789999988888777654
No 8
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=98.02 E-value=0.0011 Score=59.62 Aligned_cols=230 Identities=12% Similarity=0.044 Sum_probs=131.3
Q ss_pred HHHHHHHHHHH-cCChHHHHHHHHHHhhc--c-CC----------CCCC----cccccchHHHHHHHHHHhhhhCCCcCc
Q 022382 16 VCALGAVLAKH-AGDERLLDHYLTKFKEI--K-LP----------SDLP----NELLYGRVGFLWACSFLNKHMGKDTIS 77 (298)
Q Consensus 16 i~~~l~~~~~~-~~~~~~~~~~~~~~~~~--~-~~----------~~~~----~d~~~G~aGil~~l~~l~~~~~~~~~~ 77 (298)
++++++.+|+. ++++++.+.+.+.++-+ . .. .+.. .....+.+=.++++..+++.++++++.
T Consensus 58 ~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~dg~~~~~~~~~~~~af~i~al~~~y~~tg~~~~l 137 (388)
T 2gz6_A 58 QVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDDEGNWYFALTRGGEPLVQPYNIFSDCFAAMAFSQYALASGEEWAK 137 (388)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCTTSCBCSEECTTSCBCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcccCCcchHHHHHHHHHHHHHHHHhCCHHHH
Confidence 56777888998 89999988888766544 1 11 1111 123334455677778888999998876
Q ss_pred HHHHHHHHHHHHHhcHhhhhcCCCCcceeecC-ccccccccchHHHHHHHhcCCCCC---chHHHHHHHHHHHHHccC--
Q 022382 78 TAQMRAVVDEIIKAGRRLANRGRCPLMYEWHG-KKYWGAAHGLAGIMHVLMDMELKP---DEVEDVKGTLRYMIKNRF-- 151 (298)
Q Consensus 78 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~G~aHG~aGi~~~L~~~~~~~---~~~~~i~~~l~~~~~~~~-- 151 (298)
+.+.++++.+++..... ...... .+.+ ...-| .-..+=.+.+++.+++.+ .+++.++++++.+.+...
T Consensus 138 -~~A~~~~~~i~~~~~d~--~g~~~~--~~~~~~~~~~-~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~~~~~~ 211 (388)
T 2gz6_A 138 -DVAMQAYNNVLRRKDNP--KGKYTK--TYPGTRPMKA-LAVPMILANLTLEMEWLLPQETLENVLAATVQEVMGDFLDQ 211 (388)
T ss_dssp -HHHHHHHHHHHTC------------------CCCCEE-THHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHTTEET
T ss_pred -HHHHHHHHHHHHHhcCC--CcccCc--ccCCCCCCCC-CCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcc
Confidence 47777777777654210 000000 0100 01112 112223444567777643 357788888887765322
Q ss_pred CCCCC-CCCCCCCCC---cccccccCchh----HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCCC-Ccccc-----
Q 022382 152 PSGNY-PSSEGSESD---RLVHWCHGAPG----VTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKR-VGICH----- 217 (298)
Q Consensus 152 ~~g~w-~~~~~~~~~---~~~~wChG~~G----i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lCH----- 217 (298)
+.|.. +....+... ..... =.|| .+..++.+.+.++|+++.+.+++.++..++.+...+ .+++|
T Consensus 212 ~~g~~~e~~~~~w~~~~~~~~~~--~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~~g~d~~~Gg~~~~~~~~ 289 (388)
T 2gz6_A 212 EQGLMYENVAPDGSHIDCFEGRL--INPGHGIEAMWFIMDIARRKNDSKTINQAVDVVLNILNFAWDNEYGGLYYFMDAA 289 (388)
T ss_dssp TTTEECSEECTTSCCCCSTTTTE--ECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTTCSBCSCEETT
T ss_pred CCCeEEEEECCCCCCCCCcccCc--CCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhccCCCCCEEEeecCC
Confidence 23321 100000000 00000 1233 455688888899999999999999888877654322 34444
Q ss_pred ch---------------hhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 022382 218 GI---------------SGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRA 253 (298)
Q Consensus 218 G~---------------aG~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 253 (298)
|. +=.+..++.+++.|++++|++.+.++.+++....
T Consensus 290 g~~~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~~~~~~~~ 340 (388)
T 2gz6_A 290 GHPPQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHDYSWQHF 340 (388)
T ss_dssp SCCCSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 21 1134556678999999999999988887776654
No 9
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.93 E-value=0.0011 Score=58.84 Aligned_cols=234 Identities=13% Similarity=0.009 Sum_probs=136.8
Q ss_pred chHHHHHHHHHHHHcCChHHHHHHHHHHhhccCCCC--CCcccccchHHHHHHHHHHhhhhCCCcCcHHHHHHHHHHHH-
Q 022382 13 RAGVCALGAVLAKHAGDERLLDHYLTKFKEIKLPSD--LPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEII- 89 (298)
Q Consensus 13 ~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~G~aGil~~l~~l~~~~~~~~~~~~~~~~~~~~l~- 89 (298)
.+|.+-.+...|+.+||++|.+.+.+.++.+...+. ...++..=.+=.+++++..++.+++++++ +.+.++.+.++
T Consensus 48 ~a~~~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~~~~~~~~~~~DD~a~~~la~~~aye~t~~~~yL-~~A~~l~~~l~~ 126 (349)
T 3k7x_A 48 LAHLVEVRLDAYLRTKKQADLEVAEKTYLHNKNRNGGTLIHDFYDDMLWNALAAYRLYKATGKSIYL-EDAQLVWQDLVD 126 (349)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTSSSCCSBHHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCCCCCccCccHHHHHHHHHHHHHHHHCCchHH-HHHHHHHHHHHH
Confidence 355556667788999999999888887664411111 01112221122457889999999998887 47777777773
Q ss_pred HhcHhhhhcCCCCcceeecCccccccccchHHHHHHHhcCCCC---CchHHHHHHHHHHHHHccC-CCCCCCCCCC---C
Q 022382 90 KAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELK---PDEVEDVKGTLRYMIKNRF-PSGNYPSSEG---S 162 (298)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~---~~~~~~i~~~l~~~~~~~~-~~g~w~~~~~---~ 162 (298)
..-... . ..-+.|......+.+ +-+.+-.+.+++++++. +.+++.+++.++|+.+..+ ++|...+... +
T Consensus 127 ~~wd~~-~--gGGi~W~~~~~~~kn-aisN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~~ 202 (349)
T 3k7x_A 127 TGWNDI-M--GGGFAWRRPQMYYKN-TPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQTKVLVREDGFVEDGINRLED 202 (349)
T ss_dssp HTBCSG-G--GSCBEEETTEEEEEE-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHBCTTSCBCCEECTTSS
T ss_pred hCCCCC-C--CCceEecCCCccccc-hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCCCCCeEecCCccCCC
Confidence 322110 0 111222211111111 22667777888888753 4578999999999987544 3444333211 1
Q ss_pred CCC-cccccccCchhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh----cCCCCCccccch--hhHHHH---HHHHHHH
Q 022382 163 ESD-RLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKR----GLLKRVGICHGI--SGNTYV---FLSLYRL 232 (298)
Q Consensus 163 ~~~-~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~lCHG~--aG~~~~---l~~l~~~ 232 (298)
... ....|-++..=++.++..++++++|+++++.+++.++.+.+. +.....+ |.|+ +....+ |..+.+.
T Consensus 203 g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~~~~~~~f~~~gi~~~~~-~~~D~~sFkgi~~r~L~~l~~~ 281 (349)
T 3k7x_A 203 GTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTAAISLKELTEDGIFKDEG-NGGDEGLFKGIFYRYFTDLIEE 281 (349)
T ss_dssp SCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEETTEECCCC-SSSGGGGHHHHHHHHHHHHHHH
T ss_pred CccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHhccCCcccCCC-CCccHHHHHHHHHHHHHHHHHH
Confidence 111 113566666557778999999999999999999988776543 2222221 4344 333333 3345666
Q ss_pred hCCHHHHHHHHHHHHHHHHH
Q 022382 233 TGNVEYLYRAKAFACFLYDR 252 (298)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~ 252 (298)
++++.++.....-++.+...
T Consensus 282 ~p~~~~~~~l~~sa~aa~~~ 301 (349)
T 3k7x_A 282 TANKTYRDFVLNSCQILVEN 301 (349)
T ss_dssp HTCHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHh
Confidence 77877766665555555544
No 10
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=97.82 E-value=0.00055 Score=61.69 Aligned_cols=215 Identities=13% Similarity=0.065 Sum_probs=128.3
Q ss_pred Ccccccch-HHHHHHHHHHhhhhCCCcCcHHHHHHHHHHHHHhcHhhhhcCCCCcceeecCccccccccch-HHHHHHHh
Q 022382 50 PNELLYGR-VGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGL-AGIMHVLM 127 (298)
Q Consensus 50 ~~d~~~G~-aGil~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~-aGi~~~L~ 127 (298)
+.|..+|. .|.++ .+++.++|++++ +.+++..+.+.+... .+ .. .+...+||.-.. .|.++-
T Consensus 65 ~~~Wt~GF~~G~lw---~~ye~Tgd~~~~-~~a~~~~~~l~~~~~---~~--~~-----~~~HD~GF~~~~s~~~~y~-- 128 (397)
T 2zzr_A 65 NTEWTNGFWTGCLW---LAYEYNQDKKLK-NIAHKNVLSFLNRIN---NR--IA-----LDHHDLGFLYTPSCTAEYR-- 128 (397)
T ss_dssp SCSSCHHHHHHHHH---HHHHHHCCHHHH-HHHHHHHHHHHHHHH---TT--CS-----CCSSTHHHHHTTTHHHHHH--
T ss_pred CCccCcchHHHHHH---HHHHHHCCHHHH-HHHHHHHHHHHHhhh---hc--cc-----CCCCCchHHHHHHHHHHHH--
Confidence 45677775 67766 566788888776 355555555554321 11 00 011235554443 222222
Q ss_pred cCCCCCchHHHHHHHHHHHHHccC-CC-C---CCCCCCCCCCCcccccccCchhHHHHHHHHHHHhCcHHHHHHHHHHHH
Q 022382 128 DMELKPDEVEDVKGTLRYMIKNRF-PS-G---NYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGE 202 (298)
Q Consensus 128 ~~~~~~~~~~~i~~~l~~~~~~~~-~~-g---~w~~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~ 202 (298)
+...+.+.+.+.++.+++.. ++ +. | .|.... + .....-|-.... -+.+|+.++++++|++|.+.|.+..+
T Consensus 129 -ltg~~~~~~~~~~aA~~L~~-r~~~~~g~iqsw~~~~-~-~~~~~~iID~~m-ni~~L~~A~~~~gd~~y~~~A~~ha~ 203 (397)
T 2zzr_A 129 -INGDVKALEATIKAADKLME-RYQEKGGFIQAWGELG-Y-KEHYRLIIDCLL-NIQLLFFAYEQTGDEKYRQVAVNHFY 203 (397)
T ss_dssp -HHCCHHHHHHHHHHHHHHHT-TEETTTTEECCSSSTT-C-GGGCEEETTHHH-HTHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred -HhCCHHHHHHHHHHHHHHHH-HhCcCCCEEEecccCC-C-CCCCceeechHh-HHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 22234577888888888874 55 33 3 253211 0 011122333333 23467777889999999999998877
Q ss_pred HHHHhcC----------------------------CCCCccccchhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Q 022382 203 VVWKRGL----------------------------LKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQ 254 (298)
Q Consensus 203 ~~~~~~~----------------------------~~~~~lCHG~aG~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (298)
.+.+.-+ ..+.+|.+|.|-.+..+..+|+.|+|++|++.|.++.+++++..+
T Consensus 204 ~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~~ 283 (397)
T 2zzr_A 204 ASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLP 283 (397)
T ss_dssp HHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhH
Confidence 6654321 123468888899999999999999999999999999888888753
Q ss_pred hhh---hccC---CCCCCCccccccchHHHHHHHHHccCC
Q 022382 255 KLI---AEGK---MHGGDRPYSLFEGIGGMTHLFLDMIEP 288 (298)
Q Consensus 255 ~~~---~~g~---~~~~~~~~gl~~G~sGi~~~Ll~~~~~ 288 (298)
+.. ..-. .+....+ -+|.|..+..|+++..-
T Consensus 284 ~d~~pywdt~~~~~~~~~~D---~Sa~aiaA~~Ll~L~~~ 320 (397)
T 2zzr_A 284 EDKVSYWDLIFTDGSGQPRD---TSATATAVCGIHEMLKY 320 (397)
T ss_dssp TTSCCBSBTTCCTTSCCCBC---HHHHHHHHHHHHHHHTT
T ss_pred HhCCccccCCCCCCCCCcCC---CCHHHHHHHHHHHHHHh
Confidence 210 0000 0101112 46778888888888653
No 11
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=97.62 E-value=0.002 Score=57.69 Aligned_cols=213 Identities=14% Similarity=0.075 Sum_probs=126.1
Q ss_pred Ccccccch-HHHHHHHHHHhhhhCCCcCcHHHHHHHHHHHHHhcHhhhhcCCCCcceeecCcccccc-ccchHHHHHH--
Q 022382 50 PNELLYGR-VGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGA-AHGLAGIMHV-- 125 (298)
Q Consensus 50 ~~d~~~G~-aGil~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~-aHG~aGi~~~-- 125 (298)
+.|..+|. .|.++ .+++.++|++++ +.+++..+.+.+... ++ ... .|- -|.++.
T Consensus 39 ~~~Wt~GF~~g~lw---~~ye~Tgd~~~~-~~a~~~~~~l~~~~~---~~--------------~~~~~HD-~Gf~~~~s 96 (377)
T 2ahf_A 39 NTDWTDGFWSGILW---LCYEYTGDEQYR-EGAVRTVASFRERLD---RF--------------ENLDHHN-IGFLYSLS 96 (377)
T ss_dssp SCSSCHHHHHHHHH---HHHHHHCCHHHH-HHHHHHHHHHHHHHT---TT--------------TTCCBST-HHHHHHTT
T ss_pred CCccCcchHHHHHH---HHHHHhCCHHHH-HHHHHHHHHHHHhhh---cc--------------cCCCCCC-chHhhHHH
Confidence 35677775 66666 566788887766 355555555544321 00 011 122 234332
Q ss_pred HhcCCC---CCchHHHHHHHHHHHHHccC-CC-C---CCCCCCCCCCCcccccccCchhHHHHHHHHHHHhCcHHHHHHH
Q 022382 126 LMDMEL---KPDEVEDVKGTLRYMIKNRF-PS-G---NYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAA 197 (298)
Q Consensus 126 L~~~~~---~~~~~~~i~~~l~~~~~~~~-~~-g---~w~~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~~ 197 (298)
+...++ .+++.+.+.++.+++.. ++ +. | .|....... ....-|-.-.-- +.+|..+++.++|++|.+.|
T Consensus 97 ~~~~y~ltg~~~~~~~~~~aA~~L~~-r~~~~~g~i~sw~~~~~~~-~~~~~iID~mmn-i~~L~~A~~~~gd~~y~~~A 173 (377)
T 2ahf_A 97 AKAQWIVEKDESARKLALDAADVLMR-RWRADAGIIQAWGPKGDPE-NGGRIIIDCLLN-LPLLLWAGEQTGDPEYRRVA 173 (377)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHT-TEETTTTEECCBSSTTCTT-TTTEEEGGGGGG-HHHHHHHHHHHCCTHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHH-hCCCCCCeEEeccCCCCCC-CCceEEechHHH-HHHHHHHHHHhCCHHHHHHH
Confidence 222332 34577888888888774 55 33 3 253211010 001112111112 45788889999999999999
Q ss_pred HHHHHHHHHhcC----------------------------CCCCccccchhhHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 022382 198 VDAGEVVWKRGL----------------------------LKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFL 249 (298)
Q Consensus 198 ~~~~~~~~~~~~----------------------------~~~~~lCHG~aG~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 249 (298)
.+..+.+.+.-+ ..+.+|.+|.+-.+..++.+++.|++++|++.|.++.+++
T Consensus 174 ~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~ 253 (377)
T 2ahf_A 174 EAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHF 253 (377)
T ss_dssp HHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHH
Confidence 998777655321 1235888999999999999999999999999999998888
Q ss_pred HHHHhhhhhccC---CCCCCCccccccchHHHHHHHHHccC
Q 022382 250 YDRAQKLIAEGK---MHGGDRPYSLFEGIGGMTHLFLDMIE 287 (298)
Q Consensus 250 ~~~~~~~~~~g~---~~~~~~~~gl~~G~sGi~~~Ll~~~~ 287 (298)
++..++...+=+ .+.....+---++.|..+..|+++..
T Consensus 254 l~~~~~d~~pywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~ 294 (377)
T 2ahf_A 254 LARVPEDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIAS 294 (377)
T ss_dssp HTTCCTTSSCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHH
T ss_pred HHhhHHhCCcccccCCCccCCCccCCCHHHHHHHHHHHHHH
Confidence 886532100000 01010111224678888888888764
No 12
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.48 E-value=0.0036 Score=56.25 Aligned_cols=209 Identities=13% Similarity=0.051 Sum_probs=124.1
Q ss_pred cccchHHHHHHHHHHhhhhCCCcCcHHHHHHHHHHHHHhcHhhhhcCCCCcceeecCccccccccchHHHHHHHhcCCC-
Q 022382 53 LLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMEL- 131 (298)
Q Consensus 53 ~~~G~aGil~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~- 131 (298)
+.+|. .+.++..+++.++|+++. +.+++..+.+++. + .+. ...-.+..|. .|..+|+
T Consensus 68 Wt~G~--~~~gl~~~ye~Tgd~~y~-~~a~~~~~~~~~~------~--~~~---------~n~D~~~~~~--~l~~lY~~ 125 (382)
T 3pmm_A 68 WTHGV--GLYGIYQYYQQTGDIEMR-DIIDRWFADRFAE------G--ATT---------KNVNTMAPFL--TLAYRFEE 125 (382)
T ss_dssp HHHHH--HHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHH------C--CCC---------CCTTTTTTHH--HHHHHHHH
T ss_pred ccHHH--HHHHHHHHHHHHCCHHHH-HHHHHHHHHHHcC------C--CCc---------CcccchHHHH--HHHHHHHH
Confidence 44444 355667888999998887 3666666655432 1 111 0111233332 3445553
Q ss_pred --CCchHHHHHHHHHHHHHccC--CCCC-CCCCCCCCCCcccccccCchhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 022382 132 --KPDEVEDVKGTLRYMIKNRF--PSGN-YPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWK 206 (298)
Q Consensus 132 --~~~~~~~i~~~l~~~~~~~~--~~g~-w~~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (298)
.+.+++.+.+..+++.+... ++|. |.... .......-||.|.--....++.+++.++|++|.+.|.+-.....+
T Consensus 126 Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~~-~~~~~~~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~ 204 (382)
T 3pmm_A 126 TGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTL-AEENHQQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHVQ 204 (382)
T ss_dssp HCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCCS-SCCCTTEEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeecC-CCCCCCcEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 45688999988888875432 3443 44321 111223569998776667788999999999999988765554443
Q ss_pred h------cC------------CCCCccccchhhHHHHHHHHHHHh-------CCHHHHHHHHHHHHHHHHHHhhhhhcc-
Q 022382 207 R------GL------------LKRVGICHGISGNTYVFLSLYRLT-------GNVEYLYRAKAFACFLYDRAQKLIAEG- 260 (298)
Q Consensus 207 ~------~~------------~~~~~lCHG~aG~~~~l~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~g- 260 (298)
. ++ .....|+.|.+=.+..+..+++.+ +++.+++.++++++.+++...+ +|
T Consensus 205 ~l~D~~tGl~~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q~~---~G~ 281 (382)
T 3pmm_A 205 NLMDRETGLWFHGWNYEGRHNFARARWARGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQDD---SGL 281 (382)
T ss_dssp HHBCTTTSCBCSEEETTTTBCTTCCCBHHHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHCCT---TSC
T ss_pred HccCCCCCCeeeeccCCCCCCCCcceecccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHcCCC---CCC
Confidence 2 22 123667778777777777777763 2355666666666666655322 22
Q ss_pred CCCCCC--CccccccchHHHHHHHHHccC
Q 022382 261 KMHGGD--RPYSLFEGIGGMTHLFLDMIE 287 (298)
Q Consensus 261 ~~~~~~--~~~gl~~G~sGi~~~Ll~~~~ 287 (298)
|....+ .++-=-+|.|.++++|++..+
T Consensus 282 W~~~~d~~~~y~EsSatA~~ay~ll~~~~ 310 (382)
T 3pmm_A 282 WHTLLDDPHSYLEASATAGFAYGILKAVR 310 (382)
T ss_dssp EESBTTCTTSCEEHHHHHHHHHHHHHHHH
T ss_pred hhhccCCCCCCccccHHHHHHHHHHHHHH
Confidence 111111 133345688899999888664
No 13
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.39 E-value=0.0023 Score=56.83 Aligned_cols=176 Identities=11% Similarity=-0.057 Sum_probs=108.1
Q ss_pred hHHHHHHHHHHhhhhCCCcCcHHHHHHHHHHHHHhcHhhhhcCCCCcceeecCccccccccchHHHHHHHhcCCCC---C
Q 022382 57 RVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELK---P 133 (298)
Q Consensus 57 ~aGil~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~---~ 133 (298)
.+|.+-+|...++.+++++|. +.+.+..+.+... .....+ .++.|=.+=.+.+++++++. +
T Consensus 48 ~a~~~~~l~d~~~~tgd~~y~-~~a~~~~~~~~~~-----~~~~~~----------~~~~DD~a~~~la~~~aye~t~~~ 111 (349)
T 3k7x_A 48 LAHLVEVRLDAYLRTKKQADL-EVAEKTYLHNKNR-----NGGTLI----------HDFYDDMLWNALAAYRLYKATGKS 111 (349)
T ss_dssp HHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHH-----TTSSSC----------CSBHHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHHHHhCCHHHH-HHHHHHHHHHHhc-----CCCCCC----------ccCccHHHHHHHHHHHHHHHHCCc
Confidence 467777888899999998876 3666666555432 111111 12333333345677777753 4
Q ss_pred chHHHHHHHHHHHHHccC-C--CCC--CCCCCCCCCCcccccccCchhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc
Q 022382 134 DEVEDVKGTLRYMIKNRF-P--SGN--YPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRG 208 (298)
Q Consensus 134 ~~~~~i~~~l~~~~~~~~-~--~g~--w~~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (298)
.+++.+++..+++...++ + .|. |.... .. .. .+-+..-.+..++++++.++|++|.+.|+++.+.+.+.-
T Consensus 112 ~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~~~---~~-~k-naisN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~~l 186 (349)
T 3k7x_A 112 IYLEDAQLVWQDLVDTGWNDIMGGGFAWRRPQ---MY-YK-NTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQTKVL 186 (349)
T ss_dssp HHHHHHHHHHHHHHHHTBCSGGGSCBEEETTE---EE-EE-EHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCceEecCCC---cc-cc-chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC
Confidence 578888888888843344 2 232 43211 01 11 112455566677888999999999999999988775421
Q ss_pred CCCCCc---------ccc---------chhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 022382 209 LLKRVG---------ICH---------GISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRA 253 (298)
Q Consensus 209 ~~~~~~---------lCH---------G~aG~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 253 (298)
...+.. -|. +.+=.+.-+..+|+.|+|++|++++.++++.+++..
T Consensus 187 ~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~~~~~~~f 249 (349)
T 3k7x_A 187 VREDGFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTAAISLKEL 249 (349)
T ss_dssp BCTTSCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHh
Confidence 100000 011 112256667788999999999999999988877654
No 14
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.33 E-value=0.0052 Score=55.04 Aligned_cols=229 Identities=11% Similarity=-0.009 Sum_probs=123.1
Q ss_pred hHH-HHHHHHHHHHcCChHHHHHHHHHHhhccCCC------CCCcccccchHHHHHHHHHHhhhhCCCcCcHHHHHHHHH
Q 022382 14 AGV-CALGAVLAKHAGDERLLDHYLTKFKEIKLPS------DLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVD 86 (298)
Q Consensus 14 ~Gi-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~d~~~G~aGil~~l~~l~~~~~~~~~~~~~~~~~~~ 86 (298)
-|+ ...+..+|+.+||+++.+.+.+.++.+.-.+ ....|-.. ++.+++.+++.+++++++ +.+.++++
T Consensus 43 ~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~~~~g~l~~~~~~lDd~~----~g~~ll~lY~~Tgd~~yl-~~a~~la~ 117 (373)
T 1nc5_A 43 QGVFLCGVLRLWEATGEKRYFEYAKAYADLLIDDNGNLLFRRDELDAIQ----AGLILFPLYEQTKDERYV-KAAKRLRS 117 (373)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHBCTTCCBCCCTTCGGGTG----GGGGHHHHHHHHCCHHHH-HHHHHHHG
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCcccCCCCCcchHH----HHHHHHHHHHHhCCHHHH-HHHHHHHH
Confidence 454 5566778999999999999998877642111 11122111 335778889999998876 35566665
Q ss_pred HHHHhcHhhhhcCCCCcceeecCccccccccchHHHHHHHhcCCC---CCchHHHHHHHHHHHHHccC--CCCCCCCCCC
Q 022382 87 EIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMEL---KPDEVEDVKGTLRYMIKNRF--PSGNYPSSEG 161 (298)
Q Consensus 87 ~l~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~---~~~~~~~i~~~l~~~~~~~~--~~g~w~~~~~ 161 (298)
.+.... .... ... |........-...|+.-.+.+|+++++ .+++.+.+.+.+.+..+..+ ++|.|.....
T Consensus 118 ~l~~~~-r~~~---G~f-w~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~D~~tGl~~h~~~ 192 (373)
T 1nc5_A 118 LYGTLN-RTSE---GGF-WHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVLQESLMRKHTKDAKTGLFYHAWD 192 (373)
T ss_dssp GGGTSC-BCTT---SCB-CSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHHHBCTTTSCBCSEEE
T ss_pred HHHhcc-CCCC---CCe-eccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhcCCCCCCEEeecC
Confidence 553221 0000 001 100000112234566555667777765 35577777776766655444 3554432110
Q ss_pred -CC---------CCcccccccCchhHHHHHHHHHHHh-----CcHHHHHHHHHHHHHHHHh-----cCCCCCccccc---
Q 022382 162 -SE---------SDRLVHWCHGAPGVTLTLAKAAEVF-----GEKEFLQAAVDAGEVVWKR-----GLLKRVGICHG--- 218 (298)
Q Consensus 162 -~~---------~~~~~~wChG~~Gi~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~-----~~~~~~~lCHG--- 218 (298)
.. .-....|+.|..=.+.++..+++.+ +++++.+.+++..+.+.+. ++.. .-++++
T Consensus 193 ~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~~~dG~W~-~~ld~~~~~ 271 (373)
T 1nc5_A 193 EAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDKETGLWY-QIVDKGDRS 271 (373)
T ss_dssp TTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSCTTTSCCB-SBTTCTTST
T ss_pred CccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhcCCCCCcee-eecCCCCCC
Confidence 00 0012345555444555556666553 3467888888877777642 2211 123333
Q ss_pred --------hhhHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHH
Q 022382 219 --------ISGNTYVFLSLYRLT-GNVEYLYRAKAFACFLYDRA 253 (298)
Q Consensus 219 --------~aG~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~~~ 253 (298)
++.....+++..+.- -+++|++.+++..+.+.+.+
T Consensus 272 ~~~~EsSatA~~ay~l~~g~~~g~l~~~Y~~~a~k~~~~l~~~~ 315 (373)
T 1nc5_A 272 DNWLESSGSCLYMYAIAKGINKGYLDRAYETTLLKAYQGLIQHK 315 (373)
T ss_dssp TCCBCHHHHHHHHHHHHHHHHHTSSCGGGHHHHHHHHHHHHHHH
T ss_pred CCCccccHHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHhc
Confidence 244444444443321 15789999988888777753
No 15
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=97.31 E-value=0.012 Score=53.12 Aligned_cols=229 Identities=13% Similarity=0.115 Sum_probs=126.6
Q ss_pred HHHHHHHHHHc---CChHHHHHHHHHHhhc--c-CCCCC--C----c----------ccccchHHHHHHHHHHhhhhCCC
Q 022382 17 CALGAVLAKHA---GDERLLDHYLTKFKEI--K-LPSDL--P----N----------ELLYGRVGFLWACSFLNKHMGKD 74 (298)
Q Consensus 17 ~~~l~~~~~~~---~~~~~~~~~~~~~~~~--~-~~~~~--~----~----------d~~~G~aGil~~l~~l~~~~~~~ 74 (298)
++.++.+++.+ +++++.+.+.+.++-+ . ...+. . . -.+.+.+=+++++..+++.++++
T Consensus 62 l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~~~~d~~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~ 141 (402)
T 1fp3_A 62 VWMYCRLYRKLERFHRPELLDAAKAGGEFLLRHARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEA 141 (402)
T ss_dssp HHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTBSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhccCcCCCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHhCCH
Confidence 55666668876 9999888877766544 1 11110 1 0 12223566788889999999988
Q ss_pred cCcHHHHHHHHHHHHHhcHhhhhcCCCCcceeecCccccccccchHH--HH-HHHhc---CCCCC--chHHHHHHHHHHH
Q 022382 75 TISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAG--IM-HVLMD---MELKP--DEVEDVKGTLRYM 146 (298)
Q Consensus 75 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aG--i~-~~L~~---~~~~~--~~~~~i~~~l~~~ 146 (298)
++. +.+.++.+.+++.......+...+. +.. ..-..+.++ +. -+++. ++... .+.+.+++.++..
T Consensus 142 ~~~-~~A~~l~~~~~~~~~d~~~G~f~~~---~~~---~~~~~~~~~~m~~~~~~l~l~~l~~~~~~~~~~~a~~~~~~~ 214 (402)
T 1fp3_A 142 RYQ-SEAVDMMDQIVHWVREDPSGLGRPQ---LPG---AVASESMAVPMMLLCLVEQLGEEDEELAGRYAQLGHWCARRI 214 (402)
T ss_dssp HHH-HHHHHHHHHHHHHHHTCGGGGCCCC---CTT---SCCEEETHHHHHHHHHHHHHHTTCHHHHHHTHHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHhccCCCcccCcc---ccC---ccCCCCcchHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 776 4667777777665421111100000 000 000111122 11 12333 44321 2556777777766
Q ss_pred HHccC--CCCC-CCCCCCCCCCcccccc--cCchh----HHHHHHHHHHHhCcHHHHHHHHHHHHHH-HHhcCCCC-Ccc
Q 022382 147 IKNRF--PSGN-YPSSEGSESDRLVHWC--HGAPG----VTLTLAKAAEVFGEKEFLQAAVDAGEVV-WKRGLLKR-VGI 215 (298)
Q Consensus 147 ~~~~~--~~g~-w~~~~~~~~~~~~~wC--hG~~G----i~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~l 215 (298)
.+. + +.+. ++....+ ....+.+. .=.|| .+..++.++++++++++.+.|+++.+.+ .+.+...+ .++
T Consensus 215 ~~~-~~~~~~~~~e~~d~d-w~~~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~~~~l~~A~~~~~~~~~~~~~d~~~gg~ 292 (402)
T 1fp3_A 215 LQH-VQRDGQAVLENVSED-GEELSGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPFRSGWDADHGGL 292 (402)
T ss_dssp HTT-EETTTTEECSEEETT-SCBCCHHHHHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTHHHHHHHBCTTTCSB
T ss_pred HHH-hCcCCCeEEEEECCC-CCccCCCCCCCCCCCcHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHhccCCCCCE
Confidence 554 4 1222 1110000 00011111 01355 3335788888899999999999988888 76654322 344
Q ss_pred cc-----chh---------------hHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Q 022382 216 CH-----GIS---------------GNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQ 254 (298)
Q Consensus 216 CH-----G~a---------------G~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (298)
+| |.. =.+..++.+|+.|++++|++.+.++.+.+.....
T Consensus 293 ~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~~~~~~~~~~f~ 351 (402)
T 1fp3_A 293 FYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVAEYTFRQFR 351 (402)
T ss_dssp CSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTB
T ss_pred EEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCc
Confidence 43 321 1166778899999999999999988887777653
No 16
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=97.01 E-value=0.015 Score=51.97 Aligned_cols=187 Identities=12% Similarity=0.128 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHhhc--cCCCCCC--------cccccch---HHHHHHHHHHhhhhCCCcCcHHHHH
Q 022382 16 VCALGAVLAKHAGDERLLDHYLTKFKEI--KLPSDLP--------NELLYGR---VGFLWACSFLNKHMGKDTISTAQMR 82 (298)
Q Consensus 16 i~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--------~d~~~G~---aGil~~l~~l~~~~~~~~~~~~~~~ 82 (298)
.++.+..+|+.++++++++.|.+.++.+ .+.++.. .+..-|. +=.+.+++.+++.++++++. +.+.
T Consensus 120 ~i~al~~~y~~tg~~~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~all~l~~~t~d~~~~-~~A~ 198 (388)
T 2gz6_A 120 AAMAFSQYALASGEEWAKDVAMQAYNNVLRRKDNPKGKYTKTYPGTRPMKALAVPMILANLTLEMEWLLPQETLE-NVLA 198 (388)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHTC--------------CCCCEETHHHHHHHHHHHHTGGGSCHHHHH-HHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccCcccCCCCCCCCCCHHHHHHHHHHHHHHHcCCHHHH-HHHH
Confidence 3555667789999999999999887765 1111000 0112232 33445678889999887766 4677
Q ss_pred HHHHHHHHhcHhhhhcCCCCcce--eecC---c--cccccccchHHHHHHHhcCCC-C--CchHHHHHHHHHHHHHccC-
Q 022382 83 AVVDEIIKAGRRLANRGRCPLMY--EWHG---K--KYWGAAHGLAGIMHVLMDMEL-K--PDEVEDVKGTLRYMIKNRF- 151 (298)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~--~~~~---~--~~~G~aHG~aGi~~~L~~~~~-~--~~~~~~i~~~l~~~~~~~~- 151 (298)
++++.+.+.......+ .-+..+ .|.. . ...-.+|.+ -.++.|+++++ . +.+++.+++.+++..+...
T Consensus 199 ~~~~~~~~~~~~~~~g-~~~e~~~~~w~~~~~~~~~~~~pgh~~-e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~~g~d 276 (388)
T 2gz6_A 199 ATVQEVMGDFLDQEQG-LMYENVAPDGSHIDCFEGRLINPGHGI-EAMWFIMDIARRKNDSKTINQAVDVVLNILNFAWD 276 (388)
T ss_dssp HHHHHHHHTTEETTTT-EECSEECTTSCCCCSTTTTEECHHHHH-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBC
T ss_pred HHHHHHHHHHhccCCC-eEEEEECCCCCCCCCcccCcCCCCHHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcc
Confidence 7777776653211100 000000 0110 0 011112222 34455666654 2 3467888888888776544
Q ss_pred CC-CCCCCCC-CCCC-------CcccccccCchhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh
Q 022382 152 PS-GNYPSSE-GSES-------DRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKR 207 (298)
Q Consensus 152 ~~-g~w~~~~-~~~~-------~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (298)
++ |.+.... .+.. +....|.+ +=.+.+++.+++.++|++|.+.++++.+.+++.
T Consensus 277 ~~~Gg~~~~~~~~g~~~~~~~~~~~~~W~q--ae~i~a~~~ly~~tgd~~yl~~a~~~~~~~~~~ 339 (388)
T 2gz6_A 277 NEYGGLYYFMDAAGHPPQQLEWDQKLWWVH--LESLVALAMGYRLTGRDACWAWYQKMHDYSWQH 339 (388)
T ss_dssp TTTCSBCSCEETTSCCCSCTTTTCEEHHHH--HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEeecCCCCccccCcCCCcCcHHH--HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 22 4322111 0111 11223433 233456777889999999999999988877654
No 17
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=96.97 E-value=0.14 Score=46.14 Aligned_cols=231 Identities=11% Similarity=-0.025 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHhhc--cC-CCC-C---------C----cccccchHHHHHHHHHHhhhhCCCcCcH
Q 022382 16 VCALGAVLAKHAGDERLLDHYLTKFKEI--KL-PSD-L---------P----NELLYGRVGFLWACSFLNKHMGKDTIST 78 (298)
Q Consensus 16 i~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~-~---------~----~d~~~G~aGil~~l~~l~~~~~~~~~~~ 78 (298)
++++++..|+.++++++.+.+.+.++-+ .+ ..+ . . .-.+...|=+++++.. +..++++++.
T Consensus 57 ~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG~~~~~~~~lyd~Af~i~al~~-~~~tgd~~~l- 134 (402)
T 3gt5_A 57 FVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSC-GLKVGIKQAR- 134 (402)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHHTTCTTHH-
T ss_pred HHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCCCCCcCCcchHHHHHHHHHHHH-HHHhCChhHH-
Confidence 5778888899999999998888766543 11 111 1 0 1133444555667777 5678888876
Q ss_pred HHHHHHHHHHHHhcHhhhhcCCCCcce-eecCccccccccchHH---HHHHHhcCCCC---CchHHHHHHHHHHHHHccC
Q 022382 79 AQMRAVVDEIIKAGRRLANRGRCPLMY-EWHGKKYWGAAHGLAG---IMHVLMDMELK---PDEVEDVKGTLRYMIKNRF 151 (298)
Q Consensus 79 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~G~aHG~aG---i~~~L~~~~~~---~~~~~~i~~~l~~~~~~~~ 151 (298)
+.+.++.+.+.+.......+ ..+ ++.....+.-.-+... ++-+++++++. +.+.+.++++++.+.+...
T Consensus 135 ~~A~~l~~~i~~~f~d~~~G----~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~tgd~~~~~~a~~l~~~~~~~f~ 210 (402)
T 3gt5_A 135 EWMDETWCLLERHFWDAEYG----LYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASGEQRYLERALVLADRITRRQA 210 (402)
T ss_dssp HHHHHHHHHHHHHTEETTTT----EECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHhcCCcCC----CchhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhh
Confidence 47777777777653211000 100 0110000000112333 23346666643 3467888888876654222
Q ss_pred -C-CCCCCCCCCCCCCccccc--------c---cCchhH----HHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCC---
Q 022382 152 -P-SGNYPSSEGSESDRLVHW--------C---HGAPGV----TLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLK--- 211 (298)
Q Consensus 152 -~-~g~w~~~~~~~~~~~~~w--------C---hG~~Gi----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 211 (298)
+ +|..+............+ . .=.||- +..++.+++.++++.+.+.|++..+...+.+...
T Consensus 211 ~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~~~~~~~gwd~~~G 290 (402)
T 3gt5_A 211 AKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVARSWDAVRG 290 (402)
T ss_dssp HTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHHHHHHHHBCTTTC
T ss_pred CccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhcccCCCC
Confidence 2 232111000000000000 0 123454 3356777888999999999999887776543311
Q ss_pred ----------------CCccccchhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Q 022382 212 ----------------RVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQ 254 (298)
Q Consensus 212 ----------------~~~lCHG~aG~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (298)
...|+|.-+ +..++.+++.|+|++|++.+.++.+++.....
T Consensus 291 g~~~~~d~~g~~~~~~k~~W~qaEa--l~a~l~ly~~tgd~~yl~~a~~~~~~~~~~~~ 347 (402)
T 3gt5_A 291 GLCYGFAPDGTICDDDKYFWVQAES--LAAAALLATRSGDERYWQWYDRLWAYAWQHMV 347 (402)
T ss_dssp SBCSEECTTSCEEECCEEHHHHHHH--HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTB
T ss_pred cEEEEEcCCCCeeeCCcceeHHHHH--HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCc
Confidence 123444432 33467789999999999999888777766543
No 18
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=96.85 E-value=0.038 Score=50.19 Aligned_cols=231 Identities=12% Similarity=0.045 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHhhcc--C-CCC-CC----c---------ccccchHHHHHHHHHHhhhhCCCcCcH
Q 022382 16 VCALGAVLAKHAGDERLLDHYLTKFKEIK--L-PSD-LP----N---------ELLYGRVGFLWACSFLNKHMGKDTIST 78 (298)
Q Consensus 16 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~-~~----~---------d~~~G~aGil~~l~~l~~~~~~~~~~~ 78 (298)
+++.++..+. +|++++.+.+.+.++-+. + +.. .. . -.+...|=+++++.. ++.++++.+.
T Consensus 56 ~i~~~a~a~~-~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~dg~~~~~k~lyd~Af~i~al~~-~~~tg~~~~l- 132 (421)
T 2zbl_A 56 MLHVYSVAAS-MGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAAS-AVTTGHPEAR- 132 (421)
T ss_dssp HHHHHHHHHH-TTCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHTTTCTTHH-
T ss_pred HHHHHHHHHH-cCChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCCCCCcCCchhHHHHHHHHHHHHH-HHHhCCccHH-
Confidence 4666777776 999999888887766541 1 111 10 0 122234455667777 7888988776
Q ss_pred HHHHHHHHHHHHhcHhhhhcCCCCccee-ecC--ccccccccchHH---HHHHHhcCCCC---CchHHHHHHHHHHHHHc
Q 022382 79 AQMRAVVDEIIKAGRRLANRGRCPLMYE-WHG--KKYWGAAHGLAG---IMHVLMDMELK---PDEVEDVKGTLRYMIKN 149 (298)
Q Consensus 79 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~--~~~~G~aHG~aG---i~~~L~~~~~~---~~~~~~i~~~l~~~~~~ 149 (298)
+.+.++.+.+.+.......+ ..+. ... ...-+. -+..+ ++.++++++.. +++.+.++++++.+...
T Consensus 133 ~~a~~~~~~l~~~~~d~~~G----gf~~~~d~d~~~~~~~-~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~~~~~ 207 (421)
T 2zbl_A 133 KLLDYTIEVIEKYFWSEEEQ----MCLESWDEAFSQTEDY-RGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHD 207 (421)
T ss_dssp HHHHHHHHHHHHHTEETTTT----EECCEECTTSCSBCSC-EEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhccCCCC----CeeeeecCCCCccccc-CCCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 47777777777653211010 0000 000 000011 12333 35566666543 44778888888876532
Q ss_pred cCC--CCCCCCCCCCCCCccccc----ccC-------chhH----HHHHHHHHHHh---Cc--H-HHHHHHHHHHHHHHH
Q 022382 150 RFP--SGNYPSSEGSESDRLVHW----CHG-------APGV----TLTLAKAAEVF---GE--K-EFLQAAVDAGEVVWK 206 (298)
Q Consensus 150 ~~~--~g~w~~~~~~~~~~~~~w----ChG-------~~Gi----~~~l~~~~~~~---~~--~-~~~~~~~~~~~~~~~ 206 (298)
..+ .+..+............. +.+ .+|- +..++.+++++ ++ + ++.+.|++..+.+.+
T Consensus 208 ~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~ 287 (421)
T 2zbl_A 208 VARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIR 287 (421)
T ss_dssp CCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred hccCCCCchhhhcCCccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHHHHHH
Confidence 221 232111000000011111 111 3554 44677788887 45 4 899999888777765
Q ss_pred hcCCCC--Cccc-----cch-----------hhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Q 022382 207 RGLLKR--VGIC-----HGI-----------SGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQ 254 (298)
Q Consensus 207 ~~~~~~--~~lC-----HG~-----------aG~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (298)
.+...+ .+++ .|. +=.+..++.+++.|++++|++.++++.+.+.....
T Consensus 288 ~g~d~~~~GG~~~~~~~~g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~~~~~~~~~~~~ 353 (421)
T 2zbl_A 288 DAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCIKYLM 353 (421)
T ss_dssp HHBSCSSSSSBCSCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTB
T ss_pred HhcCCCCCCcEEEeecCCCCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence 443211 1222 232 22356677889999999999999888877766544
No 19
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.57 E-value=0.086 Score=48.08 Aligned_cols=233 Identities=14% Similarity=0.062 Sum_probs=130.3
Q ss_pred HH-HHHHHHHHHHcCChHHHHHHHHHHhhcc---------CCCC----------CCcccccchHHHHHHHHHHhhhhCCC
Q 022382 15 GV-CALGAVLAKHAGDERLLDHYLTKFKEIK---------LPSD----------LPNELLYGRVGFLWACSFLNKHMGKD 74 (298)
Q Consensus 15 Gi-~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~----------~~~d~~~G~aGil~~l~~l~~~~~~~ 74 (298)
|+ +..+..+|+.|||++|.+.+.+.++-+. .+.+ ...+.+.=.+.++++++.+++.++++
T Consensus 85 Gv~l~gl~~ay~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~~~~~~LDD~g~~~~~Li~lY~~T~d~ 164 (445)
T 3k11_A 85 GVTYSALIAAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQILTPHALDDAGAVCTAMIKLRLKDESL 164 (445)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHSCCSGGGTHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccchhhhhhhccCCeecccccccCCCcchhHHHHHHHHHHHHHhcCCH
Confidence 53 6667788999999999888777653210 0000 00112222466778888999999999
Q ss_pred cCcHHHHHHHHHHHHHhcHhhhhcCCCCcceeecCccccccccchHHHHHHHhcCCCC---Cc--hHHHHHHHHHHHHHc
Q 022382 75 TISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELK---PD--EVEDVKGTLRYMIKN 149 (298)
Q Consensus 75 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~---~~--~~~~i~~~l~~~~~~ 149 (298)
+++ +.+.+.+++++....+..++. . |......+--..-|+.-...+|+++++. ++ +.+.+.+=+....+.
T Consensus 165 ~yl-~~a~~~ad~L~~~~pRt~~Gg---f-~h~~~~~~q~WiD~lyM~~pfla~~~~~tgd~~~~y~d~A~~q~~~~~~~ 239 (445)
T 3k11_A 165 PVD-GLIQNYFDFIINKEYRLADGT---F-ARNRPQRNTLWLDDMFMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQFADR 239 (445)
T ss_dssp CCH-HHHHHHHHHHHHTSCBCTTCC---B-CBCSSSTTEEETHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHcCCCCCCCc---e-eecCCCCCceEecchhhHHHHHHHHHHHHCCcchHHHHHHHHHHHHHHHh
Confidence 987 488889999988654322211 0 0000000111244554456677777653 33 444433322222222
Q ss_pred cC--CCCCCCCCCC-C-CCCcccccccCchhHHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHh----cC----CCC
Q 022382 150 RF--PSGNYPSSEG-S-ESDRLVHWCHGAPGVTLTLAKAAEVFG-----EKEFLQAAVDAGEVVWKR----GL----LKR 212 (298)
Q Consensus 150 ~~--~~g~w~~~~~-~-~~~~~~~wChG~~Gi~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~----~~----~~~ 212 (298)
.+ +.|.|..... . .......|+.|..=.+.++..+++.++ .+++.+.+++..+.+.+. ++ ...
T Consensus 240 l~D~~tGL~~Hg~~~~~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~~~G~W~~vld~ 319 (445)
T 3k11_A 240 MFIPEKGLYRHGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSGEGFWHQLLDC 319 (445)
T ss_dssp HEETTTTEECSEEETTCSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCCTTSCEESBTTC
T ss_pred cccCCCCCEeeeecCCCCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCCCCCchhhccCC
Confidence 33 3565432210 1 112235799998888888888888754 456777777777766542 32 112
Q ss_pred Ccc---ccchhhHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHH
Q 022382 213 VGI---CHGISGNTYVFLSLYRL--TGNVEYLYRAKAFACFLYDR 252 (298)
Q Consensus 213 ~~l---CHG~aG~~~~l~~l~~~--~~~~~~~~~~~~~~~~~~~~ 252 (298)
+.- --|++..+..+++..+. +..+.|.+.|++..+.+.+.
T Consensus 320 ~~~y~EsSaTAmfaygllkgvr~G~Ld~~~Y~~~A~ka~~~L~~~ 364 (445)
T 3k11_A 320 NDSYLETSATAIYVYCLAHAINKGWIDAIAYGPVAQLGWHAVAGK 364 (445)
T ss_dssp TTSCEEHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence 221 22345555556665553 22246888888877777654
No 20
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=96.29 E-value=0.012 Score=53.23 Aligned_cols=133 Identities=20% Similarity=0.213 Sum_probs=85.7
Q ss_pred HHHHHHHhcCCC---CCchHHHHHHHHHHHHHccC-CC-CCCCCCCCCCCC-cccccccCchhHHHHHHHHHHHhCcHHH
Q 022382 120 AGIMHVLMDMEL---KPDEVEDVKGTLRYMIKNRF-PS-GNYPSSEGSESD-RLVHWCHGAPGVTLTLAKAAEVFGEKEF 193 (298)
Q Consensus 120 aGi~~~L~~~~~---~~~~~~~i~~~l~~~~~~~~-~~-g~w~~~~~~~~~-~~~~wChG~~Gi~~~l~~~~~~~~~~~~ 193 (298)
+=++++++.++. .+.+++.++++++|+.+... ++ |.|.....+... .....|+.-+=++++++. +..++++++
T Consensus 55 ~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG~~~~~~~~lyd~Af~i~al~~-~~~tgd~~~ 133 (402)
T 3gt5_A 55 TRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSC-GLKVGIKQA 133 (402)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHHTTCTTH
T ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCCCCCcCCcchHHHHHHHHHHHH-HHHhCChhH
Confidence 345666766653 35688999999999987544 33 554332211111 134566666667777777 556899999
Q ss_pred HHHHHHHHHHHHHh------cCCC---CCc--c--ccchhh---HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 022382 194 LQAAVDAGEVVWKR------GLLK---RVG--I--CHGISG---NTYVFLSLYRLTGNVEYLYRAKAFACFLYDRA 253 (298)
Q Consensus 194 ~~~~~~~~~~~~~~------~~~~---~~~--l--CHG~aG---~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 253 (298)
.+.|+++.+.+.+. +... ++. + .-+... ++..++.++++|+++.|+++++++++.+....
T Consensus 134 l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~tgd~~~~~~a~~l~~~~~~~f 209 (402)
T 3gt5_A 134 REWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASGEQRYLERALVLADRITRRQ 209 (402)
T ss_dssp HHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Confidence 99999988877553 1100 111 0 012222 34568899999999999999999888776653
No 21
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=95.90 E-value=0.29 Score=43.53 Aligned_cols=184 Identities=11% Similarity=0.010 Sum_probs=99.5
Q ss_pred HHHHHHHHcCChHHHHHHHHHHhhcc--CCCCC-C---------cccccchHHHHHHHHHHhhhhCCCcCcHHHHHHHHH
Q 022382 19 LGAVLAKHAGDERLLDHYLTKFKEIK--LPSDL-P---------NELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVD 86 (298)
Q Consensus 19 ~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~---------~d~~~G~aGil~~l~~l~~~~~~~~~~~~~~~~~~~ 86 (298)
.+..+|+.++|+++.+.+....+.+. +.... . -..+.|..-.+..|..+++.+++++|.+ .+.+.++
T Consensus 95 ~ll~lY~~Tgd~~yl~~a~~la~~l~~~~r~~~G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d-~A~~~~~ 173 (373)
T 1nc5_A 95 ILFPLYEQTKDERYVKAAKRLRSLYGTLNRTSEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFD-QVVLQES 173 (373)
T ss_dssp GHHHHHHHHCCHHHHHHHHHHHGGGGTSCBCTTSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHH-HHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHhccCCCCCCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHH-HHHHHHH
Confidence 44567899999999999988887762 11111 0 1134455444566788889999998864 5555555
Q ss_pred HHHHhcHhhhhcCCCCcce-eec--Cc-----cccccc-----cchHHHHHHHhcCCCC--------CchHHHHHHHHHH
Q 022382 87 EIIKAGRRLANRGRCPLMY-EWH--GK-----KYWGAA-----HGLAGIMHVLMDMELK--------PDEVEDVKGTLRY 145 (298)
Q Consensus 87 ~l~~~~~~~~~~~~~~~~~-~~~--~~-----~~~G~a-----HG~aGi~~~L~~~~~~--------~~~~~~i~~~l~~ 145 (298)
...+...... .-+.+ .+. +. ...|++ .|.+=.++++..+.+. +.+++.+++.+++
T Consensus 174 ~~~~~l~D~~----tGl~~h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~ 249 (373)
T 1nc5_A 174 LMRKHTKDAK----TGLFYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKS 249 (373)
T ss_dssp HHHHHHBCTT----TSCBCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCC----CCCEEeecCCccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHH
Confidence 5444322111 11111 111 10 001222 2222233333333321 1246677777888
Q ss_pred HHHccCC-CCCCCCCCCCC-CCcccccccCchhHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHh
Q 022382 146 MIKNRFP-SGNYPSSEGSE-SDRLVHWCHGAPGVTLTLAKAAEV-FGEKEFLQAAVDAGEVVWKR 207 (298)
Q Consensus 146 ~~~~~~~-~g~w~~~~~~~-~~~~~~wChG~~Gi~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~ 207 (298)
+.+.+-+ +|.|....+.. .+..+-=..|++.+++++++..+. .-+++|.+.++++.+.+.++
T Consensus 250 l~~~q~~~dG~W~~~ld~~~~~~~~~EsSatA~~ay~l~~g~~~g~l~~~Y~~~a~k~~~~l~~~ 314 (373)
T 1nc5_A 250 ICRYQDKETGLWYQIVDKGDRSDNWLESSGSCLYMYAIAKGINKGYLDRAYETTLLKAYQGLIQH 314 (373)
T ss_dssp HHTTSCTTTSCCBSBTTCTTSTTCCBCHHHHHHHHHHHHHHHHHTSSCGGGHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCceeeecCCCCCCCCCccccHHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHh
Confidence 8765444 88887422111 111111234567777777776533 12578999999999888764
No 22
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.67 E-value=0.15 Score=46.57 Aligned_cols=220 Identities=11% Similarity=0.015 Sum_probs=124.9
Q ss_pred HHHHHHHHHhhhhCCCcCcHHHHHHHHHHHHHhcHh---hhhcCCCCcceeecCccccccccchHHHHHHHhcCCCC---
Q 022382 59 GFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRR---LANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELK--- 132 (298)
Q Consensus 59 Gil~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~--- 132 (298)
-.+.++...++.++|++|. +.+++.++.+.+.... ..+. +.....++.+....++.+=.+-++++|..+++.
T Consensus 86 v~l~gl~~ay~~Tgd~kY~-~ya~~~~dfi~~~~p~~~~~~~~-~G~l~~~~r~~~~~~~LDD~g~~~~~Li~lY~~T~d 163 (445)
T 3k11_A 86 VTYSALIAAAETTGDKRYT-DYVQNRFRFLAEVAPHFKRVYEE-KGKTDSQLLQILTPHALDDAGAVCTAMIKLRLKDES 163 (445)
T ss_dssp HHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHHHHHHHHH-HSCCCHHHHHHHSCCSGGGTHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHhccchhhhhhhc-cCCeecccccccCCCcchhHHHHHHHHHHHHHhcCC
Confidence 3466778899999999887 4777777766553221 1110 011100010112245555566777888888752
Q ss_pred CchHHHHHHHHHHHHHccC--CCCC-CCCCCCCCCCcccccccCchhHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHHh
Q 022382 133 PDEVEDVKGTLRYMIKNRF--PSGN-YPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKE--FLQAAVDAGEVVWKR 207 (298)
Q Consensus 133 ~~~~~~i~~~l~~~~~~~~--~~g~-w~~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~ 207 (298)
+.+++.+.+..+++++... ++|. |.... ....-||.|.-=....++.+.+.++|++ +.+.|.+-.....+.
T Consensus 164 ~~yl~~a~~~ad~L~~~~pRt~~Ggf~h~~~----~~~q~WiD~lyM~~pfla~~~~~tgd~~~~y~d~A~~q~~~~~~~ 239 (445)
T 3k11_A 164 LPVDGLIQNYFDFIINKEYRLADGTFARNRP----QRNTLWLDDMFMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQFADR 239 (445)
T ss_dssp CCCHHHHHHHHHHHHHTSCBCTTCCBCBCSS----STTEEETHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCceeecCC----CCCceEecchhhHHHHHHHHHHHHCCcchHHHHHHHHHHHHHHHh
Confidence 4578999999999986432 3444 65321 1235699997445566778888899998 888887654443332
Q ss_pred ------cCC-----------CCCccccchhhHHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHHhhhhhcc-CCCC
Q 022382 208 ------GLL-----------KRVGICHGISGNTYVFLSLYRLTG-----NVEYLYRAKAFACFLYDRAQKLIAEG-KMHG 264 (298)
Q Consensus 208 ------~~~-----------~~~~lCHG~aG~~~~l~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~ 264 (298)
++. ....|..|.+=.+..+..+.+.++ ++.+++..+++++.++....+ +| |...
T Consensus 240 l~D~~tGL~~Hg~~~~~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~~---~G~W~~v 316 (445)
T 3k11_A 240 MFIPEKGLYRHGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSG---EGFWHQL 316 (445)
T ss_dssp HEETTTTEECSEEETTCSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCCT---TSCEESB
T ss_pred cccCCCCCEeeeecCCCCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCCC---CCchhhc
Confidence 210 113566666555555566666544 345555555555544443221 22 1111
Q ss_pred CC--CccccccchHHHHHHHHHccC
Q 022382 265 GD--RPYSLFEGIGGMTHLFLDMIE 287 (298)
Q Consensus 265 ~~--~~~gl~~G~sGi~~~Ll~~~~ 287 (298)
.+ .++-=-+|.|.++++|++..+
T Consensus 317 ld~~~~y~EsSaTAmfaygllkgvr 341 (445)
T 3k11_A 317 LDCNDSYLETSATAIYVYCLAHAIN 341 (445)
T ss_dssp TTCTTSCEEHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCccHHHHHHHHHHHHHH
Confidence 11 223334678888888887654
No 23
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=92.93 E-value=0.21 Score=45.25 Aligned_cols=129 Identities=18% Similarity=0.080 Sum_probs=79.9
Q ss_pred HHHHHhcCCC--CCchHHHHHHHHHHHHHccCC--CCCCCCCC-CCCCCcccccccCchhHHHHHHHHHHHhCcHHHHHH
Q 022382 122 IMHVLMDMEL--KPDEVEDVKGTLRYMIKNRFP--SGNYPSSE-GSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQA 196 (298)
Q Consensus 122 i~~~L~~~~~--~~~~~~~i~~~l~~~~~~~~~--~g~w~~~~-~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~ 196 (298)
+++++++++. .+++++.++++++++.+..++ .|.|.... .+........++.-+=++.++.. ++.++++++.+.
T Consensus 56 ~i~~~a~a~~~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~dg~~~~~k~lyd~Af~i~al~~-~~~tg~~~~l~~ 134 (421)
T 2zbl_A 56 MLHVYSVAASMGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAAS-AVTTGHPEARKL 134 (421)
T ss_dssp HHHHHHHHHHTTCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHTTTCTTHHHH
T ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCCCCCcCCchhHHHHHHHHHHHHH-HHHhCCccHHHH
Confidence 4444444443 456889999999999876443 25544321 11111012445555566667777 788999999999
Q ss_pred HHHHHHHHHHhcCC-----------CCCccc---cchhh---HHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 022382 197 AVDAGEVVWKRGLL-----------KRVGIC---HGISG---NTYVFLSLYRLTGNVEYLYRAKAFACFLYD 251 (298)
Q Consensus 197 ~~~~~~~~~~~~~~-----------~~~~lC---HG~aG---~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 251 (298)
++++.+.+.+.-.. .+...- -+..+ .+..++.+++++++++|.++|.++++.+..
T Consensus 135 a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~~~~ 206 (421)
T 2zbl_A 135 LDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIH 206 (421)
T ss_dssp HHHHHHHHHHHTEETTTTEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhccCCCCCeeeeecCCCCcccccCCCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 99887776543110 000001 11233 367788899999999999998888776554
No 24
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=92.23 E-value=6.8 Score=35.91 Aligned_cols=226 Identities=12% Similarity=0.049 Sum_probs=112.4
Q ss_pred HHHHHHcCChHHHHHHHHHHhhc--cCCCCC--C---cc-----------------cccchHHHHHHHHHHhhhhCCCcC
Q 022382 21 AVLAKHAGDERLLDHYLTKFKEI--KLPSDL--P---NE-----------------LLYGRVGFLWACSFLNKHMGKDTI 76 (298)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~---~d-----------------~~~G~aGil~~l~~l~~~~~~~~~ 76 (298)
...|.+++|+.+++.|.++.+.+ .+++.. + .+ .+.+.+.+.+=+..+.+.++|++|
T Consensus 115 LSAy~Lsgd~~lL~kA~dLad~LlpAFdTptgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~lTGd~~Y 194 (478)
T 1nxc_A 115 LSAYYLSGEEIFRKKAVELGVKLLPAFHTPSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHLSGDPVF 194 (478)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHGGGGCSSSSCCCSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHHHCCTHH
T ss_pred hhhhhccCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCcccCCCCcccccccchhhhHHHHHHHHCChHH
Confidence 34567789999999999988876 121111 0 11 112222234556788899999998
Q ss_pred cHHHHHHHHHHHHHhcHhhhhcCCCCccee-----ecCccccccccchHHHHHHHhcCCC----C-CchHHHHHHHHHHH
Q 022382 77 STAQMRAVVDEIIKAGRRLANRGRCPLMYE-----WHGKKYWGAAHGLAGIMHVLMDMEL----K-PDEVEDVKGTLRYM 146 (298)
Q Consensus 77 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~G~aHG~aGi~~~L~~~~~----~-~~~~~~i~~~l~~~ 146 (298)
.+ .+.++.+.+.+.... ....|..+. |.+ ...++.-|.=..-=.|.+.+. . ..+.+.-.++++-+
T Consensus 195 ~~-~a~~~~~~l~~~~~~---~GL~p~~i~~~tg~~~~-~~~~~Ga~~DS~YEYLlK~~il~g~~d~~~~~m~~~a~~~i 269 (478)
T 1nxc_A 195 AE-KVMKIRTVLNKLDKP---EGLYPNYLNPSSGQWGQ-HHVSVGGLGDSFYEYLLKAWLMSDKTDLEAKKMYFDAVQAI 269 (478)
T ss_dssp HH-HHHHHHHHHHHSCCG---GGCCCSEECTTTCCBCS-CEECSSTTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHhcCCC---CCccccccCCCCCCccC-ceeeecCCCchHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 74 666666655443211 112232211 211 123444444333334444432 1 22445555555555
Q ss_pred HHccC---CCCCCCCCCCCCCCcccccccCc---hhHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHH------hcCCC
Q 022382 147 IKNRF---PSGNYPSSEGSESDRLVHWCHGA---PGVTLTLAKAAEVFG---EKEFLQAAVDAGEVVWK------RGLLK 211 (298)
Q Consensus 147 ~~~~~---~~g~w~~~~~~~~~~~~~wChG~---~Gi~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~------~~~~~ 211 (298)
.++.. +++.+-..........+..-|-+ +|+.. + ..+... .+++.+.+++..+.... .++..
T Consensus 270 ~~~l~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~gG~~a-L--g~~~~~~~~~~~~l~~a~~l~~tC~~~y~~~~tgl~P 346 (478)
T 1nxc_A 270 ETHLIRKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGMFA-L--GADGAPEARAQHYLELGAEIARTCHESYNRTYVKLGP 346 (478)
T ss_dssp HHHTEEECTTSCEEECEEETTEEECEEETGGGGHHHHHH-H--TSTTSCTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC
T ss_pred HHHhcccCCCCcEEEEeccCCcccccccchhhhhHHHHH-h--ccccccccchHHHHHHHHHHHHHHHHHHHhcccCCCC
Confidence 44322 22221100000001111122222 23322 1 122222 35677777776655432 12221
Q ss_pred ---CCccccchh-------------hHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Q 022382 212 ---RVGICHGIS-------------GNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQ 254 (298)
Q Consensus 212 ---~~~lCHG~a-------------G~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (298)
...-|+... =.+..+..+|+.|||++|++.+.++++.+....+
T Consensus 347 E~~~~~~~~~~~~~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~~f~ai~k~~r 405 (478)
T 1nxc_A 347 EAFRFDGGVEAIATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEALESHCR 405 (478)
T ss_dssp SEEESSTTCSSBCCSGGGCCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTE
T ss_pred eEEEeccCcccccccccccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhh
Confidence 123354322 2378889999999999999999988887777654
No 25
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=90.41 E-value=1.3 Score=39.66 Aligned_cols=131 Identities=11% Similarity=0.116 Sum_probs=79.5
Q ss_pred hHHHHHHHhcCCCC------CchHHHHHHHHHHHHHccCCCCCCCCCCCCCCC--cccccccCchhHHHH-HHHHHHHhC
Q 022382 119 LAGIMHVLMDMELK------PDEVEDVKGTLRYMIKNRFPSGNYPSSEGSESD--RLVHWCHGAPGVTLT-LAKAAEVFG 189 (298)
Q Consensus 119 ~aGi~~~L~~~~~~------~~~~~~i~~~l~~~~~~~~~~g~w~~~~~~~~~--~~~~wChG~~Gi~~~-l~~~~~~~~ 189 (298)
.+-++.+|.+++.. +.+.+.+.++++|++..++++|.||....+... ...-+|...++-.+. |..+..-..
T Consensus 151 Ta~vl~aL~rv~~~~t~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFdpdn~~y~~~IpFnDDvt~rvle~L~~~~~~~~ 230 (408)
T 1r76_A 151 TVTEIRFLAQVVSQLAPEEAAPYRDAALKGIEYLLASQFPNGGWPQVWPLEGGYHDAITYNDDALVHVAELLSDIAAGRD 230 (408)
T ss_dssp THHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHSCTTSCCBSBSSCCCGGGGSEECGGGHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHccCCCCCCcCcCccccccccCCCcCcHHHHHHHHHHHHHHhccC
Confidence 67788899887643 236789999999999888899999754322211 124467766665555 334433111
Q ss_pred -----c----HHHHHHHHHHHHHHHHhcCC-------------------------CCCccccc-hhhHHHHHHHHHHHhC
Q 022382 190 -----E----KEFLQAAVDAGEVVWKRGLL-------------------------KRVGICHG-ISGNTYVFLSLYRLTG 234 (298)
Q Consensus 190 -----~----~~~~~~~~~~~~~~~~~~~~-------------------------~~~~lCHG-~aG~~~~l~~l~~~~~ 234 (298)
+ ++..+.++++++.+.+.... ..+++|-. ++|++.+|+.+. .+
T Consensus 231 ~~~~~~~~~~~~~~~av~Rgi~~Ll~~Qe~~dGsw~rWg~qY~ygT~~Pa~aRsYE~psLs~~esa~il~~LM~~~--~~ 308 (408)
T 1r76_A 231 GFGFVPPAIRTRALEATNAAIHCIVETQVVQDGKRLGWGQQHDALTLRPTSARNFEPAALSSTESARILLFLMEIE--AP 308 (408)
T ss_dssp TCTTSCHHHHHHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCSBCCCSTTCCSCEEHHHHHHHHHHHTTSS--SC
T ss_pred cccccchhhhhhHHHHHHHHHHHHHHhhcccCCcccchhcccccccCcchhhhccCCccccHHHHHHHHHHHccCC--CC
Confidence 2 36777888888888764211 01244321 334555554433 46
Q ss_pred CHHHHHHHHHHHHHHHH
Q 022382 235 NVEYLYRAKAFACFLYD 251 (298)
Q Consensus 235 ~~~~~~~~~~~~~~~~~ 251 (298)
++++++.+.+..+.+..
T Consensus 309 ~~~~~~aI~~Av~WL~s 325 (408)
T 1r76_A 309 SDAVKQAIRGGVAWLNT 325 (408)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 77777777776666555
No 26
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=89.91 E-value=2 Score=39.41 Aligned_cols=175 Identities=15% Similarity=0.118 Sum_probs=97.6
Q ss_pred HcCChHHHHHHHHHHhh-ccCCCCCCcccccchHHHHHHHHHHhhhhCCCcCcHHHHHHHHHHHHHhcHhhhhcCCCCcc
Q 022382 26 HAGDERLLDHYLTKFKE-IKLPSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLM 104 (298)
Q Consensus 26 ~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~G~aGil~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 104 (298)
+.|..+..+++.+.+.+ +.+..+...+++-=..=++=.|+..|..++++.++ +.+.+++++|+.... .....|..
T Consensus 75 IMgl~~Ef~~A~~~v~~~l~f~~~~~vsvFETtIR~LGGLLSAy~Lsgd~~lL-~kA~dLad~LlpAFd---TptgiP~~ 150 (478)
T 1nxc_A 75 IMGMKTEFQEAKSWIKKYLDFNVNAEVSVFEVNIRFVGGLLSAYYLSGEEIFR-KKAVELGVKLLPAFH---TPSGIPWA 150 (478)
T ss_dssp HTTCHHHHHHHHHHHHHHCCCCCSSEEEHHHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHGGGGC---SSSSCCCS
T ss_pred ecCCHHHHHHHHHHHHhhcCccCCCccchhheehhhhhhhhhhhhccCCHHHH-HHHHHHHHHHHHhhc---CCCCCCcc
Confidence 47888888888887765 66655555666665555555666777778887666 477888888876542 11122321
Q ss_pred e-eecC-c-cccccc----cchHHHHHHH------hcCCCCCchHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccc
Q 022382 105 Y-EWHG-K-KYWGAA----HGLAGIMHVL------MDMELKPDEVEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWC 171 (298)
Q Consensus 105 ~-~~~~-~-~~~G~a----HG~aGi~~~L------~~~~~~~~~~~~i~~~l~~~~~~~~~~g~w~~~~~~~~~~~~~wC 171 (298)
. .+.. . ...+.+ ...|++.... +++...+.+.+.++++.+.+.+.+-..|-||...+.. ...|.
T Consensus 151 ~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~GL~p~~i~~~---tg~~~ 227 (478)
T 1nxc_A 151 LLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHLSGDPVFAEKVMKIRTVLNKLDKPEGLYPNYLNPS---SGQWG 227 (478)
T ss_dssp EEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHSCCGGGCCCSEECTT---TCCBC
T ss_pred eeecccccCCCCcccCCCCcccccccchhhhHHHHHHHHCChHHHHHHHHHHHHHHhcCCCCCccccccCCC---CCCcc
Confidence 1 1110 0 111222 1245554433 3333345577778877776654333457777543211 12344
Q ss_pred c-----CchhHHH--HHHHHHHHhC--cHHHHHHHHHHHHHHHHh
Q 022382 172 H-----GAPGVTL--TLAKAAEVFG--EKEFLQAAVDAGEVVWKR 207 (298)
Q Consensus 172 h-----G~~Gi~~--~l~~~~~~~~--~~~~~~~~~~~~~~~~~~ 207 (298)
. |+-|-.+ .+++.+-.++ ++.+.+.-+++.+.+.+.
T Consensus 228 ~~~~~~Ga~~DS~YEYLlK~~il~g~~d~~~~~m~~~a~~~i~~~ 272 (478)
T 1nxc_A 228 QHHVSVGGLGDSFYEYLLKAWLMSDKTDLEAKKMYFDAVQAIETH 272 (478)
T ss_dssp SCEECSSTTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred CceeeecCCCchHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHH
Confidence 3 3333333 3555555564 677888777777776553
No 27
>3e7j_A Heparinase II protein; alpha and beta lyase, alpha6/alpha6 incomplete toroid, sugar protein, lyase; HET: NAG GCU GCD; 2.10A {Pedobacter heparinus} PDB: 3e80_A* 2fut_A* 2fuq_A*
Probab=89.27 E-value=3.1 Score=40.50 Aligned_cols=211 Identities=10% Similarity=-0.032 Sum_probs=99.1
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHhhc-cC-CCCCCcccccchHHHHHHHHHHhhhhCCCcCcHHHHHHHHHHHHHhcHh
Q 022382 17 CALGAVLAKHAGDERLLDHYLTKFKEI-KL-PSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRR 94 (298)
Q Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~d~~~G~aGil~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~ 94 (298)
+..+..+|.++||++|++.+.+.+..+ .. ......|+.-+.+=++.++...|....+ .+.++.-..+.+.|.+.+..
T Consensus 85 l~~LalAylLtgD~ryad~a~~~L~~~~~~~~W~~~~Dl~~~~a~~~~~lA~aYD~Lyd-~Ls~eeR~~Ir~~I~~~~~~ 163 (749)
T 3e7j_A 85 VELMALNYLMTKDPKVGREAITSIIDTLETATFKPAGDISRGIGLFMVTGAIVYDWCYD-QLKPEEKTRFVKAFVRLAKM 163 (749)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCTTTHHHHHHHHHHHHHHHHHTGG-GCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHhhcccCCCcccchHHHHHHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHH
Confidence 455566788999999999999887664 11 1112255543333344444444444432 33333444455555554322
Q ss_pred hhhcCCCCcceee-cCcccc-ccccchHHHHH-HHhcCCCCCchHHHHH-HHHHHH--HHcc-CCCCCCCCCCCCCCCcc
Q 022382 95 LANRGRCPLMYEW-HGKKYW-GAAHGLAGIMH-VLMDMELKPDEVEDVK-GTLRYM--IKNR-FPSGNYPSSEGSESDRL 167 (298)
Q Consensus 95 ~~~~~~~~~~~~~-~~~~~~-G~aHG~aGi~~-~L~~~~~~~~~~~~i~-~~l~~~--~~~~-~~~g~w~~~~~~~~~~~ 167 (298)
.... -.+....| ....+. -.++| ++. +|+.+.+.++..+.+. .+++.. +... .++|.|... .
T Consensus 164 p~~~-w~~~~~~~~~~~~NWn~vc~G---ll~aALAL~~d~pe~~~~~~~~~~~~~~~l~~~~~~DG~~~EG-------~ 232 (749)
T 3e7j_A 164 LECG-YPPVKDKSIVGAASEWMIMRD---LLSVGIAIYDEFPEMYNLAAGRFFKEHLVARNWFYPSHNYHQG-------M 232 (749)
T ss_dssp STTC-SSSCSSCSSSSGGGTHHHHTH---HHHHHHHTTTTCTHHHHHHHHHHHHTHHHHHHHHGGGCCCSSH-------H
T ss_pred HHHh-ccccccccccCCChHHHHHHH---HHHHHHHHcCCcHHHHHHHHHHHHHhhhhhhcccCCCCCcccc-------H
Confidence 2111 00000001 111111 13343 333 2332333343322222 122111 1111 268887632 3
Q ss_pred cccccCchhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCCCCccccchh--------hHHHHHHHHHHHhCCHHHH
Q 022382 168 VHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKRVGICHGIS--------GNTYVFLSLYRLTGNVEYL 239 (298)
Q Consensus 168 ~~wChG~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lCHG~a--------G~~~~l~~l~~~~~~~~~~ 239 (298)
.+|-+|+.-...++..+...++.+.+...+++..+...............|++ +....+..+++.++|+.+.
T Consensus 233 ~Yw~yg~~~l~~~~~aL~~~tg~d~~~p~l~k~a~y~l~~~~p~g~~~nfgDs~~~~~~p~~~~~al~~~a~~~~dp~l~ 312 (749)
T 3e7j_A 233 SALNVRFTNDLFALWILDRMGAGNVFNPGQQFILYDAIYKRRPDGQILAGGDVDYSRKKPKYYTMPALLAGSYYKDEYLN 312 (749)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSCGGGGGTTHHHHHTBCTTSCBCCCSSCCCCSSSCCCCHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHeeCCCCceeecCCCCcccCccccchHHHHHHHHhhCCHHHH
Confidence 68999999998888888888765433334444445444321111111222221 1123344557889998765
No 28
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=88.10 E-value=4.8 Score=35.72 Aligned_cols=76 Identities=16% Similarity=0.141 Sum_probs=55.5
Q ss_pred HHHHHHHHHHh---CcHHHHHHHHHHHHHHHHhcCCCC------------------CccccchhhHHHHHHHHHHHhCCH
Q 022382 178 TLTLAKAAEVF---GEKEFLQAAVDAGEVVWKRGLLKR------------------VGICHGISGNTYVFLSLYRLTGNV 236 (298)
Q Consensus 178 ~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~------------------~~lCHG~aG~~~~l~~l~~~~~~~ 236 (298)
+.++..++..+ +++++.+.++++++.+.+...... ...|-+.+=.+..+..+++.|+++
T Consensus 62 l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~~~~d~~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~ 141 (402)
T 1fp3_A 62 VWMYCRLYRKLERFHRPELLDAAKAGGEFLLRHARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEA 141 (402)
T ss_dssp HHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTBSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhccCcCCCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHhCCH
Confidence 44566667776 899999999999998876532111 122223445577778889999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 022382 237 EYLYRAKAFACFLYDRA 253 (298)
Q Consensus 237 ~~~~~~~~~~~~~~~~~ 253 (298)
.+++.|.++.+.+....
T Consensus 142 ~~~~~A~~l~~~~~~~~ 158 (402)
T 1fp3_A 142 RYQSEAVDMMDQIVHWV 158 (402)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999988887765
No 29
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=87.68 E-value=1.6 Score=37.79 Aligned_cols=130 Identities=12% Similarity=0.152 Sum_probs=80.8
Q ss_pred hHHHHHHHhcCCCC---CchHHHHHHHHHHHHHccCCCCCCCCCCCCC--CCcccccccCchhHHHHHHHHHHH------
Q 022382 119 LAGIMHVLMDMELK---PDEVEDVKGTLRYMIKNRFPSGNYPSSEGSE--SDRLVHWCHGAPGVTLTLAKAAEV------ 187 (298)
Q Consensus 119 ~aGi~~~L~~~~~~---~~~~~~i~~~l~~~~~~~~~~g~w~~~~~~~--~~~~~~wChG~~Gi~~~l~~~~~~------ 187 (298)
.+-.+.+|.+++.. +.+.+.+.++++|++..++++|.||.-.++. .....-+|...++=.+-++.....
T Consensus 76 Ta~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFdpd~~~Yl~~IpFnDDvtarvLelL~~~~~~~~~~~ 155 (332)
T 1gxm_A 76 TITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQYSTGALPQFYPLKGGYSDHATFNDNGMAYALTVLDFAANKRAPFD 155 (332)
T ss_dssp THHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCTTSCCBSEESCCSGGGGSEECGGGHHHHHHHHHHHHHTTCTTSC
T ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHHHHhccCCCCCccccCCCcccccccCCcchHHHHHHHHHHHHHHhccCCcc
Confidence 57888899888752 3467899999999998888999998543221 112245677666655544443321
Q ss_pred ---hCc---HHHHHHHHHHHHHHHHhcC-----------------C--------CCCccccch-hhHHHHHHHHHHHhCC
Q 022382 188 ---FGE---KEFLQAAVDAGEVVWKRGL-----------------L--------KRVGICHGI-SGNTYVFLSLYRLTGN 235 (298)
Q Consensus 188 ---~~~---~~~~~~~~~~~~~~~~~~~-----------------~--------~~~~lCHG~-aG~~~~l~~l~~~~~~ 235 (298)
+.+ ++....++++++.+.+... . ..++||-.. +|++.+++.... +
T Consensus 156 ~~~~~~~~~~~~~~av~Rgid~Llk~Qe~dggw~g~Wg~qydygT~~Pa~ARayE~psL~~~es~giv~~LM~~~~---~ 232 (332)
T 1gxm_A 156 TDVFSDNDRTRFKTAVTKGTDYILKAQWKQNGVLTVWCAQHGALDYQPKKARAYELESLSGSESVGVLAFLMTQPQ---T 232 (332)
T ss_dssp STTSCHHHHHHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCCBCCCSTTCCSSEETTTHHHHHHHHTTSCC---C
T ss_pred ccccccchhhhhHHHHHHHHHHHHHhhCccCCCcCeeccccccccccccccccccccchhHHHHHHHHHHhccCCC---C
Confidence 222 5667778888888876521 0 024666544 467777765443 5
Q ss_pred HHHHHHHHHHHHHHHH
Q 022382 236 VEYLYRAKAFACFLYD 251 (298)
Q Consensus 236 ~~~~~~~~~~~~~~~~ 251 (298)
+++++.+++..+.+..
T Consensus 233 ~~v~~aI~~Av~WL~~ 248 (332)
T 1gxm_A 233 AEIEQAVRAGVAWFNS 248 (332)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 7666666655554443
No 30
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=85.08 E-value=12 Score=35.17 Aligned_cols=27 Identities=15% Similarity=0.079 Sum_probs=23.4
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHhhc
Q 022382 17 CALGAVLAKHAGDERLLDHYLTKFKEI 43 (298)
Q Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~~~~ 43 (298)
+|....+|+.|+|+.|++.+....+.+
T Consensus 309 ~WAA~eLy~ATgd~~YL~~a~~~a~~l 335 (586)
T 3h7l_A 309 LLASVELFKATKETRYLEESRLWAQRL 335 (586)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 688899999999999999998876654
No 31
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=84.65 E-value=3.2 Score=35.98 Aligned_cols=142 Identities=14% Similarity=0.083 Sum_probs=83.7
Q ss_pred chHHHHHHHHHHhhhhCCCcCcHHHHHHHHHHHHHhcHhhhhcCCCCcceeecCc--cccccccchHH-HHHHHhcCCCC
Q 022382 56 GRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGK--KYWGAAHGLAG-IMHVLMDMELK 132 (298)
Q Consensus 56 G~aGil~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~G~aHG~aG-i~~~L~~~~~~ 132 (298)
.++-.+.+|..++...+++++. +.+.+.+++|+....+ +..+|-.++.... ..+=|+..+++ ++-+|..+...
T Consensus 75 dTa~vl~~Larv~~~~~~~~y~-~Ai~Rgl~wlL~mQ~~---nGGWpqFdpd~~~Yl~~IpFnDDvtarvLelL~~~~~~ 150 (332)
T 1gxm_A 75 ATITEMVFLAEVYKSGGNTKYR-DAVRKAANFLVNSQYS---TGALPQFYPLKGGYSDHATFNDNGMAYALTVLDFAANK 150 (332)
T ss_dssp TTHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHCCT---TSCCBSEESCCSGGGGSEECGGGHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHhccccchHHH-HHHHHHHHHHHhccCC---CCCccccCCCcccccccCCcchHHHHHHHHHHHHHHhc
Confidence 3677888888888877766665 5888899999886432 2234432221110 12335555544 44455555321
Q ss_pred --------------CchHHHHHHHHHHHHHccCCCCCCCCCCCC----------C--CCcccccccCch-hHHHHHHHHH
Q 022382 133 --------------PDEVEDVKGTLRYMIKNRFPSGNYPSSEGS----------E--SDRLVHWCHGAP-GVTLTLAKAA 185 (298)
Q Consensus 133 --------------~~~~~~i~~~l~~~~~~~~~~g~w~~~~~~----------~--~~~~~~wChG~~-Gi~~~l~~~~ 185 (298)
....+.++++++|+++.+.++|.|...-.. . .-..++.|-..+ ||+..++...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~av~Rgid~Llk~Qe~dggw~g~Wg~qydygT~~Pa~ARayE~psL~~~es~giv~~LM~~~ 230 (332)
T 1gxm_A 151 RAPFDTDVFSDNDRTRFKTAVTKGTDYILKAQWKQNGVLTVWCAQHGALDYQPKKARAYELESLSGSESVGVLAFLMTQP 230 (332)
T ss_dssp CTTSCSTTSCHHHHHHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCCBCCCSTTCCSSEETTTHHHHHHHHTTSC
T ss_pred cCCccccccccchhhhhHHHHHHHHHHHHHhhCccCCCcCeeccccccccccccccccccccchhHHHHHHHHHHhccCC
Confidence 123467889999999888755544322100 0 112356776654 6666555533
Q ss_pred HHhCcHHHHHHHHHHHHHH
Q 022382 186 EVFGEKEFLQAAVDAGEVV 204 (298)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~ 204 (298)
.++++.+.++++++.+
T Consensus 231 ---~~~~v~~aI~~Av~WL 246 (332)
T 1gxm_A 231 ---QTAEIEQAVRAGVAWF 246 (332)
T ss_dssp ---CCHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHHH
Confidence 2688999999988765
No 32
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=84.43 E-value=17 Score=33.81 Aligned_cols=174 Identities=14% Similarity=0.054 Sum_probs=95.4
Q ss_pred HcCChHHHHHHHHHHhh-ccCCCCCCcccccchHHHHHHHHHHhhhhCCCcCcHHHHHHHHHHHHHhcHhhhhcCCCCcc
Q 022382 26 HAGDERLLDHYLTKFKE-IKLPSDLPNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIKAGRRLANRGRCPLM 104 (298)
Q Consensus 26 ~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~G~aGil~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 104 (298)
+.|..+..+++.+.+.+ +.+..+...+++-=+.=++=.|+..|..++++.++ +.+.+++++|+..... ....|..
T Consensus 139 IMgl~~EF~~A~~~V~~~~~f~~d~~VsvFETtIR~LGGLLSAy~Lsgd~~lL-~kA~dLadrLlpAFdT---ptgiP~~ 214 (538)
T 1x9d_A 139 ILGLRKEFEEARKWVSKKLHFEKDVDVNLFESTIRILGGLLSAYHLSGDSLFL-RKAEDFGNRLMPAFRT---PSKIPYS 214 (538)
T ss_dssp HTTCHHHHHHHHHHHHHHCCCCSSCEEEHHHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHGGGGCS---TTSCCCS
T ss_pred ecCCHHHHHHHHHHHHHhcCCCCCceeehhheehhhhhhhhhHHHhcCCHHHH-HHHHHHHHHHHHhhcC---CCCCCcc
Confidence 47888888888887654 55554555665554444444556666777777665 4778888888765421 1122321
Q ss_pred e-eec-Cc-cccccc--cchHHHHHHHhcC------CCCCchHHHHHHHHHHHHHcc-CCCCCCCCCCCCCCCccccccc
Q 022382 105 Y-EWH-GK-KYWGAA--HGLAGIMHVLMDM------ELKPDEVEDVKGTLRYMIKNR-FPSGNYPSSEGSESDRLVHWCH 172 (298)
Q Consensus 105 ~-~~~-~~-~~~G~a--HG~aGi~~~L~~~------~~~~~~~~~i~~~l~~~~~~~-~~~g~w~~~~~~~~~~~~~wCh 172 (298)
+ .+. +. ...+.+ ...|++....+.+ ...+.+.+.++++.+.+.+.+ -..|-||...+. ....|+.
T Consensus 215 ~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTGd~~Y~~~a~r~~~~l~~~~~~~~GL~p~~i~~---~tG~~~~ 291 (538)
T 1x9d_A 215 DVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDKKFQEAVEKVTQHIHGLSGKKDGLVPMFINT---HSGLFTH 291 (538)
T ss_dssp EEETTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHCCTHHHHHHHHHHHHHHTCSCCBTTBCCSEEET---TTCCEES
T ss_pred eeeecccccCCCCcCCCceeccccceeeeHHHHHHHhCCcHHHHHHHHHHHHHHhcccCCCCCcceEEeC---CCCCccC
Confidence 1 111 00 001111 1245555443333 223557788888888776544 246667754321 1234554
Q ss_pred C-chhH-----HH--HHHHHHHHhC--cHHHHHHHHHHHHHHHH
Q 022382 173 G-APGV-----TL--TLAKAAEVFG--EKEFLQAAVDAGEVVWK 206 (298)
Q Consensus 173 G-~~Gi-----~~--~l~~~~~~~~--~~~~~~~~~~~~~~~~~ 206 (298)
. ..|+ -+ .+++.+-.++ ++.+.+.-+++.+.+.+
T Consensus 292 ~~~~~lGa~~DS~YEYLlK~~il~g~~d~~y~~my~~a~~~i~~ 335 (538)
T 1x9d_A 292 LGVFTLGARADSYYEYLLKQWIQGGKQETQLLEDYVEAIEGVRT 335 (538)
T ss_dssp TTEECSSTTTHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHH
T ss_pred CcceeecCCccHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 4 3333 22 4666666666 67777777777666544
No 33
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=82.77 E-value=7.3 Score=36.62 Aligned_cols=123 Identities=10% Similarity=0.030 Sum_probs=73.2
Q ss_pred cccccchHHHHHHHhcCCCC-----C---chHHHHHHHHHHHHHccCCCCCCCCCCCCCCCcccccccCchhH------H
Q 022382 113 WGAAHGLAGIMHVLMDMELK-----P---DEVEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGV------T 178 (298)
Q Consensus 113 ~G~aHG~aGi~~~L~~~~~~-----~---~~~~~i~~~l~~~~~~~~~~g~w~~~~~~~~~~~~~wChG~~Gi------~ 178 (298)
.++.-|..=.+.+|+..+.. . .+++.++++.++..++.. .+ +..|.+|+ +
T Consensus 246 ~~~~~~agl~aAALA~Asrvf~d~~~~a~~~L~aA~~a~~fa~~~~~---~y-------------~~~g~~~~~De~~~~ 309 (586)
T 3h7l_A 246 AGFRQGGGVAIAALAAASRLGVHGEYDQQKYRNAAENGYWHLKEHNT---QY-------------LNDGEENIIDEYCAL 309 (586)
T ss_dssp CCGGGTHHHHHHHHHHHTTSSSCSSSCHHHHHHHHHHHHHHHHHHHH---HH-------------STTSCCCHHHHHHHH
T ss_pred cCCCCcHHHHHHHHHHHhcccCCCCcChHHHHHHHHHHHHHHHhcCc---cc-------------cCCCCccchhHHHHH
Confidence 44555655566677776654 2 357888888988876421 00 01133444 6
Q ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHHHh-------cC-C-----CCCccccch-hhHHH-HHHHHHHHhCCHHHHHHHH
Q 022382 179 LTLAKAAEVFGEKEFLQAAVDAGEVVWKR-------GL-L-----KRVGICHGI-SGNTY-VFLSLYRLTGNVEYLYRAK 243 (298)
Q Consensus 179 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~-----~~~~lCHG~-aG~~~-~l~~l~~~~~~~~~~~~~~ 243 (298)
++.+.+++.|+|++|++.+....+.+..+ ++ . ..-.++|+. .|+.. .|+.+.+.++++.+.++++
T Consensus 310 WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~~~~g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~a~ 389 (586)
T 3h7l_A 310 LASVELFKATKETRYLEESRLWAQRLVARQMSDEQIQHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIEDDSVQTESVK 389 (586)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHTTEECCSSCSSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhccCCccCCCcCCCcccCCcccccccccHHHHHHHHHhhhhcCChHHHHHHH
Confidence 88899999999999999998766555422 11 0 012345544 33322 2556778888776666666
Q ss_pred HHHHHHHH
Q 022382 244 AFACFLYD 251 (298)
Q Consensus 244 ~~~~~~~~ 251 (298)
..+....+
T Consensus 390 ~~i~~~~d 397 (586)
T 3h7l_A 390 CIVNRACE 397 (586)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 65544443
No 34
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=81.25 E-value=29 Score=30.89 Aligned_cols=116 Identities=9% Similarity=0.019 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCCCCC------C-Cc----------ccccc----------------cCchhHHHHHHH
Q 022382 137 EDVKGTLRYMIKNRFPSGNYPSSEGSE------S-DR----------LVHWC----------------HGAPGVTLTLAK 183 (298)
Q Consensus 137 ~~i~~~l~~~~~~~~~~g~w~~~~~~~------~-~~----------~~~wC----------------hG~~Gi~~~l~~ 183 (298)
+.+++..+.++..+.++|.|+-..+-. . .. ..+.| ..++-++.+|..
T Consensus 81 ~~A~~iAd~ll~~Q~~~GGW~kn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~DnddTa~vl~aL~r 160 (408)
T 1r76_A 81 KAARHVADVIVSFQTPAGGWGKNQPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDWHYVGTIDNDATVTEIRFLAQ 160 (408)
T ss_dssp HHHHHHHHHHHHHCCTTSCCCSSCCSSSCCCCTTCCSSCCCCCCCC---------CCCCCSSSSBCGGGTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHccccCCCCCCccccccccchhhhhcccccccccccccccchhhcccccCCCCCCCCchHHHHHHHHHH
Confidence 457778888887677889887532110 0 00 11222 336667788888
Q ss_pred HHHH-h--CcHHHHHHHHHHHHHHHHhc-----C----------CCCCccccchhhHHHHHHH-HHHHhC-----CH---
Q 022382 184 AAEV-F--GEKEFLQAAVDAGEVVWKRG-----L----------LKRVGICHGISGNTYVFLS-LYRLTG-----NV--- 236 (298)
Q Consensus 184 ~~~~-~--~~~~~~~~~~~~~~~~~~~~-----~----------~~~~~lCHG~aG~~~~l~~-l~~~~~-----~~--- 236 (298)
++.. + +++++.+.++++++.+..-. . .+..++|-..++.+.-++. +....+ ++
T Consensus 161 v~~~~t~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFdpdn~~y~~~IpFnDDvt~rvle~L~~~~~~~~~~~~~~~~~~ 240 (408)
T 1r76_A 161 VVSQLAPEEAAPYRDAALKGIEYLLASQFPNGGWPQVWPLEGGYHDAITYNDDALVHVAELLSDIAAGRDGFGFVPPAIR 240 (408)
T ss_dssp HHHHSCGGGCHHHHHHHHHHHHHHHHHSCTTSCCBSBSSCCCGGGGSEECGGGHHHHHHHHHHHHHHTCTTCTTSCHHHH
T ss_pred HHhhccccccHHHHHHHHHHHHHHHHccCCCCCCcCcCccccccccCCCcCcHHHHHHHHHHHHHHhccCcccccchhhh
Confidence 8877 6 78999999999999886431 1 1236677777766665443 433112 22
Q ss_pred -HHHHHHHHHHHHHHHH
Q 022382 237 -EYLYRAKAFACFLYDR 252 (298)
Q Consensus 237 -~~~~~~~~~~~~~~~~ 252 (298)
+....+++..++++..
T Consensus 241 ~~~~~av~Rgi~~Ll~~ 257 (408)
T 1r76_A 241 TRALEATNAAIHCIVET 257 (408)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHh
Confidence 3444455555555554
No 35
>3a0o_A Oligo alginate lyase; alpha/alpha ballel+anti-parallel beta sheet; 2.11A {Agrobacterium tumefaciens} PDB: 3afl_A*
Probab=81.02 E-value=22 Score=34.53 Aligned_cols=28 Identities=18% Similarity=0.151 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHhhc
Q 022382 16 VCALGAVLAKHAGDERLLDHYLTKFKEI 43 (298)
Q Consensus 16 i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 43 (298)
-+..+..+|.++||++|++.+.+.+.+.
T Consensus 211 ~l~~la~ay~ltgd~kya~~a~~~L~~~ 238 (776)
T 3a0o_A 211 AIRHLAIAGRVLGRDDLLDASRKWLLAV 238 (776)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3556677889999999999999877554
No 36
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=79.82 E-value=14 Score=34.09 Aligned_cols=174 Identities=9% Similarity=0.049 Sum_probs=88.6
Q ss_pred HcCChHHHHHHHHHHhhccCCC----CCCcccccchHHHHHHHHHHhhhhCCC------------cCcHHHHHHHHHHHH
Q 022382 26 HAGDERLLDHYLTKFKEIKLPS----DLPNELLYGRVGFLWACSFLNKHMGKD------------TISTAQMRAVVDEII 89 (298)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~----~~~~d~~~G~aGil~~l~~l~~~~~~~------------~~~~~~~~~~~~~l~ 89 (298)
+.|..+..+++.+.+.++.+.. +...+++-=+.=++=.|+..|..++++ .++ +.+.+++++|+
T Consensus 67 IMgl~~Ef~~A~~~v~~l~f~~~~~~~~~VsvFETtIR~LGGLLSAy~Ls~~~~~~~~~~~~~~~~lL-~kA~dLadrLl 145 (503)
T 1hcu_A 67 LMGDADIVNTILQYVPQINFTTTAVANQGSSVFETNIRYLGGLLSAYDLLRGPFSSLATNQTLVNSLL-RQAQTLANGLK 145 (503)
T ss_dssp HTTCHHHHHHHHHHGGGCCTTCCSSTTCCEEHHHHHHHHHHHHHHHHHHHHTTTGGGCCCHHHHHHHH-HHHHHHHHHHG
T ss_pred hcCCHHHHHHHHHHHHhCCCCcccccCCccchheeehhhHhHHHHHHHHccCccccccccccchHHHH-HHHHHHHHHHH
Confidence 5788888899998888765543 445555543333333334444444443 333 35666777766
Q ss_pred HhcHhhhhcCCCCcce-eecC-c-cccccccchHHHHHHHhcC------CCCCchHHHHHHHHHHHHHccC----CCCCC
Q 022382 90 KAGRRLANRGRCPLMY-EWHG-K-KYWGAAHGLAGIMHVLMDM------ELKPDEVEDVKGTLRYMIKNRF----PSGNY 156 (298)
Q Consensus 90 ~~~~~~~~~~~~~~~~-~~~~-~-~~~G~aHG~aGi~~~L~~~------~~~~~~~~~i~~~l~~~~~~~~----~~g~w 156 (298)
-... .....|... .+.. . ...+-....|++....+.+ ...+.+.+.++++.+.+.+.+- ..|-|
T Consensus 146 pAFd---TptgiP~~~vnl~~~~~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~GL~ 222 (503)
T 1hcu_A 146 VAFT---TPSGVPDPTVFFNPTVRRSGASSNNVAEIGSLVLEWTRLSDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLI 222 (503)
T ss_dssp GGGC---SSSSCCCSEEECSSSCEECCCSEEEHHHHTTSHHHHHHHHHHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBC
T ss_pred Hhhc---CCCCCCcceeecccCCCCCCCCccccccccceeeehHHHHHHhCChHHHHHHHHHHHHHHhhhcccCCCCCce
Confidence 5432 111223211 1111 0 0011112345554433333 2235577888888887765332 35667
Q ss_pred CCCCCCCCCcccccccCchhHH-----H--HHHHHHHHhCc--HHHHHHHHHHHHHHHH
Q 022382 157 PSSEGSESDRLVHWCHGAPGVT-----L--TLAKAAEVFGE--KEFLQAAVDAGEVVWK 206 (298)
Q Consensus 157 ~~~~~~~~~~~~~wChG~~Gi~-----~--~l~~~~~~~~~--~~~~~~~~~~~~~~~~ 206 (298)
|...+. ....|.....|+. + .+++.+-.+++ +.+.+.-+++.+.+.+
T Consensus 223 p~~i~~---~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~~~~y~~m~~~a~~~i~~ 278 (503)
T 1hcu_A 223 GTFVST---SNGTFQDSSGSWSGLMDSFYEYLIKMYLYDPVAFAHYKDRWVLGADSTIG 278 (503)
T ss_dssp CSEEET---TTCCBCCCEECSSTTTHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHHH
T ss_pred eeEEeC---CCCcccCCeeeecCCCccHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 754321 1234555544443 2 46666666664 4677666666665544
No 37
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=76.40 E-value=3 Score=38.63 Aligned_cols=173 Identities=14% Similarity=0.021 Sum_probs=85.9
Q ss_pred CChHHHHHHHHHHhh-ccCCCCCCcccccchHHHHHHHHHHhhhh------CCCcCcHHHHHHHHHHHHHhcHhhhhcCC
Q 022382 28 GDERLLDHYLTKFKE-IKLPSDLPNELLYGRVGFLWACSFLNKHM------GKDTISTAQMRAVVDEIIKAGRRLANRGR 100 (298)
Q Consensus 28 ~~~~~~~~~~~~~~~-~~~~~~~~~d~~~G~aGil~~l~~l~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 100 (298)
|..+..+++.+.+.+ +.+..+...+++-=+.=++=.|+..|..+ +++.++ +.+.+++++|+-.... ....
T Consensus 71 gl~~Ef~~A~~~V~~~l~F~~d~~VsvFETtIR~LGGLLSAy~Ls~~~~~~~d~~lL-~kA~dLadrLlpAFd~--Tptg 147 (511)
T 1dl2_A 71 EFEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEVGNKTVYL-NKAIDLGDRLALAFLS--TQTG 147 (511)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCSSEEEHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHH-HHHHHHHHHHHGGGGS--SSSS
T ss_pred CcHHHHHHHHHHHHHhcCCCCCceechhheehhhhhhhhhHHHhcccccCCCcHHHH-HHHHHHHHHHHHhhcC--CCCC
Confidence 555566777777665 55554444554432222222333334444 454555 4777888888765430 1112
Q ss_pred CCcce-eec-Cc-cccccccc---hHHHHHHHhcC---C---CCCchHHHHHHHHHHHHHcc----CCCCCCCCCCCCCC
Q 022382 101 CPLMY-EWH-GK-KYWGAAHG---LAGIMHVLMDM---E---LKPDEVEDVKGTLRYMIKNR----FPSGNYPSSEGSES 164 (298)
Q Consensus 101 ~~~~~-~~~-~~-~~~G~aHG---~aGi~~~L~~~---~---~~~~~~~~i~~~l~~~~~~~----~~~g~w~~~~~~~~ 164 (298)
.|... .+. +. .......| .|++....+.+ . ..+.+.+.++++.+.+.+.+ -..|-||...+..
T Consensus 148 iP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~~~~l~~~~~~~~~~~GL~p~~i~~~- 226 (511)
T 1dl2_A 148 IPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPD- 226 (511)
T ss_dssp CCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHTTHHHHHHHHTHHHHHTTCCBSEECTT-
T ss_pred CCCceeecccCCCCCCCCCCcccccccccceeeeHHHHHHHHCChHHHHHHHHHHHHHHhcccccCCCCCCcceEEcCC-
Confidence 33211 111 00 01111222 44544332222 2 23446677777777665543 2357777543211
Q ss_pred CcccccccCchhH-----HH--HHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 022382 165 DRLVHWCHGAPGV-----TL--TLAKAAEVFGEKEFLQAAVDAGEVVWK 206 (298)
Q Consensus 165 ~~~~~wChG~~Gi-----~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (298)
...|.....|+ -+ .+++.+-.++++.+.+.-+++.+.+.+
T Consensus 227 --tg~~~~~~~~lGa~~DS~YEYLlK~~il~~d~~y~~m~~~a~~~i~~ 273 (511)
T 1dl2_A 227 --TGKFGASTIRFGSRGDSFYEYLLKQYLLTHETLYYDLYRKSMEGMKK 273 (511)
T ss_dssp --TCCBCSCCBCSSTTTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred --CCCccCCeeeecCCCCcHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 12344333333 22 466666667888888887777776654
No 38
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=74.54 E-value=49 Score=29.81 Aligned_cols=168 Identities=13% Similarity=0.157 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHcC--ChHHHHHHHHHHhhc-----cCCCCCCcccccchHH----HHHHHHHHhhhhCCCcCcHHHHHHH
Q 022382 16 VCALGAVLAKHAG--DERLLDHYLTKFKEI-----KLPSDLPNELLYGRVG----FLWACSFLNKHMGKDTISTAQMRAV 84 (298)
Q Consensus 16 i~~~l~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~d~~~G~aG----il~~l~~l~~~~~~~~~~~~~~~~~ 84 (298)
.+.+++..+.+++ |+.+.++.++.++++ +.+......-+.+.+| ..++...|++.+++++|++ .+...
T Consensus 158 ~AAalAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~~~~~~~Y~ss~~~DE~~WAAa~Ly~aTgd~~Yl~-~a~~~ 236 (441)
T 1ia6_A 158 TSAALTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGVGNGQSFYQATSFGDDLAWAATWLYTATNDSTYIT-DAEQF 236 (441)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSCCCCTTTSCCCCSHHHHHHHHHHHHHHHCCTHHHH-HHHHH
T ss_pred HHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHHHHHHHhCCHHHHH-HHHHH
Confidence 4677777777776 677777766666554 1111111111223333 5788889999999988764 33332
Q ss_pred HHHHHHhcHhhhhcCCCCcceeecCccccccccchHHHHHHHhcCCCCCchHHHHHHHHHHHHHcc-C-CCCCCCCCCCC
Q 022382 85 VDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNR-F-PSGNYPSSEGS 162 (298)
Q Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~i~~~l~~~~~~~-~-~~g~w~~~~~~ 162 (298)
............ ..... ..|.+. .+|....|.+......+.+.+++.+++..... . +.| +.
T Consensus 237 ~~~~~~~~~~~~-~~~~~--~~Wd~~--------~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~~~~tp~G-l~----- 299 (441)
T 1ia6_A 237 ITLGNTMNENKM-QDKWT--MCWDDM--------YVPAALRLAQITGKQIYKDAIEFNFNYWKTQVTTTPGG-LK----- 299 (441)
T ss_dssp TTC------CGG-GCSSC--SSSSCC--------HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTSCBCTTS-CB-----
T ss_pred Hhhhhhcccccc-cCCCc--CCccch--------HHHHHHHHHhccCcHHHHHHHHHHHHHHHhhcccCCCC-ce-----
Confidence 211110000000 00000 112221 35555545544222345666777666654311 1 122 11
Q ss_pred CCCcccccccCch----hHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 022382 163 ESDRLVHWCHGAP----GVTLTLAKAAEVFGEKEFLQAAVDAGEVVWK 206 (298)
Q Consensus 163 ~~~~~~~wChG~~----Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (298)
....| |.. ..++......+.++++++.+.+++.++++.-
T Consensus 300 ---~~~~W--Gs~~~~~~~a~l~~~~~~~~~~~~y~~~A~~qldYiLG 342 (441)
T 1ia6_A 300 ---WLSNW--GVLRYAAAESMVMLVYCKQNPDQSLLDLAKKQVDYILG 342 (441)
T ss_dssp ---CCCST--THHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHT
T ss_pred ---ecCCc--chHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcC
Confidence 11346 443 3334444446678899999999999999874
No 39
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=71.58 E-value=35 Score=31.11 Aligned_cols=174 Identities=15% Similarity=0.084 Sum_probs=88.5
Q ss_pred HcCChHHHHHHHHHHhhccCCC-CCCcccccchHHHHHHHHHHhhhh-CC-----------CcCcHHHHHHHHHHHHHhc
Q 022382 26 HAGDERLLDHYLTKFKEIKLPS-DLPNELLYGRVGFLWACSFLNKHM-GK-----------DTISTAQMRAVVDEIIKAG 92 (298)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~G~aGil~~l~~l~~~~-~~-----------~~~~~~~~~~~~~~l~~~~ 92 (298)
+.|..+..+++.+.+.++.+.. +...+++-=+.=++=.|+..+..+ ++ +.++ +.+.+++++|+-..
T Consensus 57 IMgl~~Ef~~a~~~v~~~~f~~~~~~vsvFETtIR~LGGLLSAy~Ls~g~~~~~~~~~~~~~~lL-~kA~dLadrLlpAF 135 (475)
T 2ri9_A 57 IMGKADVVNAILEHVADIDFSKTSDTVSLFETTIRYLAGMLSGYDLLQGPAKNLVDNQDLIDGLL-DQSRNLADVLKFAF 135 (475)
T ss_dssp HHTCHHHHHHHHHHHHHCCTTCCSSCEEHHHHHHHHHHHHHHHHHHHHTTTTTSCCCHHHHHHHH-HHHHHHHHHHGGGG
T ss_pred hcCCHHHHHHHHHHHHhCCCCcCCCccchhheehHhHhHHhHHHHhccCccccccccccchHHHH-HHHHHHHHHHHHhh
Confidence 4688888889998888776654 555665543322333333444444 33 2233 35666777766543
Q ss_pred HhhhhcCCCCcce-eecC-ccccccccchHHHHHHHhcC------CCCCchHHHHHHHHHHHHHcc--C---CCCCCCCC
Q 022382 93 RRLANRGRCPLMY-EWHG-KKYWGAAHGLAGIMHVLMDM------ELKPDEVEDVKGTLRYMIKNR--F---PSGNYPSS 159 (298)
Q Consensus 93 ~~~~~~~~~~~~~-~~~~-~~~~G~aHG~aGi~~~L~~~------~~~~~~~~~i~~~l~~~~~~~--~---~~g~w~~~ 159 (298)
. .....|... .+.. ....+-....|++....+.+ ...+.+.+.++++.+.+.+.+ . ..|-||..
T Consensus 136 ~---TptgiP~~~vnl~~~~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~~GL~p~~ 212 (475)
T 2ri9_A 136 D---TPSGVPYNNINITSHGNDGATTNGLAVTGTLVLEWTRLSDLTGDEEYAKLSQKAESYLLKPQPSSSEPFPGLVGSS 212 (475)
T ss_dssp C---SSSSCCCSEECTTTCCBCCCSEEEHHHHHSCHHHHHHHHHHHSCTHHHHHHHHHHHHHHSCSSGGGCSBTTBCCSE
T ss_pred c---CCCCCCCceeecccCCCcCCCccchhccccceeeHHHHHHHhCCHHHHHHHHHHHHHHHhhccccccCCCCCcceE
Confidence 2 111223211 1110 00111112356665433333 223557788888888776543 1 35667754
Q ss_pred CCCCCCcccccccCchhHH-----H--HHHHHHHHhCc--HHHHHHHHHHHHHHHH
Q 022382 160 EGSESDRLVHWCHGAPGVT-----L--TLAKAAEVFGE--KEFLQAAVDAGEVVWK 206 (298)
Q Consensus 160 ~~~~~~~~~~wChG~~Gi~-----~--~l~~~~~~~~~--~~~~~~~~~~~~~~~~ 206 (298)
.+. ....|.....|+. + .+++.+-.+++ +.+.+.-+++.+.+.+
T Consensus 213 i~~---~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~~~~~~~m~~~a~~~i~~ 265 (475)
T 2ri9_A 213 INI---NDGQFADSRVSWNGGDDSFYEYLIKMYVYDPKRFETYKDRWVLAAESTIK 265 (475)
T ss_dssp EET---TTCCBCCCCBCSSTTTHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHHH
T ss_pred EeC---CCCcccCCceeecCCcchHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 321 1233554444332 2 46666666664 4677666666666544
No 40
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=62.72 E-value=24 Score=32.74 Aligned_cols=76 Identities=18% Similarity=0.183 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh-----cCC-----------CCCcccc--chhh---HHHHHHHHHHHhCC
Q 022382 177 VTLTLAKAAEVFGEKEFLQAAVDAGEVVWKR-----GLL-----------KRVGICH--GISG---NTYVFLSLYRLTGN 235 (298)
Q Consensus 177 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-----------~~~~lCH--G~aG---~~~~l~~l~~~~~~ 235 (298)
++=.|+.++..++|+.+++.|.+..+.+... +.. .++.+-. ..|+ ..+=+..|++.|||
T Consensus 174 ~LGGLLSAy~Lsgd~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTGd 253 (538)
T 1x9d_A 174 ILGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTGD 253 (538)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSTTSCCCSEEETTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHCC
T ss_pred hhhhhhhHHHhcCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeeecccccCCCCcCCCceeccccceeeeHHHHHHHhCC
Confidence 4446788888899999999999888876431 110 0111111 0222 22335678999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 022382 236 VEYLYRAKAFACFLYDR 252 (298)
Q Consensus 236 ~~~~~~~~~~~~~~~~~ 252 (298)
++|.+.++++.+.+.+.
T Consensus 254 ~~Y~~~a~r~~~~l~~~ 270 (538)
T 1x9d_A 254 KKFQEAVEKVTQHIHGL 270 (538)
T ss_dssp THHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHHhc
Confidence 99999999887766653
No 41
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=62.01 E-value=45 Score=29.95 Aligned_cols=69 Identities=17% Similarity=0.171 Sum_probs=38.6
Q ss_pred HHHHHHHHHHhC--cHHHHHHHHHHHHHHHHhcC--CC-----CC--ccccchhh----HHHHHHHHHHHhCCHHHHHHH
Q 022382 178 TLTLAKAAEVFG--EKEFLQAAVDAGEVVWKRGL--LK-----RV--GICHGISG----NTYVFLSLYRLTGNVEYLYRA 242 (298)
Q Consensus 178 ~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~-----~~--~lCHG~aG----~~~~l~~l~~~~~~~~~~~~~ 242 (298)
+-+++.+..+++ |+.|.+...++.+.+++... .. .+ +=..+..| .+..-..|++.||++.|++.+
T Consensus 156 AAalA~as~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~Y~ss~~~DE~~WAAa~Ly~aTgd~~Yl~~~ 235 (433)
T 1ks8_A 156 AAALAAASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYASADYRDELVWAAAWLYRATNDNTYLNTA 235 (433)
T ss_dssp HHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGGGTSCCCCTHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCCCCCCCCCcccHHHHHHHHHHHHhCCHHHHHHH
Confidence 345666666665 56665555554444443210 00 00 00112244 456667789999999999888
Q ss_pred HHHH
Q 022382 243 KAFA 246 (298)
Q Consensus 243 ~~~~ 246 (298)
+...
T Consensus 236 ~~~~ 239 (433)
T 1ks8_A 236 ESLY 239 (433)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7643
No 42
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=59.83 E-value=92 Score=30.05 Aligned_cols=93 Identities=10% Similarity=0.123 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHhhhhCCCc--CcHHHHHHHHHHHHHhcHhhhhcCCCCcceeecCccccccccchHHHHHHHhcCCCCCc
Q 022382 57 RVGFLWACSFLNKHMGKDT--ISTAQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPD 134 (298)
Q Consensus 57 ~aGil~~l~~l~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~ 134 (298)
++-++.+|..+.+..+..+ -....+++.+++|.+.....+ .|.+.--..+.+|.+-.+.+|..+.....
T Consensus 534 Ta~vL~aL~~~~~~~~~~~~~~~~~~i~rAv~yL~~~Q~~DG---------sW~g~wg~~~~Y~T~~al~AL~~aG~~~~ 604 (732)
T 1w6k_A 534 TSAVMQALKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADG---------SWEGSWGVCFTYGTWFGLEAFACMGQTYR 604 (732)
T ss_dssp HHHHHHHHHHHHHHCTTSSHHHHHHHHHHHHHHHHHHSCTTS---------CCCCSSBSSHHHHHHHHHHHHHHTTCCCB
T ss_pred HHHHHHHHHHhccccccccchhhHHHHHHHHHHHHhhcCCCC---------CccCcCCCccchHHHHHHHHHHHhCCccc
Confidence 4445556655544322211 012356777777776532211 12111112355677667777777765422
Q ss_pred ---hHHHHHHHHHHHHHccCCCCCCCC
Q 022382 135 ---EVEDVKGTLRYMIKNRFPSGNYPS 158 (298)
Q Consensus 135 ---~~~~i~~~l~~~~~~~~~~g~w~~ 158 (298)
..+.++++++|+++.+.++|.|..
T Consensus 605 ~~~~~~~i~rav~~Lls~Q~~DGGWge 631 (732)
T 1w6k_A 605 DGTACAEVSRACDFLLSRQMADGGWGE 631 (732)
T ss_dssp TTBCCHHHHHHHHHHHTTCCTTSCCCB
T ss_pred ccchhHHHHHHHHHHHHhcccCCCCCC
Confidence 226788999999987777888864
No 43
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=58.80 E-value=30 Score=29.92 Aligned_cols=78 Identities=19% Similarity=0.218 Sum_probs=52.1
Q ss_pred cCchhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCCC---Cccccchhh--------------HHHHHHHHHHHhC
Q 022382 172 HGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKR---VGICHGISG--------------NTYVFLSLYRLTG 234 (298)
Q Consensus 172 hG~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~lCHG~aG--------------~~~~l~~l~~~~~ 234 (298)
.|..=|+.+|+.+.+..+++.|.+++++.++.+.+...... .-|.=|.-| +..++..+++.++
T Consensus 106 DgDl~IA~ALl~A~~~Wg~~~Y~~~A~~il~~i~~~~v~~~~g~~~llPg~~gf~~~~~~~~npSY~~p~~~~~fa~~~~ 185 (334)
T 1wzz_A 106 DGDLLIALALGRAGKRFQRPDYIQDAMAIYGDVLNLMTMKAGPYVVLMPGAVGFTKKDSVILNLSYYVMPSLLQAFDLTA 185 (334)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHEEEETTEEEECSCSSSCBCSSEEEECGGGCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcccCCCCeEEECCCcccccCCCCCeechhhcCHHHHHHHHHccC
Confidence 45556899999999999999999999999988877533110 112122211 2356666778888
Q ss_pred CHHHHHHHHHHHHHH
Q 022382 235 NVEYLYRAKAFACFL 249 (298)
Q Consensus 235 ~~~~~~~~~~~~~~~ 249 (298)
+..|.+.++.-.+.+
T Consensus 186 ~~~W~~~~~~~~~ll 200 (334)
T 1wzz_A 186 DPRWRQVMEDGIRLV 200 (334)
T ss_dssp CTHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHH
Confidence 877777665544433
No 44
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=56.97 E-value=31 Score=31.85 Aligned_cols=76 Identities=21% Similarity=0.150 Sum_probs=49.3
Q ss_pred HHHHHHHHHHh------CcHHHHHHHHHHHHHHH---H-hc--CC-----------CCCccccc---hhhH---HHHHHH
Q 022382 178 TLTLAKAAEVF------GEKEFLQAAVDAGEVVW---K-RG--LL-----------KRVGICHG---ISGN---TYVFLS 228 (298)
Q Consensus 178 ~~~l~~~~~~~------~~~~~~~~~~~~~~~~~---~-~~--~~-----------~~~~lCHG---~aG~---~~~l~~ 228 (298)
+=.|+.++..+ +|+.+++.|.+..+.+. + .. .. ..+.+-.| .|+. .+=+..
T Consensus 105 LGGLLSAy~Ls~~~~~~~d~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~ 184 (511)
T 1dl2_A 105 LGGLLSAYHLSDVLEVGNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKY 184 (511)
T ss_dssp HHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHH
T ss_pred hhhhhhHHHhcccccCCCcHHHHHHHHHHHHHHHHhhcCCCCCCCCceeecccCCCCCCCCCCcccccccccceeeeHHH
Confidence 33566777777 78899999998887764 2 21 10 01112222 2222 233567
Q ss_pred HHHHhCCHHHHHHHHHHHHHHHHHH
Q 022382 229 LYRLTGNVEYLYRAKAFACFLYDRA 253 (298)
Q Consensus 229 l~~~~~~~~~~~~~~~~~~~~~~~~ 253 (298)
|++.|||++|.+.++++.+.+.+..
T Consensus 185 LS~LTGd~~Y~~~a~r~~~~l~~~~ 209 (511)
T 1dl2_A 185 LAYLTGNRTYWELVERVYEPLYKNN 209 (511)
T ss_dssp HHHHHTCHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHCChHHHHHHHHHHHHHHhcc
Confidence 8999999999999999888777653
No 45
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=48.87 E-value=1.5e+02 Score=27.84 Aligned_cols=70 Identities=14% Similarity=0.312 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHhcHhhhhcCCCCcceeecCccccccccchHHHHHHHhcCCCCCchHHHHHHHHHHHHHccCCCCCCCC
Q 022382 79 AQMRAVVDEIIKAGRRLANRGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFPSGNYPS 158 (298)
Q Consensus 79 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~i~~~l~~~~~~~~~~g~w~~ 158 (298)
..+++.++.|.+..... .. |.+.....+.++.+-++.+|..+.... ..+.++++++|+++.+.++|.|..
T Consensus 466 ~~i~rai~~L~~~Q~~D---Gs------w~g~wg~~~~y~Ta~~l~aL~~~g~~~-~~~~i~rav~~L~s~Q~~DGgWg~ 535 (631)
T 2sqc_A 466 KVIRRAVEYLKREQKPD---GS------WFGRWGVNYLYGTGAVVSALKAVGIDT-REPYIQKALDWVEQHQNPDGGWGE 535 (631)
T ss_dssp HHHHHHHHHHHHHCCTT---SC------CCCSSBSSHHHHHHHHHHHHHHTTCCT-TSHHHHHHHHHHHHTCCTTSCCCC
T ss_pred HHHHHHHHHHHHhcCCC---CC------CCCCCCCCchHHHHHHHHHHHHhCCcc-cHHHHHHHHHHHHHhCcCCCCcCC
Confidence 46778888887653211 11 211112334567777777777765432 346788899999987777888854
No 46
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=48.24 E-value=70 Score=30.90 Aligned_cols=88 Identities=14% Similarity=0.149 Sum_probs=47.6
Q ss_pred HHHHHHHhcCCCC------CchHHHHHHHHHHHHHccCCCCCCCCCCCCCCCc----------cccc--cc----CchhH
Q 022382 120 AGIMHVLMDMELK------PDEVEDVKGTLRYMIKNRFPSGNYPSSEGSESDR----------LVHW--CH----GAPGV 177 (298)
Q Consensus 120 aGi~~~L~~~~~~------~~~~~~i~~~l~~~~~~~~~~g~w~~~~~~~~~~----------~~~w--Ch----G~~Gi 177 (298)
+-++.+|..+.+. ....+.++++++|+++.+.++|.|.......... ...| ++ .++-+
T Consensus 458 A~vl~aL~~~~~~~~~~g~~~~~~~i~~av~wLls~Q~~DGgw~a~~~~~~~~~l~~i~~~e~fg~~~~d~s~v~~Ta~v 537 (732)
T 1w6k_A 458 AEALKAVLLLQEKCPHVTEHIPRERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAV 537 (732)
T ss_dssp HHHHHHHHHHHHHCTTCCSCCCHHHHHHHHHHHHTTCCTTSCBCSSSCCCSCGGGGGGCCCSSCSSCSSCCCBHHHHHHH
T ss_pred HHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHhcCCCCCEEeecCCCchHHHhhCcchhcccccccCCCcchHHHHH
Confidence 3355555555321 2346788999999997666888886322111000 0011 11 12234
Q ss_pred HHHHHHHHHHh---CcHHHHHHHHHHHHHHHHh
Q 022382 178 TLTLAKAAEVF---GEKEFLQAAVDAGEVVWKR 207 (298)
Q Consensus 178 ~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~ 207 (298)
+.+|..+.+.. ..++..+.++++++.+.+.
T Consensus 538 L~aL~~~~~~~~~~~~~~~~~~i~rAv~yL~~~ 570 (732)
T 1w6k_A 538 MQALKYFHKRFPEHRAAEIRETLTQGLEFCRRQ 570 (732)
T ss_dssp HHHHHHHHHHCTTSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccccccccchhhHHHHHHHHHHHHhh
Confidence 44555554432 2255677888888888764
No 47
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=46.10 E-value=1.2e+02 Score=27.66 Aligned_cols=113 Identities=12% Similarity=0.074 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcC---C---------CCCccccchhhHHHHHHHHHHHhCCHHHHHHHHH
Q 022382 177 VTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGL---L---------KRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKA 244 (298)
Q Consensus 177 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~lCHG~aG~~~~l~~l~~~~~~~~~~~~~~~ 244 (298)
.++++..++...+|+.+.+.+....... ++ . ...+=|+ ..=.++.++.+++.++++.|++.|++
T Consensus 378 yll~~vra~~~s~D~~Lw~~~~~ma~~~---~lgdi~~~~~~~~~~~~~~~~~-sp~lL~allEL~~atq~~~~l~lA~~ 453 (543)
T 2v8i_A 378 FLISYARAYAIDNDPLLWKVARGIANDQ---GLGDIGTAPGKEVKVNMDTTNS-DPYALFALLDLYHASQVADYRKLAEK 453 (543)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHT---TCEECTTBTTBSCEECTTCCCC-CHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHhhC---CccccCCCcCcccccccCCCCc-CHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 7788999999999999988887654422 11 0 0111122 23467888999999999999999999
Q ss_pred HHHHHHHHHhhhhhccCC-CCCCCcc-ccccchHHHHHHHHHccCCCCCCCCCC
Q 022382 245 FACFLYDRAQKLIAEGKM-HGGDRPY-SLFEGIGGMTHLFLDMIEPSEARFPAY 296 (298)
Q Consensus 245 ~~~~~~~~~~~~~~~g~~-~~~~~~~-gl~~G~sGi~~~Ll~~~~~~~~~~~~~ 296 (298)
+.+.++++.-. .|-+ .+...-+ -+=.=..=.+++|...++.....+|.+
T Consensus 454 ~g~nl~~~~~~---~G~Fv~s~~h~y~r~Dd~~PlALL~L~Aa~~gk~~~ip~~ 504 (543)
T 2v8i_A 454 IGDNIIKIRYI---DGFFMASSDRQYADVDAIEPYALLALEASLRNKPQAVAPF 504 (543)
T ss_dssp HHHHHHHHHEE---TTEECSSTTBSCEETTCSHHHHHHHHHHHHTTCGGGSCCC
T ss_pred HHHHHHHHhhc---CceecCChhhhccccCCchhHHHHHHHHHhcCChhccCce
Confidence 99988875321 2211 1111111 111222334556666667666777654
No 48
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=44.34 E-value=1.7e+02 Score=27.57 Aligned_cols=69 Identities=19% Similarity=0.163 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHhc-----CCC----CCccccchhh----HHHHHHHHHHHhCCHHHHHH
Q 022382 177 VTLTLAKAAEVFG--EKEFLQAAVDAGEVVWKRG-----LLK----RVGICHGISG----NTYVFLSLYRLTGNVEYLYR 241 (298)
Q Consensus 177 i~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~----~~~lCHG~aG----~~~~l~~l~~~~~~~~~~~~ 241 (298)
.+-+++.+..+++ |+.|.+...++.+.+|+.. ... ..+=..+..| .+..-..||+.||++.|++.
T Consensus 222 ~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~~~y~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~ 301 (611)
T 2yik_A 222 TAASLAINYMNFKDTDPQYAAKSLDYAKALFDFAEKNPKGVVQGEDGPKGYYGSSKWQDDYCWAAAWLYLATQNEHYLDE 301 (611)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCCCCGGGTTTTTSCCCCSHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCcccCCCcccCcCCCCCCcccHHHHHHHHHHHHhCCHHHHHH
Confidence 3445777777775 5666555555445444321 110 0111122333 35666778999999999988
Q ss_pred HHHH
Q 022382 242 AKAF 245 (298)
Q Consensus 242 ~~~~ 245 (298)
+...
T Consensus 302 a~~~ 305 (611)
T 2yik_A 302 AFKY 305 (611)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 49
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=34.33 E-value=1.2e+02 Score=27.64 Aligned_cols=75 Identities=13% Similarity=-0.053 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHhhcc---CCC----CC--CcccccchHHHHHHHHHHhhhhCCCcCcHHHHHHHHH
Q 022382 16 VCALGAVLAKHAGDERLLDHYLTKFKEIK---LPS----DL--PNELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVD 86 (298)
Q Consensus 16 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~--~~d~~~G~aGil~~l~~l~~~~~~~~~~~~~~~~~~~ 86 (298)
.++.+...|...+|++.-+.+...+.... +.+ .. +.+--.-..=.+++++.+++.++++++. +.+.++++
T Consensus 378 yll~~vra~~~s~D~~Lw~~~~~ma~~~~lgdi~~~~~~~~~~~~~~~~~sp~lL~allEL~~atq~~~~l-~lA~~~g~ 456 (543)
T 2v8i_A 378 FLISYARAYAIDNDPLLWKVARGIANDQGLGDIGTAPGKEVKVNMDTTNSDPYALFALLDLYHASQVADYR-KLAEKIGD 456 (543)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHTTCEECTTBTTBSCEECTTCCCCCHHHHHHHHHHHHHHCCHHHH-HHHHHHHH
T ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHhhCCccccCCCcCcccccccCCCCcCHHHHHHHHHHHHHhCCHHHH-HHHHHHHH
Confidence 56677788999999998888888776541 211 01 1111122345688999999999998887 58889999
Q ss_pred HHHHh
Q 022382 87 EIIKA 91 (298)
Q Consensus 87 ~l~~~ 91 (298)
.|+++
T Consensus 457 nl~~~ 461 (543)
T 2v8i_A 457 NIIKI 461 (543)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98874
No 50
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=33.34 E-value=1.7e+02 Score=26.99 Aligned_cols=113 Identities=14% Similarity=0.161 Sum_probs=57.7
Q ss_pred CchHHHHHHHHHHHHHccC-C---------CCCCCCC--CCCC-CCcccc--cccC-chhHHHHHHHHHHHhCc--H---
Q 022382 133 PDEVEDVKGTLRYMIKNRF-P---------SGNYPSS--EGSE-SDRLVH--WCHG-APGVTLTLAKAAEVFGE--K--- 191 (298)
Q Consensus 133 ~~~~~~i~~~l~~~~~~~~-~---------~g~w~~~--~~~~-~~~~~~--wChG-~~Gi~~~l~~~~~~~~~--~--- 191 (298)
++.++.|+=.++|+++.+. + +..|+.. .++. ...+.. -+-- +.-.+-+++.+..++++ +
T Consensus 188 ~d~ldeikwg~D~llk~~~~~~g~~y~~v~~~~w~g~~~~Pe~~~~~R~~~~~~t~~~~~~AAalA~as~vf~~~D~~yA 267 (537)
T 3gzk_A 188 PPALEVAREEIAWLLTMQDPATGGVYHKVTTPSFPPLDTRPEDDDAPLVLSPISYAATATFCAAMAHAALVYRPFDPALS 267 (537)
T ss_dssp CHHHHHHHHHHHHHHHTBCTTTCCBBSEEECSSCCCTTCCGGGCCSCEEECCBCHHHHHHHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCCeEEEEecCCCcCCCCcCcccCCCcceEeecCCcHHHHHHHHHHHHHHhhcccCHHHH
Confidence 4567888888899997443 2 1236321 1111 111111 1111 22244457777777774 4
Q ss_pred -HHHHHHHHHHHHHHHhcC--CCC--Cccccc--hhh----HHHHHHHHHHHhCCHHHHHHHHHH
Q 022382 192 -EFLQAAVDAGEVVWKRGL--LKR--VGICHG--ISG----NTYVFLSLYRLTGNVEYLYRAKAF 245 (298)
Q Consensus 192 -~~~~~~~~~~~~~~~~~~--~~~--~~lCHG--~aG----~~~~l~~l~~~~~~~~~~~~~~~~ 245 (298)
++++.|+++.+...+..- ..+ ...++- ..| .+.....|++.|+++.|++.+...
T Consensus 268 ~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~~~~~Del~wAA~~Ly~aTgd~~Yl~~a~~~ 332 (537)
T 3gzk_A 268 SCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGDAELRDELLWASCALLRMTGDSAWARVCEPL 332 (537)
T ss_dssp HHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCCSCCHHHHHHHHHHHHHHHCCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccccccCCcccccCCcCCCccchHHHHHHHHHHHHhCCHHHHHHHHHh
Confidence 455555555444433211 011 111111 111 566777899999999999887654
No 51
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=33.11 E-value=48 Score=30.24 Aligned_cols=218 Identities=14% Similarity=0.065 Sum_probs=107.6
Q ss_pred hHHHHHHHHHHhhc--cCCCCC--Cc---------------ccccchHHHHHHHHHHhhhhCCCcCcHHHHHHHHHHHHH
Q 022382 30 ERLLDHYLTKFKEI--KLPSDL--PN---------------ELLYGRVGFLWACSFLNKHMGKDTISTAQMRAVVDEIIK 90 (298)
Q Consensus 30 ~~~~~~~~~~~~~~--~~~~~~--~~---------------d~~~G~aGil~~l~~l~~~~~~~~~~~~~~~~~~~~l~~ 90 (298)
+.+++.|.++.+.+ -+.+.. ++ ..+.+...+.+=+..+.+.++|++|. +.++++.+.+.+
T Consensus 118 ~~lL~kA~dLadrLlpAF~TptgiP~~~vnl~~~~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~-~~a~~~~~~l~~ 196 (475)
T 2ri9_A 118 DGLLDQSRNLADVLKFAFDTPSGVPYNNINITSHGNDGATTNGLAVTGTLVLEWTRLSDLTGDEEYA-KLSQKAESYLLK 196 (475)
T ss_dssp HHHHHHHHHHHHHHGGGGCSSSSCCCSEECTTTCCBCCCSEEEHHHHHSCHHHHHHHHHHHSCTHHH-HHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCceeecccCCCcCCCccchhccccceeeHHHHHHHhCCHHHH-HHHHHHHHHHHh
Confidence 57888888888765 121111 10 12233333456677888999999987 477777766654
Q ss_pred hcH-h-hhhcCCCCcceeec-C---ccccccccchHHHHHHHhcCCC-C--C--chHHHHHHHHHHHHHccC--C--CCC
Q 022382 91 AGR-R-LANRGRCPLMYEWH-G---KKYWGAAHGLAGIMHVLMDMEL-K--P--DEVEDVKGTLRYMIKNRF--P--SGN 155 (298)
Q Consensus 91 ~~~-~-~~~~~~~~~~~~~~-~---~~~~G~aHG~aGi~~~L~~~~~-~--~--~~~~~i~~~l~~~~~~~~--~--~g~ 155 (298)
... . .......|..+... + ....++.-|.=..-=.|++.+. . . .+.+.-.++++-+.++.. + ...
T Consensus 197 ~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~~~~~~~m~~~a~~~i~~~l~~~~~~~~~ 276 (475)
T 2ri9_A 197 PQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFYEYLIKMYVYDPKRFETYKDRWVLAAESTIKHLKSHPKSRPD 276 (475)
T ss_dssp CSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHHHHTEECCSSCTT
T ss_pred hccccccCCCCCcceEEeCCCCcccCCceeecCCcchHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 320 0 00011222221100 1 1234444444344334555442 1 1 234444445544443222 1 011
Q ss_pred --CCCCCC-----CCCCcccccccCchhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH------hcCCCC---Cccccc-
Q 022382 156 --YPSSEG-----SESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWK------RGLLKR---VGICHG- 218 (298)
Q Consensus 156 --w~~~~~-----~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~---~~lCHG- 218 (298)
|..... .+......+ .+|+.. + ..+..+++++.+.+++..+..+. .++... ..-|.-
T Consensus 277 ~~~v~~~~~~~~~~~~~hL~cF---~~G~~a-L--gg~~~~~~~~~~~a~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~ 350 (475)
T 2ri9_A 277 LTFLSSYSNRNYDLSSQHLTCF---DGGSFL-L--GGTVLDRQDFIDFGLELVDGCEATYNSTLTKIGPDSWGWDPKKVP 350 (475)
T ss_dssp CCEECEEETTEEECEEETGGGG---HHHHHH-H--HHHHHTCHHHHHHHHHHHHHHHHHHHTSSSSCCCSEEECCTTCCC
T ss_pred ceEEEeccCCccccccchHHHh---HHHHHH-h--cccccccHHHHHHHHHHHHHHHHHHHhcccCCCCcEEEeecCccc
Confidence 100000 011112222 334322 2 22345677787777776655432 133211 222321
Q ss_pred ---------------------hhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Q 022382 219 ---------------------ISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQ 254 (298)
Q Consensus 219 ---------------------~aG~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (298)
..=.+..+-.+|+.|+|++|++.+.++++.+....+
T Consensus 351 ~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~yr~~gw~~f~ai~k~~r 407 (475)
T 2ri9_A 351 SDQKEFYEKAGFYISSGSYVLRPEVIESFYYAHRVTGKEIYRDWVWNAFVAINSTCR 407 (475)
T ss_dssp GGGHHHHHHHSCEEEECCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTB
T ss_pred ccccccccCCCceecccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHc
Confidence 223578888999999999999999988887777654
No 52
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=31.64 E-value=51 Score=30.30 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Q 022382 222 NTYVFLSLYRLTGNVEYLYRAKAFACFLYDRAQ 254 (298)
Q Consensus 222 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (298)
.+..+-.+|+.|||++|++.+.++++.+....+
T Consensus 394 ~iES~fylyR~TgD~~yre~gw~if~ai~k~~r 426 (503)
T 1hcu_A 394 TLESLYYAYRVTGDSKWQDLAWEALSAIEDACR 426 (503)
T ss_dssp HHHHHHHHHHHHCBHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Confidence 578888899999999999999998887777665
No 53
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=30.02 E-value=2.8e+02 Score=24.65 Aligned_cols=72 Identities=14% Similarity=0.142 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCCCCccccchhhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 022382 177 VTLTLAKAAEVFGEKEFLQAAVDAGEVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNVEYLYRAKAFACFLYD 251 (298)
Q Consensus 177 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lCHG~aG~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 251 (298)
.+++-..+++.|+|+.|.+.++......-........+|=-=.+|.... +.+.++++.+++.++...+.++.
T Consensus 215 ~~WAAa~Ly~aTgd~~Yl~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~l---la~~~~~~~~~~~~~~~~~~~~~ 286 (433)
T 1ks8_A 215 LVWAAAWLYRATNDNTYLNTAESLYDEFGLQNWGGGLNWDSKVSGVQVL---LAKLTNKQAYKDTVQSYVNYLIN 286 (433)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHTTGGGSCCCCCSSCCHHHHHHH---HHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCcCcCcCCcCccchhhHHHHH---HhhccChHHHHHHHHHHHHHHHh
Confidence 5788889999999999999997754322111111123332223444222 34567888888888777766664
No 54
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=29.65 E-value=1.6e+02 Score=27.75 Aligned_cols=42 Identities=10% Similarity=0.134 Sum_probs=30.2
Q ss_pred ccchHHHHHHHhcCCCCCchHHHHHHHHHHHHHccCCCCCCCCC
Q 022382 116 AHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFPSGNYPSS 159 (298)
Q Consensus 116 aHG~aGi~~~L~~~~~~~~~~~~i~~~l~~~~~~~~~~g~w~~~ 159 (298)
+--.++.++++.......+ +.+++.+.|+.+++.++|.|...
T Consensus 40 ~~~~~~~v~~~~~~~~~~~--~~~~~~~~yl~~~Q~~dGgW~~~ 81 (631)
T 2sqc_A 40 VTMEAEYVLLCHILDRVDR--DRMEKIRRYLLHEQREDGTWALY 81 (631)
T ss_dssp THHHHHHHHHHHHTTCCCH--HHHHHHHHHHHHHSCTTSCCCSS
T ss_pred chhhHHHHHHHHHhCCCCH--HHHHHHHHHHHHhcCCCCCccCC
Confidence 4456788877777654333 67788889999877788988753
No 55
>1kwf_A Endoglucanase A; hydrolase, inverting glycosidase, atomic resolution, protein-carbohydrate interactions, reaction mechanism, cellulase; HET: BGC; 0.94A {Clostridium thermocellum} SCOP: a.102.1.2 PDB: 1is9_A 1cem_A
Probab=29.50 E-value=1.8e+02 Score=25.25 Aligned_cols=80 Identities=14% Similarity=0.149 Sum_probs=50.1
Q ss_pred cCchhHHHHHHHHHHHhCcH---HHHHHHHHHHHHHHHhcCCCC-Cccccch--hh---------HHHHHHHHHHHhCCH
Q 022382 172 HGAPGVTLTLAKAAEVFGEK---EFLQAAVDAGEVVWKRGLLKR-VGICHGI--SG---------NTYVFLSLYRLTGNV 236 (298)
Q Consensus 172 hG~~Gi~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~lCHG~--aG---------~~~~l~~l~~~~~~~ 236 (298)
.|..=|+.+|+.+.+..+++ +|.+++++.++.+.+...... .-+.=|. .+ +..++..+++.++++
T Consensus 120 DgDl~IA~ALl~A~~~W~~~g~~~Y~~~A~~i~~~i~~~~~~~~~~~l~pg~~~~~~~~~npSY~~p~~~~~fa~~~~~~ 199 (363)
T 1kwf_A 120 DADEDIALALIFADKLWGSSGAINYGQEARTLINNLYNHCVEHGSYVLKPGDRWGGSSVTNPSYFAPAWYKVYAQYTGDT 199 (363)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHBCTTTCCBCSBSSSCBTTBBCGGGCCHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHhccCCCeEEeccccCCCCCEecchhcCHHHHHHHHHccCCc
Confidence 34456899999999999887 899999999888776533111 1111121 11 234455567777887
Q ss_pred HHHHHHHHHHHHHHH
Q 022382 237 EYLYRAKAFACFLYD 251 (298)
Q Consensus 237 ~~~~~~~~~~~~~~~ 251 (298)
.+.+.++.-.+.+.+
T Consensus 200 ~W~~~~~~~~~~l~~ 214 (363)
T 1kwf_A 200 RWNQVADKCYQIVEE 214 (363)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 777666655444433
No 56
>3qxf_A Endoglucanase; cellulase, GH8, cellulose synthesis, cellulose degradation,; 1.85A {Escherichia coli k-12} PDB: 3qxq_A*
Probab=25.44 E-value=90 Score=27.23 Aligned_cols=35 Identities=11% Similarity=0.191 Sum_probs=30.5
Q ss_pred CchhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh
Q 022382 173 GAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKR 207 (298)
Q Consensus 173 G~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (298)
|..=|+++|+.+.+..+++.|..++++.++.+.+.
T Consensus 96 GDl~IA~ALl~A~~~Wg~~~Y~~~A~~il~~I~~~ 130 (355)
T 3qxf_A 96 GDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIARE 130 (355)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 55568999999999999999999999998888764
No 57
>1hzf_A Complement factor C4A; alpha-alpha 6 barrel, immune system; 2.30A {Homo sapiens} SCOP: a.102.4.4
Probab=25.35 E-value=1.6e+02 Score=25.43 Aligned_cols=38 Identities=13% Similarity=0.316 Sum_probs=24.4
Q ss_pred HHHHHhcCCCC-CchHHHHHHHHHHHHHccCCCCCCCCC
Q 022382 122 IMHVLMDMELK-PDEVEDVKGTLRYMIKNRFPSGNYPSS 159 (298)
Q Consensus 122 i~~~L~~~~~~-~~~~~~i~~~l~~~~~~~~~~g~w~~~ 159 (298)
++-+|.++.+. ....+.++++++|+.+.+.++|.|...
T Consensus 126 v~~~l~~a~~~~~v~~~~i~~a~~~L~~~Q~~dG~~~~~ 164 (367)
T 1hzf_A 126 VLKVLSLAQEQVGGSPEKLQETSNWLLSQQQADGSFQDP 164 (367)
T ss_dssp HHHHHHHHGGGTCCCHHHHHHHHHHHGGGBCTTSCBCCS
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHhhccCCCcccc
Confidence 44455544432 223578889999998766678888653
No 58
>3ren_A Glycosyl hydrolase, family 8; (alpha/alpha)6-barrel fold, alpha-amylase; 2.00A {Clostridium perfringens}
Probab=25.23 E-value=91 Score=27.13 Aligned_cols=69 Identities=10% Similarity=0.079 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHccCCCC--CCCCCCCCCCCcccccccCchhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh
Q 022382 137 EDVKGTLRYMIKNRFPSG--NYPSSEGSESDRLVHWCHGAPGVTLTLAKAAEVFGEKEFLQAAVDAGEVVWKR 207 (298)
Q Consensus 137 ~~i~~~l~~~~~~~~~~g--~w~~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (298)
+.-++..+|..++..+++ .|+-.... .. ..+=-.|..=|+.+|+.+.+..++++|.+.|++..+.+.+.
T Consensus 79 ~~Fd~l~~~t~~~l~~~~L~sWr~~~~~-~~-~nNAtdgDl~IA~ALl~A~~~W~~~~Y~~~A~~I~~~i~~~ 149 (350)
T 3ren_A 79 ELFDEHFDIVKEMRLKNGLISWRKEGDE-NS-PSSATIDELRIIKALLLANNRWNSFYYKFYAINIANSLLKH 149 (350)
T ss_dssp HHHHHHHHHHHTTBCTTSSBCSEEETTE-EC-SCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCceEEEECCCC-CC-CCCCcHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 334445566655444444 26532111 11 12222355568999999999999999999999988877664
No 59
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=24.35 E-value=4.4e+02 Score=24.62 Aligned_cols=109 Identities=16% Similarity=0.252 Sum_probs=56.7
Q ss_pred CchHHHHHHHHHHHHHccCCCC----------------CCCC--CCCCCC-Cccccccc-Cch---hHHHHHHHHHHHhC
Q 022382 133 PDEVEDVKGTLRYMIKNRFPSG----------------NYPS--SEGSES-DRLVHWCH-GAP---GVTLTLAKAAEVFG 189 (298)
Q Consensus 133 ~~~~~~i~~~l~~~~~~~~~~g----------------~w~~--~~~~~~-~~~~~wCh-G~~---Gi~~~l~~~~~~~~ 189 (298)
++.++.++=.++|+++.+..++ .|.. .+++.. ..+. .|. |+. -++-+++.+..+++
T Consensus 227 ~d~ldeikwg~D~llk~q~~~g~~~~~~g~v~~~~~D~~w~g~~~~Pe~~~~~R~-~~~p~t~~~~~~AAalAaas~vfk 305 (609)
T 1ut9_A 227 PDILDEARWEIEFFKKMQVTEKEDPSIAGMVHHKIHDFRWTALGMLPHEDPQPRY-LRPVSTAATLNFAATLAQSARLWK 305 (609)
T ss_dssp CHHHHHHHHHHHHHHHHBCCTTTCGGGTTCEECEEEESSCCCSSCCGGGCCSBEE-ECCEEHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhccCCCCcceEEEEecCCCCCcccCCCCCChhhCCCcee-ecCCCcHHHHHHHHHHHHHHHhcc
Confidence 3467788888899997554322 3421 111111 1111 233 222 23445666666664
Q ss_pred --cHHHHHHHHHHHHHHHHh-----cCC-CC---------Cccccchhh----HHHHHHHHHHHhCCHHHHHHHHH
Q 022382 190 --EKEFLQAAVDAGEVVWKR-----GLL-KR---------VGICHGISG----NTYVFLSLYRLTGNVEYLYRAKA 244 (298)
Q Consensus 190 --~~~~~~~~~~~~~~~~~~-----~~~-~~---------~~lCHG~aG----~~~~l~~l~~~~~~~~~~~~~~~ 244 (298)
|+.|.+...+..+.+++. +.. .+ .-+|. .| .+..-..||+.|+|+.|++.++.
T Consensus 306 ~~d~~ya~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~~~~~Y~s--s~~~DEl~WAAawLy~ATgd~~Yl~~a~~ 379 (609)
T 1ut9_A 306 DYDPTFAADCLEKAEIAWQAALKHPDIYAEYTPGSGGPGGGPYND--DYVGDEFYWAACELYVTTGKDEYKNYLMN 379 (609)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHCTTCCBCCCCSSSSCBSCCCCB--SCCHHHHHHHHHHHHHHHCCHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCcccccccccccCccCCCCCCC--CCcccHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 566555555444444432 111 00 11232 33 45566778999999999988764
No 60
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=20.76 E-value=3e+02 Score=25.83 Aligned_cols=68 Identities=19% Similarity=0.256 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhC--cHHHHHHHHHHHHHHHH----h-cCC--CCCccccchhh----HHHHHHHHHHHhCCHHHHHHHH
Q 022382 177 VTLTLAKAAEVFG--EKEFLQAAVDAGEVVWK----R-GLL--KRVGICHGISG----NTYVFLSLYRLTGNVEYLYRAK 243 (298)
Q Consensus 177 i~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~----~-~~~--~~~~lCHG~aG----~~~~l~~l~~~~~~~~~~~~~~ 243 (298)
.+-+++.+..+++ |+.|.+...++.+.+++ . +.. ...+=..+.+| .+..-..|++.||++.|++.+.
T Consensus 156 ~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~ 235 (614)
T 1g87_A 156 TAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAGYTAASGYYSSSSFYDDLSWAAVWLYLATNDSTYLDKAE 235 (614)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCCTTTTTSCCSCSHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCcCCcCCCCchhHHHHHHHHHHHHhCCHHHHHHHH
Confidence 3445666666765 56665555444444443 2 111 01111122333 4566677899999999998876
Q ss_pred H
Q 022382 244 A 244 (298)
Q Consensus 244 ~ 244 (298)
.
T Consensus 236 ~ 236 (614)
T 1g87_A 236 S 236 (614)
T ss_dssp H
T ss_pred H
Confidence 4
Done!